Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_000011845.1	Streptococcus thermophilus CNRZ1066	CNRZ1066	SAMN02603344	-	-	-	0	0	34	28	44.05
2	GCA_035758325.1	Streptococcus thermophilus	SCB0351	SAMN39326816	2013-09-10	China:Guangdong	-	46	0	34	28	44.05
3	GCA_035818935.1	Streptococcus thermophilus	SIT-20.S	SAMN38454960	2017-06-23	China:Yunan	-	46	0	34	32	46.69
4	GCA_001685375.1	Streptococcus thermophilus	CS8	SAMN05281844	2015	China: Yunnan	-	47	0	34	27	43.42
5	GCA_025739325.1	Streptococcus thermophilus	CNRZ1151	SAMN16933238	1995	Ireland	-	126	0	37	29	47.01
6	GCA_025186555.1	Streptococcus thermophilus	CIRM-BIA 1122	SAMN10365664	1979	France	-	130	0	33	33	46.67
7	GCA_903891195.1	Streptococcus thermophilus	-	SAMEA6957282	1979	France	-	130	0	33	29	43.93
8	GCA_025187405.1	Streptococcus thermophilus	CIRM-BIA 29	SAMN10365639	1960	Netherlands	-	133	0	37	33	49.58
9	GCA_903886205.1	Streptococcus thermophilus	-	SAMEA6957290	1960	Netherlands	-	133	0	37	29	47.01
10	GCA_025186945.1	Streptococcus thermophilus	CIRM-BIA 1123	SAMN10365654	1975	France	-	134	0	34	33	47.38
11	GCA_019449915.1	Streptococcus thermophilus	Brie28	SAMN19136587	2020-11-09	Ireland	-	135	0	34	33	47.38
12	GCA_025187445.1	Streptococcus thermophilus	CIRM-BIA 1364	SAMN10365636	1995	France	-	140	0	34	33	47.38
13	GCA_036923315.1	Streptococcus thermophilus	TCI633	SAMN39973063	2016-03-24	Taiwan	Homo sapiens	144	0	34	28	44.05
14	GCA_039783195.1	Streptococcus thermophilus	90730	SAMN16933235	1995	Ireland	-	148	0	34	29	44.69
15	GCA_039784985.1	Streptococcus thermophilus	4147	SAMN16933253	1996	Ireland	-	149	0	34	29	44.69
16	GCA_001514435.1	Streptococcus thermophilus	S9	SAMN04384202	2013	China	-	152	0	34	29	44.69
17	GCA_025187185.1	Streptococcus thermophilus	CIRM-BIA 1116	SAMN10365649	1973	France	-	154	0	34	33	47.38
18	GCA_903891105.1	Streptococcus thermophilus	-	SAMEA6957280	1963	France	-	154	0	34	29	44.69
19	GCA_009741815.1	Streptococcus thermophilus	ST_AVK	SAMN13198391	-	-	-	165	0	34	32	46.69
20	GCA_025187545.1	Streptococcus thermophilus	CIRM-BIA 16	SAMN10365632	1954	France	-	212	0	37	33	49.58
21	GCA_903884415.1	Streptococcus thermophilus	-	SAMEA6957285	1954	France	-	212	0	37	29	47.01
22	GCA_028864795.1	Streptococcus thermophilus	TCI633	SAMN31857476	2013-11-11	Taiwan: Taipei	Homo sapiens	303	0	34	25	42.20
23	GCA_039781665.1	Streptococcus thermophilus	4052	SAMN16933229	1995	Ireland	-	319	0	26	29	38.95
24	GCA_025187235.1	Streptococcus thermophilus	CIRM-BIA 67	SAMN10365647	1971	France	-	434	0	21	32	38.28
25	GCA_025187265.1	Streptococcus thermophilus	CIRM-BIA 65	SAMN10365646	1971	France	-	434	0	21	32	38.28
