GCA_000814485.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLOMJKLMD_1 (original name was: gnl|Prokka|LOMJKLMD_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	226,416	256,662

gnlProkkaLOMJKLMD_40 (original name was: gnl|Prokka|LOMJKLMD_40)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	RiPP-like	14,637	23,675

gnlProkkaLOMJKLMD_46 (original name was: gnl|Prokka|LOMJKLMD_46)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	RiPP-like	1	8,934

Region	Type	From	To	Similarity
Region 1.1	T3PKS	226,416	256,662
Region 40.1	RiPP-like	14,637	23,675
Region 46.1	RiPP-like	1	8,934

No secondary metabolite regions were found in these records:: gnlProkkaLOMJKLMD_2 (original name was: gnl|Prokka|LOMJKLMD_2); gnlProkkaLOMJKLMD_3 (original name was: gnl|Prokka|LOMJKLMD_3); gnlProkkaLOMJKLMD_4 (original name was: gnl|Prokka|LOMJKLMD_4); gnlProkkaLOMJKLMD_5 (original name was: gnl|Prokka|LOMJKLMD_5); gnlProkkaLOMJKLMD_6 (original name was: gnl|Prokka|LOMJKLMD_6); gnlProkkaLOMJKLMD_7 (original name was: gnl|Prokka|LOMJKLMD_7); gnlProkkaLOMJKLMD_8 (original name was: gnl|Prokka|LOMJKLMD_8); gnlProkkaLOMJKLMD_9 (original name was: gnl|Prokka|LOMJKLMD_9); gnlProkkaLOMJKLMD_10 (original name was: gnl|Prokka|LOMJKLMD_10); gnlProkkaLOMJKLMD_11 (original name was: gnl|Prokka|LOMJKLMD_11); gnlProkkaLOMJKLMD_12 (original name was: gnl|Prokka|LOMJKLMD_12); gnlProkkaLOMJKLMD_13 (original name was: gnl|Prokka|LOMJKLMD_13); gnlProkkaLOMJKLMD_14 (original name was: gnl|Prokka|LOMJKLMD_14); gnlProkkaLOMJKLMD_15 (original name was: gnl|Prokka|LOMJKLMD_15); gnlProkkaLOMJKLMD_16 (original name was: gnl|Prokka|LOMJKLMD_16); gnlProkkaLOMJKLMD_17 (original name was: gnl|Prokka|LOMJKLMD_17); gnlProkkaLOMJKLMD_18 (original name was: gnl|Prokka|LOMJKLMD_18); gnlProkkaLOMJKLMD_19 (original name was: gnl|Prokka|LOMJKLMD_19); gnlProkkaLOMJKLMD_20 (original name was: gnl|Prokka|LOMJKLMD_20); gnlProkkaLOMJKLMD_21 (original name was: gnl|Prokka|LOMJKLMD_21); gnlProkkaLOMJKLMD_22 (original name was: gnl|Prokka|LOMJKLMD_22); gnlProkkaLOMJKLMD_23 (original name was: gnl|Prokka|LOMJKLMD_23); gnlProkkaLOMJKLMD_24 (original name was: gnl|Prokka|LOMJKLMD_24); gnlProkkaLOMJKLMD_25 (original name was: gnl|Prokka|LOMJKLMD_25); gnlProkkaLOMJKLMD_26 (original name was: gnl|Prokka|LOMJKLMD_26); gnlProkkaLOMJKLMD_27 (original name was: gnl|Prokka|LOMJKLMD_27); gnlProkkaLOMJKLMD_28 (original name was: gnl|Prokka|LOMJKLMD_28); gnlProkkaLOMJKLMD_29 (original name was: gnl|Prokka|LOMJKLMD_29); gnlProkkaLOMJKLMD_30 (original name was: gnl|Prokka|LOMJKLMD_30); gnlProkkaLOMJKLMD_31 (original name was: gnl|Prokka|LOMJKLMD_31); gnlProkkaLOMJKLMD_32 (original