## Thu May  1 23:07:22 2025
## emapper-2.1.12
## /home/m128030022/anaconda3/envs/eggnog/bin/emapper.py -i /home/m128030022/prbbiotics_cp/prokka_results/GCA_000973605.1/GCA_000973605.1.faa --temp_dir /home/m128030022/prbbiotics_cp/probiotics_new/databases/probiotics_DB/probiotics_db/GCA_000973605.1/2.eggNOGmapper --output_dir /home/m128030022/prbbiotics_cp/probiotics_new/databases/probiotics_DB/probiotics_db/GCA_000973605.1/2.eggNOGmapper --output eggNOG_out --override --cpu 14 -m diamond --sensmode fast
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
PHALIAPI_00001	224308.BSU00010	0.0	877.0	COG0593@1|root,COG0593@2|Bacteria,1TPV7@1239|Firmicutes,4H9MW@91061|Bacilli,1ZBKI@1386|Bacillus	91061|Bacilli	L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids	dnaA	GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837	-	ko:K02313	ko02020,ko04112,map02020,map04112	-	-	-	ko00000,ko00001,ko03032,ko03036	-	-	-	Bac_DnaA,Bac_DnaA_C,DnaA_N
PHALIAPI_00002	224308.BSU00020	9.88e-263	721.0	COG0592@1|root,COG0592@2|Bacteria,1TQ7J@1239|Firmicutes,4H9TF@91061|Bacilli,1ZAVV@1386|Bacillus	91061|Bacilli	L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	dnaN	-	2.7.7.7	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_beta,DNA_pol3_beta_3
PHALIAPI_00003	224308.BSU00030	2.24e-45	146.0	COG2501@1|root,COG2501@2|Bacteria,1VEJ2@1239|Firmicutes,4HNMC@91061|Bacilli,1ZIXZ@1386|Bacillus	91061|Bacilli	S	S4 domain	yaaA	-	-	ko:K14761	-	-	-	-	ko00000,ko03009	-	-	-	S4_2
PHALIAPI_00004	224308.BSU00040	1.3e-263	722.0	COG1195@1|root,COG1195@2|Bacteria,1TP9U@1239|Firmicutes,4HA0W@91061|Bacilli,1ZC8V@1386|Bacillus	91061|Bacilli	L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP	recF	GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576	-	ko:K03629	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	SMC_N
PHALIAPI_00005	224308.BSU00050	1.25e-51	162.0	2E36Q@1|root,32Y6E@2|Bacteria,1VEZV@1239|Firmicutes,4HQTK@91061|Bacilli,1ZIZ5@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF370)	yaaB	-	-	-	-	-	-	-	-	-	-	-	DUF370
PHALIAPI_00006	224308.BSU00060	0.0	1258.0	COG0187@1|root,COG0187@2|Bacteria,1TQ0R@1239|Firmicutes,4H9Y6@91061|Bacilli,1ZBFI@1386|Bacillus	91061|Bacilli	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrB	GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360	5.99.1.3	ko:K02470	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
PHALIAPI_00007	224308.BSU00070	0.0	1439.0	COG0188@1|root,COG0188@2|Bacteria,1TP2Z@1239|Firmicutes,4HAHY@91061|Bacilli,1ZB8F@1386|Bacillus	91061|Bacilli	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
PHALIAPI_00008	1051501.AYTL01000008_gene1340	1.13e-53	168.0	2DMNG@1|root,32SP1@2|Bacteria,1VAXC@1239|Firmicutes,4HM1Q@91061|Bacilli,1ZI92@1386|Bacillus	91061|Bacilli	S	COG NOG14552 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00011	224308.BSU00080	2.05e-230	634.0	28JUG@1|root,2Z9JI@2|Bacteria,1UYYT@1239|Firmicutes,4HC3E@91061|Bacilli,1ZBYK@1386|Bacillus	91061|Bacilli	S	YaaC-like Protein	yaaC	-	-	-	-	-	-	-	-	-	-	-	YaaC
PHALIAPI_00012	224308.BSU00090	0.0	946.0	COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,1TNZ1@1239|Firmicutes,4H9V3@91061|Bacilli,1ZC91@1386|Bacillus	91061|Bacilli	F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth	guaB	GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH
PHALIAPI_00013	224308.BSU00100	3.75e-316	861.0	COG1686@1|root,COG1686@2|Bacteria,1TQN0@1239|Firmicutes,4HBD4@91061|Bacilli,1ZAS6@1386|Bacillus	91061|Bacilli	M	Belongs to the peptidase S11 family	dacA	GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004185,GO:0005575,GO:0005618,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0009002,GO:0016787,GO:0017171,GO:0019538,GO:0030312,GO:0043170,GO:0044238,GO:0044464,GO:0070008,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564	3.4.16.4	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	PBP5_C,Peptidase_S11
PHALIAPI_00014	224308.BSU00110	3.7e-202	560.0	COG0214@1|root,COG0214@2|Bacteria,1TPSZ@1239|Firmicutes,4H9RA@91061|Bacilli,1ZB36@1386|Bacillus	91061|Bacilli	H	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively	pdxS	GO:0003674,GO:0005488,GO:0005515,GO:0042802	4.3.3.6	ko:K06215	ko00750,map00750	-	R07456	RC00010,RC01783,RC03043	ko00000,ko00001,ko01000	-	-	-	SOR_SNZ
PHALIAPI_00015	224308.BSU00120	1.93e-137	389.0	COG0311@1|root,COG0311@2|Bacteria,1V3I6@1239|Firmicutes,4HFSZ@91061|Bacilli,1ZD5C@1386|Bacillus	91061|Bacilli	H	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS	pdxT	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600	4.3.3.6	ko:K08681	ko00750,map00750	-	R07456	RC00010,RC01783,RC03043	ko00000,ko00001,ko01000	-	-	-	SNO
PHALIAPI_00016	224308.BSU00130	9.79e-296	808.0	COG0172@1|root,COG0172@2|Bacteria,1TP4W@1239|Firmicutes,4H9Y4@91061|Bacilli,1ZCBQ@1386|Bacillus	91061|Bacilli	J	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)	serS	-	6.1.1.11	ko:K01875	ko00970,map00970	M00359,M00360	R03662,R08218	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Seryl_tRNA_N,tRNA-synt_2b
PHALIAPI_00018	224308.BSU00140	2.15e-158	443.0	COG1428@1|root,COG1428@2|Bacteria,1TPJ1@1239|Firmicutes,4HA9N@91061|Bacilli,1ZBFB@1386|Bacillus	91061|Bacilli	F	Deoxycytidine kinase	dck	-	2.7.1.74,2.7.1.76	ko:K15519	ko00230,ko00240,ko01100,map00230,map00240,map01100	-	R00185,R01666,R02089	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	dNK
PHALIAPI_00019	224308.BSU00150	5.73e-149	419.0	COG1428@1|root,COG1428@2|Bacteria,1TQKS@1239|Firmicutes,4HBWC@91061|Bacilli,1ZCAQ@1386|Bacillus	91061|Bacilli	F	Deoxyguanosine kinase	dgk	-	2.7.1.113	ko:K15518	ko00230,map00230	-	R01967	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	dNK
PHALIAPI_00020	224308.BSU00160	4.53e-270	743.0	COG1388@1|root,COG3858@1|root,COG1388@2|Bacteria,COG3858@2|Bacteria,1TQK2@1239|Firmicutes,4HBJC@91061|Bacilli,1ZBQC@1386|Bacillus	91061|Bacilli	M	Glycoside Hydrolase Family	yaaH	-	-	ko:K06306	-	-	-	-	ko00000	-	-	-	Glyco_hydro_18,LysM
PHALIAPI_00021	224308.BSU00170	5.64e-125	356.0	COG1335@1|root,COG1335@2|Bacteria,1V5Y9@1239|Firmicutes,4HHKW@91061|Bacilli,1ZQ73@1386|Bacillus	91061|Bacilli	Q	COG1335 Amidases related to nicotinamidase	yaaI	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575	-	-	-	-	-	-	-	-	-	-	Isochorismatase
PHALIAPI_00022	224308.BSU00180	3e-108	312.0	COG0590@1|root,COG0590@2|Bacteria,1V3HZ@1239|Firmicutes,4HH7S@91061|Bacilli,1ZFRP@1386|Bacillus	91061|Bacilli	FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)	tadA	GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	3.5.4.33	ko:K11991	-	-	R10223	RC00477	ko00000,ko01000,ko03016	-	-	-	MafB19-deam
PHALIAPI_00023	224308.BSU00190	0.0	1095.0	COG2812@1|root,COG2812@2|Bacteria,1TPS9@1239|Firmicutes,4HAUE@91061|Bacilli,1ZB2M@1386|Bacillus	91061|Bacilli	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	dnaX	GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576	2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNA_pol3_gamma3
PHALIAPI_00024	224308.BSU00200	8.75e-55	172.0	COG0718@1|root,COG0718@2|Bacteria,1VA1S@1239|Firmicutes,4HKH3@91061|Bacilli,1ZGZI@1386|Bacillus	91061|Bacilli	S	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection	yaaK	-	-	ko:K09747	-	-	-	-	ko00000	-	-	-	YbaB_DNA_bd
PHALIAPI_00025	224308.BSU00210	8.53e-142	400.0	COG0353@1|root,COG0353@2|Bacteria,1TR87@1239|Firmicutes,4HAZR@91061|Bacilli,1ZBDK@1386|Bacillus	91061|Bacilli	L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO	recR	-	-	ko:K06187	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecR,Toprim_4
PHALIAPI_00026	224308.BSU00220	1.55e-42	139.0	2EHEM@1|root,33B6J@2|Bacteria,1VM3Z@1239|Firmicutes,4HR3I@91061|Bacilli,1ZIUR@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2508)	yaaL	-	-	-	-	-	-	-	-	-	-	-	DUF2508
PHALIAPI_00027	224308.BSU00230	3.07e-48	154.0	2E9CH@1|root,333K6@2|Bacteria,1VG2H@1239|Firmicutes,4HNZC@91061|Bacilli,1ZIUF@1386|Bacillus	91061|Bacilli	S	Sigma-K factor-processing regulatory protein BofA	bofA	-	-	ko:K06317	-	-	-	-	ko00000	-	-	-	BofA
PHALIAPI_00028	1051501.AYTL01000008_gene1340	1.13e-53	168.0	2DMNG@1|root,32SP1@2|Bacteria,1VAXC@1239|Firmicutes,4HM1Q@91061|Bacilli,1ZI92@1386|Bacillus	91061|Bacilli	S	COG NOG14552 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00031	224308.BSU00240	1.82e-41	135.0	2EIS2@1|root,33CHE@2|Bacteria,1VM34@1239|Firmicutes,4HR6Z@91061|Bacilli,1ZK09@1386|Bacillus	91061|Bacilli	S	Inhibitor of sigma-G Gin	csfB	-	-	-	-	-	-	-	-	-	-	-	Gin
PHALIAPI_00032	224308.BSU00250	1.05e-129	370.0	COG4915@1|root,COG4915@2|Bacteria,1V5B1@1239|Firmicutes,4HKAX@91061|Bacilli,1ZG4A@1386|Bacillus	91061|Bacilli	S	5-bromo-4-chloroindolyl phosphate hydrolysis protein	xpaC	-	-	-	-	-	-	-	-	-	-	-	Halogen_Hydrol
PHALIAPI_00033	224308.BSU00260	4.15e-259	712.0	COG3853@1|root,COG3853@2|Bacteria,1TQVX@1239|Firmicutes,4H9Z6@91061|Bacilli,1ZATR@1386|Bacillus	91061|Bacilli	P	Belongs to the TelA family	yaaN	-	-	-	-	-	-	-	-	-	-	-	TelA
