GCA_000830535.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMHFCAHFK_6 (original name was: gnl|Prokka|MHFCAHFK_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	cyclic-lactone-autoinducer	7,025	27,730	auriculamide	NRP	9%

gnlProkkaMHFCAHFK_9 (original name was: gnl|Prokka|MHFCAHFK_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	106,518	118,668

gnlProkkaMHFCAHFK_11 (original name was: gnl|Prokka|MHFCAHFK_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	82,941	106,839

gnlProkkaMHFCAHFK_14 (original name was: gnl|Prokka|MHFCAHFK_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	terpene	26,121	47,002

No secondary metabolite regions were found in these records:: gnlProkkaMHFCAHFK_1 (original name was: gnl|Prokka|MHFCAHFK_1); gnlProkkaMHFCAHFK_2 (original name was: gnl|Prokka|MHFCAHFK_2); gnlProkkaMHFCAHFK_3 (original name was: gnl|Prokka|MHFCAHFK_3); gnlProkkaMHFCAHFK_4 (original name was: gnl|Prokka|MHFCAHFK_4); gnlProkkaMHFCAHFK_5 (original name was: gnl|Prokka|MHFCAHFK_5); gnlProkkaMHFCAHFK_7 (original name was: gnl|Prokka|MHFCAHFK_7); gnlProkkaMHFCAHFK_8 (original name was: gnl|Prokka|MHFCAHFK_8); gnlProkkaMHFCAHFK_10 (original name was: gnl|Prokka|MHFCAHFK_10); gnlProkkaMHFCAHFK_12 (original name was: gnl|Prokka|MHFCAHFK_12); gnlProkkaMHFCAHFK_13 (original name was: gnl|Prokka|MHFCAHFK_13); gnlProkkaMHFCAHFK_15 (original name was: gnl|Prokka|MHFCAHFK_15); gnlProkkaMHFCAHFK_16 (original name was: gnl|Prokka|MHFCAHFK_16); gnlProkkaMHFCAHFK_17 (original name was: gnl|Prokka|MHFCAHFK_17); gnlProkkaMHFCAHFK_18 (original name was: gnl|Prokka|MHFCAHFK_18); gnlProkkaMHFCAHFK_19 (original name was: gnl|Prokka|MHFCAHFK_19); gnlProkkaMHFCAHFK_20 (original name was: gnl|Prokka|MHFCAHFK_20); gnlProkkaMHFCAHFK_21 (original name was: gnl|Prokka|MHFCAHFK_21); gnlProkkaMHFCAHFK_22 (original name was: gnl|Prokka|MHFCAHFK_22); gnlProkkaMHFCAHFK_23 (original name was: gnl|Prokka|MHFCAHFK_23); gnlProkkaMHFCAHFK_24 (original name was: gnl|Prokka|MHFCAHFK_24); gnlProkkaMHFCAHFK_25 (original name was: gnl|Prokka|MHFCAHFK_25); gnlProkkaMHFCAHFK_26 (original name was: gnl|Prokka|MHFCAHFK_26); gnlProkkaMHFCAHFK_27 (original name was: gnl|Prokka|MHFCAHFK_27); gnlProkkaMHFCAHFK_28 (original name was: gnl|Prokka|MHFCAHFK_28); gnlProkkaMHFCAHFK_29 (original name was: gnl|Prokka|MHFCAHFK_29); gnlProkkaMHFCAHFK_30 (original name was: gnl|Prokka|MHFCAHFK_30); gnlProkkaMHFCAHFK_31 (original name was: gnl|Prokka|MHFCAHFK_31); gnlProkkaMHFCAHFK_32 (original name was: gnl|Prokka|MHFCAHFK_32); gnlProkkaMHFCAHFK_33 (original name was: gnl|Prokka|MHFCAHFK_33); gnlProkkaMHFCAHFK_34 (original name was: gnl|Prokka|MHFCAHFK_34); gnlProkkaMHFCAHFK_35 (original name was: gnl|Prokka|MHFCAHFK_35)

Compact view

gnlProkkaMHFCAHFK_6 - Region 1 - cyclic-lactone-autoinducer

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Location: 7,025 - 27,730 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaMHFCAHFK_9 - Region 1 - RiPP-like

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Location: 106,518 - 118,668 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMHFCAHFK_11 - Region 1 - T3PKS

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Location: 82,941 - 106,839 nt. (total: 23,899 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMHFCAHFK_14 - Region 1 - terpene

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Location: 26,121 - 47,002 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.