Select genomic region:
Overview
1.1
1.2
1.3
1.4
1.5

### Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaICOPOGPD_1 (original name was: gnl|Prokka|ICOPOGPD_1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1 | RiPP-like | 264,373 | 276,469 | quinolidomicin A | Polyketide | 3%
Region 2 | lanthipeptide-class-ii,RaS-RiPP | 742,810 | 776,926 | salivaricin 9 | RiPP:Lanthipeptide | 100%
Region 3 | T3PKS | 1,579,285 | 1,620,451 |
Region 4 | RiPP-like | 1,782,054 | 1,792,350 |
Region 5 | RiPP-like | 1,875,773 | 1,894,610 |

gnlProkkaICOPOGPD_1 - Region 1 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 264,373 - 276,469 nt. (total: 12,097 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
gnlProkkaICOPOGPD_1 - Region 2 - RaS-RiPP,lanthipeptide-class-ii
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 742,810 - 776,926 nt. (total: 34,117 nt) Show pHMM detection rules used
lanthipeptide-class-ii: cds(LANC_like and DUF4135)
RaS-RiPP: (PF04055 and TIGR01716)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Lanthipeptides
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Lanthipeptide predictions
Shows the possible core peptides for each biosynthetic enzyme.
Includes CompaRiPPson results for any available databases, with a detailed explanation here.

#### Lanthipeptide(s) for ctg1_598

ctg1_597
Leader:
MKSTNNQSISEIAAVNSLQEVSMEELDQIIGA
Core:
G N G V V L T L T H E C N L A T W T K K L K C C
Core with dehydrations:
G N G V V L Dhb L Dhb H E Cys N L A Dhb W Dhb K K L K Cys Cys

#### MIBiG 3.1 matches for ctg1_597

23.3% BGC0002110 (QKV49893.1): Lanthipeptide: birimositide
2
N G V V L T L T H E C
12
N G T L T E C
15
N G G W C T L T K E C
25
21.4% BGC0000517 (BAB04173.1): Lanthipeptide: haloduracin β or haloduracin α
3
G V V L T L T H E C
12
G T L T E C
14
G A Y C T L T V E C
23