PHALIAPI_00034	224308.BSU00270	0.0	939.0	COG1982@1|root,COG1982@2|Bacteria,1TNZ9@1239|Firmicutes,4HBGC@91061|Bacilli,1ZBKS@1386|Bacillus	91061|Bacilli	E	Orn Lys Arg decarboxylase	yaaO	-	-	-	-	-	-	-	-	-	-	-	OKR_DC_1,OKR_DC_1_C
PHALIAPI_00035	224308.BSU00280	2.82e-147	415.0	COG0125@1|root,COG0125@2|Bacteria,1V1HE@1239|Firmicutes,4HGWR@91061|Bacilli,1ZBSZ@1386|Bacillus	91061|Bacilli	F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	tmk	GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.4.9	ko:K00943	ko00240,ko01100,map00240,map01100	M00053	R02094,R02098	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS02535	Thymidylate_kin
PHALIAPI_00036	224308.BSU00290	1.02e-72	218.0	COG3870@1|root,COG3870@2|Bacteria,1V6NI@1239|Firmicutes,4HIHA@91061|Bacilli,1ZHEA@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yaaQ	-	-	-	-	-	-	-	-	-	-	-	CdAMP_rec
PHALIAPI_00037	224308.BSU00300	2.55e-95	278.0	COG1728@1|root,COG1728@2|Bacteria,1VF6M@1239|Firmicutes,4HP8D@91061|Bacilli,1ZFYU@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yaaR	-	-	ko:K09770	-	-	-	-	ko00000	-	-	-	DUF327
PHALIAPI_00038	224308.BSU00310	1.34e-233	643.0	COG0470@1|root,COG0470@2|Bacteria,1TRVS@1239|Firmicutes,4HA3T@91061|Bacilli,1ZBDA@1386|Bacillus	91061|Bacilli	L	DNA polymerase III	holB	GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576	2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNApol3-delta_C
PHALIAPI_00039	224308.BSU00320	6.33e-189	525.0	COG1774@1|root,COG1774@2|Bacteria,1TP1V@1239|Firmicutes,4H9M9@91061|Bacilli,1ZBCK@1386|Bacillus	91061|Bacilli	S	stage 0 sporulation protein	yaaT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	-	-	-	-	-	-	-	-	-	PSP1
PHALIAPI_00040	224308.BSU00330	1.53e-56	178.0	COG4467@1|root,COG4467@2|Bacteria,1VA1F@1239|Firmicutes,4HKND@91061|Bacilli,1ZGZH@1386|Bacillus	91061|Bacilli	L	Involved in initiation control of chromosome replication	yabA	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	-	-	-	-	-	-	-	-	-	YabB
PHALIAPI_00041	224308.BSU00340	2.81e-178	496.0	COG4123@1|root,COG4123@2|Bacteria,1TQ25@1239|Firmicutes,4HA8W@91061|Bacilli,1ZCBX@1386|Bacillus	91061|Bacilli	S	Conserved hypothetical protein 95	yabB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464	2.1.1.223	ko:K07461,ko:K15460	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	GIY-YIG,MTS
PHALIAPI_00042	224308.BSU00350	1.2e-64	197.0	COG2827@1|root,COG2827@2|Bacteria,1VEZF@1239|Firmicutes,4HNHJ@91061|Bacilli,1ZIXI@1386|Bacillus	91061|Bacilli	L	endonuclease containing a URI domain	yazA	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
PHALIAPI_00043	224308.BSU00360	5.96e-207	572.0	COG0313@1|root,COG0313@2|Bacteria,1TP6U@1239|Firmicutes,4HAH8@91061|Bacilli,1ZBN1@1386|Bacillus	91061|Bacilli	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	rsmI	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
PHALIAPI_00044	1051501.AYTL01000009_gene176	1.51e-58	181.0	COG2002@1|root,COG2002@2|Bacteria,1VA3H@1239|Firmicutes,4HKCH@91061|Bacilli,1ZH0F@1386|Bacillus	91061|Bacilli	K	COG2002 Regulators of stationary sporulation gene expression	abrB	GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0042802,GO:0043937,GO:0050789,GO:0050793,GO:0065007	-	ko:K06284	-	-	-	-	ko00000,ko03000	-	-	-	MazE_antitoxin
PHALIAPI_00045	224308.BSU00380	0.0	1325.0	COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,1TPA1@1239|Firmicutes,4H9VC@91061|Bacilli,1ZASP@1386|Bacillus	91061|Bacilli	J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation	metG	GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1g,tRNA_bind
PHALIAPI_00046	224308.BSU00390	5.9e-184	511.0	COG0084@1|root,COG0084@2|Bacteria,1TNY1@1239|Firmicutes,4HA74@91061|Bacilli,1ZB78@1386|Bacillus	91061|Bacilli	L	hydrolase, TatD	tatD	GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575	-	ko:K03424	-	-	-	-	ko00000,ko01000	-	-	-	TatD_DNase
PHALIAPI_00047	224308.BSU00400	2.48e-279	768.0	COG3583@1|root,COG3584@1|root,COG3583@2|Bacteria,COG3584@2|Bacteria,1TTIK@1239|Firmicutes,4HC79@91061|Bacilli,1ZC0Q@1386|Bacillus	91061|Bacilli	T	protein conserved in bacteria	yabE	-	-	-	-	-	-	-	-	-	-	-	3D,DUF348,G5
PHALIAPI_00048	224308.BSU00410	1.43e-125	358.0	COG1658@1|root,COG1658@2|Bacteria,1V3K3@1239|Firmicutes,4HH5Y@91061|Bacilli,1ZFNN@1386|Bacillus	91061|Bacilli	J	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step	rnmV	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043822,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360	3.1.26.8	ko:K05985	-	-	-	-	ko00000,ko01000	-	-	-	DUF4093,Toprim,Toprim_4
PHALIAPI_00049	224308.BSU00420	5.04e-199	552.0	COG0030@1|root,COG0030@2|Bacteria,1TP9W@1239|Firmicutes,4HA4R@91061|Bacilli,1ZBZX@1386|Bacillus	91061|Bacilli	J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits	ksgA	GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.182	ko:K02528	-	-	R10716	RC00003,RC03257	ko00000,ko01000,ko03009	-	-	-	RrnaAD
PHALIAPI_00050	224308.BSU00430	1.84e-197	548.0	28HCB@1|root,2Z7P7@2|Bacteria,1TNZK@1239|Firmicutes,4HBET@91061|Bacilli,1ZCTC@1386|Bacillus	91061|Bacilli	S	peptidase	yabG	GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0031160,GO:0043591,GO:0043593,GO:0044426,GO:0044462,GO:0044464,GO:0071944	-	ko:K06436	-	-	-	-	ko00000	-	-	-	Peptidase_U57
PHALIAPI_00051	224308.BSU00440	5.32e-53	166.0	COG4466@1|root,COG4466@2|Bacteria,1VEQM@1239|Firmicutes,4HKF8@91061|Bacilli,1ZI19@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	veg	-	-	-	-	-	-	-	-	-	-	-	VEG
PHALIAPI_00052	224308.BSU00460	2.34e-207	573.0	COG1947@1|root,COG1947@2|Bacteria,1TPXV@1239|Firmicutes,4HAV8@91061|Bacilli,1ZAYT@1386|Bacillus	91061|Bacilli	I	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol	ispE	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515	2.7.1.148	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096,M00582	R05634	RC00002,RC01439	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.29	-	iYO844.BSU00460	GHMP_kinases_C,GHMP_kinases_N
PHALIAPI_00053	224308.BSU00470	4.66e-196	544.0	COG0503@1|root,COG0503@2|Bacteria,1TPN9@1239|Firmicutes,4HB8I@91061|Bacilli,1ZAW9@1386|Bacillus	91061|Bacilli	F	pur operon repressor	purR	-	-	ko:K09685	-	-	-	-	ko00000,ko03000	-	-	-	Pribosyltran,PuR_N
PHALIAPI_00054	1051501.AYTL01000009_gene187	3.45e-83	246.0	COG0251@1|root,COG0251@2|Bacteria,1V6HG@1239|Firmicutes,4HKEF@91061|Bacilli,1ZG9Q@1386|Bacillus	91061|Bacilli	J	translation initiation inhibitor, yjgF family	yabJ	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019239,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046360,GO:0046361,GO:0046394,GO:0046459,GO:0051790,GO:0071704,GO:0072330,GO:1901576	3.5.99.10	ko:K09022	-	-	R11098,R11099	RC03275,RC03354	ko00000,ko01000	-	-	-	Ribonuc_L-PSP
PHALIAPI_00055	720555.BATR1942_18855	2.45e-63	193.0	COG2088@1|root,COG2088@2|Bacteria,1V9ZG@1239|Firmicutes,4HIPT@91061|Bacilli,1ZGXK@1386|Bacillus	91061|Bacilli	D	Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation	spoVG	GO:0000003,GO:0008150,GO:0019954,GO:0030436,GO:0032502,GO:0043934	-	ko:K06412	-	-	-	-	ko00000	-	-	-	SpoVG
PHALIAPI_00056	224308.BSU00500	2.58e-309	845.0	COG1207@1|root,COG1207@2|Bacteria,1TP88@1239|Firmicutes,4H9V5@91061|Bacilli,1ZAVH@1386|Bacillus	91061|Bacilli	M	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain	glmU	GO:0000270,GO:0000271,GO:0003674,GO:0003824,GO:0003977,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0030203,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509	2.3.1.157,2.7.7.23	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	M00362	R00416,R05332	RC00002,RC00004,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,NTP_transf_3,NTP_transferase
PHALIAPI_00057	224308.BSU00510	1.22e-223	617.0	COG0462@1|root,COG0462@2|Bacteria,1TQ6Q@1239|Firmicutes,4HB61@91061|Bacilli,1ZD4C@1386|Bacillus	91061|Bacilli	F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)	prs	GO:0003674,GO:0003824,GO:0004749,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyl_synth,Pribosyltran_N
PHALIAPI_00058	224308.BSU00520	1.45e-136	387.0	COG1825@1|root,COG1825@2|Bacteria,1VA38@1239|Firmicutes,4HIMM@91061|Bacilli,1ZDPJ@1386|Bacillus	91061|Bacilli	J	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	ctc	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02897	ko03010,map03010	M00178	-	-	ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L25p,Ribosomal_TL5_C
PHALIAPI_00059	224308.BSU00530	2.38e-134	380.0	COG0193@1|root,COG0193@2|Bacteria,1V3NB@1239|Firmicutes,4HH2Z@91061|Bacilli,1ZC7I@1386|Bacillus	91061|Bacilli	J	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis	pth	GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101	3.1.1.29	ko:K01056	-	-	-	-	ko00000,ko01000,ko03012	-	-	-	Pept_tRNA_hydro
