Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_000410275.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-4270	CNCM I-4270	SAMN02469729	2000	-	-	0	0	0	2	2.00
2	GCA_044905105.1	Lacticaseibacillus paracasei	E	SAMN44286705	-	-	-	286	0	0	1	1.00
3	GCA_002148875.1	Lacticaseibacillus paracasei	DPC2071	SAMN05949321	1988-11-08	Ireland	-	287	0	0	2	2.00
4	GCA_041734185.1	Lacticaseibacillus paracasei	MGL98	SAMN43028860	2024-07-12	South Korea	-	340	0	0	1	1.00
5	GCA_041893825.1	Lacticaseibacillus paracasei	FMT2	SAMN43472422	2024	South Korea: Daegu	-	340	0	0	1	1.00
6	GCA_014905075.1	Lacticaseibacillus paracasei	NFFJ04	SAMN14444968	2018-11	South Korea: Sangju	-	366	0	0	1	1.00
7	GCA_030540905.1	Lacticaseibacillus paracasei	11w	SAMN36403201	2022-01-26	Lithuania: Vilnius	-	369	0	0	2	2.00
8	GCA_031630235.1	Lacticaseibacillus paracasei	69Bis	SAMN30173654	2012-03-01	Algeria: Sidi Okba region, Biskra.	goat	371	0	0	2	2.00
9	GCA_018917305.1	Lacticaseibacillus paracasei	N53	SAMN19374054	2019-08	China: Suzhou	Macaca fascicularis	417	0	0	2	2.00
10	GCA_003367655.1	Lacticaseibacillus paracasei subsp. paracasei	KMB_598	SAMN09398938	2013	Slovakia	-	419	0	0	2	2.00
11	GCA_039615415.1	Lacticaseibacillus paracasei	TBM 27	SAMN41068605	2015-10	Viet Nam: Bac Giang	-	428	0	0	2	2.00
12	GCA_000409835.1	Lacticaseibacillus paracasei subsp. tolerans Lpl7	Lpl7	SAMN02469714	-	-	-	447	0	0	2	2.00
13	GCA_000410335.1	Lacticaseibacillus paracasei subsp. tolerans Lpl14	Lpl14	SAMN02469703	1996	-	-	449	0	0	2	2.00
14	GCA_001540885.1	Lacticaseibacillus paracasei	Lc1542	SAMN03702539	2012	France	bovine	558	0	0	2	2.00
15	GCA_000410095.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-2877	CNCM I-2877	SAMN02641492	2000	-	-	584	0	0	2	2.00
16	GCA_000409975.1	Lacticaseibacillus paracasei subsp. paracasei Lpp123	Lpp123	SAMN02469719	2003	-	-	593	0	0	2	2.00
17	GCA_003712535.1	Lacticaseibacillus paracasei	FAM18175	SAMN04088877	2003	Switzerland	-	609	0	0	2	2.00
18	GCA_003712645.1	Lacticaseibacillus paracasei	FAM22276	SAMN04088881	1990	Switzerland	-	610	0	0	2	2.00
19	GCA_003712935.1	Lacticaseibacillus paracasei	FAM3248	SAMN04088887	1990	Switzerland	-	610	0	0	2	2.00
20	GCA_003712835.1	Lacticaseibacillus paracasei	FAM8407	SAMN04088897	-	Switzerland	-	615	0	0	2	2.00
21	GCA_003712325.1	Lacticaseibacillus paracasei	FAM18123	SAMN04088867	2003	Switzerland	-	618	0	0	2	2.00
22	GCA_025190525.1	Lacticaseibacillus paracasei	CIRM-BIA 1517	SAMN10365450	2012	France	-	618	0	0	2	2.00
23	GCA_001514415.1	Lacticaseibacillus paracasei	KL1	SAMN04378089	2006-03	China:Jilin	-	619	0	0	1	1.00
24	GCA_003177075.1	Lacticaseibacillus paracasei	EG9	SAMN09239981	2012	Japan: Ibaraki	-	619	0	0	1	1.00
25	GCA_035021805.1	Lacticaseibacillus paracasei	SRX10	SAMN38318108	2019	Greece: Attiki	-	619	0	0	2	2.00