#### antiSMASH-DB 4.0 matches for ctg1_597

100.0% NC_015760.1 and 5 others:
NZ_CAJHJN010000010.1 Lanthipeptides: JMZ68_RS09030_lanthipeptide NZ_JACLQK010000036.1 Lanthipeptides: H7U04_RS11500_lanthipeptide NZ_JADPEB010000003.1 Lanthipeptides: I4U26_RS02800_lanthipeptide NZ_JAQCST010000021.1 Lanthipeptides: PGZ09_RS09470_lanthipeptide NZ_OU540596.1 Lanthipeptides: JQ838_RS05640_lanthipeptide
Lanthipeptides: SALIVB_RS03310_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V V L T L T H E C N L A T W T K K L K C C
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
58.3% NZ_CP083176.1 and 4 others:
NZ_JABUHD010000002.1 Lanthipeptides: HRR08_RS05415_lanthipeptide NZ_LSLF01000001.1 Lanthipeptides: AXE72_RS04025_lanthipeptide NZ_PNHB01000001.1 Lanthipeptides: CJ210_RS02800_lanthipeptide NZ_QJVA01000001.1 Lanthipeptides: D0T19_RS02755_lanthipeptide
Lanthipeptides: K9E37_RS06280_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G+G V+ T L T H E C++ T W L C C
1
G D G V M H T L T H E C H M N T W Q F L L T C C
24
54.2% NZ_CP084014.1 and 6 others:
NZ_CP084014.1 Lanthipeptides: LCQ72_RS00100_lanthipeptide NZ_CP084014.1 Lanthipeptides: LCQ72_RS00095_lanthipeptide NZ_CP094679.1 Lanthipeptides: K5I24_RS13105_lanthipeptide NZ_JAQEYW010000015.1 Lanthipeptides: PG422_RS12415_lanthipeptide NZ_JAQEYW010000015.1 Lanthipeptides: PG422_RS12410_lanthipeptide NZ_JAQEYW010000015.1 Lanthipeptides: PG422_RS12405_lanthipeptide
Lanthipeptides: LCQ72_RS00105_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V+ T++H E C N+ T W C C
1
G N G V L K T I S H E C N M N T W Q F L F T C C
24
with 62 more sequence matches
52.0% NZ_CP018188.1 and 17 others:
NZ_CP018188.1 Lanthipeptides: BSR19_RS11175_lanthipeptide NZ_CP066093.1 Lanthipeptides: I6I02_RS07300_lanthipeptide NZ_CP066093.1 Lanthipeptides: I6I02_RS07295_lanthipeptide NZ_JALDUD010000010.1 Lanthipeptides: M1G10_RS09705_lanthipeptide NZ_JALDUD010000010.1 Lanthipeptides: M1G10_RS09700_lanthipeptide NZ_JAQDVH010000019.1 Lanthipeptides: PGU04_RS09300_lanthipeptide NZ_JAQDVH010000019.1 Lanthipeptides: PGU04_RS09295_lanthipeptide NZ_JAQDVH010000019.1 Lanthipeptides: PGU04_RS09300_lanthipeptide NZ_JAQDVH010000019.1 Lanthipeptides: PGU04_RS09295_lanthipeptide NZ_JAQMJT010000006.1 Lanthipeptides: PNU26_RS06585_lanthipeptide NZ_JAQMJT010000006.1 Lanthipeptides: PNU26_RS06580_lanthipeptide NZ_JAQMJT010000006.1 Lanthipeptides: PNU26_RS06585_lanthipeptide NZ_JAQMJT010000006.1 Lanthipeptides: PNU26_RS06580_lanthipeptide NZ_KV832031.1 Lanthipeptides: HMPREF2637_RS05120_lanthipeptide NZ_KV832031.1 Lanthipeptides: HMPREF2637_RS05115_lanthipeptide NZ_PKIA01000004.1 Lanthipeptides: CYK22_RS04335_lanthipeptide NZ_PKIA01000004.1 Lanthipeptides: CYK22_RS04330_lanthipeptide
Lanthipeptides: BSR19_RS11180_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V T++H E C+L T W C C
1
G N G V F K T I S H E C H L N T W A F L A T C C
24
52.0% NZ_CP026729.1: Lanthipeptides: BKKJ1_RS07010_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V V T++H E C N+ +W C C
1
G N G V V T T I S H E C N M N S W Q F L F T C C
24
50.0% NZ_AP025017.1: Lanthipeptides: MANAM107_RS05920_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
N G V+ T++H E C+L T W C C
1
N G V I T T I S H E C H L N T W A F A F T C C
23
50.0% NZ_CP031746.1: Lanthipeptides: DCC27_RS08165_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
+G V+ T L T H E C++ +W L C C
1
D G V I S T L T H E C H M N S W Q G L L T C C
23
50.0% NZ_CP072384.1: Lanthipeptides: J5A65_RS01395_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G G V V T+T H E C++ +W C C
1
G R G V V P T V T H E C H M N S W Q W F F G C C
24
50.0% NZ_QTVL01000002.1 and 5 others:
NZ_QTVL01000002.1 Lanthipeptides: DWZ44_RS04150_lanthipeptide NZ_QTZB01000015.1 Lanthipeptides: DXC15_RS14340_lanthipeptide NZ_QTZB01000015.1 Lanthipeptides: DXC15_RS14335_lanthipeptide NZ_QUKU01000003.1 Lanthipeptides: DXC27_RS02940_lanthipeptide NZ_QUKU01000003.1 Lanthipeptides: DXC27_RS02935_lanthipeptide
Lanthipeptides: DWZ44_RS04155_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G+G V T++H E C N+ T W C C
1
G D G V F R T I S H E C N M N T W Q F I F T C C
24
48.1% NZ_CP037940.1: Lanthipeptides: EQG49_RS07315_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G+G V+ T L T H E C + T+ L C C
4
G S G V I K T L T H E C K M N T Y Q A I L T C C
27
48.0% NZ_CP045267.1 and 1 other:
NZ_CP045267.1 Lanthipeptides: FDZ14_RS00155_lanthipeptide
Lanthipeptides: FDZ14_RS00155_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G+G V V T T E C L T+ C C
1
G D G V V K T A T S E C Y L G T F A--F A C C
22
48.0% NZ_GL882519.1: Lanthipeptides: HMPREF9056_RS03330_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V T L+H E C++ +W C C
1
G N G V Y Y T L S H E C H M N S W Q F I F T C C
24
48.0% NZ_LT732526.1 and 1 other:
NZ_LT732526.1 Lanthipeptides: BQ9856_RS23075_lanthipeptide
Lanthipeptides: BQ9856_RS23080_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V+ T++H E C + T W C C
1
G N G V I K T I S H E C A M N T W Q F I F T C C
24
48.0% NZ_MSRJ01000005.1: Lanthipeptides: BKH06_RS03750_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V T T H E C N ++ C C
1
G N G V F Y T F T H E C N T N S F Y V A F T C C
24
46.2% NZ_ALSD01000046.1 and 49 others:
NZ_CAAHGW010000010.1 Lanthipeptides: E9435_RS08890_lanthipeptide NZ_CAAHHE010000002.1 Lanthipeptides: E9499_RS02935_lanthipeptide NZ_CAAHHF010000009.1 Lanthipeptides: E9478_RS08685_lanthipeptide NZ_CAAHHF010000009.1 Lanthipeptides: E9478_RS08680_lanthipeptide NZ_CAAHHN010000003.1 Lanthipeptides: E9502_RS05700_lanthipeptide NZ_CAAHHU010000009.1 Lanthipeptides: E9510_RS08730_lanthipeptide NZ_CAAHHU010000009.1 Lanthipeptides: E9510_RS08725_lanthipeptide NZ_CAAHHW010000012.1 Lanthipeptides: E9525_RS08980_lanthipeptide NZ_CAAHHW010000012.1 Lanthipeptides: E9525_RS08975_lanthipeptide NZ_CAAHIB010000001.1 Lanthipeptides: E9539_RS01070_lanthipeptide NZ_CAAHIV010000024.1 Lanthipeptides: E9612_RS09265_lanthipeptide NZ_CAAHIV010000024.1 Lanthipeptides: E9612_RS09260_lanthipeptide NZ_CAAHKK010000019.1 Lanthipeptides: E9649_RS08765_lanthipeptide NZ_CAAHKK010000019.1 Lanthipeptides: E9649_RS08760_lanthipeptide NZ_CAAHKP010000014.1 Lanthipeptides: E9652_RS08915_lanthipeptide NZ_CAAHKP010000014.1 Lanthipeptides: E9652_RS08910_lanthipeptide NZ_CAAHKQ010000003.1 Lanthipeptides: E9664_RS02170_lanthipeptide NZ_CAAHKY010000014.1 Lanthipeptides: E9668_RS09655_lanthipeptide NZ_CAAHLP010000002.1 Lanthipeptides: E9684_RS03455_lanthipeptide NZ_CAAHLP010000002.1 Lanthipeptides: E9684_RS03450_lanthipeptide NZ_CAAHQE010000012.1 Lanthipeptides: E9931_RS08825_lanthipeptide NZ_CAAHQE010000012.1 Lanthipeptides: E9931_RS08820_lanthipeptide NZ_CAAHRY010000002.1 Lanthipeptides: E9986_RS03170_lanthipeptide NZ_CAAIES010000002.1 Lanthipeptides: FAH15_RS02470_lanthipeptide NZ_CAAIIA010000012.1 Lanthipeptides: FAH55_RS08470_lanthipeptide NZ_CAAIIA010000012.1 Lanthipeptides: FAH55_RS08465_lanthipeptide NZ_CAAIJM010000015.1 Lanthipeptides: FAI23_RS09580_lanthipeptide NZ_CAAINV010000013.1 Lanthipeptides: FAI86_RS09035_lanthipeptide NZ_CAAINV010000013.1 Lanthipeptides: FAI86_RS09030_lanthipeptide NZ_CAAIRS010000012.1 Lanthipeptides: FAK24_RS08495_lanthipeptide NZ_CAAIRS010000012.1 Lanthipeptides: FAK24_RS08490_lanthipeptide NZ_CAAJFI010000013.1 Lanthipeptides: FAP60_RS08505_lanthipeptide NZ_CAAJFI010000013.1 Lanthipeptides: FAP60_RS08500_lanthipeptide NZ_CAJHJS010000009.1 Lanthipeptides: JMX87_RS06790_lanthipeptide NZ_CAJHJS010000009.1 Lanthipeptides: JMX87_RS06785_lanthipeptide NZ_CM001076.1 Lanthipeptides: SDD27957_RS04310_lanthipeptide NZ_CM001076.1 Lanthipeptides: SDD27957_RS04305_lanthipeptide NZ_CP035426.1 Lanthipeptides: ETT73_RS02595_lanthipeptide NZ_CP035426.1 Lanthipeptides: ETT73_RS02590_lanthipeptide NZ_CP035428.1 Lanthipeptides: ETT71_RS02815_lanthipeptide NZ_CP035437.1 Lanthipeptides: ETT62_RS06680_lanthipeptide NZ_CP035437.1 Lanthipeptides: ETT62_RS06675_lanthipeptide NZ_CP035443.1 Lanthipeptides: ETT56_RS07265_lanthipeptide NZ_GL636070.1 Lanthipeptides: HMPREF9171_RS105315_lanthipeptide NZ_LR793258.1 Lanthipeptides: HV369_RS03145_lanthipeptide NZ_LR793258.1 Lanthipeptides: HV369_RS03140_lanthipeptide NZ_LS483425.1 Lanthipeptides: DQN36_RS06755_lanthipeptide NZ_LS483425.1 Lanthipeptides: DQN36_RS06750_lanthipeptide NZ_LT545678.1 Lanthipeptides: BJR96_RS07040_lanthipeptide
Lanthipeptides: SAG0161_RS120605_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
N G V T++H E C+L T W C C
3
N G V F K T I S H E C H L N T W A F L A T C C
25
46.2% NZ_CAAHKQ010000003.1: Lanthipeptides: E9664_RS02165_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
N G V T++H E C+L T W C C
3
N G V F K T I S H E C H L N T W A F L A I C C
25
46.2% NZ_CP060646.1: Lanthipeptides: H7789_RS06845_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
N G V T++H E C+L T W C C
3
N G V F K T I S H E C H L N T W A S L A T C C
25
45.8% NZ_GL985606.1: Lanthipeptides: HMPREF9062_RS00700_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V T++H E C +W C C
1
G N G V F H T I S H E C Y Y N S W A F I F T C C
24
45.8% NZ_MSRJ01000005.1: Lanthipeptides: BKH06_RS03755_lanthipeptide
3
G V V L T L T H E C N L A T W T K K L K C C
24
G V V T++H E C N+ +W C C
2
G V V T T I S H E C N M N S W Q F I F T C C
23
44.0% NZ_CP023483.1: Lanthipeptides: CNY62_RS11970_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G + T++H E C++ T W C C
1
G N G A I R T I S H E C H M N T W Q F L F T C C
24
44.0% NZ_FOZB01000002.1: Lanthipeptides: BM306_RS07850_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G+G V T++H E C++ T W C C
1
