GCA_000878265.1 - 12 region(s)

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	terpene	221,644	242,447
Region 2.2	NRPS-like,betalactone,NRPS	933,672	984,564	fengycin	NRP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	terpene	60,180	81,100
Region 3.2	T3PKS	129,854	170,318	1-carbapen-2-em-3-carboxylic acid	Other	16%

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	lanthipeptide-class-ii,cyclic-lactone-autoinducer	279,781	304,970	amyloliquecidin GF610	RiPP	80%
Region 4.2	NRPS	510,903	576,294	surfactin	NRP:Lipopeptide	78%
Region 4.3	RiPP-like	582,816	593,202
Region 4.4	NRPS-like	697,076	740,483	locillomycin/locillomycin B/locillomycin C	NRP+Polyketide	28%

Region	Type	From	To	Most similar known cluster	Similarity
Region 6.1	lanthipeptide-class-ii	66,427	89,615	mersacidin	RiPP:Lanthipeptide	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 13.1	NRP-metallophore,NRPS	80,037	131,814	bacillibactin	NRP	100%
Region 13.2	lanthipeptide-class-i	314,751	340,716	subtilin	RiPP:Lanthipeptide	92%
Region 13.3	sactipeptide	698,899	720,504	subtilosin A	RiPP:Thiopeptide	75%

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	terpene	221,644	242,447
Region 2.2	NRPS-like,betalactone,NRPS	933,672	984,564	fengycin	NRP	100%
Region 3.1	terpene	60,180	81,100
Region 3.2	T3PKS	129,854	170,318	1-carbapen-2-em-3-carboxylic acid	Other	16%
Region 4.1	lanthipeptide-class-ii,cyclic-lactone-autoinducer	279,781	304,970	amyloliquecidin GF610	RiPP	80%
Region 4.2	NRPS	510,903	576,294	surfactin	NRP:Lipopeptide	78%
Region 4.3	RiPP-like	582,816	593,202
Region 4.4	NRPS-like	697,076	740,483	locillomycin/locillomycin B/locillomycin C	NRP+Polyketide	28%
Region 6.1	lanthipeptide-class-ii	66,427	89,615	mersacidin	RiPP:Lanthipeptide	100%
Region 13.1	NRP-metallophore,NRPS	80,037	131,814	bacillibactin	NRP	100%
Region 13.2	lanthipeptide-class-i	314,751	340,716	subtilin	RiPP:Lanthipeptide	92%
Region 13.3	sactipeptide	698,899	720,504	subtilosin A	RiPP:Thiopeptide	75%

gnlProkkaNNGJICEO_2 - Region 1 - terpene

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Location: 221,644 - 242,447 nt. (total: 20,804 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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gnlProkkaNNGJICEO_2 - Region 2 - NRPS,NRPS-like,betalactone

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Location: 933,672 - 984,564 nt. (total: 50,893 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
betalactone: (HMGL-like and AMP-binding)
NRPS: cds(Condensation and (AMP-binding or A-OX))

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gnlProkkaNNGJICEO_3 - Region 1 - terpene

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Location: 60,180 - 81,100 nt. (total: 20,921 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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resistance

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gnlProkkaNNGJICEO_3 - Region 2 - T3PKS

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Location: 129,854 - 170,318 nt. (total: 40,465 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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gnlProkkaNNGJICEO_4 - Region 1 - cyclic-lactone-autoinducer,lanthipeptide-class-ii

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Location: 279,781 - 304,970 nt. (total: 25,190 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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gnlProkkaNNGJICEO_4 - Region 2 - NRPS

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Location: 510,903 - 576,294 nt. (total: 65,392 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

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gnlProkkaNNGJICEO_4 - Region 3 - RiPP-like

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Location: 582,816 - 593,202 nt. (total: 10,387 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

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gnlProkkaNNGJICEO_4 - Region 4 - NRPS-like

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Location: 697,076 - 740,483 nt. (total: 43,408 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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other genes

resistance

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gnlProkkaNNGJICEO_6 - Region 1 - lanthipeptide-class-ii

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Location: 66,427 - 89,615 nt. (total: 23,189 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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gnlProkkaNNGJICEO_13 - Region 1 - NRP-metallophore,NRPS

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Location: 80,037 - 131,814 nt. (total: 51,778 nt) Show pHMM detection rules used

NRP-metallophore: (VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))
NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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gnlProkkaNNGJICEO_13 - Region 2 - lanthipeptide-class-i

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Location: 314,751 - 340,716 nt. (total: 25,966 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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other genes

resistance

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gnlProkkaNNGJICEO_13 - Region 3 - sactipeptide

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Location: 698,899 - 720,504 nt. (total: 21,606 nt) Show pHMM detection rules used

sactipeptide: (subtilosin or thuricin or TIGR04404 or Subtilosin_A or skfc)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identified secondary metabolite regions using strictness 'relaxed'

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Lanthipeptide(s) for ctg4_290

MIBiG 3.1 matches for ctg4_291

antiSMASH-DB 4.0 matches for ctg4_291

antiSMASH-DB 4.0 matches for allorf_297835_298032

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Lanthipeptide(s) for ctg6_92

MIBiG 3.1 matches for ctg6_88

antiSMASH-DB 4.0 matches for ctg6_88

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Lanthipeptide(s) for ctg13_359

MIBiG 3.1 matches for allorf_324552_324671

antiSMASH-DB 4.0 matches for allorf_324552_324671

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Sactipeptide(s) for ctg13_765

antiSMASH-DB 4.0 matches for ctg13_765