GCA_000347515.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOBBHMPBI_12 (original name was: gnl|Prokka|OBBHMPBI_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	terpene	24,685	43,517

gnlProkkaOBBHMPBI_21 (original name was: gnl|Prokka|OBBHMPBI_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	T3PKS	1	26,804

gnlProkkaOBBHMPBI_42 (original name was: gnl|Prokka|OBBHMPBI_42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	cyclic-lactone-autoinducer	23,778	44,483

gnlProkkaOBBHMPBI_56 (original name was: gnl|Prokka|OBBHMPBI_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	RiPP-like	31,291	43,441

Region	Type	From	To	Similarity
Region 12.1	terpene	24,685	43,517
Region 20.1	T3PKS	1	26,804
Region 39.1	cyclic-lactone-autoinducer	23,778	44,483
Region 46.1	RiPP-like	31,291	43,441

No secondary metabolite regions were found in these records:: gnlProkkaOBBHMPBI_1 (original name was: gnl|Prokka|OBBHMPBI_1); gnlProkkaOBBHMPBI_2 (original name was: gnl|Prokka|OBBHMPBI_2); gnlProkkaOBBHMPBI_3 (original name was: gnl|Prokka|OBBHMPBI_3); gnlProkkaOBBHMPBI_4 (original name was: gnl|Prokka|OBBHMPBI_4); gnlProkkaOBBHMPBI_5 (original name was: gnl|Prokka|OBBHMPBI_5); gnlProkkaOBBHMPBI_6 (original name was: gnl|Prokka|OBBHMPBI_6); gnlProkkaOBBHMPBI_7 (original name was: gnl|Prokka|OBBHMPBI_7); gnlProkkaOBBHMPBI_8 (original name was: gnl|Prokka|OBBHMPBI_8); gnlProkkaOBBHMPBI_9 (original name was: gnl|Prokka|OBBHMPBI_9); gnlProkkaOBBHMPBI_10 (original name was: gnl|Prokka|OBBHMPBI_10); gnlProkkaOBBHMPBI_11 (original name was: gnl|Prokka|OBBHMPBI_11); gnlProkkaOBBHMPBI_13 (original name was: gnl|Prokka|OBBHMPBI_13); gnlProkkaOBBHMPBI_14 (original name was: gnl|Prokka|OBBHMPBI_14); gnlProkkaOBBHMPBI_16 (original name was: gnl|Prokka|OBBHMPBI_16); gnlProkkaOBBHMPBI_17 (original name was: gnl|Prokka|OBBHMPBI_17); gnlProkkaOBBHMPBI_18 (original name was: gnl|Prokka|OBBHMPBI_18); gnlProkkaOBBHMPBI_19 (original name was: gnl|Prokka|OBBHMPBI_19); gnlProkkaOBBHMPBI_20 (original name was: gnl|Prokka|OBBHMPBI_20); gnlProkkaOBBHMPBI_22 (original name was: gnl|Prokka|OBBHMPBI_22); gnlProkkaOBBHMPBI_23 (original name was: gnl|Prokka|OBBHMPBI_23); gnlProkkaOBBHMPBI_24 (original name was: gnl|Prokka|OBBHMPBI_24); gnlProkkaOBBHMPBI_25 (original name was: gnl|Prokka|OBBHMPBI_25); gnlProkkaOBBHMPBI_26 (original name was: gnl|Prokka|OBBHMPBI_26); gnlProkkaOBBHMPBI_27 (original name was: gnl|Prokka|OBBHMPBI_27); gnlProkkaOBBHMPBI_28 (original name was: gnl|Prokka|OBBHMPBI_28); gnlProkkaOBBHMPBI_30 (original name was: gnl|Prokka|OBBHMPBI_30); gnlProkkaOBBHMPBI_31 (original name was: gnl|Prokka|OBBHMPBI_31); gnlProkkaOBBHMPBI_32 (original name was: gnl|Prokka|OBBHMPBI_32); gnlProkkaOBBHMPBI_33 (original name was: gnl|Prokka|OBBHMPBI_33); gnlProkkaOBBHMPBI_34 (original name was: gnl|Prokka|OBBHMPBI_34); gnlProkkaOBBHMPBI_35 (original name was: gnl|Prokka|OBBHMPBI_35); gnlProkkaOBBHMPBI_37 (original name was: gnl|Prokka|OBBHMPBI_37); gnlProkkaOBBHMPBI_38 (original name was: gnl|Prokka|OBBHMPBI_38); gnlProkkaOBBHMPBI_39 (original name was: gnl|Prokka|OBBHMPBI_39); gnlProkkaOBBHMPBI_40 (original name was: gnl|Prokka|OBBHMPBI_40); gnlProkkaOBBHMPBI_41 (original name was: gnl|Prokka|OBBHMPBI_41); gnlProkkaOBBHMPBI_43 (original name was: gnl|Prokka|OBBHMPBI_43); gnlProkkaOBBHMPBI_44 (original name was: gnl|Prokka|OBBHMPBI_44); gnlProkkaOBBHMPBI_45 (original name was: gnl|Prokka|OBBHMPBI_45); gnlProkkaOBBHMPBI_46 (original name was: gnl|Prokka|OBBHMPBI_46); gnlProkkaOBBHMPBI_47 (original name was: gnl|Prokka|OBBHMPBI_47); gnlProkkaOBBHMPBI_55 (original name was: gnl|Prokka|OBBHMPBI_55); gnlProkkaOBBHMPBI_57 (original name was: gnl|Prokka|OBBHMPBI_57); gnlProkkaOBBHMPBI_59 (original name was: gnl|Prokka|OBBHMPBI_59); gnlProkkaOBBHMPBI_63 (original name was: gnl|Prokka|OBBHMPBI_63); gnlProkkaOBBHMPBI_66 (original name was: gnl|Prokka|OBBHMPBI_66); gnlProkkaOBBHMPBI_68 (original name was: gnl|Prokka|OBBHMPBI_68)

Compact view

gnlProkkaOBBHMPBI_12 - Region 1 - terpene

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Location: 24,685 - 43,517 nt. (total: 18,833 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOBBHMPBI_21 - Region 1 - T3PKS

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Location: 1 - 26,804 nt. (total: 26,804 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOBBHMPBI_42 - Region 1 - cyclic-lactone-autoinducer

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Location: 23,778 - 44,483 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOBBHMPBI_56 - Region 1 - RiPP-like

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Location: 31,291 - 43,441 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.