GCA_000474695.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNOHNPPOK_2 (original name was: gnl|Prokka|NOHNPPOK_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T3PKS	51,970	93,139

gnlProkkaNOHNPPOK_9 (original name was: gnl|Prokka|NOHNPPOK_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	cyclic-lactone-autoinducer	8,170	28,875

gnlProkkaNOHNPPOK_12 (original name was: gnl|Prokka|NOHNPPOK_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	terpene	49,165	70,046

gnlProkkaNOHNPPOK_13 (original name was: gnl|Prokka|NOHNPPOK_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	RiPP-like	42,200	54,350

Region	Type	From	To	Similarity
Region 2.1	T3PKS	51,970	93,139
Region 9.1	cyclic-lactone-autoinducer	8,170	28,875
Region 12.1	terpene	49,165	70,046
Region 13.1	RiPP-like	42,200	54,350

No secondary metabolite regions were found in these records:: gnlProkkaNOHNPPOK_1 (original name was: gnl|Prokka|NOHNPPOK_1); gnlProkkaNOHNPPOK_3 (original name was: gnl|Prokka|NOHNPPOK_3); gnlProkkaNOHNPPOK_4 (original name was: gnl|Prokka|NOHNPPOK_4); gnlProkkaNOHNPPOK_5 (original name was: gnl|Prokka|NOHNPPOK_5); gnlProkkaNOHNPPOK_6 (original name was: gnl|Prokka|NOHNPPOK_6); gnlProkkaNOHNPPOK_7 (original name was: gnl|Prokka|NOHNPPOK_7); gnlProkkaNOHNPPOK_8 (original name was: gnl|Prokka|NOHNPPOK_8); gnlProkkaNOHNPPOK_10 (original name was: gnl|Prokka|NOHNPPOK_10); gnlProkkaNOHNPPOK_11 (original name was: gnl|Prokka|NOHNPPOK_11); gnlProkkaNOHNPPOK_14 (original name was: gnl|Prokka|NOHNPPOK_14); gnlProkkaNOHNPPOK_15 (original name was: gnl|Prokka|NOHNPPOK_15); gnlProkkaNOHNPPOK_16 (original name was: gnl|Prokka|NOHNPPOK_16); gnlProkkaNOHNPPOK_17 (original name was: gnl|Prokka|NOHNPPOK_17); gnlProkkaNOHNPPOK_18 (original name was: gnl|Prokka|NOHNPPOK_18); gnlProkkaNOHNPPOK_19 (original name was: gnl|Prokka|NOHNPPOK_19); gnlProkkaNOHNPPOK_20 (original name was: gnl|Prokka|NOHNPPOK_20); gnlProkkaNOHNPPOK_21 (original name was: gnl|Prokka|NOHNPPOK_21); gnlProkkaNOHNPPOK_22 (original name was: gnl|Prokka|NOHNPPOK_22); gnlProkkaNOHNPPOK_23 (original name was: gnl|Prokka|NOHNPPOK_23); gnlProkkaNOHNPPOK_24 (original name was: gnl|Prokka|NOHNPPOK_24); gnlProkkaNOHNPPOK_25 (original name was: gnl|Prokka|NOHNPPOK_25); gnlProkkaNOHNPPOK_26 (original name was: gnl|Prokka|NOHNPPOK_26); gnlProkkaNOHNPPOK_27 (original name was: gnl|Prokka|NOHNPPOK_27); gnlProkkaNOHNPPOK_28 (original name was: gnl|Prokka|NOHNPPOK_28); gnlProkkaNOHNPPOK_29 (original name was: gnl|Prokka|NOHNPPOK_29); gnlProkkaNOHNPPOK_30 (original name was: gnl|Prokka|NOHNPPOK_30); gnlProkkaNOHNPPOK_31 (original name was: gnl|Prokka|NOHNPPOK_31); gnlProkkaNOHNPPOK_32 (original name was: gnl|Prokka|NOHNPPOK_32); gnlProkkaNOHNPPOK_33 (original name was: gnl|Prokka|NOHNPPOK_33); gnlProkkaNOHNPPOK_34 (original name was: gnl|Prokka|NOHNPPOK_34); gnlProkkaNOHNPPOK_35 (original name was: gnl|Prokka|NOHNPPOK_35); gnlProkkaNOHNPPOK_36 (original name was: gnl|Prokka|NOHNPPOK_36); gnlProkkaNOHNPPOK_37 (original name was: gnl|Prokka|NOHNPPOK_37); gnlProkkaNOHNPPOK_38 (original name was: gnl|Prokka|NOHNPPOK_38); gnlProkkaNOHNPPOK_39 (original name was: gnl|Prokka|NOHNPPOK_39); gnlProkkaNOHNPPOK_40 (original name was: gnl|Prokka|NOHNPPOK_40); gnlProkkaNOHNPPOK_41 (original name was: gnl|Prokka|NOHNPPOK_41); gnlProkkaNOHNPPOK_42 (original name was: gnl|Prokka|NOHNPPOK_42); gnlProkkaNOHNPPOK_43 (original name was: gnl|Prokka|NOHNPPOK_43); gnlProkkaNOHNPPOK_44 (original name was: gnl|Prokka|NOHNPPOK_44); gnlProkkaNOHNPPOK_45 (original name was: gnl|Prokka|NOHNPPOK_45); gnlProkkaNOHNPPOK_46 (original name was: gnl|Prokka|NOHNPPOK_46); gnlProkkaNOHNPPOK_47 (original name was: gnl|Prokka|NOHNPPOK_47); gnlProkkaNOHNPPOK_48 (original name was: gnl|Prokka|NOHNPPOK_48); gnlProkkaNOHNPPOK_49 (original name was: gnl|Prokka|NOHNPPOK_49); gnlProkkaNOHNPPOK_50 (original name was: gnl|Prokka|NOHNPPOK_50); gnlProkkaNOHNPPOK_51 (original name was: gnl|Prokka|NOHNPPOK_51); gnlProkkaNOHNPPOK_52 (original name was: gnl|Prokka|NOHNPPOK_52); gnlProkkaNOHNPPOK_53 (original name was: gnl|Prokka|NOHNPPOK_53); gnlProkkaNOHNPPOK_54 (original name was: gnl|Prokka|NOHNPPOK_54); gnlProkkaNOHNPPOK_55 (original name was: gnl|Prokka|NOHNPPOK_55); gnlProkkaNOHNPPOK_56 (original name was: gnl|Prokka|NOHNPPOK_56); gnlProkkaNOHNPPOK_57 (original name was: gnl|Prokka|NOHNPPOK_57); gnlProkkaNOHNPPOK_58 (original name was: gnl|Prokka|NOHNPPOK_58); gnlProkkaNOHNPPOK_59 (original name was: gnl|Prokka|NOHNPPOK_59); gnlProkkaNOHNPPOK_60 (original name was: gnl|Prokka|NOHNPPOK_60); gnlProkkaNOHNPPOK_61 (original name was: gnl|Prokka|NOHNPPOK_61); gnlProkkaNOHNPPOK_62 (original name was: gnl|Prokka|NOHNPPOK_62); gnlProkkaNOHNPPOK_63 (original name was: gnl|Prokka|NOHNPPOK_63); gnlProkkaNOHNPPOK_64 (original name was: gnl|Prokka|NOHNPPOK_64); gnlProkkaNOHNPPOK_65 (original name was: gnl|Prokka|NOHNPPOK_65); gnlProkkaNOHNPPOK_66 (original name was: gnl|Prokka|NOHNPPOK_66); gnlProkkaNOHNPPOK_67 (original name was: gnl|Prokka|NOHNPPOK_67); gnlProkkaNOHNPPOK_68 (original name was: gnl|Prokka|NOHNPPOK_68); gnlProkkaNOHNPPOK_69 (original name was: gnl|Prokka|NOHNPPOK_69); gnlProkkaNOHNPPOK_70 (original name was: gnl|Prokka|NOHNPPOK_70); gnlProkkaNOHNPPOK_71 (original name was: gnl|Prokka|NOHNPPOK_71); gnlProkkaNOHNPPOK_72 (original name was: gnl|Prokka|NOHNPPOK_72); gnlProkkaNOHNPPOK_73 (original name was: gnl|Prokka|NOHNPPOK_73); gnlProkkaNOHNPPOK_74 (original name was: gnl|Prokka|NOHNPPOK_74); gnlProkkaNOHNPPOK_75 (original name was: gnl|Prokka|NOHNPPOK_75); gnlProkkaNOHNPPOK_76 (original name was: gnl|Prokka|NOHNPPOK_76); gnlProkkaNOHNPPOK_77 (original name was: gnl|Prokka|NOHNPPOK_77); gnlProkkaNOHNPPOK_78 (original name was: gnl|Prokka|NOHNPPOK_78); gnlProkkaNOHNPPOK_79 (original name was: gnl|Prokka|NOHNPPOK_79); gnlProkkaNOHNPPOK_80 (original name was: gnl|Prokka|NOHNPPOK_80); gnlProkkaNOHNPPOK_81 (original name was: gnl|Prokka|NOHNPPOK_81); gnlProkkaNOHNPPOK_82 (original name was: gnl|Prokka|NOHNPPOK_82); gnlProkkaNOHNPPOK_83 (original name was: gnl|Prokka|NOHNPPOK_83); gnlProkkaNOHNPPOK_84 (original name was: gnl|Prokka|NOHNPPOK_84); gnlProkkaNOHNPPOK_85 (original name was: gnl|Prokka|NOHNPPOK_85); gnlProkkaNOHNPPOK_86 (original name was: gnl|Prokka|NOHNPPOK_86); gnlProkkaNOHNPPOK_87 (original name was: gnl|Prokka|NOHNPPOK_87); gnlProkkaNOHNPPOK_88 (original name was: gnl|Prokka|NOHNPPOK_88); gnlProkkaNOHNPPOK_89 (original name was: gnl|Prokka|NOHNPPOK_89); gnlProkkaNOHNPPOK_90 (original name was: gnl|Prokka|NOHNPPOK_90); gnlProkkaNOHNPPOK_91 (original name was: gnl|Prokka|NOHNPPOK_91); gnlProkkaNOHNPPOK_92 (original name was: gnl|Prokka|NOHNPPOK_92); gnlProkkaNOHNPPOK_93 (original name was: gnl|Prokka|NOHNPPOK_93); gnlProkkaNOHNPPOK_94 (original name was: gnl|Prokka|NOHNPPOK_94); gnlProkkaNOHNPPOK_95 (original name was: gnl|Prokka|NOHNPPOK_95); gnlProkkaNOHNPPOK_96 (original name was: gnl|Prokka|NOHNPPOK_96); gnlProkkaNOHNPPOK_97 (original name was: gnl|Prokka|NOHNPPOK_97)

Compact view

gnlProkkaNOHNPPOK_2 - Region 1 - T3PKS

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Location: 51,970 - 93,139 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNOHNPPOK_9 - Region 1 - cyclic-lactone-autoinducer

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Location: 8,170 - 28,875 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNOHNPPOK_12 - Region 1 - terpene

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Location: 49,165 - 70,046 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNOHNPPOK_13 - Region 1 - RiPP-like

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Location: 42,200 - 54,350 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.