name was: gnl|Prokka|LOMJKLMD_32); gnlProkkaLOMJKLMD_33 (original name was: gnl|Prokka|LOMJKLMD_33); gnlProkkaLOMJKLMD_34 (original name was: gnl|Prokka|LOMJKLMD_34); gnlProkkaLOMJKLMD_35 (original name was: gnl|Prokka|LOMJKLMD_35); gnlProkkaLOMJKLMD_36 (original name was: gnl|Prokka|LOMJKLMD_36); gnlProkkaLOMJKLMD_37 (original name was: gnl|Prokka|LOMJKLMD_37); gnlProkkaLOMJKLMD_38 (original name was: gnl|Prokka|LOMJKLMD_38); gnlProkkaLOMJKLMD_39 (original name was: gnl|Prokka|LOMJKLMD_39); gnlProkkaLOMJKLMD_41 (original name was: gnl|Prokka|LOMJKLMD_41); gnlProkkaLOMJKLMD_42 (original name was: gnl|Prokka|LOMJKLMD_42); gnlProkkaLOMJKLMD_43 (original name was: gnl|Prokka|LOMJKLMD_43); gnlProkkaLOMJKLMD_44 (original name was: gnl|Prokka|LOMJKLMD_44); gnlProkkaLOMJKLMD_45 (original name was: gnl|Prokka|LOMJKLMD_45); gnlProkkaLOMJKLMD_47 (original name was: gnl|Prokka|LOMJKLMD_47); gnlProkkaLOMJKLMD_48 (original name was: gnl|Prokka|LOMJKLMD_48); gnlProkkaLOMJKLMD_49 (original name was: gnl|Prokka|LOMJKLMD_49); gnlProkkaLOMJKLMD_50 (original name was: gnl|Prokka|LOMJKLMD_50); gnlProkkaLOMJKLMD_51 (original name was: gnl|Prokka|LOMJKLMD_51); gnlProkkaLOMJKLMD_52 (original name was: gnl|Prokka|LOMJKLMD_52); gnlProkkaLOMJKLMD_53 (original name was: gnl|Prokka|LOMJKLMD_53); gnlProkkaLOMJKLMD_54 (original name was: gnl|Prokka|LOMJKLMD_54); gnlProkkaLOMJKLMD_55 (original name was: gnl|Prokka|LOMJKLMD_55); gnlProkkaLOMJKLMD_56 (original name was: gnl|Prokka|LOMJKLMD_56); gnlProkkaLOMJKLMD_57 (original name was: gnl|Prokka|LOMJKLMD_57); gnlProkkaLOMJKLMD_58 (original name was: gnl|Prokka|LOMJKLMD_58); gnlProkkaLOMJKLMD_59 (original name was: gnl|Prokka|LOMJKLMD_59); gnlProkkaLOMJKLMD_60 (original name was: gnl|Prokka|LOMJKLMD_60); gnlProkkaLOMJKLMD_61 (original name was: gnl|Prokka|LOMJKLMD_61); gnlProkkaLOMJKLMD_62 (original name was: gnl|Prokka|LOMJKLMD_62); gnlProkkaLOMJKLMD_63 (original name was: gnl|Prokka|LOMJKLMD_63); gnlProkkaLOMJKLMD_64 (original name was: gnl|Prokka|LOMJKLMD_64); gnlProkkaLOMJKLMD_65 (original name was: gnl|Prokka|LOMJKLMD_65)

Compact view

gnlProkkaLOMJKLMD_1 - Region 1 - T3PKS

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Location: 226,416 - 256,662 nt. (total: 30,247 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLOMJKLMD_40 - Region 1 - RiPP-like

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Location: 14,637 - 23,675 nt. (total: 9,039 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLOMJKLMD_46 - Region 1 - RiPP-like

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Location: 1 - 8,934 nt. (total: 8,934 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.