G D G V F R T I S H E C H M N T W M F I F T C C
24
44.0% NZ_JAEEGA010000010.1: Lanthipeptides: I6N95_RS15660_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V+ T++H E C++ +W C C
1
G N G V I K T I S H E C H M N S W Q W I F T C C
24
44.0% NZ_LR134406.1: Lanthipeptides: EL272_RS00695_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G G + + T H E C N T T+ C C
1
G W G S I F S F T H E C N T N T M T Q L F T C C
24
40.7% NZ_CP069183.1: Lanthipeptides: LLNCDO700_RS13730_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G+G V+ T++H E C N+ +W C C
3
G S G V I H T I S H E C N M N S W Q F V F T C C
26
40.0% NZ_JAFCGV010000005.1: Lanthipeptides: JQI09_RS04275_lanthipeptide
1
G N G V V L T L T H E C N L A T W
17
G+G V V T T E C L T+
1
G D G V V K T A T S E C Y L G T F
17
40.0% NZ_JH792236.1 and 1 other:
NZ_JH792236.1 Lanthipeptides: IIM_RS26240_lanthipeptide
Lanthipeptides: IIM_RS26245_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G+G V+ T++H E C++ +W C C
1
G S G V I K T I S H E C H M N S W Q A I F T C C
24
40.0% NZ_VDNV01000006.1: Lanthipeptides: FSV44_RS08765_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G G V+ T++H E C + +W C C
1
G G G V I Q T I S H E C R M N S W Q F L F T C C
24
38.5% NC_012470.1 and 11 others:
NZ_CABY01000005.1 Lanthipeptides: SZBHS5_RS06485_lanthipeptide NZ_CP029398.1 Lanthipeptides: DF184_RS05185_lanthipeptide NZ_CP029398.1 Lanthipeptides: DF184_RS05180_lanthipeptide NZ_CP078012.1 Lanthipeptides: KV238_RS09835_lanthipeptide NZ_CP078012.1 Lanthipeptides: KV238_RS09830_lanthipeptide NZ_JAFLMI010000009.1 Lanthipeptides: J0638_RS05350_lanthipeptide NZ_JAFLMI010000009.1 Lanthipeptides: J0638_RS05345_lanthipeptide NZ_LR738724.1 Lanthipeptides: GPW69_RS05065_lanthipeptide NZ_LR738724.1 Lanthipeptides: GPW69_RS05060_lanthipeptide NZ_VZNS01000007.1 Lanthipeptides: F6P79_RS05580_lanthipeptide NZ_VZNS01000007.1 Lanthipeptides: F6P79_RS05575_lanthipeptide
Lanthipeptides: SZO_RS04070_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
N G V T++H E C++ +W C C
3
N G V F K T I S H E C H M N S W Q F L F T C C
25
38.5% NC_013928.1 and 8 others:
NC_013928.1 Lanthipeptides: SMUNN2025_RS01700_lanthipeptide NZ_CP023477.1 Lanthipeptides: CO204_RS01885_lanthipeptide NZ_CP050270.1 Lanthipeptides: HB753_RS01090_lanthipeptide NZ_CP050270.1 Lanthipeptides: HB753_RS01080_lanthipeptide NZ_CP061071.1 Lanthipeptides: IBL27_RS01745_lanthipeptide NZ_CP061071.1 Lanthipeptides: IBL27_RS01735_lanthipeptide NZ_JALDUN010000005.1 Lanthipeptides: M1F82_RS07575_lanthipeptide NZ_JALDUN010000005.1 Lanthipeptides: M1F82_RS07565_lanthipeptide
Lanthipeptides: SMUNN2025_RS01710_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G G V T++H E C +W C C
2
G K G A V G T I S H E C R Y N S W A F L A T C C
25
38.5% NZ_CP023477.1: Lanthipeptides: CO204_RS01875_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G G V T++H E C +W C C
2
G K G T V G T I S H E C R Y N S W A F L A T C C
25
38.5% NZ_CP117876.1: Lanthipeptides: PQ460_RS01735_lanthipeptide
1
G N G V V L T L T H E C N L A T
16
G+G V V T T E C L T
1
G D G V V K T A T S E C Y L G T
16
38.5% NZ_JAHBEV010000004.1 and 3 others:
NZ_JAHBEX010000010.1 Lanthipeptides: KII86_RS06785_lanthipeptide NZ_JAHBFD010000039.1 Lanthipeptides: KIJ16_RS07340_lanthipeptide NZ_LN890331.1 Lanthipeptides: LEKG_RS02295_lanthipeptide
Lanthipeptides: KII98_RS01100_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
+G V+ T++H E C N+ +W C C
3
S G V I N T V S H E C N M N S W Q F V F T C C
25
38.5% NZ_MSRU01000008.1: Lanthipeptides: BKH03_RS04355_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G+G V ++T H E C + + L C C
2
G D G V K W S I T H E C Y M N S L Q V L L T C C
25
37.5% NZ_CP046956.1: Lanthipeptides: ERJ70_RS03695_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
+G + T++H E C++ T W C C
1
D G A I S T V S H E C H M N T W Q F I F T C C
23
37.0% NZ_CP046629.1 and 3 others:
NZ_FNJX01000002.1 Lanthipeptides: BLR40_RS05025_lanthipeptide NZ_FNZS01000001.1 Lanthipeptides: BMX70_RS03125_lanthipeptide NZ_FOLK01000002.1 Lanthipeptides: BM262_RS05670_lanthipeptide
Lanthipeptides: GPA00_RS05740_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G+G V V T++H+C++ +W C C
3
G S G V V P T V S H D C H M N S W Q F L F T C C
26
37.0% NZ_CP114875.1: Lanthipeptides: O4Z47_RS14375_lanthipeptide
1
G N G V V L T L T H E C N-L A T W
17
+G + T L T E C+ L A T W
7
S S G D I C T L T S E C D H L A T W
24
36.0% NC_013928.1 and 4 others:
NZ_CP023477.1 Lanthipeptides: CO204_RS01880_lanthipeptide NZ_CP050270.1 Lanthipeptides: HB753_RS01085_lanthipeptide NZ_CP061071.1 Lanthipeptides: IBL27_RS01740_lanthipeptide NZ_JALDUN010000005.1 Lanthipeptides: M1F82_RS07570_lanthipeptide
Lanthipeptides: SMUNN2025_RS01705_lanthipeptide
1
G N G V V L T L T H E C N L A T W T K K L K C C
24
G N G V+ T+T C + + L C
2