PHALIAPI_00060	224308.BSU00540	1.06e-52	165.0	2EJ4H@1|root,33CVR@2|Bacteria,1VMIU@1239|Firmicutes,4HP24@91061|Bacilli,1ZJ5B@1386|Bacillus	91061|Bacilli	S	Peptide ABC transporter permease	yabK	-	-	-	-	-	-	-	-	-	-	-	DUF2757
PHALIAPI_00061	224308.BSU00550	0.0	2254.0	COG1197@1|root,COG1197@2|Bacteria,1TPF1@1239|Firmicutes,4H9NB@91061|Bacilli,1ZBAK@1386|Bacillus	91061|Bacilli	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site	mfd	-	-	ko:K03723	ko03420,map03420	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF
PHALIAPI_00062	224308.BSU00560	5.88e-121	345.0	COG2002@1|root,COG2002@2|Bacteria,1V02A@1239|Firmicutes,4HDIW@91061|Bacilli,1ZAXU@1386|Bacillus	91061|Bacilli	K	stage V sporulation protein	spoVT	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K04769	-	-	-	-	ko00000,ko03000	-	-	-	MazE_antitoxin,SpoVT_C
PHALIAPI_00063	224308.BSU00570	0.0	979.0	COG2244@1|root,COG2244@2|Bacteria,1TNYX@1239|Firmicutes,4HACG@91061|Bacilli,1ZBBF@1386|Bacillus	91061|Bacilli	S	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid	yabM	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03328	-	-	-	-	ko00000	2.A.66.2	-	-	Polysacc_synt,Polysacc_synt_C
PHALIAPI_00064	224308.BSU00580	0.0	882.0	COG1694@1|root,COG3956@2|Bacteria,1TPK1@1239|Firmicutes,4HA0A@91061|Bacilli,1ZAYB@1386|Bacillus	91061|Bacilli	S	COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like	yabN	GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658	3.6.1.66	ko:K02428,ko:K02499	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000,ko03036	-	-	-	MazG,TP_methylase
PHALIAPI_00065	224308.BSU00590	1.72e-49	157.0	COG1188@1|root,COG1188@2|Bacteria,1VEI5@1239|Firmicutes,4HKJJ@91061|Bacilli,1ZHXN@1386|Bacillus	91061|Bacilli	J	COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	yabO	-	-	-	-	-	-	-	-	-	-	-	S4
PHALIAPI_00066	224308.BSU00600	1.91e-66	201.0	2E3ZZ@1|root,32YWW@2|Bacteria,1VEIW@1239|Firmicutes,4HPDE@91061|Bacilli,1ZGYU@1386|Bacillus	91061|Bacilli	S	Sporulation protein YabP	yabP	GO:0005575,GO:0005623,GO:0042601,GO:0042763,GO:0044464	-	-	-	-	-	-	-	-	-	-	YabP
PHALIAPI_00067	224308.BSU00610	2.03e-135	385.0	2BYDV@1|root,32RAH@2|Bacteria,1V91M@1239|Firmicutes,4HIIQ@91061|Bacilli,1ZH7H@1386|Bacillus	91061|Bacilli	S	spore cortex biosynthesis protein	yabQ	GO:0005575,GO:0005623,GO:0042601,GO:0042763,GO:0044464	-	-	-	-	-	-	-	-	-	-	Spore_YabQ
PHALIAPI_00068	224308.BSU00620	4.18e-75	225.0	COG2919@1|root,COG2919@2|Bacteria,1VKC5@1239|Firmicutes,4HR53@91061|Bacilli,1ZIBZ@1386|Bacillus	91061|Bacilli	D	Septum formation initiator	divIC	-	-	ko:K13052	-	-	-	-	ko00000,ko03036	-	-	-	DivIC
PHALIAPI_00069	1051501.AYTL01000009_gene201	2.49e-82	244.0	COG1098@1|root,COG1098@2|Bacteria,1V6FE@1239|Firmicutes,4HIKM@91061|Bacilli,1ZG7S@1386|Bacillus	91061|Bacilli	J	RNA binding protein (contains ribosomal protein S1 domain)	yabR	-	-	ko:K07571	-	-	-	-	ko00000	-	-	-	S1
PHALIAPI_00072	224308.BSU00640	0.0	1548.0	COG2208@1|root,COG2208@2|Bacteria,1TQ92@1239|Firmicutes,4HB0X@91061|Bacilli,1ZAYZ@1386|Bacillus	91061|Bacilli	KT	stage II sporulation protein E	spoIIE	GO:0005575,GO:0005623,GO:0042601,GO:0042763,GO:0044464	3.1.3.16	ko:K06382	-	-	-	-	ko00000,ko01000	-	-	-	SpoIIE
PHALIAPI_00073	224308.BSU00650	5.61e-168	470.0	COG2304@1|root,COG2304@2|Bacteria,1U1SJ@1239|Firmicutes,4HD70@91061|Bacilli,1ZC1N@1386|Bacillus	91061|Bacilli	S	protein containing a von Willebrand factor type A (vWA) domain	yabS	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VWA,VWA_2
PHALIAPI_00074	224308.BSU00660	5.93e-237	652.0	COG0515@1|root,COG0515@2|Bacteria,1TSNS@1239|Firmicutes,4HBDI@91061|Bacilli,1ZBVA@1386|Bacillus	91061|Bacilli	KLT	serine threonine protein kinase	yabT	-	2.7.11.1	ko:K08884	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	Pkinase
PHALIAPI_00075	224308.BSU00670	0.0	937.0	COG0037@1|root,COG0037@2|Bacteria,1TPXP@1239|Firmicutes,4H9ZM@91061|Bacilli,1ZBFQ@1386|Bacillus	91061|Bacilli	D	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine	tilS	-	2.4.2.8,6.3.4.19	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	-	R01132,R01229,R02142,R09597	RC00063,RC00122,RC02633,RC02634	ko00000,ko00001,ko01000,ko03016	-	-	-	ATP_bind_3,TilS,TilS_C
PHALIAPI_00076	224308.BSU00680	4.82e-121	346.0	COG0634@1|root,COG0634@2|Bacteria,1V1C9@1239|Firmicutes,4HFZ2@91061|Bacilli,1ZB7B@1386|Bacillus	91061|Bacilli	F	Belongs to the purine pyrimidine phosphoribosyltransferase family	hpt	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.4.2.8,6.3.4.19	ko:K00760,ko:K15780	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	-	R00190,R01132,R01229,R02142,R08237,R08238,R08245	RC00063,RC00122	ko00000,ko00001,ko01000,ko03016	-	-	-	Pribosyltran
PHALIAPI_00077	224308.BSU00690	0.0	1233.0	COG0465@1|root,COG0465@2|Bacteria,1TPTV@1239|Firmicutes,4HAJB@91061|Bacilli,1ZBEU@1386|Bacillus	91061|Bacilli	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0030428,GO:0032502,GO:0042623,GO:0043170,GO:0043934,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
PHALIAPI_00078	224308.BSU00700	6.92e-189	524.0	COG1521@1|root,COG1521@2|Bacteria,1TR0X@1239|Firmicutes,4H9QA@91061|Bacilli,1ZBQ0@1386|Bacillus	91061|Bacilli	F	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis	coaX	-	2.7.1.33	ko:K03525	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Pan_kinase
PHALIAPI_00079	224308.BSU00710	3.88e-207	573.0	COG1281@1|root,COG1281@2|Bacteria,1TRCH@1239|Firmicutes,4HAFR@91061|Bacilli,1ZBFC@1386|Bacillus	91061|Bacilli	O	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress	hslO	-	-	ko:K04083	-	-	-	-	ko00000,ko03110	-	-	-	HSP33
PHALIAPI_00080	224308.BSU00720	9.49e-196	544.0	COG0760@1|root,COG0760@2|Bacteria,1UZZM@1239|Firmicutes,4HE14@91061|Bacilli,1ZBFZ@1386|Bacillus	91061|Bacilli	O	peptidyl-prolyl isomerase	yacD	-	5.2.1.8	ko:K07533	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_2,Rotamase_3,SurA_N_3
PHALIAPI_00081	224308.BSU00730	1.54e-217	600.0	COG0031@1|root,COG0031@2|Bacteria,1TP30@1239|Firmicutes,4HAMU@91061|Bacilli,1ZBC7@1386|Bacillus	91061|Bacilli	E	Belongs to the cysteine synthase cystathionine beta- synthase family	cysK	GO:0000096,GO:0000097,GO:0000098,GO:0003674,GO:0003824,GO:0004122,GO:0004124,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009087,GO:0009987,GO:0016043,GO:0016053,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016835,GO:0016836,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0022607,GO:0030170,GO:0032991,GO:0032993,GO:0036094,GO:0042127,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043388,GO:0043436,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046395,GO:0046983,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0051098,GO:0051099,GO:0051101,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051291,GO:0065003,GO:0065007,GO:0065009,GO:0070279,GO:0071704,GO:0071840,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1904796,GO:1904798,GO:2000677,GO:2000679	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
PHALIAPI_00082	224308.BSU00740	0.0	927.0	COG0147@1|root,COG0147@2|Bacteria,1TQAP@1239|Firmicutes,4HB31@91061|Bacilli,1ZARE@1386|Bacillus	91061|Bacilli	EH	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia	pabB	GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004049,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	2.6.1.85	ko:K01665	ko00790,map00790	-	R01716	RC00010,RC01418	ko00000,ko00001,ko01000	-	-	-	Anth_synt_I_N,Chorismate_bind
PHALIAPI_00083	224308.BSU00750	5.98e-137	387.0	COG0512@1|root,COG0512@2|Bacteria,1TT9R@1239|Firmicutes,4H9XP@91061|Bacilli,1ZBB7@1386|Bacillus	91061|Bacilli	EH	Anthranilate synthase	pabA	GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	2.6.1.85	ko:K01664	ko00790,map00790	-	R01716	RC00010,RC01418	ko00000,ko00001,ko01000	-	-	iYO844.BSU00750	GATase
PHALIAPI_00084	224308.BSU00760	1.87e-215	594.0	COG0115@1|root,COG0115@2|Bacteria,1TSIP@1239|Firmicutes,4HC7K@91061|Bacilli,1ZCRC@1386|Bacillus	91061|Bacilli	EH	4-amino-4-deoxychorismate lyase	pabC	-	4.1.3.38	ko:K02619	ko00790,map00790	-	R05553	RC01843,RC02148	ko00000,ko00001,ko01000	-	-	-	Aminotran_4
PHALIAPI_00085	224308.BSU00770	1.11e-203	563.0	COG0294@1|root,COG0294@2|Bacteria,1TPKT@1239|Firmicutes,4H9SY@91061|Bacilli,1ZAPZ@1386|Bacillus	91061|Bacilli	H	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives	folP	GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.15	ko:K00796	ko00790,ko01100,map00790,map01100	M00126,M00841	R03066,R03067	RC00121,RC00842	ko00000,ko00001,ko00002,ko01000	-	-	-	Pterin_bind
PHALIAPI_00086	224308.BSU00780	3.8e-80	238.0	COG1539@1|root,COG1539@2|Bacteria,1VA0I@1239|Firmicutes,4HKKK@91061|Bacilli,1ZGZ7@1386|Bacillus	91061|Bacilli	H	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin	folB	-	1.13.11.81,4.1.2.25,5.1.99.8	ko:K01633	ko00790,ko01100,map00790,map01100	M00126,M00840	R03504,R11037,R11073	RC00721,RC00943,RC01479,RC03333,RC03334	ko00000,ko00001,ko00002,ko01000	-	-	-	FolB