26	GCA_039566755.1	Lacticaseibacillus paracasei	Z34	SAMN41162779	2022-10-11	Slovakia	-	619	0	0	2	2.00
27	GCA_003346025.1	Lacticaseibacillus paracasei	KMB_622	SAMN09398954	2008	Slovakia	-	620	0	0	2	2.00
28	GCA_023375875.1	Lacticaseibacillus paracasei	SP5	SAMN25227086	2018	Greece: Orestiada	-	621	0	0	2	2.00
29	GCA_039631055.1	Lacticaseibacillus paracasei	B19	SAMN41249973	2023-04-25	Slovakia	-	621	0	0	2	2.00
30	GCA_039631065.1	Lacticaseibacillus paracasei	B18	SAMN41249972	2023-04-25	Slovakia	-	621	0	0	2	2.00
31	GCA_039631115.1	Lacticaseibacillus paracasei	L17	SAMN41249976	2023-05-30	Slovakia	-	621	0	0	2	2.00
32	GCA_039631165.1	Lacticaseibacillus paracasei	B25	SAMN41249975	2023-04-25	Slovakia	-	621	0	0	2	2.00
33	GCA_039631215.1	Lacticaseibacillus paracasei	B20	SAMN41249974	2023-04-25	Slovakia	-	621	0	0	2	2.00
34	GCA_039631235.1	Lacticaseibacillus paracasei	L18	SAMN41249977	2023-05-30	Slovakia	-	621	0	0	2	2.00
35	GCA_002027405.1	Lacticaseibacillus paracasei	W16	SAMN06479973	2012-03	China: Nanchang	-	625	0	0	2	2.00
36	GCA_003712585.1	Lacticaseibacillus paracasei	FAM18172	SAMN04088876	2003	Switzerland	-	625	0	0	2	2.00
37	GCA_047946965.1	Lacticaseibacillus paracasei	XM-38	SAMN30660290	2017-06-01	China:Inner Mongolia	-	625	0	0	1	1.00
38	GCA_000409855.1	Lacticaseibacillus paracasei subsp. paracasei Lpp122	Lpp122	SAMN02469705	2003	-	-	626	0	0	2	2.00
39	GCA_003346265.1	Lacticaseibacillus paracasei	KMB_616	SAMN09398948	2008	Slovakia	-	627	0	0	2	2.00
40	GCA_003545945.1	Lacticaseibacillus paracasei	TJB4	SAMN09604022	2014-09-01	Tajikistan	-	627	0	0	2	2.00
41	GCA_028878255.1	Lacticaseibacillus paracasei	I2	SAMN23708201	2012-01-30	Italy	-	627	0	0	2	2.00
42	GCA_032466015.1	Lacticaseibacillus paracasei	LMG 19719	SAMN37405140	1999	Denmark	-	627	0	0	1	1.00
43	GCA_000309705.1	Lacticaseibacillus paracasei	UCD174	SAMN02472002	-	USA: California	-	629	0	0	2	2.00
44	GCA_001436385.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	DSM 5622	SAMN02369433	1989	-	-	630	0	0	2	2.00
45	GCA_002120125.1	Lacticaseibacillus paracasei	HZ-1	SAMN05954276	2012-06	China: Tianjin	-	630	0	0	2	2.00
46	GCA_007989125.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00166241	-	-	-	630	0	0	2	2.00
47	GCA_030361125.1	Lacticaseibacillus paracasei	TOM.15.25	SAMN35776887	2021-11	Russia: Primorsky Krai	-	630	0	0	2	2.00
48	GCA_000829035.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00010723	-	-	-	631	0	0	1	1.00
49	GCA_003712705.1	Lacticaseibacillus paracasei	FAM22279	SAMN04088884	-	Switzerland	-	631	0	0	2	2.00
50	GCA_004354655.1	Lacticaseibacillus paracasei subsp. paracasei	ATCC 25302	SAMN08555498	2017	Denmark	-	631	0	0	2	2.00
51	GCA_013867595.1	Lacticaseibacillus paracasei	s-16	SAMN15579850	2020-07-20	-	-	631	0	0	2	2.00