26	GCA_039783785.1	Streptococcus thermophilus	CNRZ887	SAMN16933249	1995	Ireland	-	434	0	21	28	35.00
27	GCA_903886475.1	Streptococcus thermophilus	-	SAMEA6957296	1971	France	-	434	0	21	28	35.00
28	GCA_903960675.1	Streptococcus thermophilus	-	SAMEA6957297	1971	France	-	434	0	21	27	34.21
29	GCA_025187015.1	Streptococcus thermophilus	CIRM-BIA 2101	SAMN10365652	1975	Germany	-	435	0	21	32	38.28
30	GCA_025187645.1	Streptococcus thermophilus	CIRM-BIA 1056	SAMN10365627	1990	Indonesia	-	435	0	21	32	38.28
31	GCA_903891305.1	Streptococcus thermophilus	-	SAMEA6957288	1975	Germany	-	435	0	21	28	35.00
32	GCA_025187275.1	Streptococcus thermophilus	CIRM-BIA 36	SAMN10365645	1971	France	-	436	0	21	32	38.28
33	GCA_903886385.1	Streptococcus thermophilus	-	SAMEA6957294	1971	France	-	436	0	21	28	35.00
34	GCA_025186965.1	Streptococcus thermophilus	CIRM-BIA 23	SAMN10365655	1958	France	-	483	0	26	33	42.01
35	GCA_903886195.1	Streptococcus thermophilus	-	SAMEA6957289	1955	France	-	483	0	26	29	38.95
36	GCA_000011825.1	Streptococcus thermophilus LMG 18311	LMG 18311	SAMN02604079	-	-	-	497	0	37	29	47.01
37	GCA_025187195.1	Streptococcus thermophilus	CIRM-BIA 1117	SAMN10365648	1973	France	-	506	0	21	32	38.28
38	GCA_025739385.1	Streptococcus thermophilus	4067	SAMN16933230	1996	Ireland	-	683	0	22	28	35.61
39	GCA_020076015.1	Streptococcus thermophilus	CF13_14	SAMN15078605	2018-03-12	USA:MD	Homo sapiens	693	0	22	34	40.50
40	GCA_039783225.1	Streptococcus thermophilus	CNRZ760	SAMN16933237	1995	Ireland	-	693	0	22	30	37.20
41	GCA_025186565.1	Streptococcus thermophilus	CIRM-BIA 1049	SAMN10365665	1979	France	-	695	0	22	34	40.50
42	GCA_025186625.1	Streptococcus thermophilus	CIRM-BIA 1048	SAMN10365662	1978	Bulgaria	-	695	0	22	33	39.66
43	GCA_903890905.1	Streptococcus thermophilus	-	SAMEA6957275	1978	Bulgaria	-	695	0	22	29	36.40
44	GCA_903890925.1	Streptococcus thermophilus	-	SAMEA6957276	1978	France	-	695	0	22	30	37.20
45	GCA_020075875.1	Streptococcus thermophilus	CF1_14	SAMN06464116	2016-10-15	USA:MD	Homo sapiens	697	0	21	33	39.12
46	GCA_025187145.1	Streptococcus thermophilus	CIRM-BIA 772	SAMN10365650	1973	France	-	709	0	22	32	38.83
47	GCA_903886635.1	Streptococcus thermophilus	-	SAMEA6957298	1963	France	-	709	0	22	28	35.61
48	GCA_025186525.1	Streptococcus thermophilus	CIRM-BIA 1121	SAMN10365663	1978	France	-	711	0	27	32	41.87
49	GCA_903891135.1	Streptococcus thermophilus	-	SAMEA6957281	1978	France	-	711	0	27	28	38.90
50	GCA_006539425.1	Streptococcus thermophilus	-	SAMD00097243	-	-	-	714	0	26	32	41.23
51	GCA_002443035.1	Streptococcus thermophilus	B59671	SAMN07369158	-	USA:ERRC at Wyndmoor, PA	-	716	0	26	29	38.95
