GCA_000160855.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDHBKOINA_47 (original name was: gnl|Prokka|DHBKOINA_47)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	NRPS	1	23,024

Region	Type	From	To	Most similar known cluster	Similarity
Region 24.1	NRPS	1	23,024

No secondary metabolite regions were found in these records:: gnlProkkaDHBKOINA_24 (original name was: gnl|Prokka|DHBKOINA_24); gnlProkkaDHBKOINA_25 (original name was: gnl|Prokka|DHBKOINA_25); gnlProkkaDHBKOINA_26 (original name was: gnl|Prokka|DHBKOINA_26); gnlProkkaDHBKOINA_27 (original name was: gnl|Prokka|DHBKOINA_27); gnlProkkaDHBKOINA_28 (original name was: gnl|Prokka|DHBKOINA_28); gnlProkkaDHBKOINA_29 (original name was: gnl|Prokka|DHBKOINA_29); gnlProkkaDHBKOINA_30 (original name was: gnl|Prokka|DHBKOINA_30); gnlProkkaDHBKOINA_31 (original name was: gnl|Prokka|DHBKOINA_31); gnlProkkaDHBKOINA_32 (original name was: gnl|Prokka|DHBKOINA_32); gnlProkkaDHBKOINA_33 (original name was: gnl|Prokka|DHBKOINA_33); gnlProkkaDHBKOINA_34 (original name was: gnl|Prokka|DHBKOINA_34); gnlProkkaDHBKOINA_35 (original name was: gnl|Prokka|DHBKOINA_35); gnlProkkaDHBKOINA_36 (original name was: gnl|Prokka|DHBKOINA_36); gnlProkkaDHBKOINA_37 (original name was: gnl|Prokka|DHBKOINA_37); gnlProkkaDHBKOINA_38 (original name was: gnl|Prokka|DHBKOINA_38); gnlProkkaDHBKOINA_39 (original name was: gnl|Prokka|DHBKOINA_39); gnlProkkaDHBKOINA_40 (original name was: gnl|Prokka|DHBKOINA_40); gnlProkkaDHBKOINA_41 (original name was: gnl|Prokka|DHBKOINA_41); gnlProkkaDHBKOINA_42 (original name was: gnl|Prokka|DHBKOINA_42); gnlProkkaDHBKOINA_43 (original name was: gnl|Prokka|DHBKOINA_43); gnlProkkaDHBKOINA_44 (original name was: gnl|Prokka|DHBKOINA_44); gnlProkkaDHBKOINA_45 (original name was: gnl|Prokka|DHBKOINA_45); gnlProkkaDHBKOINA_46 (original name was: gnl|Prokka|DHBKOINA_46); gnlProkkaDHBKOINA_48 (original name was: gnl|Prokka|DHBKOINA_48); gnlProkkaDHBKOINA_49 (original name was: gnl|Prokka|DHBKOINA_49)

Compact view

gnlProkkaDHBKOINA_47 - Region 1 - NRPS

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Location: 1 - 23,024 nt. (total: 23,024 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 0 - 23024:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Ala)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg24_1

Search NORINE for peptide: strict or relaxed

AMP-binding (8..390): Ala

nrpys: Ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVTSMALVYK
Nearest Stachelhaus code(s):: Ala DVFSVALVYK (71% 8Å match)
Stachelhaus code match:: 80% (moderate)