52	GCA_016887835.1	Lacticaseibacillus paracasei	2333	SAMN17562094	2011-09-29	Italy	-	631	0	0	2	2.00
53	GCA_000014525.1	Lacticaseibacillus paracasei ATCC 334	ATCC 334	SAMN02598528	-	-	-	632	0	0	1	1.00
54	GCA_000159495.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	ATCC 25302	SAMN00001470	-	-	Homo sapiens	632	0	0	2	2.00
55	GCA_000409935.1	Lacticaseibacillus paracasei subsp. paracasei Lpp120	Lpp120	SAMN02469723	2003	-	-	633	0	0	2	2.00
56	GCA_003712425.1	Lacticaseibacillus paracasei	FAM18124	SAMN04088868	2003	Switzerland	-	633	0	0	2	2.00
57	GCA_003712445.1	Lacticaseibacillus paracasei	FAM18129	SAMN04088870	2003	Switzerland	-	633	0	0	2	2.00
58	GCA_039566645.1	Lacticaseibacillus paracasei	A191	SAMN41162755	2007	Slovakia	-	640	0	0	2	2.00
59	GCA_003712265.1	Lacticaseibacillus paracasei	FAM18110	SAMN04088863	2003	Switzerland	-	644	0	0	2	2.00
60	GCA_036762785.1	Lacticaseibacillus paracasei	1571-2_IL3211	SAMN37904772	-	-	animal	645	0	0	2	2.00
61	GCA_015693945.1	Lacticaseibacillus paracasei subsp. tolerans	ZY-1	SAMN16861159	2017-06	China	-	646	0	0	1	1.00
62	GCA_022614605.1	Lacticaseibacillus paracasei	GMNL-653	SAMN22548460	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	646	0	0	1	1.00
63	GCA_036762765.1	Lacticaseibacillus paracasei	1567_IL3212	SAMN37904769	-	-	animal	646	0	0	2	2.00
64	GCA_039615445.1	Lacticaseibacillus paracasei	NKM 5.4	SAMN41068727	2016-02	Viet Nam: Khanh Hoa	-	646	0	0	2	2.00
65	GCA_044740695.1	Lacticaseibacillus paracasei	E11.5	SAMN44487087	-	Ethiopia	-	646	0	0	1	1.00
66	GCA_000410135.1	Lacticaseibacillus paracasei subsp. paracasei Lpp17	Lpp17	SAMN02469707	1987	-	-	647	0	0	2	2.00
67	GCA_002257625.1	Lacticaseibacillus paracasei	TK1501	SAMN05921089	2015	China:Inner Mongolia	-	647	0	0	1	1.00
68	GCA_000410175.1	Lacticaseibacillus paracasei subsp. paracasei Lpp225	Lpp225	SAMN02469715	2009	-	-	648	0	0	2	2.00
69	GCA_003199005.1	Lacticaseibacillus paracasei	Lpc10	SAMN09283999	2014	Argentina: Provincia de Rio Negro	-	648	0	0	1	1.00
70	GCA_002027415.1	Lacticaseibacillus paracasei	W14	SAMN06480069	2012-03	China: Nanchang	-	649	0	0	2	2.00
71	GCA_002079285.1	Lacticaseibacillus paracasei	IIA	SAMN04571918	2014-05-05	Indonesia: Bogor	-	649	0	0	1	1.00
72	GCA_003712625.1	Lacticaseibacillus paracasei	FAM19404	SAMN04088880	1990	Switzerland	-	649	0	0	2	2.00
73	GCA_025137495.1	Lacticaseibacillus paracasei	L1	SAMN20355457	2015-10-10	China:Jinzhou	-	649	0	0	1	1.00
74	GCA_033815995.1	Lacticaseibacillus paracasei	YE01	SAMN37887709	-	China	-	649	0	0	1	1.00
75	GCA_047785155.1	Lacticaseibacillus paracasei	SRCM212209	SAMN46082883	2020-10	South Korea:Sunchang	-	649	0	0	1	1.00
76	GCA_000410375.1	Lacticaseibacillus paracasei subsp. paracasei Lpp71	Lpp71	SAMN02469712	1999	-	-	650	0	0	1	1.00
