GCA_000154125.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCLBNEHHE_1 (original name was: gnl|Prokka|CLBNEHHE_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RRE-containing	704,517	724,867

gnlProkkaCLBNEHHE_23 (original name was: gnl|Prokka|CLBNEHHE_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	arylpolyene	119,342	166,946	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RRE-containing	704,517	724,867
Region 21.1	arylpolyene	119,342	166,946	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaCLBNEHHE_2 (original name was: gnl|Prokka|CLBNEHHE_2); gnlProkkaCLBNEHHE_3 (original name was: gnl|Prokka|CLBNEHHE_3); gnlProkkaCLBNEHHE_4 (original name was: gnl|Prokka|CLBNEHHE_4); gnlProkkaCLBNEHHE_5 (original name was: gnl|Prokka|CLBNEHHE_5); gnlProkkaCLBNEHHE_6 (original name was: gnl|Prokka|CLBNEHHE_6); gnlProkkaCLBNEHHE_7 (original name was: gnl|Prokka|CLBNEHHE_7); gnlProkkaCLBNEHHE_8 (original name was: gnl|Prokka|CLBNEHHE_8); gnlProkkaCLBNEHHE_9 (original name was: gnl|Prokka|CLBNEHHE_9); gnlProkkaCLBNEHHE_10 (original name was: gnl|Prokka|CLBNEHHE_10); gnlProkkaCLBNEHHE_11 (original name was: gnl|Prokka|CLBNEHHE_11); gnlProkkaCLBNEHHE_12 (original name was: gnl|Prokka|CLBNEHHE_12); gnlProkkaCLBNEHHE_13 (original name was: gnl|Prokka|CLBNEHHE_13); gnlProkkaCLBNEHHE_14 (original name was: gnl|Prokka|CLBNEHHE_14); gnlProkkaCLBNEHHE_15 (original name was: gnl|Prokka|CLBNEHHE_15); gnlProkkaCLBNEHHE_16 (original name was: gnl|Prokka|CLBNEHHE_16); gnlProkkaCLBNEHHE_17 (original name was: gnl|Prokka|CLBNEHHE_17); gnlProkkaCLBNEHHE_18 (original name was: gnl|Prokka|CLBNEHHE_18); gnlProkkaCLBNEHHE_19 (original name was: gnl|Prokka|CLBNEHHE_19); gnlProkkaCLBNEHHE_22 (original name was: gnl|Prokka|CLBNEHHE_22); gnlProkkaCLBNEHHE_24 (original name was: gnl|Prokka|CLBNEHHE_24); gnlProkkaCLBNEHHE_25 (original name was: gnl|Prokka|CLBNEHHE_25); gnlProkkaCLBNEHHE_26 (original name was: gnl|Prokka|CLBNEHHE_26); gnlProkkaCLBNEHHE_27 (original name was: gnl|Prokka|CLBNEHHE_27); gnlProkkaCLBNEHHE_28 (original name was: gnl|Prokka|CLBNEHHE_28); gnlProkkaCLBNEHHE_29 (original name was: gnl|Prokka|CLBNEHHE_29); gnlProkkaCLBNEHHE_30 (original name was: gnl|Prokka|CLBNEHHE_30); gnlProkkaCLBNEHHE_31 (original name was: gnl|Prokka|CLBNEHHE_31); gnlProkkaCLBNEHHE_32 (original name was: gnl|Prokka|CLBNEHHE_32)

Compact view

gnlProkkaCLBNEHHE_1 - Region 1 - RRE-containing

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Location: 704,517 - 724,867 nt. (total: 20,351 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCLBNEHHE_23 - Region 1 - arylpolyene

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Location: 119,342 - 166,946 nt. (total: 47,605 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg21_110

AMP-binding (46..335): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)