52	GCA_025186665.1	Streptococcus thermophilus	CIRM-BIA 1119	SAMN10365661	1978	Bulgaria	-	718	0	23	34	41.05
53	GCA_029983065.1	Streptococcus thermophilus	FUA329	SAMN31530271	2020-05-27	China:Lianyungang	Homo sapiens	718	0	26	32	41.23
54	GCA_013307265.1	Streptococcus thermophilus	CS9	SAMN09536719	2014	China	-	719	0	26	30	39.70
55	GCA_027947275.1	Streptococcus thermophilus	TSGB 4240	SAMN32339319	2020-07	Turkey	-	719	0	17	34	38.01
56	GCA_039783105.1	Streptococcus thermophilus	90729	SAMN16933234	1995	Ireland	-	719	0	22	30	37.20
57	GCA_039784895.1	Streptococcus thermophilus	ST55	SAMN16933245	1995	Ireland	-	719	0	26	30	39.70
58	GCA_025186785.1	Streptococcus thermophilus	CIRM-BIA 1050	SAMN10365657	1973	Greece	-	721	0	25	33	41.40
59	GCA_903890945.1	Streptococcus thermophilus	-	SAMEA6957277	1973	Greece	-	721	0	25	29	38.29
60	GCA_039782795.1	Streptococcus thermophilus	90728	SAMN16933233	1995	Ireland	-	722	0	23	30	37.80
61	GCA_025132955.1	Streptococcus thermophilus	1047	SAMN10365132	2007	Kenya	-	724	0	26	33	42.01
62	GCA_025186725.1	Streptococcus thermophilus	CIRM-BIA 1124	SAMN10365660	1978	France	-	724	0	26	33	42.01
63	GCA_025186805.1	Streptococcus thermophilus	CIRM-BIA 1047	SAMN10365659	1978	France	-	724	0	26	33	42.01
64	GCA_903890825.1	Streptococcus thermophilus	-	SAMEA6957274	1978	France	-	724	0	26	29	38.95
65	GCA_038049945.1	Streptococcus thermophilus	TCI125	SAMN40642328	2013-11	Taiwan:Taipei	-	725	0	26	29	38.95
66	GCA_025187565.1	Streptococcus thermophilus	CIRM-BIA 1057	SAMN10365631	1991	France	-	726	0	26	33	42.01
67	GCA_040883385.1	Streptococcus thermophilus	AM-ST-89	SAMN42007031	-	-	-	727	0	25	34	42.20
68	GCA_045159855.1	Streptococcus thermophilus	MM8	SAMN16933250	2017	Ireland	-	727	0	26	28	38.21
69	GCA_021229135.1	Streptococcus thermophilus	8253 (205)	SAMN23827835	2001	Bulgaria: Balkan Mountains	-	728	0	24	33	40.80
70	GCA_025122495.1	Streptococcus thermophilus	CIRM-BIA 1131	SAMN10365212	1987	Greece	-	728	0	24	33	40.80
71	GCA_039784855.1	Streptococcus thermophilus	CNRZ1202	SAMN16933239	1995	Ireland	-	728	0	25	29	38.29
72	GCA_900094135.1	Streptococcus thermophilus	ACA-DC 2	SAMEA4355128	-	-	-	728	0	28	29	40.31
73	GCA_039784805.1	Streptococcus thermophilus	AVA116	SAMN16933236	1996	Ireland	-	729	0	28	29	40.31
74	GCA_025187585.1	Streptococcus thermophilus	CIRM-BIA 1860	SAMN10365630	1979	Austria	-	731	0	23	33	40.22
75	GCA_025187705.1	Streptococcus thermophilus	CIRM-BIA 1125	SAMN10365625	1987	Greece	-	732	0	23	32	39.41
76	GCA_903891205.1	Streptococcus thermophilus	-	SAMEA6957283	1987	Greece	-	732	0	23	28	36.24