G N G V I R T I T Q G C R M P N N M Q V L F T C
25
36.0% NZ_WBPF01000002.1: Lanthipeptides: F8162_RS00195_lanthipeptide
3
G V V L T L T H E C N L A T W T K K L K C C
24
G T++H E C+ T W C C
3
G Q F D T I S H E C H W N T W Q F L F T C C
24
34.6% NC_012470.1 and 2 others:
NZ_CABY01000005.1 Lanthipeptides: SZBHS5_RS06490_lanthipeptide NZ_CP078012.1 Lanthipeptides: KV238_RS09840_lanthipeptide
Lanthipeptides: SZO_RS04065_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
N G + T++H E C++ +W C C
3
N G A I K T I S H E C H M N S W Q F L F T C C
25
34.6% NZ_NWMU01000024.1 and 3 others:
NZ_NWMU01000024.1 Lanthipeptides: CO197_RS09145_lanthipeptide NZ_VMMF01000004.1 Lanthipeptides: HT717_RS01575_lanthipeptide NZ_VMMF01000004.1 Lanthipeptides: HT717_RS01570_lanthipeptide
Lanthipeptides: CO197_RS09150_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
N G V T++H E C++ ++ C C
3
N G V F K T I S H E C H M N S F Q F F F T C C
25
33.3% NZ_CP044492.1 and 1 other:
NZ_CP066294.2 Lanthipeptides: IGS65_RS08185_lanthipeptide
Lanthipeptides: FSA31_RS00605_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
G V V T+++E C + +W C C
5
Q G V V P T V S Y E C R M N S W Q H V F T C C
27
33.3% NZ_CP077726.1 and 12 others:
NZ_CP077726.1 Lanthipeptides: KTC92_RS18420_lanthipeptide NZ_CP077726.1 Lanthipeptides: KTC92_RS18415_lanthipeptide NZ_CP077726.1 Lanthipeptides: KTC92_RS18410_lanthipeptide NZ_CP077726.1 Lanthipeptides: KTC92_RS18405_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19070_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19065_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19060_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19055_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19050_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19045_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19040_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19035_lanthipeptide
Lanthipeptides: KTC92_RS18425_lanthipeptide
1
G N G V V L T L T H E C
12
G N G V+ T T H E C
1
G N G V I T T F T H E C
12
33.3% NZ_FNUH01000004.1 and 1 other:
NZ_FOGM01000011.1 Lanthipeptides: BMX20_RS07220_lanthipeptide
Lanthipeptides: BLU50_RS05815_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
G V V T+++E C + +W C C
5
Q G V V P T V S Y E C R M N S W Q S I F T C C
27
31.0% NZ_NTSF01000026.1 and 1 other:
NZ_NTSF01000026.1 Lanthipeptides: CN325_RS21835_lanthipeptide
Lanthipeptides: CN325_RS21835_lanthipeptide
2
N G V V L T L T H E C N L A T W
17
+G V T L T E C A W
14
D G S V C T L T K E C R P A C W
29
30.8% NC_017912.1 and 15 others:
NZ_BORO01000007.1 Lanthipeptides: KI343_RS07745_lanthipeptide NZ_CP007242.1 Lanthipeptides: KHU1_RS17410_lanthipeptide NZ_CP031424.1 Lanthipeptides: DXX91_RS18935_lanthipeptide NZ_CP032855.1 Lanthipeptides: D9C11_RS10440_lanthipeptide NZ_CP043809.1 Lanthipeptides: ETZ92_RS14260_lanthipeptide NZ_CP049904.1 Lanthipeptides: V753_RS18470_lanthipeptide NZ_CP053764.1 Lanthipeptides: HPQ66_RS18325_lanthipeptide NZ_CP061938.1 Lanthipeptides: IEN91_RS19800_lanthipeptide NZ_CP063768.1 Lanthipeptides: IM712_RS05205_lanthipeptide NZ_CP087137.1 Lanthipeptides: LOK79_RS18580_lanthipeptide NZ_CP092383.1 Lanthipeptides: MID02_RS19390_lanthipeptide NZ_JAEACM010000001.1 Lanthipeptides: I5F15_RS04355_lanthipeptide NZ_JAJNPN010000015.1 Lanthipeptides: LQ568_RS13285_lanthipeptide NZ_SDKF01000002.1 Lanthipeptides: EUA41_RS09950_lanthipeptide NZ_VDUT01000007.1 Lanthipeptides: FS412_RS14545_lanthipeptide
Lanthipeptides: MUS_RS20065_lanthipeptide
1
G N G V V L T L T H E C
12
G G V T L T E C
13
G G G G V C T L T S E C
24
30.0% NZ_CYXV01000003.1: Lanthipeptides: ARB75_RS04585_lanthipeptide
3
G V V L T L T H E C N L A T W T K
19
G+ T L T E C N+ T K
9
G I A C T L T G E C N I G T H I K
25
29.6% NZ_CP046304.1: Lanthipeptides: FOC54_RS00030_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
+G V+ T++H+C++ T+ C C
4
S G V I P T V S H D C H M N T F Q F M F T C C
26
29.6% NZ_CP049223.1 and 4 others:
NZ_CP049225.1 Lanthipeptides: G6Z85_RS06555_lanthipeptide NZ_CP049228.1 Lanthipeptides: G6Z83_RS06555_lanthipeptide NZ_JAKWZB010000003.1 Lanthipeptides: MMO78_RS01405_lanthipeptide NZ_PNGO01000002.1 Lanthipeptides: CJ224_RS02730_lanthipeptide
Lanthipeptides: G6Z86_RS06445_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
G V+ T++H E C + ++ C C
5
Q G V L P T V S H E C R M N S F Q H I F T C C
27
29.6% NZ_CP071875.1: Lanthipeptides: J4I02_RS02880_lanthipeptide
2
N G V V L T L T H E C N L A T W
17
G + T L T H E C W
8
G G A I C T L T H E C A G T H W
23
29.6% NZ_CP086142.1 and 3 others:
NZ_CP086142.1 Lanthipeptides: LL065_RS25460_lanthipeptide NZ_CP086142.1 Lanthipeptides: LL065_RS25455_lanthipeptide NZ_CP086142.1 Lanthipeptides: LL065_RS25450_lanthipeptide
Lanthipeptides: LL065_RS25465_lanthipeptide
1
G N G V V L T L T H E C
12