PHALIAPI_00087	224308.BSU00790	5.33e-114	327.0	COG0801@1|root,COG0801@2|Bacteria,1V6PR@1239|Firmicutes,4HIMG@91061|Bacilli,1ZGBC@1386|Bacillus	91061|Bacilli	H	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	folK	-	2.7.6.3	ko:K00950	ko00790,ko01100,map00790,map01100	M00126,M00841	R03503	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	HPPK
PHALIAPI_00088	224308.BSU00800	1.81e-41	136.0	COG1396@1|root,COG1396@2|Bacteria,1VIT6@1239|Firmicutes,4HP4J@91061|Bacilli,1ZJ4Q@1386|Bacillus	91061|Bacilli	K	transcriptional	yazB	-	-	-	-	-	-	-	-	-	-	-	HTH_3
PHALIAPI_00089	224308.BSU00810	1.59e-243	668.0	COG0042@1|root,COG0042@2|Bacteria,1TQ2R@1239|Firmicutes,4HA9K@91061|Bacilli,1ZC6T@1386|Bacillus	91061|Bacilli	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	dus	-	-	ko:K05540	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Dus
PHALIAPI_00090	224308.BSU00820	0.0	989.0	COG1190@1|root,COG1190@2|Bacteria,1TP2P@1239|Firmicutes,4H9X4@91061|Bacilli,1ZAVI@1386|Bacillus	91061|Bacilli	J	Belongs to the class-II aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04567	ko00970,map00970	M00359,M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon
PHALIAPI_00091	1051501.AYTL01000008_gene1340	1.13e-53	168.0	2DMNG@1|root,32SP1@2|Bacteria,1VAXC@1239|Firmicutes,4HM1Q@91061|Bacilli,1ZI92@1386|Bacillus	91061|Bacilli	S	COG NOG14552 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00092	224308.BSU00830	8.72e-100	290.0	COG4463@1|root,COG4463@2|Bacteria,1VAXT@1239|Firmicutes,4HIFT@91061|Bacilli,1ZFR6@1386|Bacillus	91061|Bacilli	K	Belongs to the CtsR family	ctsR	GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170	-	ko:K03708	-	-	-	-	ko00000,ko03000	-	-	-	CtsR
PHALIAPI_00093	1051501.AYTL01000005_gene306	2.36e-74	223.0	COG3880@1|root,COG3880@2|Bacteria,1V6YM@1239|Firmicutes,4HH4R@91061|Bacilli,1ZG9T@1386|Bacillus	91061|Bacilli	S	protein with conserved CXXC pairs	mcsA	GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170	-	ko:K19411	-	-	-	-	ko00000	-	-	-	UVR
PHALIAPI_00094	224308.BSU00850	7.74e-257	704.0	COG3869@1|root,COG3869@2|Bacteria,1TPBA@1239|Firmicutes,4HC6U@91061|Bacilli,1ZBJU@1386|Bacillus	91061|Bacilli	E	Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity	mcsB	GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170	2.7.14.1	ko:K19405	-	-	R11090	RC00002,RC00203	ko00000,ko01000	-	-	-	ATP-gua_Ptrans
PHALIAPI_00095	224308.BSU00860	0.0	1538.0	COG0542@1|root,COG0542@2|Bacteria,1TPMU@1239|Firmicutes,4HACY@91061|Bacilli,1ZB4C@1386|Bacillus	91061|Bacilli	O	Belongs to the ClpA ClpB family	clpC	GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170	-	ko:K03696	ko01100,map01100	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N,UVR
PHALIAPI_00096	224308.BSU00870	0.0	890.0	COG1066@1|root,COG1066@2|Bacteria,1TQ7Y@1239|Firmicutes,4H9YC@91061|Bacilli,1ZB8H@1386|Bacillus	91061|Bacilli	O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function	radA	-	-	ko:K04485	-	-	-	-	ko00000,ko03400	-	-	-	AAA_25,ATPase,ChlI
PHALIAPI_00097	224308.BSU00880	3.8e-251	690.0	COG1623@1|root,COG1623@2|Bacteria,1TQD8@1239|Firmicutes,4HAQP@91061|Bacilli,1ZBIY@1386|Bacillus	91061|Bacilli	L	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation	disA	-	2.7.7.85	ko:K07067	-	-	-	-	ko00000,ko01000	-	-	-	DisA-linker,DisA_N,HHH,HHH_2
PHALIAPI_00098	224308.BSU00890	2.57e-252	693.0	COG4956@1|root,COG4956@2|Bacteria,1TP0P@1239|Firmicutes,4H9NQ@91061|Bacilli,1ZB5A@1386|Bacillus	91061|Bacilli	S	COG4956 Integral membrane protein (PIN domain superfamily)	yacL	GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	TRAM
PHALIAPI_00099	224308.BSU00900	4.29e-161	451.0	COG1211@1|root,COG1211@2|Bacteria,1V3M7@1239|Firmicutes,4HH2N@91061|Bacilli,1ZCWR@1386|Bacillus	91061|Bacilli	I	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)	ispD	GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567	2.7.7.60	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05633	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	IspD
PHALIAPI_00100	224308.BSU00910	6.35e-113	323.0	COG0245@1|root,COG0245@2|Bacteria,1V3P0@1239|Firmicutes,4HG1X@91061|Bacilli,1ZB1U@1386|Bacillus	91061|Bacilli	I	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)	ispF	-	2.7.7.60,4.6.1.12	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05633,R05637	RC00002,RC01440	ko00000,ko00001,ko00002,ko01000	-	-	-	YgbB
PHALIAPI_00101	224308.BSU00920	0.0	967.0	COG0008@1|root,COG0008@2|Bacteria,1TPJC@1239|Firmicutes,4HAKH@91061|Bacilli,1ZAWK@1386|Bacillus	91061|Bacilli	J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)	gltX	GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0009986,GO:0030246,GO:0030247,GO:0044464,GO:2001065	6.1.1.24	ko:K09698	ko00970,ko01100,map00970,map01100	M00360	R03651,R05578	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	iSB619.SA_RS02860	tRNA-synt_1c
PHALIAPI_00102	224308.BSU00930	1.91e-152	428.0	COG1045@1|root,COG1045@2|Bacteria,1TR42@1239|Firmicutes,4HAKS@91061|Bacilli,1ZCNM@1386|Bacillus	91061|Bacilli	E	Serine acetyltransferase	cysE	GO:0000096,GO:0000097,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009087,GO:0009987,GO:0016053,GO:0016054,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607	2.3.1.30	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	M00021	R00586	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS02865,iYO844.BSU00930	Hexapep,SATase_N
PHALIAPI_00103	224308.BSU00940	0.0	939.0	COG0215@1|root,COG0215@2|Bacteria,1TP9D@1239|Firmicutes,4HA6D@91061|Bacilli,1ZB69@1386|Bacillus	91061|Bacilli	J	Belongs to the class-I aminoacyl-tRNA synthetase family	cysS	GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065	6.1.1.16	ko:K01883	ko00970,map00970	M00359,M00360	R03650	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_2,tRNA-synt_1e,tRNA-synt_1g
PHALIAPI_00104	224308.BSU00950	3.52e-96	280.0	COG1939@1|root,COG1939@2|Bacteria,1VA5V@1239|Firmicutes,4HIM3@91061|Bacilli,1ZH0Z@1386|Bacillus	91061|Bacilli	J	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)	mrnC	GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360	-	ko:K11145	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Ribonuclease_3
PHALIAPI_00105	224308.BSU00960	3.52e-173	483.0	COG0566@1|root,COG0566@2|Bacteria,1TP9G@1239|Firmicutes,4HBBI@91061|Bacilli,1ZAXC@1386|Bacillus	91061|Bacilli	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	trmH	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.185	ko:K03218	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SpoU_methylase,SpoU_sub_bind
PHALIAPI_00106	224308.BSU00970	3.31e-114	328.0	COG3688@1|root,COG3688@2|Bacteria,1V9XR@1239|Firmicutes,4HFW4@91061|Bacilli,1ZCMG@1386|Bacillus	91061|Bacilli	S	RNA-binding protein containing a PIN domain	yacP	-	-	ko:K06962	-	-	-	-	ko00000	-	-	-	NYN_YacP
PHALIAPI_00107	224308.BSU00980	3.27e-149	420.0	COG1595@1|root,COG1595@2|Bacteria,1TP55@1239|Firmicutes,4HAHR@91061|Bacilli,1ZBEV@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family	sigH	-	-	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	-	-	-	ko00000,ko00001,ko03000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
PHALIAPI_00108	224308.BSU01000	2.65e-32	112.0	COG0690@1|root,COG0690@2|Bacteria,1VK48@1239|Firmicutes,4HR1W@91061|Bacilli,1ZIY2@1386|Bacillus	91061|Bacilli	U	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation	secE	-	-	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecE
PHALIAPI_00109	224308.BSU01010	1.37e-124	355.0	COG0250@1|root,COG0250@2|Bacteria,1TR3P@1239|Firmicutes,4HAJA@91061|Bacilli,1ZBRH@1386|Bacillus	91061|Bacilli	K	Participates in transcription elongation, termination and antitermination	nusG	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141	-	ko:K02601	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	KOW,NusG
PHALIAPI_00110	224308.BSU01020	3.4e-93	272.0	COG0080@1|root,COG0080@2|Bacteria,1V1BS@1239|Firmicutes,4HFQ0@91061|Bacilli,1ZFIG@1386|Bacillus	91061|Bacilli	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors	rplK	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02867	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L11,Ribosomal_L11_N
PHALIAPI_00111	224308.BSU01030	1.82e-162	455.0	COG0081@1|root,COG0081@2|Bacteria,1TPTS@1239|Firmicutes,4HAK4@91061|Bacilli,1ZB14@1386|Bacillus	91061|Bacilli	J	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release	rplA	GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02863	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L1
PHALIAPI_00112	224308.BSU01040	4.03e-104	302.0	COG0244@1|root,COG0244@2|Bacteria,1V3JJ@1239|Firmicutes,4HH0N@91061|Bacilli,1ZBGK@1386|Bacillus	91061|Bacilli	J	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	rplJ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02864	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L10