77	GCA_004167215.1	Lacticaseibacillus paracasei	co_0103	SAMN10239551	2015-01	USA: Cambridge	Homo sapiens	650	1	2	2	3.00
78	GCA_009679435.1	Lacticaseibacillus paracasei	BIOML-A3	SAMN11946116	2015-12-09	USA:Boston	Homo sapiens	650	0	0	2	2.00
79	GCA_009679495.1	Lacticaseibacillus paracasei	BIOML-A2	SAMN11946115	2015-12-09	USA:Boston	Homo sapiens	650	1	2	2	3.00
80	GCA_009679505.1	Lacticaseibacillus paracasei	BIOML-A1	SAMN11946114	2015-12-09	USA:Boston	Homo sapiens	650	0	0	2	2.00
81	GCA_018257175.1	Lacticaseibacillus paracasei	Dm-2019-60	SAMN17146146	2019	USA: Ithaca, NY	Drosophila melanogaster	650	0	0	2	2.00
82	GCA_018729425.1	Lacticaseibacillus paracasei	MYD3	SAMN16551136	2017	Indonesia: Yogyakarta	-	650	0	0	2	2.00
83	GCA_019641395.1	Lacticaseibacillus paracasei	LB113R	SAMN20672827	2018	Denmark	-	650	0	0	2	2.00
84	GCA_026967095.1	Lacticaseibacillus paracasei	Lpc_yogurt_C5	SAMN32062184	2021-07-27	USA:Chicago	-	650	0	0	2	2.00
85	GCA_026967175.1	Lacticaseibacillus paracasei	Lpc_yogurt_C3	SAMN32062182	2021-07-27	USA:Chicago	-	650	0	0	3	3.00
86	GCA_026967235.1	Lacticaseibacillus paracasei	Lpc_yogurt_C1	SAMN32062180	2021-07-27	USA:Chicago	-	650	0	0	2	2.00
87	GCA_028322925.1	Lacticaseibacillus paracasei	1001217st1_H10_1001216I_160404	SAMN31322636	2016-04-04	USA	Homo sapiens	650	0	0	2	2.00
88	GCA_034555135.1	Lacticaseibacillus paracasei	BF3	SAMN38857134	2021	Spain:Galicia	Brachionus plicatilis	650	0	0	2	2.00
89	GCA_000026485.1	Lacticaseibacillus paracasei	BL23	SAMEA2272724	-	-	-	651	0	0	1	1.00
90	GCA_009679455.1	Lacticaseibacillus paracasei	BIOML-A4	SAMN11946117	2015-12-09	USA:Boston	Homo sapiens	651	0	0	2	2.00
91	GCA_023656965.1	Lacticaseibacillus paracasei	ATCC 27092	SAMN11309554	1970	Japan: Kanzaki	Homo sapiens	651	0	0	2	2.00
92	GCA_030061895.1	Lacticaseibacillus paracasei	GM-080	SAMN27485237	2019-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	651	0	0	1	1.00
93	GCA_965138865.1	Lacticaseibacillus paracasei	CIP109805	SAMEA117660480	-	-	-	651	0	0	2	2.00
94	GCA_000019245.3	Lacticaseibacillus paracasei	Zhang	SAMN02603933	-	China: Inner Mongolia	-	652	0	0	1	1.00
95	GCA_000410115.1	Lacticaseibacillus paracasei subsp. paracasei Lpp48	Lpp48	SAMN02641496	1996	-	-	652	0	0	1	1.00
96	GCA_002115655.1	Lacticaseibacillus paracasei	DmW_181	SAMN06767179	2013-07	USA: New York	Drosophila	652	0	0	2	2.00
97	GCA_003627255.1	Lacticaseibacillus paracasei	ZFM54	SAMN07305422	2011-08-03	China:Zhejiang maternal and child health hospital	Homo sapiens	652	0	0	1	1.00
98	GCA_003712385.1	Lacticaseibacillus paracasei	FAM18119	SAMN04088865	2003	Switzerland	-	652	0	0	2	2.00
99	GCA_010363715.1	Lacticaseibacillus paracasei	D10-4	SAMN13943411	2018-01-10	USA	Homo sapiens	652	0	0	2	2.00
100	GCA_019175405.1	Lacticaseibacillus paracasei subsp. paracasei	GR0548	SAMN18436391	2008-12	Taiwan	-	652	0	0	1	1.00