GCA_000154385.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFPMJAHEA_1 (original name was: gnl|Prokka|FPMJAHEA_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	ranthipeptide	438,197	459,862

gnlProkkaFPMJAHEA_3 (original name was: gnl|Prokka|FPMJAHEA_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	cyclic-lactone-autoinducer	127,440	148,027

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	ranthipeptide	438,197	459,862
Region 3.1	cyclic-lactone-autoinducer	127,440	148,027

No secondary metabolite regions were found in these records:: gnlProkkaFPMJAHEA_2 (original name was: gnl|Prokka|FPMJAHEA_2); gnlProkkaFPMJAHEA_4 (original name was: gnl|Prokka|FPMJAHEA_4); gnlProkkaFPMJAHEA_5 (original name was: gnl|Prokka|FPMJAHEA_5); gnlProkkaFPMJAHEA_6 (original name was: gnl|Prokka|FPMJAHEA_6); gnlProkkaFPMJAHEA_7 (original name was: gnl|Prokka|FPMJAHEA_7); gnlProkkaFPMJAHEA_8 (original name was: gnl|Prokka|FPMJAHEA_8); gnlProkkaFPMJAHEA_9 (original name was: gnl|Prokka|FPMJAHEA_9); gnlProkkaFPMJAHEA_10 (original name was: gnl|Prokka|FPMJAHEA_10); gnlProkkaFPMJAHEA_11 (original name was: gnl|Prokka|FPMJAHEA_11); gnlProkkaFPMJAHEA_12 (original name was: gnl|Prokka|FPMJAHEA_12); gnlProkkaFPMJAHEA_13 (original name was: gnl|Prokka|FPMJAHEA_13); gnlProkkaFPMJAHEA_14 (original name was: gnl|Prokka|FPMJAHEA_14); gnlProkkaFPMJAHEA_15 (original name was: gnl|Prokka|FPMJAHEA_15); gnlProkkaFPMJAHEA_16 (original name was: gnl|Prokka|FPMJAHEA_16); gnlProkkaFPMJAHEA_17 (original name was: gnl|Prokka|FPMJAHEA_17); gnlProkkaFPMJAHEA_18 (original name was: gnl|Prokka|FPMJAHEA_18); gnlProkkaFPMJAHEA_19 (original name was: gnl|Prokka|FPMJAHEA_19); gnlProkkaFPMJAHEA_20 (original name was: gnl|Prokka|FPMJAHEA_20); gnlProkkaFPMJAHEA_21 (original name was: gnl|Prokka|FPMJAHEA_21); gnlProkkaFPMJAHEA_22 (original name was: gnl|Prokka|FPMJAHEA_22); gnlProkkaFPMJAHEA_23 (original name was: gnl|Prokka|FPMJAHEA_23); gnlProkkaFPMJAHEA_24 (original name was: gnl|Prokka|FPMJAHEA_24); gnlProkkaFPMJAHEA_25 (original name was: gnl|Prokka|FPMJAHEA_25)

Compact view

gnlProkkaFPMJAHEA_1 - Region 1 - ranthipeptide

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Location: 438,197 - 459,862 nt. (total: 21,666 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

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gnlProkkaFPMJAHEA_3 - Region 1 - cyclic-lactone-autoinducer