PHALIAPI_00113	1051501.AYTL01000005_gene325	2.84e-64	198.0	COG0222@1|root,COG0222@2|Bacteria,1V6EI@1239|Firmicutes,4HIGQ@91061|Bacilli,1ZG84@1386|Bacillus	91061|Bacilli	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation	rplL	-	-	ko:K02935	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L12,Ribosomal_L12_N
PHALIAPI_00114	224308.BSU01060	5.1e-140	395.0	COG2813@1|root,COG2813@2|Bacteria,1V1BG@1239|Firmicutes,4HHCA@91061|Bacilli,1ZBPR@1386|Bacillus	91061|Bacilli	J	Methyltransferase	rsmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464	2.1.1.172	ko:K00564	-	-	R07234	RC00003	ko00000,ko01000,ko03009	-	-	-	MTS
PHALIAPI_00115	224308.BSU01070	0.0	2354.0	COG0085@1|root,COG0085@2|Bacteria,1TP96@1239|Firmicutes,4H9PK@91061|Bacilli,1ZBPC@1386|Bacillus	91061|Bacilli	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoB	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
PHALIAPI_00116	224308.BSU01080	0.0	2362.0	COG0086@1|root,COG0086@2|Bacteria,1TNYT@1239|Firmicutes,4HA24@91061|Bacilli,1ZDK0@1386|Bacillus	91061|Bacilli	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoC	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
PHALIAPI_00117	224308.BSU01090	1.99e-44	144.0	COG1358@1|root,COG1358@2|Bacteria,1VFD8@1239|Firmicutes,4HNXS@91061|Bacilli,1ZIU6@1386|Bacillus	91061|Bacilli	J	Belongs to the eukaryotic ribosomal protein eL8 family	rplGB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K07590	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L7Ae
PHALIAPI_00118	224308.BSU01100	6.67e-94	274.0	COG0048@1|root,COG0048@2|Bacteria,1V1FJ@1239|Firmicutes,4HFMZ@91061|Bacilli,1ZFM9@1386|Bacillus	91061|Bacilli	J	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit	rpsL	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02950	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosom_S12_S23
PHALIAPI_00119	1051501.AYTL01000005_gene331	4.85e-107	308.0	COG0049@1|root,COG0049@2|Bacteria,1V1GG@1239|Firmicutes,4H9PA@91061|Bacilli,1ZBVR@1386|Bacillus	91061|Bacilli	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA	rpsG	GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02992	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S7
PHALIAPI_00120	224308.BSU01120	0.0	1360.0	COG0480@1|root,COG0480@2|Bacteria,1TPF9@1239|Firmicutes,4HAB8@91061|Bacilli,1ZBS4@1386|Bacillus	91061|Bacilli	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome	fusA	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
PHALIAPI_00121	224308.BSU01130	2.01e-287	785.0	COG0050@1|root,COG0050@2|Bacteria,1TPKC@1239|Firmicutes,4HAEH@91061|Bacilli,1ZCZK@1386|Bacillus	91061|Bacilli	J	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis	tuf	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K02358	-	-	-	-	ko00000,ko03012,ko03029,ko04147	-	-	iSB619.SA_RS02960	GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3
PHALIAPI_00122	224308.BSU01140	1.9e-232	639.0	COG0596@1|root,COG0596@2|Bacteria,1UHTA@1239|Firmicutes,4IS90@91061|Bacilli,1ZS38@1386|Bacillus	91061|Bacilli	S	Alpha/beta hydrolase family	ybaC	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
PHALIAPI_00123	1051501.AYTL01000005_gene335	2.58e-65	199.0	COG0051@1|root,COG0051@2|Bacteria,1V6C9@1239|Firmicutes,4HIKH@91061|Bacilli,1ZGA6@1386|Bacillus	91061|Bacilli	J	Involved in the binding of tRNA to the ribosomes	rpsJ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02946	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S10
PHALIAPI_00124	224308.BSU01160	7.2e-144	406.0	COG0087@1|root,COG0087@2|Bacteria,1TPFT@1239|Firmicutes,4HAEN@91061|Bacilli,1ZCM8@1386|Bacillus	91061|Bacilli	J	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit	rplC	GO:0008150,GO:0009893,GO:0010468,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0044087,GO:0044089,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090070,GO:2000232,GO:2000234	-	ko:K02906	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L3
PHALIAPI_00125	224308.BSU01170	7.43e-136	385.0	COG0088@1|root,COG0088@2|Bacteria,1TPGW@1239|Firmicutes,4HB01@91061|Bacilli,1ZBG9@1386|Bacillus	91061|Bacilli	J	Forms part of the polypeptide exit tunnel	rplD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02926	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L4
PHALIAPI_00126	224308.BSU01180	3.27e-58	180.0	COG0089@1|root,COG0089@2|Bacteria,1VA4W@1239|Firmicutes,4HKCV@91061|Bacilli,1ZH09@1386|Bacillus	91061|Bacilli	J	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome	rplW	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02892	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L23
PHALIAPI_00127	224308.BSU01190	2.72e-200	554.0	COG0090@1|root,COG0090@2|Bacteria,1TP9X@1239|Firmicutes,4HAE8@91061|Bacilli,1ZCQP@1386|Bacillus	91061|Bacilli	J	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity	rplB	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02886	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L2,Ribosomal_L2_C
PHALIAPI_00128	1051501.AYTL01000005_gene340	2.83e-62	190.0	COG0185@1|root,COG0185@2|Bacteria,1V6CX@1239|Firmicutes,4HIG0@91061|Bacilli,1ZGXY@1386|Bacillus	91061|Bacilli	J	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA	rpsS	GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02965	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S19
PHALIAPI_00129	224308.BSU01210	9.23e-71	213.0	COG0091@1|root,COG0091@2|Bacteria,1V6PU@1239|Firmicutes,4HIK2@91061|Bacilli,1ZG6U@1386|Bacillus	91061|Bacilli	J	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	rplV	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02890	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L22
PHALIAPI_00130	720555.BATR1942_19220	1.69e-151	426.0	COG0092@1|root,COG0092@2|Bacteria,1TPCP@1239|Firmicutes,4HAUR@91061|Bacilli,1ZBA9@1386|Bacillus	91061|Bacilli	J	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation	rpsC	GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02982	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	KH_2,Ribosomal_S3_C
PHALIAPI_00131	1051501.AYTL01000005_gene343	1.96e-98	286.0	COG0197@1|root,COG0197@2|Bacteria,1V1AY@1239|Firmicutes,4HFPN@91061|Bacilli,1ZFMZ@1386|Bacillus	91061|Bacilli	J	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs	rplP	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904	-	ko:K02878	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L16
PHALIAPI_00132	1051501.AYTL01000005_gene344	1.88e-35	120.0	COG0255@1|root,COG0255@2|Bacteria,1VEME@1239|Firmicutes,4HNUP@91061|Bacilli,1ZI7W@1386|Bacillus	91061|Bacilli	J	Belongs to the universal ribosomal protein uL29 family	rpmC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02904	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L29
PHALIAPI_00133	224308.BSU01250	1.64e-52	165.0	COG0186@1|root,COG0186@2|Bacteria,1V9YC@1239|Firmicutes,4HKDN@91061|Bacilli,1ZH2Q@1386|Bacillus	91061|Bacilli	J	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA	rpsQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02961	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S17
PHALIAPI_00134	1051501.AYTL01000005_gene346	3.62e-79	235.0	COG0093@1|root,COG0093@2|Bacteria,1V3N0@1239|Firmicutes,4HGYR@91061|Bacilli,1ZG7H@1386|Bacillus	91061|Bacilli	J	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome	rplN	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904	-	ko:K02874	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L14
PHALIAPI_00135	1051501.AYTL01000005_gene347	1.43e-67	204.0	COG0198@1|root,COG0198@2|Bacteria,1V9ZQ@1239|Firmicutes,4HKH9@91061|Bacilli,1ZGZQ@1386|Bacillus	91061|Bacilli	J	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit	rplX	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02895	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	KOW,ribosomal_L24
PHALIAPI_00136	224308.BSU01280	7.72e-122	348.0	COG0094@1|root,COG0094@2|Bacteria,1TPE0@1239|Firmicutes,4HBAX@91061|Bacilli,1ZB6T@1386|Bacillus	91061|Bacilli	J	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits	rplE	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02931	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L5,Ribosomal_L5_C
PHALIAPI_00137	224308.BSU01290	1.43e-39	130.0	COG0199@1|root,COG0199@2|Bacteria,1VEF6@1239|Firmicutes,4HNKX@91061|Bacilli,1ZHVE@1386|Bacillus	91061|Bacilli	J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site	rpsN	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02954	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S14
PHALIAPI_00138	224308.BSU01300	3.11e-87	256.0	COG0096@1|root,COG0096@2|Bacteria,1V3KK@1239|Firmicutes,4HH32@91061|Bacilli,1ZFMC@1386|Bacillus	91061|Bacilli	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit	rpsH	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02994	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S8
