GCA_000825005.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBODEIOGG_9 (original name was: gnl|Prokka|BODEIOGG_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	5,002	15,373

gnlProkkaBODEIOGG_10 (original name was: gnl|Prokka|BODEIOGG_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	lanthipeptide-class-iii	6,423	29,080

gnlProkkaBODEIOGG_34 (original name was: gnl|Prokka|BODEIOGG_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RiPP-like	47,464	57,859

Region	Type	From	To	Similarity
Region 9.1	RiPP-like	5,002	15,373
Region 10.1	lanthipeptide-class-iii	6,423	29,080
Region 34.1	RiPP-like	47,464	57,859

No secondary metabolite regions were found in these records:: gnlProkkaBODEIOGG_1 (original name was: gnl|Prokka|BODEIOGG_1); gnlProkkaBODEIOGG_2 (original name was: gnl|Prokka|BODEIOGG_2); gnlProkkaBODEIOGG_3 (original name was: gnl|Prokka|BODEIOGG_3); gnlProkkaBODEIOGG_4 (original name was: gnl|Prokka|BODEIOGG_4); gnlProkkaBODEIOGG_5 (original name was: gnl|Prokka|BODEIOGG_5); gnlProkkaBODEIOGG_6 (original name was: gnl|Prokka|BODEIOGG_6); gnlProkkaBODEIOGG_7 (original name was: gnl|Prokka|BODEIOGG_7); gnlProkkaBODEIOGG_8 (original name was: gnl|Prokka|BODEIOGG_8); gnlProkkaBODEIOGG_11 (original name was: gnl|Prokka|BODEIOGG_11); gnlProkkaBODEIOGG_12 (original name was: gnl|Prokka|BODEIOGG_12); gnlProkkaBODEIOGG_13 (original name was: gnl|Prokka|BODEIOGG_13); gnlProkkaBODEIOGG_14 (original name was: gnl|Prokka|BODEIOGG_14); gnlProkkaBODEIOGG_15 (original name was: gnl|Prokka|BODEIOGG_15); gnlProkkaBODEIOGG_16 (original name was: gnl|Prokka|BODEIOGG_16); gnlProkkaBODEIOGG_17 (original name was: gnl|Prokka|BODEIOGG_17); gnlProkkaBODEIOGG_18 (original name was: gnl|Prokka|BODEIOGG_18); gnlProkkaBODEIOGG_19 (original name was: gnl|Prokka|BODEIOGG_19); gnlProkkaBODEIOGG_20 (original name was: gnl|Prokka|BODEIOGG_20); gnlProkkaBODEIOGG_21 (original name was: gnl|Prokka|BODEIOGG_21); gnlProkkaBODEIOGG_22 (original name was: gnl|Prokka|BODEIOGG_22); gnlProkkaBODEIOGG_23 (original name was: gnl|Prokka|BODEIOGG_23); gnlProkkaBODEIOGG_24 (original name was: gnl|Prokka|BODEIOGG_24); gnlProkkaBODEIOGG_25 (original name was: gnl|Prokka|BODEIOGG_25); gnlProkkaBODEIOGG_26 (original name was: gnl|Prokka|BODEIOGG_26); gnlProkkaBODEIOGG_27 (original name was: gnl|Prokka|BODEIOGG_27); gnlProkkaBODEIOGG_28 (original name was: gnl|Prokka|BODEIOGG_28); gnlProkkaBODEIOGG_29 (original name was: gnl|Prokka|BODEIOGG_29); gnlProkkaBODEIOGG_30 (original name was: gnl|Prokka|BODEIOGG_30); gnlProkkaBODEIOGG_31 (original name was: gnl|Prokka|BODEIOGG_31); gnlProkkaBODEIOGG_32 (original name was: gnl|Prokka|BODEIOGG_32); gnlProkkaBODEIOGG_33 (original name was: gnl|Prokka|BODEIOGG_33); gnlProkkaBODEIOGG_35 (original name was: gnl|Prokka|BODEIOGG_35); gnlProkkaBODEIOGG_36 (original name was: gnl|Prokka|BODEIOGG_36); gnlProkkaBODEIOGG_37 (original name was: gnl|Prokka|BODEIOGG_37); gnlProkkaBODEIOGG_38 (original name was: gnl|Prokka|BODEIOGG_38); gnlProkkaBODEIOGG_39 (original name was: gnl|Prokka|BODEIOGG_39); gnlProkkaBODEIOGG_40 (original name was: gnl|Prokka|BODEIOGG_40); gnlProkkaBODEIOGG_41 (original name was: gnl|Prokka|BODEIOGG_41); gnlProkkaBODEIOGG_42 (original name was: gnl|Prokka|BODEIOGG_42); gnlProkkaBODEIOGG_43 (original name was: gnl|Prokka|BODEIOGG_43); gnlProkkaBODEIOGG_44 (original name was: gnl|Prokka|BODEIOGG_44); gnlProkkaBODEIOGG_45 (original name was: gnl|Prokka|BODEIOGG_45); gnlProkkaBODEIOGG_46 (original name was: gnl|Prokka|BODEIOGG_46); gnlProkkaBODEIOGG_47 (original name was: gnl|Prokka|BODEIOGG_47); gnlProkkaBODEIOGG_48 (original name was: gnl|Prokka|BODEIOGG_48); gnlProkkaBODEIOGG_49 (original name was: gnl|Prokka|BODEIOGG_49); gnlProkkaBODEIOGG_50 (original name was: gnl|Prokka|BODEIOGG_50); gnlProkkaBODEIOGG_51 (original name was: gnl|Prokka|BODEIOGG_51); gnlProkkaBODEIOGG_52 (original name was: gnl|Prokka|BODEIOGG_52); gnlProkkaBODEIOGG_53 (original name was: gnl|Prokka|BODEIOGG_53); gnlProkkaBODEIOGG_54 (original name was: gnl|Prokka|BODEIOGG_54); gnlProkkaBODEIOGG_55 (original name was: gnl|Prokka|BODEIOGG_55); gnlProkkaBODEIOGG_56 (original name was: gnl|Prokka|BODEIOGG_56); gnlProkkaBODEIOGG_57 (original name was: gnl|Prokka|BODEIOGG_57)

Compact view

gnlProkkaBODEIOGG_9 - Region 1 - RiPP-like

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Location: 5,002 - 15,373 nt. (total: 10,372 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBODEIOGG_10 - Region 1 - lanthipeptide-class-iii

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Location: 6,423 - 29,080 nt. (total: 22,658 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaBODEIOGG_34 - Region 1 - RiPP-like

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Location: 47,464 - 57,859 nt. (total: 10,396 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.