GCA_000758185.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFLFCCJAE_2 (original name was: gnl|Prokka|FLFCCJAE_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	lassopeptide	21,420	31,567

gnlProkkaFLFCCJAE_13 (original name was: gnl|Prokka|FLFCCJAE_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	RiPP-like	1	11,860

gnlProkkaFLFCCJAE_19 (original name was: gnl|Prokka|FLFCCJAE_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	lassopeptide	1	10,148

gnlProkkaFLFCCJAE_36 (original name was: gnl|Prokka|FLFCCJAE_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	T3PKS,NRPS,NRPS-like	98,074	151,606	mutanocyclin/leuvalin/tyrvalin	NRP	53%

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	lassopeptide	21,420	31,567
Region 13.1	RiPP-like	1	11,860
Region 19.1	lassopeptide	1	10,148
Region 36.1	T3PKS,NRPS,NRPS-like	98,074	151,606	mutanocyclin/leuvalin/tyrvalin	NRP	53%

Compact view

gnlProkkaFLFCCJAE_2 - Region 1 - lassopeptide

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Location: 21,420 - 31,567 nt. (total: 10,148 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

gnlProkkaFLFCCJAE_13 - Region 1 - RiPP-like

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Location: 1 - 11,860 nt. (total: 11,860 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFLFCCJAE_19 - Region 1 - lassopeptide

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Location: 1 - 10,148 nt. (total: 10,148 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

gnlProkkaFLFCCJAE_36 - Region 1 - NRPS,NRPS-like,T3PKS

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Location: 98,074 - 151,606 nt. (total: 53,533 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)
NRPS: cds(Condensation and (AMP-binding or A-OX))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1