PHALIAPI_00139	224308.BSU01310	4.47e-121	346.0	COG0097@1|root,COG0097@2|Bacteria,1V1FC@1239|Firmicutes,4HFQD@91061|Bacilli,1ZCR5@1386|Bacillus	91061|Bacilli	J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center	rplF	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02933	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L6
PHALIAPI_00140	224308.BSU01320	2.89e-75	225.0	COG0256@1|root,COG0256@2|Bacteria,1V6DM@1239|Firmicutes,4HIGF@91061|Bacilli,1ZG7C@1386|Bacillus	91061|Bacilli	J	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance	rplR	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904	-	ko:K02881	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L18p
PHALIAPI_00141	326423.RBAM_001580	9.16e-111	319.0	COG0098@1|root,COG0098@2|Bacteria,1V1B1@1239|Firmicutes,4HFN4@91061|Bacilli,1ZBWE@1386|Bacillus	91061|Bacilli	J	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body	rpsE	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02988	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S5,Ribosomal_S5_C
PHALIAPI_00142	1051501.AYTL01000005_gene354	1.59e-33	115.0	COG1841@1|root,COG1841@2|Bacteria,1VEG4@1239|Firmicutes,4HNHF@91061|Bacilli,1ZITD@1386|Bacillus	91061|Bacilli	J	Ribosomal protein L30	rpmD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02907	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L30
PHALIAPI_00143	1051501.AYTL01000005_gene355	7.32e-95	277.0	COG0200@1|root,COG0200@2|Bacteria,1V3KE@1239|Firmicutes,4HFPW@91061|Bacilli,1ZFMY@1386|Bacillus	91061|Bacilli	J	binds to the 23S rRNA	rplO	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02876	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27A
PHALIAPI_00144	224308.BSU01360	5.7e-298	814.0	COG0201@1|root,COG0201@2|Bacteria,1TPHB@1239|Firmicutes,4HAWH@91061|Bacilli,1ZCEG@1386|Bacillus	91061|Bacilli	U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	secY	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5	-	-	SecY
PHALIAPI_00145	224308.BSU01370	2.51e-157	441.0	COG0563@1|root,COG0563@2|Bacteria,1TP27@1239|Firmicutes,4HA89@91061|Bacilli,1ZBYM@1386|Bacillus	91061|Bacilli	F	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism	adk	GO:0003674,GO:0003824,GO:0004017,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ADK,ADK_lid
PHALIAPI_00146	224308.BSU01380	3.29e-182	506.0	COG0024@1|root,COG0024@2|Bacteria,1TQC1@1239|Firmicutes,4H9S9@91061|Bacilli,1ZBQI@1386|Bacillus	91061|Bacilli	E	Methionine aminopeptidase	map	-	3.4.11.18	ko:K01265	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M24
PHALIAPI_00147	1051501.AYTL01000005_gene359	2.92e-46	148.0	COG0361@1|root,COG0361@2|Bacteria,1V9ZK@1239|Firmicutes,4HKF4@91061|Bacilli,1ZHWN@1386|Bacillus	91061|Bacilli	J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex	infA	GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065	-	ko:K02518	-	-	-	-	ko00000,ko03012	-	-	-	eIF-1a
PHALIAPI_00148	1178537.BA1_05527	2.45e-19	78.2	COG0257@1|root,COG0257@2|Bacteria,1VK4F@1239|Firmicutes,4HR2X@91061|Bacilli,1ZK67@1386|Bacillus	91061|Bacilli	J	Belongs to the bacterial ribosomal protein bL36 family	rpmJ	-	-	ko:K02919	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L36
PHALIAPI_00149	224308.BSU01410	1.09e-75	226.0	COG0099@1|root,COG0099@2|Bacteria,1V3JH@1239|Firmicutes,4HGX6@91061|Bacilli,1ZGAW@1386|Bacillus	91061|Bacilli	J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits	rpsM	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02952	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S13
PHALIAPI_00150	224308.BSU01420	3.24e-84	249.0	COG0100@1|root,COG0100@2|Bacteria,1V3IK@1239|Firmicutes,4HH2T@91061|Bacilli,1ZFIU@1386|Bacillus	91061|Bacilli	J	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome	rpsK	GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02948	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S11
PHALIAPI_00151	224308.BSU01430	7.01e-217	599.0	COG0202@1|root,COG0202@2|Bacteria,1TPR8@1239|Firmicutes,4H9R1@91061|Bacilli,1ZBHX@1386|Bacillus	91061|Bacilli	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoA	GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576	2.7.7.6	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L
PHALIAPI_00152	1051501.AYTL01000005_gene363	4.27e-77	230.0	COG0203@1|root,COG0203@2|Bacteria,1V6JQ@1239|Firmicutes,4HGX2@91061|Bacilli,1ZG80@1386|Bacillus	91061|Bacilli	J	Ribosomal protein L17	rplQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02879	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L17
PHALIAPI_00153	224308.BSU01450	3.05e-199	552.0	COG1122@1|root,COG1122@2|Bacteria,1TPH8@1239|Firmicutes,4H9R8@91061|Bacilli,1ZBD2@1386|Bacillus	91061|Bacilli	P	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates	ecfA1	-	-	ko:K16786	ko02010,map02010	M00582	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35	-	-	ABC_tran
PHALIAPI_00154	1051501.AYTL01000005_gene365	2.69e-197	548.0	COG1122@1|root,COG1122@2|Bacteria,1TPH8@1239|Firmicutes,4HA7T@91061|Bacilli,1ZBBK@1386|Bacillus	91061|Bacilli	P	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates	ecfA2	GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085	-	ko:K16787	ko02010,map02010	M00582	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35	-	-	ABC_tran
PHALIAPI_00155	224308.BSU01470	4.58e-177	494.0	COG0619@1|root,COG0619@2|Bacteria,1TQ0E@1239|Firmicutes,4H9VT@91061|Bacilli,1ZBNS@1386|Bacillus	91061|Bacilli	P	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates	ecfT	-	-	ko:K16785	ko02010,map02010	M00582	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35	-	-	CbiQ
PHALIAPI_00156	224308.BSU01480	1.76e-181	504.0	COG0101@1|root,COG0101@2|Bacteria,1TQUY@1239|Firmicutes,4HCFI@91061|Bacilli,1ZCC7@1386|Bacillus	91061|Bacilli	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	truA	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
PHALIAPI_00157	1051501.AYTL01000005_gene368	1.13e-102	296.0	COG0102@1|root,COG0102@2|Bacteria,1V3HX@1239|Firmicutes,4HG0I@91061|Bacilli,1ZFJA@1386|Bacillus	91061|Bacilli	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly	rplM	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02871	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L13
PHALIAPI_00158	224308.BSU01500	4.28e-84	248.0	COG0103@1|root,COG0103@2|Bacteria,1V3MQ@1239|Firmicutes,4HH3B@91061|Bacilli,1ZG6R@1386|Bacillus	91061|Bacilli	J	Belongs to the universal ribosomal protein uS9 family	rpsI	GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02996	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S9
PHALIAPI_00159	224308.BSU01510	5.05e-185	514.0	COG0500@1|root,COG2226@2|Bacteria,1TR3E@1239|Firmicutes,4HA5G@91061|Bacilli,1ZF9T@1386|Bacillus	91061|Bacilli	Q	Methyltransferase domain	ybaJ	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
PHALIAPI_00160	720555.BATR1942_19375	7.58e-93	272.0	2BVDP@1|root,32QTK@2|Bacteria,1V9E2@1239|Firmicutes,4HJ1S@91061|Bacilli,1ZFUF@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2521)	ybaK	-	-	-	-	-	-	-	-	-	-	-	DUF2521
PHALIAPI_00161	224308.BSU01530	1.29e-169	473.0	COG0860@1|root,COG0860@2|Bacteria,1TQ74@1239|Firmicutes,4HAV3@91061|Bacilli,1ZBJ8@1386|Bacillus	91061|Bacilli	M	n-acetylmuramoyl-L-alanine amidase	cwlD	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
PHALIAPI_00162	224308.BSU01540	8.64e-253	693.0	COG0489@1|root,COG0489@2|Bacteria,1TQ34@1239|Firmicutes,4HAW4@91061|Bacilli,1ZC2E@1386|Bacillus	91061|Bacilli	D	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP	mrp	GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141	-	ko:K03593	-	-	-	-	ko00000,ko03029,ko03036	-	-	-	FeS_assembly_P,ParA
PHALIAPI_00163	224308.BSU01550	6.03e-122	348.0	29HQ2@1|root,32TXD@2|Bacteria,1VAW4@1239|Firmicutes,4HMNZ@91061|Bacilli,1ZQMV@1386|Bacillus	91061|Bacilli	-	-	gerD	GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0031160,GO:0044464,GO:0071944	-	ko:K06294	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_00164	224308.BSU01560	5.95e-133	377.0	COG2194@1|root,COG2194@2|Bacteria,1UZ64@1239|Firmicutes,4HFDE@91061|Bacilli,1ZFN5@1386|Bacillus	91061|Bacilli	S	Involved in the activation of the KinB signaling pathway of sporulation	kbaA	GO:0008150,GO:0022603,GO:0042173,GO:0043937,GO:0043938,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0065007	-	ko:K06349	-	-	-	-	ko00000	-	-	-	KbaA
PHALIAPI_00165	224308.BSU01570	4.31e-181	504.0	COG0726@1|root,COG0726@2|Bacteria,1UZQS@1239|Firmicutes,4IPKY@91061|Bacilli,1ZRC8@1386|Bacillus	91061|Bacilli	G	Polysaccharide deacetylase	pdaB	GO:0005575,GO:0005623,GO:0016020,GO:0042763,GO:0044464	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
PHALIAPI_00166	1051501.AYTL01000008_gene1340	1.13e-53	168.0	2DMNG@1|root,32SP1@2|Bacteria,1VAXC@1239|Firmicutes,4HM1Q@91061|Bacilli,1ZI92@1386|Bacillus	91061|Bacilli	S	COG NOG14552 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00167	224308.BSU01580	0.0	871.0	COG0659@1|root,COG0659@2|Bacteria,1TPI4@1239|Firmicutes,4H9V4@91061|Bacilli,1ZCKC@1386|Bacillus	91061|Bacilli	P	COG0659 Sulfate permease and related transporters (MFS superfamily)	ybaR	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	STAS,Sulfate_transp