G G V+ T T H E C
1
G G G V I T T F T H E C
12
29.2% NZ_JALMDK010000017.1: Lanthipeptides: allorf_059288_059443_lanthipeptide
3
G V V L T L T H E C N
13
G + T L T E C N
4
G Y I C T L T W E C N
14
25.9% NZ_CP051645.1 and 2 others:
NZ_JAKVFF010000018.1 Lanthipeptides: MKR34_RS11425_lanthipeptide NZ_VDOJ01000018.1 Lanthipeptides: FSV48_RS11975_lanthipeptide
Lanthipeptides: HHJ99_RS13350_lanthipeptide
2
N G V V L T L T H E C N L A T W T K K L K C C
24
+G V+ T++H+C++ ++ C C
4
S G V I P T V S H D C H M N S F Q F V F T C C
26
25.8% NZ_CP095046.1: Lanthipeptides: MUN79_RS04140_lanthipeptide
1
G N G V V L T L T H E C N L A T
16
G G+ L T++ E C N T
7
G P G M F L T I S G E C N G G T
22
25.0% NZ_BMMB01000007.1 and 1 other:
NZ_BMMB01000007.1 Lanthipeptides: IEX62_RS15675_lanthipeptide
Lanthipeptides: IEX62_RS15680_lanthipeptide
1
G N G V V L T L T H E C
12
G+G + T L T +C
4
G D G W I T T L T D D C
15
25.0% NZ_CP012649.1: Lanthipeptides: allorf_0469167_0469307_lanthipeptide
1
G N G V V L T L T H
10
G+G V V L T++
1
G D G V V L T V S D
10
23.5% NZ_WITJ01000001.1 and 1 other:
NZ_WITJ01000001.1 Lanthipeptides: GHI93_RS00065_lanthipeptide
Lanthipeptides: GHI93_RS00065_lanthipeptide
2
N G V V L T L T H E C
12
N G V T T H E C
19
N G Y V C T W T H E C
29
23.3% NZ_CACZYW010000004.1 and 1 other:
NZ_CACZYW010000004.1 Lanthipeptides: HUF10_RS02825_lanthipeptide
Lanthipeptides: HUF10_RS02825_lanthipeptide
2
N G V V L T L T H E C
12
N G T L+H E C
15
N G N W C T L S H E C
25
23.3% NZ_CP027862.1 and 1 other:
NZ_CP027862.1 Lanthipeptides: allorf_0097945_0098112_lanthipeptide
Lanthipeptides: allorf_0097945_0098112_lanthipeptide
3
G V V L T L T H E C
12
G T L T H E C
16
G Y W C T L T H E C
25
23.3% NZ_CP040409.1 and 4 others:
NZ_CP040414.1 Lanthipeptides: FE331_RS04030_lanthipeptide NZ_CP040415.1 Lanthipeptides: FE330_RS03440_lanthipeptide NZ_CP040417.1 Lanthipeptides: FE328_RS00755_lanthipeptide NZ_CP040424.1 Lanthipeptides: FE321_RS03455_lanthipeptide
Lanthipeptides: FE336_RS03460_lanthipeptide
1
G N G V V L T L T H E C
12
G G+V T L T +C
2
G P G L V R T L T K D C
13
23.3% NZ_CP051884.1 and 2 others:
NZ_CP051884.1 Lanthipeptides: HGK68_RS15125_lanthipeptide NZ_CP051884.1 Lanthipeptides: HGK68_RS15125_lanthipeptide
Lanthipeptides: HGK68_RS15125_lanthipeptide
2
N G V V L T L T H E C
12
N G + T+T H E C
15
N G W L C T I T H E C
25
22.6% NZ_FNDV01000004.1: Lanthipeptides: BLR56_RS33870_lanthipeptide
3
G V V L T L T H E C N L A T W T K K L K C C
24
G N L A+W C C
5
G F S G I F D D P A N L A S W P T S T T C C
26
21.2% NC_017621.1 and 16 others:
NZ_CP039462.1 Lanthipeptides: E8M06_RS05390_lanthipeptide NZ_JABTZM010000032.1 Lanthipeptides: HRQ47_RS09675_lanthipeptide NZ_JAEVFQ010000010.1 Lanthipeptides: JNO64_RS06375_lanthipeptide NZ_JAFFHD010000003.1 Lanthipeptides: JN532_RS02075_lanthipeptide NZ_JAGFVG010000007.1 Lanthipeptides: J5581_RS04225_lanthipeptide NZ_JAIJZO010000001.1 Lanthipeptides: K5Q34_RS00965_lanthipeptide NZ_JAIMDS010000024.1 Lanthipeptides: K6V32_RS10650_lanthipeptide NZ_JAJUWV010000001.1 Lanthipeptides: LZF89_RS05505_lanthipeptide NZ_JAMDIS010000017.1 Lanthipeptides: M5P45_RS08180_lanthipeptide NZ_JAMYIU010000001.1 Lanthipeptides: NKE44_RS01780_lanthipeptide NZ_JAMYIX010000001.1 Lanthipeptides: NKE54_RS02675_lanthipeptide NZ_JAMYIY010000001.1 Lanthipeptides: NKE64_RS02785_lanthipeptide NZ_JAMYJP010000014.1 Lanthipeptides: NKE68_RS07350_lanthipeptide NZ_LR738722.1 Lanthipeptides: STREPSUIS_RS03955_lanthipeptide NZ_VZMP01000023.1 Lanthipeptides: F6P50_RS09295_lanthipeptide NZ_VZNS01000007.1 Lanthipeptides: F6P79_RS05700_lanthipeptide
Lanthipeptides: SSUD12_RS06540_lanthipeptide
1
G N G V V L T L T H E C
12
G+G V T L T +C
2
G S G F V K T L T K D C
13
21.2% NZ_AQQB01000068.1 and 6 others:
NZ_BCEY01000024.1 Lanthipeptides: GOZ53_RS05100_lanthipeptide NZ_BCEZ01000067.1 Lanthipeptides: GOZ55_RS11230_lanthipeptide NZ_BCFC01000053.1 Lanthipeptides: GOZ35_RS07920_lanthipeptide NZ_BCFG01000017.1 Lanthipeptides: GOZ50_RS03220_lanthipeptide NZ_BCFI01000009.1 Lanthipeptides: GOZ54_RS02495_lanthipeptide NZ_CP019557.1 Lanthipeptides: BZG42_RS05725_lanthipeptide
Lanthipeptides: K738_RS01000000110290_lanthipeptide
1
G N G V V L T L T H E C
12
G+G+V T L T +C
2
G S G L V K T L T K D C
13
19.4% NZ_CP034248.1: Lanthipeptides: EIM92_RS14995_lanthipeptide
3
G V V L T L T H E C N L
14
G V+ T++H E C+
8
G V I C T I S H E C H Y
19
19.4% NZ_CP102975.1 and 1 other:
NZ_FMOE01000002.1 Lanthipeptides: BJT27_RS07805_lanthipeptide
Lanthipeptides: NW953_RS00170_lanthipeptide
2
N G V V L T L T H E C
12
N G + T++H E C
15
N G K L C T V S H E C
25
allorf_0749729_0749866
Leader:
MSFAFLIEICDMARIGM
Core:
A S C S D I V N T F V Q N F S C I R I P T L S D M L L T
Core with dehydrations:
A Dha Cys Dha D I V N Dhb F V Q N F Dha Cys I R I P Dhb L Dha D M L L Dhb

