GCA_000825025.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPOCBCFMK_10 (original name was: gnl|Prokka|POCBCFMK_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	RiPP-like	5,019	15,357

gnlProkkaPOCBCFMK_11 (original name was: gnl|Prokka|POCBCFMK_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	lanthipeptide-class-iii	6,477	29,134

gnlProkkaPOCBCFMK_43 (original name was: gnl|Prokka|POCBCFMK_43)

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	RiPP-like	100,980	111,375

Region	Type	From	To	Similarity
Region 10.1	RiPP-like	5,019	15,357
Region 11.1	lanthipeptide-class-iii	6,477	29,134
Region 43.1	RiPP-like	100,980	111,375

No secondary metabolite regions were found in these records:: gnlProkkaPOCBCFMK_1 (original name was: gnl|Prokka|POCBCFMK_1); gnlProkkaPOCBCFMK_2 (original name was: gnl|Prokka|POCBCFMK_2); gnlProkkaPOCBCFMK_3 (original name was: gnl|Prokka|POCBCFMK_3); gnlProkkaPOCBCFMK_4 (original name was: gnl|Prokka|POCBCFMK_4); gnlProkkaPOCBCFMK_5 (original name was: gnl|Prokka|POCBCFMK_5); gnlProkkaPOCBCFMK_6 (original name was: gnl|Prokka|POCBCFMK_6); gnlProkkaPOCBCFMK_7 (original name was: gnl|Prokka|POCBCFMK_7); gnlProkkaPOCBCFMK_8 (original name was: gnl|Prokka|POCBCFMK_8); gnlProkkaPOCBCFMK_9 (original name was: gnl|Prokka|POCBCFMK_9); gnlProkkaPOCBCFMK_12 (original name was: gnl|Prokka|POCBCFMK_12); gnlProkkaPOCBCFMK_13 (original name was: gnl|Prokka|POCBCFMK_13); gnlProkkaPOCBCFMK_14 (original name was: gnl|Prokka|POCBCFMK_14); gnlProkkaPOCBCFMK_15 (original name was: gnl|Prokka|POCBCFMK_15); gnlProkkaPOCBCFMK_16 (original name was: gnl|Prokka|POCBCFMK_16); gnlProkkaPOCBCFMK_17 (original name was: gnl|Prokka|POCBCFMK_17); gnlProkkaPOCBCFMK_18 (original name was: gnl|Prokka|POCBCFMK_18); gnlProkkaPOCBCFMK_19 (original name was: gnl|Prokka|POCBCFMK_19); gnlProkkaPOCBCFMK_20 (original name was: gnl|Prokka|POCBCFMK_20); gnlProkkaPOCBCFMK_21 (original name was: gnl|Prokka|POCBCFMK_21); gnlProkkaPOCBCFMK_22 (original name was: gnl|Prokka|POCBCFMK_22); gnlProkkaPOCBCFMK_23 (original name was: gnl|Prokka|POCBCFMK_23); gnlProkkaPOCBCFMK_24 (original name was: gnl|Prokka|POCBCFMK_24); gnlProkkaPOCBCFMK_25 (original name was: gnl|Prokka|POCBCFMK_25); gnlProkkaPOCBCFMK_26 (original name was: gnl|Prokka|POCBCFMK_26); gnlProkkaPOCBCFMK_27 (original name was: gnl|Prokka|POCBCFMK_27); gnlProkkaPOCBCFMK_28 (original name was: gnl|Prokka|POCBCFMK_28); gnlProkkaPOCBCFMK_29 (original name was: gnl|Prokka|POCBCFMK_29); gnlProkkaPOCBCFMK_30 (original name was: gnl|Prokka|POCBCFMK_30); gnlProkkaPOCBCFMK_31 (original name was: gnl|Prokka|POCBCFMK_31); gnlProkkaPOCBCFMK_32 (original name was: gnl|Prokka|POCBCFMK_32); gnlProkkaPOCBCFMK_33 (original name was: gnl|Prokka|POCBCFMK_33); gnlProkkaPOCBCFMK_34 (original name was: gnl|Prokka|POCBCFMK_34); gnlProkkaPOCBCFMK_35 (original name was: gnl|Prokka|POCBCFMK_35); gnlProkkaPOCBCFMK_36 (original name was: gnl|Prokka|POCBCFMK_36); gnlProkkaPOCBCFMK_37 (original name was: gnl|Prokka|POCBCFMK_37); gnlProkkaPOCBCFMK_38 (original name was: gnl|Prokka|POCBCFMK_38); gnlProkkaPOCBCFMK_39 (original name was: gnl|Prokka|POCBCFMK_39); gnlProkkaPOCBCFMK_40 (original name was: gnl|Prokka|POCBCFMK_40); gnlProkkaPOCBCFMK_41 (original name was: gnl|Prokka|POCBCFMK_41); gnlProkkaPOCBCFMK_42 (original name was: gnl|Prokka|POCBCFMK_42); gnlProkkaPOCBCFMK_44 (original name was: gnl|Prokka|POCBCFMK_44); gnlProkkaPOCBCFMK_45 (original name was: gnl|Prokka|POCBCFMK_45); gnlProkkaPOCBCFMK_46 (original name was: gnl|Prokka|POCBCFMK_46); gnlProkkaPOCBCFMK_47 (original name was: gnl|Prokka|POCBCFMK_47); gnlProkkaPOCBCFMK_48 (original name was: gnl|Prokka|POCBCFMK_48); gnlProkkaPOCBCFMK_49 (original name was: gnl|Prokka|POCBCFMK_49); gnlProkkaPOCBCFMK_50 (original name was: gnl|Prokka|POCBCFMK_50); gnlProkkaPOCBCFMK_51 (original name was: gnl|Prokka|POCBCFMK_51); gnlProkkaPOCBCFMK_52 (original name was: gnl|Prokka|POCBCFMK_52); gnlProkkaPOCBCFMK_53 (original name was: gnl|Prokka|POCBCFMK_53); gnlProkkaPOCBCFMK_54 (original name was: gnl|Prokka|POCBCFMK_54); gnlProkkaPOCBCFMK_55 (original name was: gnl|Prokka|POCBCFMK_55); gnlProkkaPOCBCFMK_56 (original name was: gnl|Prokka|POCBCFMK_56); gnlProkkaPOCBCFMK_57 (original name was: gnl|Prokka|POCBCFMK_57); gnlProkkaPOCBCFMK_58 (original name was: gnl|Prokka|POCBCFMK_58); gnlProkkaPOCBCFMK_59 (original name was: gnl|Prokka|POCBCFMK_59); gnlProkkaPOCBCFMK_60 (original name was: gnl|Prokka|POCBCFMK_60); gnlProkkaPOCBCFMK_61 (original name was: gnl|Prokka|POCBCFMK_61); gnlProkkaPOCBCFMK_62 (original name was: gnl|Prokka|POCBCFMK_62); gnlProkkaPOCBCFMK_63 (original name was: gnl|Prokka|POCBCFMK_63); gnlProkkaPOCBCFMK_64 (original name was: gnl|Prokka|POCBCFMK_64); gnlProkkaPOCBCFMK_65 (original name was: gnl|Prokka|POCBCFMK_65); gnlProkkaPOCBCFMK_66 (original name was: gnl|Prokka|POCBCFMK_66); gnlProkkaPOCBCFMK_67 (original name was: gnl|Prokka|POCBCFMK_67); gnlProkkaPOCBCFMK_68 (original name was: gnl|Prokka|POCBCFMK_68)

Compact view

gnlProkkaPOCBCFMK_10 - Region 1 - RiPP-like

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Location: 5,019 - 15,357 nt. (total: 10,339 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPOCBCFMK_11 - Region 1 - lanthipeptide-class-iii

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Location: 6,477 - 29,134 nt. (total: 22,658 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaPOCBCFMK_43 - Region 1 - RiPP-like

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Location: 100,980 - 111,375 nt. (total: 10,396 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.