PHALIAPI_00168	224308.BSU01590	1.35e-202	563.0	COG0385@1|root,COG0385@2|Bacteria,1TP85@1239|Firmicutes,4HB6E@91061|Bacilli,1ZQNX@1386|Bacillus	91061|Bacilli	S	Na -dependent transporter	ybaS	-	-	-	-	-	-	-	-	-	-	-	SBF,SBF_like
PHALIAPI_00169	224308.BSU01600	2.91e-177	494.0	COG2819@1|root,COG2819@2|Bacteria,1VAX2@1239|Firmicutes,4HGZQ@91061|Bacilli,1ZFE7@1386|Bacillus	91061|Bacilli	S	Putative esterase	ybbA	-	-	ko:K07017	-	-	-	-	ko00000	-	-	-	Esterase
PHALIAPI_00170	224308.BSU01610	1.43e-227	628.0	COG0609@1|root,COG0609@2|Bacteria,1TPX6@1239|Firmicutes,4HD4U@91061|Bacilli,1ZQ8W@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	feuC	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
PHALIAPI_00171	224308.BSU01620	2.88e-226	625.0	COG0609@1|root,COG0609@2|Bacteria,1TP13@1239|Firmicutes,4HA75@91061|Bacilli,1ZC7Z@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	feuB	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071944	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
PHALIAPI_00172	224308.BSU01630	1.47e-215	596.0	COG0614@1|root,COG0614@2|Bacteria,1TQY2@1239|Firmicutes,4HB4K@91061|Bacilli,1ZEG1@1386|Bacillus	91061|Bacilli	P	Iron-uptake system-binding protein	feuA	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
PHALIAPI_00173	224308.BSU01640	0.0	1019.0	COG0614@1|root,COG2207@1|root,COG0614@2|Bacteria,COG2207@2|Bacteria,1UA6E@1239|Firmicutes,4HE6W@91061|Bacilli,1ZF3U@1386|Bacillus	91061|Bacilli	K	COG2207 AraC-type DNA-binding domain-containing proteins	ybbB	-	-	ko:K21701	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18,HTH_AraC,Peripla_BP_2
PHALIAPI_00174	224308.BSU01650	3.04e-298	813.0	COG3876@1|root,COG3876@2|Bacteria,1VRMG@1239|Firmicutes,4HA8F@91061|Bacilli,1ZBF3@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ybbC	-	-	-	-	-	-	-	-	-	-	-	DUF1343
PHALIAPI_00175	224308.BSU01660	0.0	1218.0	COG1472@1|root,COG1472@2|Bacteria,1TP63@1239|Firmicutes,4HBDB@91061|Bacilli,1ZCGR@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 3 family	ybbD	-	3.2.1.52	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	M00628	R00022,R05963,R07809,R07810,R10831	RC00049	ko00000,ko00001,ko00002,ko01000	-	-	-	Big_2,Glyco_hydro_3,Glyco_hydro_3_C,Gram_pos_anchor,SLH
PHALIAPI_00176	224308.BSU01670	0.0	875.0	COG1680@1|root,COG1680@2|Bacteria,1U828@1239|Firmicutes,4HA0Q@91061|Bacilli,1ZBJ0@1386|Bacillus	91061|Bacilli	V	Belongs to the UPF0214 family	ybbE	-	3.4.16.4	ko:K21469	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	Beta-lactamase
PHALIAPI_00177	224308.BSU01680	3.44e-300	822.0	COG1263@1|root,COG1264@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,1TP5X@1239|Firmicutes,4H9KS@91061|Bacilli,1ZE6P@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	ybbF	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563,GO:0090588	2.7.1.211	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	M00269	R00811	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.2.1,4.A.1.2.10,4.A.1.2.12,4.A.1.2.9	-	-	PTS_EIIA_1,PTS_EIIB,PTS_EIIC
PHALIAPI_00178	224308.BSU01690	5.43e-194	539.0	COG1737@1|root,COG1737@2|Bacteria,1TPIX@1239|Firmicutes,4HBJA@91061|Bacilli,1ZQ09@1386|Bacillus	91061|Bacilli	K	transcriptional	ybbH	GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_6,SIS
PHALIAPI_00179	224308.BSU01700	3.18e-208	577.0	COG2103@1|root,COG2103@2|Bacteria,1TPSF@1239|Firmicutes,4HBWP@91061|Bacilli,1ZCFF@1386|Bacillus	91061|Bacilli	G	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate	murQ	-	4.2.1.126	ko:K07106	ko00520,ko01100,map00520,map01100	-	R08555	RC00397,RC00746	ko00000,ko00001,ko01000	-	-	-	SIS,SIS_2
PHALIAPI_00180	224308.BSU01710	8.99e-114	326.0	COG1670@1|root,COG1670@2|Bacteria,1VB0J@1239|Firmicutes,4HMJ9@91061|Bacilli,1ZHYA@1386|Bacillus	91061|Bacilli	J	acetyltransferase	ybbJ	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_8
PHALIAPI_00181	224308.BSU01720	6.96e-100	290.0	COG1683@1|root,COG1683@2|Bacteria,1V700@1239|Firmicutes,4HJH0@91061|Bacilli,1ZGEW@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF523)	ybbK	-	-	-	-	-	-	-	-	-	-	-	DUF523
PHALIAPI_00187	224308.BSU01730	4.59e-127	362.0	COG1595@1|root,COG1595@2|Bacteria,1TS3M@1239|Firmicutes,4HC17@91061|Bacilli,1ZCZ4@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	sigW	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
PHALIAPI_00188	224308.BSU01740	3.19e-151	424.0	COG5662@1|root,COG5662@2|Bacteria,1V6C7@1239|Firmicutes,4HFTK@91061|Bacilli,1ZE1K@1386|Bacillus	91061|Bacilli	K	Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation	rsiW	GO:0005575,GO:0016020	-	-	-	-	-	-	-	-	-	-	Bactofilin,zf-HC2
PHALIAPI_00189	224308.BSU01750	5.43e-189	525.0	COG1624@1|root,COG1624@2|Bacteria,1TPRW@1239|Firmicutes,4H9XZ@91061|Bacilli,1ZBIU@1386|Bacillus	91061|Bacilli	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria	dacA	GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009975,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	2.7.7.85	ko:K18672	-	-	-	-	ko00000,ko01000	-	-	-	DisA_N
PHALIAPI_00190	224308.BSU01760	1.44e-290	800.0	COG4856@1|root,COG4856@2|Bacteria,1TSIV@1239|Firmicutes,4HD8Y@91061|Bacilli,1ZB2T@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ybbR	GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009	-	-	-	-	-	-	-	-	-	-	YbbR
PHALIAPI_00191	224308.BSU01770	0.0	870.0	COG1109@1|root,COG1109@2|Bacteria,1TP1X@1239|Firmicutes,4HB16@91061|Bacilli,1ZC74@1386|Bacillus	91061|Bacilli	G	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate	glmM	-	5.4.2.10	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	-	R02060	RC00408	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS11275	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
PHALIAPI_00192	224308.BSU01780	0.0	1160.0	COG0449@1|root,COG0449@2|Bacteria,1TPGU@1239|Firmicutes,4H9R4@91061|Bacilli,1ZBI5@1386|Bacillus	91061|Bacilli	M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	glmS	GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	-	R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002	-	-	iSB619.SA_RS11245,iYO844.BSU01780	GATase_6,SIS
PHALIAPI_00193	935836.JAEL01000009_gene3803	9.21e-126	361.0	COG0671@1|root,COG0671@2|Bacteria,1UZ1A@1239|Firmicutes,4HDCB@91061|Bacilli,1ZFNG@1386|Bacillus	91061|Bacilli	I	Bacitracin ABC transporter permease	bcrC	-	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
PHALIAPI_00194	224308.BSU01830	0.0	934.0	COG1009@1|root,COG1009@2|Bacteria,1TS72@1239|Firmicutes,4HCW7@91061|Bacilli,1ZCMA@1386|Bacillus	91061|Bacilli	CP	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit	ndhF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.6.5.3	ko:K05577	ko00190,ko01100,map00190,map01100	M00145	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	-	-	-	Proton_antipo_M,Proton_antipo_N
PHALIAPI_00195	224308.BSU01845	0.0	1741.0	COG3002@1|root,COG3002@2|Bacteria,1UWRU@1239|Firmicutes,4HAMS@91061|Bacilli,1ZCP6@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0753 family	ybcC	-	-	ko:K09822	-	-	-	-	ko00000	-	-	-	DUF2309
PHALIAPI_00196	224308.BSU01860	4.68e-121	345.0	COG0288@1|root,COG0288@2|Bacteria,1W0HW@1239|Firmicutes,4HYSF@91061|Bacilli,1ZFYB@1386|Bacillus	91061|Bacilli	P	carbonic anhydrase	ybcF	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00198	224308.BSU01870	1.6e-63	194.0	2BF6D@1|root,328YS@2|Bacteria,1UBA5@1239|Firmicutes,4IMNX@91061|Bacilli,1ZKI1@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00199	224308.BSU01880	1.03e-79	237.0	COG5609@1|root,COG5609@2|Bacteria,1V6YC@1239|Firmicutes,4HIMH@91061|Bacilli,1ZH3T@1386|Bacillus	91061|Bacilli	S	Uncharacterized conserved protein (DUF2294)	ybcI	-	-	-	-	-	-	-	-	-	-	-	DUF2294
PHALIAPI_00200	1051501.AYTL01000034_gene3188	9.45e-67	202.0	COG0640@1|root,COG0640@2|Bacteria,1V98U@1239|Firmicutes,4HIU9@91061|Bacilli,1ZHRJ@1386|Bacillus	91061|Bacilli	K	Helix-turn-helix domain	-	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_20
PHALIAPI_00201	224308.BSU01890	7.35e-255	702.0	COG0477@1|root,COG2814@2|Bacteria,1TRNU@1239|Firmicutes,4HCSX@91061|Bacilli,1ZCJJ@1386|Bacillus	91061|Bacilli	EGP	COG2814 Arabinose efflux permease	ybcL	-	-	ko:K08164	-	-	-	-	ko00000,ko02000	2.A.1.2	-	-	MFS_1,Sugar_tr
PHALIAPI_00202	1051501.AYTL01000034_gene3190	8.07e-59	182.0	2EGPH@1|root,33AFM@2|Bacteria,1VPIE@1239|Firmicutes,4IMBB@91061|Bacilli,1ZJQ4@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00203	224308.BSU01990	1.9e-231	637.0	COG0596@1|root,COG0596@2|Bacteria,1V202@1239|Firmicutes,4HJ0U@91061|Bacilli,1ZBQD@1386|Bacillus	91061|Bacilli	S	hydrolases or acyltransferases (alpha beta hydrolase superfamily)	-	GO:0003674,GO:0003824,GO:0016787	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