#### MIBiG 3.1 matches for allorf_0749729_0749866

21.4% BGC0000503 (cinA): Lanthipeptide: cinnamycin
2
S C S D I V N T F V
11
S C S T F V
4
S C S F G P F T F V
13
21.4% BGC0000563 (AEA03263.1): Lanthipeptide: venezuelin
1
A S C S D I V N T F V Q N F S C I R I
19
A+C + + N C I I
1
A T C E C V G L L T L L N T V C I G I
19
14.3% BGC0000563 (AEA03263.1): Lanthipeptide: venezuelin
6
I V N T F V Q N F S C
16
++N T S C
11
L L N T V C I G I S C
21

#### antiSMASH-DB 4.0 matches for allorf_0749729_0749866

28.6% NZ_CP085297.1: Lanthipeptides: allorf_03653_03829_lanthipeptide
13
N F S C I R I P T L S D M L L
27
+F C I+I L M L L
3
S F K C I K I S P L W L M L L
17
21.4% NZ_CP040938.1: Lanthipeptides: allorf_0462507_0462617_lanthipeptide
8
N T F V Q N F S C I R
18
N +Q N S C+R
7
N K H L Q N N S C L R
17
14.3% NZ_CP096019.1: Lanthipeptides: allorf_1451265_1451483_lanthipeptide
8
N T F V Q N F S C I R I P
20
+++ + S C+R P
9
S S Y A E E V S C L R T P
21
allorf_0765101_0765208
Leader:
MHDCDSLGEIELA
Core:
K K P F R K A I P C T F A K T Q I K Q L Y Y
Core with dehydrations:
K K P F R K A I P Cys Dhb F A K Dhb Q I K Q L Y Y

