GCA_000743895.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJNGOJMDL_6 (original name was: gnl|Prokka|JNGOJMDL_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	T3PKS	132,697	173,866

gnlProkkaJNGOJMDL_17 (original name was: gnl|Prokka|JNGOJMDL_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	3,136	15,286

gnlProkkaJNGOJMDL_23 (original name was: gnl|Prokka|JNGOJMDL_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	cyclic-lactone-autoinducer	8,500	29,205

gnlProkkaJNGOJMDL_78 (original name was: gnl|Prokka|JNGOJMDL_78)

Region	Type	From	To	Most similar known cluster		Similarity
Region 53.1	terpene	26,180	47,061

Region	Type	From	To	Similarity
Region 5.1	T3PKS	132,697	173,866
Region 14.1	RiPP-like	3,136	15,286
Region 18.1	cyclic-lactone-autoinducer	8,500	29,205
Region 53.1	terpene	26,180	47,061

No secondary metabolite regions were found in these records:: gnlProkkaJNGOJMDL_1 (original name was: gnl|Prokka|JNGOJMDL_1); gnlProkkaJNGOJMDL_2 (original name was: gnl|Prokka|JNGOJMDL_2); gnlProkkaJNGOJMDL_3 (original name was: gnl|Prokka|JNGOJMDL_3); gnlProkkaJNGOJMDL_5 (original name was: gnl|Prokka|JNGOJMDL_5); gnlProkkaJNGOJMDL_7 (original name was: gnl|Prokka|JNGOJMDL_7); gnlProkkaJNGOJMDL_9 (original name was: gnl|Prokka|JNGOJMDL_9); gnlProkkaJNGOJMDL_10 (original name was: gnl|Prokka|JNGOJMDL_10); gnlProkkaJNGOJMDL_11 (original name was: gnl|Prokka|JNGOJMDL_11); gnlProkkaJNGOJMDL_12 (original name was: gnl|Prokka|JNGOJMDL_12); gnlProkkaJNGOJMDL_14 (original name was: gnl|Prokka|JNGOJMDL_14); gnlProkkaJNGOJMDL_15 (original name was: gnl|Prokka|JNGOJMDL_15); gnlProkkaJNGOJMDL_16 (original name was: gnl|Prokka|JNGOJMDL_16); gnlProkkaJNGOJMDL_18 (original name was: gnl|Prokka|JNGOJMDL_18); gnlProkkaJNGOJMDL_19 (original name was: gnl|Prokka|JNGOJMDL_19); gnlProkkaJNGOJMDL_20 (original name was: gnl|Prokka|JNGOJMDL_20); gnlProkkaJNGOJMDL_24 (original name was: gnl|Prokka|JNGOJMDL_24); gnlProkkaJNGOJMDL_27 (original name was: gnl|Prokka|JNGOJMDL_27); gnlProkkaJNGOJMDL_28 (original name was: gnl|Prokka|JNGOJMDL_28); gnlProkkaJNGOJMDL_29 (original name was: gnl|Prokka|JNGOJMDL_29); gnlProkkaJNGOJMDL_30 (original name was: gnl|Prokka|JNGOJMDL_30); gnlProkkaJNGOJMDL_32 (original name was: gnl|Prokka|JNGOJMDL_32); gnlProkkaJNGOJMDL_35 (original name was: gnl|Prokka|JNGOJMDL_35); gnlProkkaJNGOJMDL_38 (original name was: gnl|Prokka|JNGOJMDL_38); gnlProkkaJNGOJMDL_41 (original name was: gnl|Prokka|JNGOJMDL_41); gnlProkkaJNGOJMDL_42 (original name was: gnl|Prokka|JNGOJMDL_42); gnlProkkaJNGOJMDL_43 (original name was: gnl|Prokka|JNGOJMDL_43); gnlProkkaJNGOJMDL_46 (original name was: gnl|Prokka|JNGOJMDL_46); gnlProkkaJNGOJMDL_48 (original name was: gnl|Prokka|JNGOJMDL_48); gnlProkkaJNGOJMDL_50 (original name was: gnl|Prokka|JNGOJMDL_50); gnlProkkaJNGOJMDL_51 (original name was: gnl|Prokka|JNGOJMDL_51); gnlProkkaJNGOJMDL_52 (original name was: gnl|Prokka|JNGOJMDL_52); gnlProkkaJNGOJMDL_54 (original name was: gnl|Prokka|JNGOJMDL_54); gnlProkkaJNGOJMDL_55 (original name was: gnl|Prokka|JNGOJMDL_55); gnlProkkaJNGOJMDL_57 (original name was: gnl|Prokka|JNGOJMDL_57); gnlProkkaJNGOJMDL_59 (original name was: gnl|Prokka|JNGOJMDL_59); gnlProkkaJNGOJMDL_60 (original name was: gnl|Prokka|JNGOJMDL_60); gnlProkkaJNGOJMDL_61 (original name was: gnl|Prokka|JNGOJMDL_61); gnlProkkaJNGOJMDL_62 (original name was: gnl|Prokka|JNGOJMDL_62); gnlProkkaJNGOJMDL_63 (original name was: gnl|Prokka|JNGOJMDL_63); gnlProkkaJNGOJMDL_64 (original name was: gnl|Prokka|JNGOJMDL_64); gnlProkkaJNGOJMDL_65 (original name was: gnl|Prokka|JNGOJMDL_65); gnlProkkaJNGOJMDL_67 (original name was: gnl|Prokka|JNGOJMDL_67); gnlProkkaJNGOJMDL_68 (original name was: gnl|Prokka|JNGOJMDL_68); gnlProkkaJNGOJMDL_69 (original name was: gnl|Prokka|JNGOJMDL_69); gnlProkkaJNGOJMDL_70 (original name was: gnl|Prokka|JNGOJMDL_70); gnlProkkaJNGOJMDL_71 (original name was: gnl|Prokka|JNGOJMDL_71); gnlProkkaJNGOJMDL_73 (original name was: gnl|Prokka|JNGOJMDL_73); gnlProkkaJNGOJMDL_74 (original name was: gnl|Prokka|JNGOJMDL_74); gnlProkkaJNGOJMDL_75 (original name was: gnl|Prokka|JNGOJMDL_75); gnlProkkaJNGOJMDL_79 (original name was: gnl|Prokka|JNGOJMDL_79); gnlProkkaJNGOJMDL_80 (original name was: gnl|Prokka|JNGOJMDL_80); gnlProkkaJNGOJMDL_81 (original name was: gnl|Prokka|JNGOJMDL_81); gnlProkkaJNGOJMDL_82 (original name was: gnl|Prokka|JNGOJMDL_82); gnlProkkaJNGOJMDL_83 (original name was: gnl|Prokka|JNGOJMDL_83)

Compact view

gnlProkkaJNGOJMDL_6 - Region 1 - T3PKS

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Location: 132,697 - 173,866 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJNGOJMDL_17 - Region 1 - RiPP-like

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Location: 3,136 - 15,286 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJNGOJMDL_23 - Region 1 - cyclic-lactone-autoinducer

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Location: 8,500 - 29,205 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJNGOJMDL_78 - Region 1 - terpene

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Location: 26,180 - 47,061 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.