GCA_000712555.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPPOLHAGM_7 (original name was: gnl|Prokka|PPOLHAGM_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	NRPS,T3PKS	88,986	140,970	mutanocyclin/leuvalin/tyrvalin	NRP	53%

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gnlProkkaPPOLHAGM_7 - Region 1 - NRPS,T3PKS

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Location: 88,986 - 140,970 nt. (total: 51,985 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 88985 - 140970:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Leu)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 88985 - 132024:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Leu)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 99812 - 140970:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Leu)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg5_109

Search NORINE for peptide: strict or relaxed

AMP-binding (441..822): Leu

nrpys: Leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DYFTFGLIIK
Nearest Stachelhaus code(s):: Leu DYFTFGLIIK (79% 8Å match)
Stachelhaus code match:: 100% (strong)