77	GCA_013370965.1	Streptococcus thermophilus	CBC-S77	SAMN15249454	1977-05-02	Bulgaria: West Rhode Mountain	-	736	0	30	33	44.60
78	GCA_019449675.1	Streptococcus thermophilus	Vach57	SAMN19116181	2020-11-09	Ireland	-	738	0	23	33	40.22
79	GCA_041514265.1	Streptococcus thermophilus	S24735	SAMN18478710	2019	Switzerland	-	739	0	23	27	35.47
80	GCA_027947245.1	Streptococcus thermophilus	TSGB 4251	SAMN32339323	2020-07	Turkey	-	740	0	23	33	40.22
81	GCA_027947375.1	Streptococcus thermophilus	TSGB 4231	SAMN32339314	2020-07	Turkey	-	740	0	23	33	40.22
82	GCA_028463905.1	Streptococcus thermophilus	strain TSGB 4141	SAMN32902037	2020-07	Turkey	-	740	0	23	29	37.01
83	GCA_020076365.1	Streptococcus thermophilus	DS51_14	SAMN15078775	2019-03-12	USA:MD	Homo sapiens	741	0	27	33	42.64
84	GCA_027947295.1	Streptococcus thermophilus	TSGB 4236	SAMN32339317	2020-07	Turkey	-	741	0	21	32	38.28
85	GCA_000182875.1	Streptococcus thermophilus ND03	ND03	SAMN02603938	-	-	-	742	0	22	29	36.40
86	GCA_001266475.1	Streptococcus thermophilus	KLDS3.1012	SAMN03957073	2009-02-02	China: Inner Mongolia	-	742	0	22	29	36.40
87	GCA_002012365.1	Streptococcus thermophilus	APC151	SAMN06349996	2015-02-13	Ireland	fish	742	0	22	29	36.40
88	GCA_002914925.1	Streptococcus thermophilus	BT01	SAMN07187786	2017	Italy	-	742	0	35	32	47.42
89	GCA_003129655.1	Streptococcus thermophilus	KU30	SAMN09099014	2009-10-01	China:Hebei	-	742	0	22	32	38.83
90	GCA_019450095.1	Streptococcus thermophilus	Moz76	SAMN19836723	2020-11-09	Ireland	-	742	0	35	33	48.10
91	GCA_020075965.1	Streptococcus thermophilus	DS61_14	SAMN15078830	2019-03-12	USA:MD	Homo sapiens	742	0	35	33	48.10
92	GCA_020076045.1	Streptococcus thermophilus	CF5_14	SAMN15078648	2018-03-12	USA:MD	Homo sapiens	742	0	35	32	47.42
93	GCA_020076065.1	Streptococcus thermophilus	CF8_14	SAMN15078656	2018-03-12	USA:MD	Homo sapiens	742	0	35	33	48.10
94	GCA_020076115.1	Streptococcus thermophilus	CF4_14	SAMN15078639	2018-03-12	USA:MD	Homo sapiens	742	0	35	32	47.42
95	GCA_020076145.1	Streptococcus thermophilus	DS45_14	SAMN15078736	2019-03-12	USA:MD	Homo sapiens	742	0	35	33	48.10
96	GCA_020844005.1	Streptococcus thermophilus	4078	SAMN16933231	1996	Ireland	-	742	0	22	29	36.40
97	GCA_024334065.1	Streptococcus thermophilus	CH8	SAMN07809268	2005-02-07	Denmark	-	742	0	26	28	38.21
98	GCA_024665315.1	Streptococcus thermophilus	TH-4	SAMN29862205	-	-	Homo sapiens	742	0	35	28	44.82
99	GCA_025187345.1	Streptococcus thermophilus	CIRM-BIA 30	SAMN10365642	1963	France	-	742	0	22	32	38.83
100	GCA_025187385.1	Streptococcus thermophilus	CIRM-BIA 19	SAMN10365641	1963	France	-	742	0	25	33	41.40