#### antiSMASH-DB 4.0 matches for allorf_0765101_0765208

100.0% NC_015760.1: Lanthipeptides: allorf_0765101_0765208_lanthipeptide
1
K K P F R K A I P C T F A K T Q I K Q L Y Y
22
K K P F R K A I P C T F A K T Q I K Q L Y Y
1
K K P F R K A I P C T F A K T Q I K Q L Y Y
22
22.7% NZ_CP019883.1 and 5 others:
NZ_CP019883.1 Lanthipeptides: B1T43_RS28900_lanthipeptide NZ_MWKV01000001.1 Lanthipeptides: B1T49_RS23205_lanthipeptide NZ_MWKV01000001.1 Lanthipeptides: B1T49_RS23205_lanthipeptide NZ_NKQW01000001.1 Lanthipeptides: CDK94_RS31220_lanthipeptide NZ_NKQW01000001.1 Lanthipeptides: CDK94_RS31220_lanthipeptide
Lanthipeptides: B1T43_RS28900_lanthipeptide
9
P C T F A K T Q
16
P C T F+K++
12
P C T F S K S R
19
20.0% NZ_CP086141.1: Lanthipeptides: LL065_RS24720_lanthipeptide
7
A I P C T F A K T Q I
17
++P C T F T I
14
S V P C T F P I T T I
24
with 1 more sequence matches
14.3% NZ_CP029607.1: Lanthipeptides: allorf_6468650_6468883_lanthipeptide
3
P F R K A I P C T F A K T Q I K Q L Y Y
22
P R+A P C K T+ L Y
33
P A R R A P P C-V T K T R P S H L S Y
51
allorf_0765117_0765245
Leader:
MICVLANVHGM
Core:
A F L N G F L A N S I S P R L S Q S C K K Q R H K T V A F W S
Core with dehydrations:
A F L N G F L A N Dha I Dha P R L Dha Q Dha Cys K K Q R H K Dhb V A F W Dha

#### antiSMASH-DB 4.0 matches for allorf_0765117_0765245

100.0% NC_015760.1: Lanthipeptides: allorf_0765117_0765245_lanthipeptide
1
A F L N G F L A N S I S P R L S Q S C K K Q R H K T V A F W S
31
A F L N G F L A N S I S P R L S Q S C K K Q R H K T V A F W S
1
A F L N G F L A N S I S P R L S Q S C K K Q R H K T V A F W S
31
allorf_0765314_0765427
Leader:
MLVNFAFS
Core:
C D N P H F C F S L L Y D M M K A N E N Y S H I C V M E V
Core with dehydrations:
Cys D N P H F Cys F Dha L L Y D M M K A N E N Y Dha H I Cys V M E V

#### MIBiG 3.1 matches for allorf_0765314_0765427

9.8% BGC0002120 (NQE92413.1): Lanthipeptide: nocathioamide A
14
M M K A N E N Y S H
23
M M K N E +
3
M M K R N E E V A E
12

#### antiSMASH-DB 4.0 matches for allorf_0765314_0765427

100.0% NC_015760.1: Lanthipeptides: allorf_0765314_0765427_lanthipeptide
1
C D N P H F C F S L L Y D M M K A N E N Y S H I C V M E V
29
C D N P H F C F S L L Y D M M K A N E N Y S H I C V M E V
1
C D N P H F C F S L L Y D M M K A N E N Y S H I C V M E V
29

#### Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine
Lanthipeptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists the number of lanthionine bridges, possible molecular weights, and the scores for cleavage site prediction and RODEO.

ctg1_597 - Class II
  Cleavage pHMM score: 5.20
  RODEO score: 0
  Monoisotopic mass: 2559.3 Da
  Molecular weight: 2561.0 Da
  Number of bridges: 3
  Alternative weights
    (assuming N unmodified Ser/Thr residues)
    2579.1 Da N = 1
allorf_0749729_0749866 - Class II
  Cleavage pHMM score: -7.30
  RODEO score: 0
  Monoisotopic mass: 2961.5 Da
  Molecular weight: 2963.4 Da
  Number of bridges: 2
  Alternative weights
    (assuming N unmodified Ser/Thr residues)
    2981.4 Da N = 1
    2999.5 Da N = 2
    3017.5 Da N = 3
    3035.5 Da N = 4
    3053.5 Da N = 5
allorf_0765101_0765208 - Class II
  Cleavage pHMM score: -6.40
  RODEO score: 0
  Monoisotopic mass: 2635.5 Da
  Molecular weight: 2637.2 Da
  Number of bridges: 1
  Alternative weights
    (assuming N unmodified Ser/Thr residues)
    2655.2 Da N = 1
allorf_0765117_0765245 - Class II
  Cleavage pHMM score: -0.70
  RODEO score: 0
  Monoisotopic mass: 3412.9 Da
  Molecular weight: 3414.9 Da
  Number of bridges: 1
  Alternative weights
    (assuming N unmodified Ser/Thr residues)
    3432.9 Da N = 1
    3451.0 Da N = 2
    3469.0 Da N = 3
    3487.0 Da N = 4
    3505.0 Da N = 5
allorf_0765314_0765427 - Class II
  Cleavage pHMM score: -6.90
  RODEO score: 0
  Monoisotopic mass: 3416.4 Da
  Molecular weight: 3418.9 Da
  Number of bridges: 2

gnlProkkaICOPOGPD_1 - Region 3 - T3PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,579,285 - 1,620,451 nt. (total: 41,167 nt) Show pHMM detection rules used
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
NRPS/PKS domains
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A domain glossary is available here, and an explanation of the visualisation is available here.
Selected features only
Show module domains
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaICOPOGPD_1 - Region 4 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,782,054 - 1,792,350 nt. (total: 10,297 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaICOPOGPD_1 - Region 5 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,875,773 - 1,894,610 nt. (total: 18,838 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.