PHALIAPI_00204	224308.BSU02000	6.9e-158	442.0	COG0745@1|root,COG0745@2|Bacteria,1TRNP@1239|Firmicutes,4HBUV@91061|Bacilli,1ZCWC@1386|Bacillus	91061|Bacilli	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_00205	224308.BSU02010	2.55e-215	596.0	COG0642@1|root,COG0642@2|Bacteria,1VQZ2@1239|Firmicutes,4HT7I@91061|Bacilli,1ZQJ2@1386|Bacillus	91061|Bacilli	T	His Kinase A (phospho-acceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
PHALIAPI_00207	224308.BSU02030	1.96e-178	497.0	COG0515@1|root,COG0515@2|Bacteria,1V0NM@1239|Firmicutes,4IPTS@91061|Bacilli,1ZREF@1386|Bacillus	91061|Bacilli	KLT	Protein tyrosine kinase	ybdM	-	2.7.11.1	ko:K08884	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	Pkinase
PHALIAPI_00208	224308.BSU02040	6.07e-192	534.0	2ET76@1|root,33KR7@2|Bacteria,1VMH7@1239|Firmicutes,4ISWQ@91061|Bacilli,1ZDRK@1386|Bacillus	91061|Bacilli	-	-	ybdN	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00209	224308.BSU02050	2.57e-273	749.0	28KQP@1|root,2ZA8F@2|Bacteria,1UY56@1239|Firmicutes,4IV8V@91061|Bacilli,1ZFX7@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF4885)	ybdO	-	-	-	-	-	-	-	-	-	-	-	DUF4885
PHALIAPI_00210	224308.BSU02060	0.0	890.0	COG1113@1|root,COG1113@2|Bacteria,1TP97@1239|Firmicutes,4H9QX@91061|Bacilli,1ZAQB@1386|Bacillus	91061|Bacilli	E	COG1113 Gamma-aminobutyrate permease and related permeases	ybxG	-	-	ko:K03293	-	-	-	-	ko00000	2.A.3.1	-	-	AA_permease
PHALIAPI_00211	224308.BSU02070	5.46e-51	161.0	2C58K@1|root,32Y9K@2|Bacteria,1VESG@1239|Firmicutes,4HQS0@91061|Bacilli,1ZIZ4@1386|Bacillus	91061|Bacilli	S	Sigma-G-dependent sporulation-specific SASP protein	csgA	-	-	-	-	-	-	-	-	-	-	-	CsgA
PHALIAPI_00212	224308.BSU02080	6.92e-41	134.0	2E4N3@1|root,32ZGZ@2|Bacteria,1VJY0@1239|Firmicutes,4HPM3@91061|Bacilli,1ZJCF@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5370)	ybxH	-	-	-	-	-	-	-	-	-	-	-	DUF5370
PHALIAPI_00213	224308.BSU02090	2.5e-191	531.0	COG2602@1|root,COG2602@2|Bacteria,1VZ0X@1239|Firmicutes,4HTVD@91061|Bacilli,1ZQP5@1386|Bacillus	91061|Bacilli	V	beta-lactamase	ybxI	-	3.5.2.6	ko:K17838	ko01501,map01501	-	R06363	RC01499	ko00000,ko00001,ko01000	-	-	-	Transpeptidase
PHALIAPI_00214	224308.BSU02100	3.29e-315	857.0	COG2124@1|root,COG2124@2|Bacteria,1TP02@1239|Firmicutes,4HAIY@91061|Bacilli,1ZB7N@1386|Bacillus	91061|Bacilli	Q	Cytochrome P450	cypC	-	1.11.2.4	ko:K15629	-	-	R09740	-	ko00000,ko00199,ko01000	-	-	-	p450
PHALIAPI_00215	224308.BSU02110	1.11e-54	171.0	2E6UJ@1|root,331E9@2|Bacteria,1VHQQ@1239|Firmicutes,4HPYC@91061|Bacilli,1ZK3H@1386|Bacillus	91061|Bacilli	-	-	ybyB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00216	224308.BSU02120	0.0	1052.0	COG0531@1|root,COG0531@2|Bacteria,1TPJH@1239|Firmicutes,4HC13@91061|Bacilli,1ZCG6@1386|Bacillus	91061|Bacilli	E	amino acid	ybeC	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039	-	-	-	-	-	-	-	-	-	-	AA_permease_2
PHALIAPI_00217	224308.BSU02130	3.89e-208	575.0	COG0584@1|root,COG0584@2|Bacteria,1UY23@1239|Firmicutes,4HEAD@91061|Bacilli,1ZCIE@1386|Bacillus	91061|Bacilli	C	glycerophosphoryl diester phosphodiesterase	glpQ	-	3.1.3.1,3.1.4.46	ko:K01113,ko:K01126	ko00564,ko00790,ko01100,ko02020,map00564,map00790,map01100,map02020	M00126	R01030,R01470,R04620	RC00017,RC00425	ko00000,ko00001,ko00002,ko01000	-	-	-	GDPD,PhoD,PhoD_N
PHALIAPI_00218	224308.BSU02140	0.0	894.0	COG2271@1|root,COG2271@2|Bacteria,1TS33@1239|Firmicutes,4HE0X@91061|Bacilli,1ZE0D@1386|Bacillus	91061|Bacilli	G	-transporter	glpT	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02445	-	-	-	-	ko00000,ko02000	2.A.1.4.3	-	-	MFS_1
PHALIAPI_00219	224308.BSU02150	2.07e-46	149.0	2BF7G@1|root,32900@2|Bacteria,1UBBD@1239|Firmicutes,4IMQB@91061|Bacilli,1ZKKX@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2651)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2651
PHALIAPI_00220	224308.BSU02160	2.87e-216	597.0	COG0454@1|root,COG1846@1|root,COG0456@2|Bacteria,COG1846@2|Bacteria,1VHDQ@1239|Firmicutes,4HQ0R@91061|Bacilli,1ZF1Z@1386|Bacillus	91061|Bacilli	K	FR47-like protein	ybfA	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,MarR,MarR_2
PHALIAPI_00221	224308.BSU02170	9.18e-285	780.0	COG2271@1|root,COG2271@2|Bacteria,1TRHT@1239|Firmicutes,4HDG8@91061|Bacilli,1ZCIM@1386|Bacillus	91061|Bacilli	G	COG0477 Permeases of the major facilitator superfamily	ybfB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_00223	224308.BSU02210	1.19e-204	568.0	COG0697@1|root,COG0697@2|Bacteria,1TRKE@1239|Firmicutes,4HFHC@91061|Bacilli,1ZCN0@1386|Bacillus	91061|Bacilli	EG	EamA-like transporter family	ybfH	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_00224	224308.BSU02220	2.12e-187	521.0	COG1917@1|root,COG2207@1|root,COG1917@2|Bacteria,COG2207@2|Bacteria,1TPNZ@1239|Firmicutes,4HDP3@91061|Bacilli,1ZDS6@1386|Bacillus	91061|Bacilli	K	AraC-like ligand binding domain	ybfI	GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
PHALIAPI_00225	1395513.P343_06970	1.15e-186	525.0	COG1397@1|root,COG1397@2|Bacteria,1TQXG@1239|Firmicutes,4HE5F@91061|Bacilli	91061|Bacilli	O	ADP-ribosylglycohydrolase	draG	-	-	-	-	-	-	-	-	-	-	-	ADP_ribosyl_GH
PHALIAPI_00226	1395513.P343_06975	3.89e-85	276.0	COG5585@1|root,COG5585@2|Bacteria,1V069@1239|Firmicutes,4HD0D@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	ADPrib_exo_Tox,PT-TG
PHALIAPI_00227	1403313.AXBR01000002_gene4434	6.78e-29	119.0	COG5444@1|root,COG5444@2|Bacteria,1UZ44@1239|Firmicutes,4HDSN@91061|Bacilli,1ZB37@1386|Bacillus	91061|Bacilli	S	LXG domain of WXG superfamily	-	-	-	-	-	-	-	-	-	-	-	-	LXG,Ntox15,PT-TG
PHALIAPI_00228	224308.BSU02230	2.18e-269	738.0	COG0027@1|root,COG0027@2|Bacteria,1UI4R@1239|Firmicutes,4HEI0@91061|Bacilli,1ZCNZ@1386|Bacillus	91061|Bacilli	F	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate	purT	-	2.1.2.2	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp,Epimerase
PHALIAPI_00229	224308.BSU02240	4.14e-229	630.0	COG3591@1|root,COG3591@2|Bacteria,1VC6K@1239|Firmicutes,4HKUW@91061|Bacilli	91061|Bacilli	M	Belongs to the peptidase S1B family	mpr	GO:0005575,GO:0005576	-	-	-	-	-	-	-	-	-	-	CW_binding_1,Trypsin,Trypsin_2
PHALIAPI_00231	224308.BSU02260	1.26e-210	582.0	COG0596@1|root,COG0596@2|Bacteria,1V0M4@1239|Firmicutes,4HPRJ@91061|Bacilli,1ZHQC@1386|Bacillus	91061|Bacilli	S	Alpha/beta hydrolase family	-	GO:0003674,GO:0003824,GO:0016787	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
PHALIAPI_00232	224308.BSU02270	5.67e-123	350.0	COG1183@1|root,COG1183@2|Bacteria,1TR44@1239|Firmicutes,4HMYA@91061|Bacilli,1ZFNJ@1386|Bacillus	91061|Bacilli	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pssA	GO:0003674,GO:0003824,GO:0003882,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576	2.7.8.8	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	M00093	R01800	RC00002,RC00017,RC02795	ko00000,ko00001,ko00002,ko01000	-	-	-	CDP-OH_P_transf
PHALIAPI_00233	224308.BSU02280	7.07e-112	321.0	COG0586@1|root,COG0586@2|Bacteria,1U42T@1239|Firmicutes,4HJQK@91061|Bacilli,1ZFPN@1386|Bacillus	91061|Bacilli	S	SNARE associated Golgi protein	ybfM	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
PHALIAPI_00234	224308.BSU02290	1.69e-187	521.0	COG0688@1|root,COG0688@2|Bacteria,1TR34@1239|Firmicutes,4HB6I@91061|Bacilli,1ZAZ4@1386|Bacillus	91061|Bacilli	I	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)	psd	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
PHALIAPI_00235	224308.BSU02300	1.41e-53	168.0	2EN3Y@1|root,33FS1@2|Bacteria,1VQE2@1239|Firmicutes,4HS9F@91061|Bacilli	91061|Bacilli	-	-	ybfN	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00236	224308.BSU02310	0.0	870.0	COG2312@1|root,COG2312@2|Bacteria,1V2D8@1239|Firmicutes,4HGGF@91061|Bacilli,1ZESJ@1386|Bacillus	91061|Bacilli	S	Erythromycin esterase	-	-	-	ko:K06880	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Erythro_esteras
PHALIAPI_00237	224308.BSU02330	2.35e-244	669.0	COG1054@1|root,COG1054@2|Bacteria,1TRG7@1239|Firmicutes,4HA0J@91061|Bacilli,1ZCR7@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0176 family	ybfQ	-	-	ko:K07146	-	-	-	-	ko00000	-	-	-	Rhodanese,Rhodanese_C
PHALIAPI_00238	224308.BSU02340	4.25e-273	750.0	COG1301@1|root,COG1301@2|Bacteria,1VQUE@1239|Firmicutes,4HU9Y@91061|Bacilli,1ZE4T@1386|Bacillus	91061|Bacilli	C	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	gltP	-	-	ko:K11102	-	-	-	-	ko00000,ko02000	2.A.23.1.1,2.A.23.1.2	-	-	SDF
PHALIAPI_00239	224308.BSU02350	0.0	1208.0	COG1263@1|root,COG1264@1|root,COG2190@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,COG2190@2|Bacteria,1TPJ8@1239|Firmicutes,4HA8X@91061|Bacilli,1ZC48@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	ptsG	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.7.1.199	ko:K02763,ko:K02764,ko:K02765,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	M00282,M00809	R02631,R02738	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.13,4.A.1.1.14,4.A.1.1.6,4.A.1.1.9	-	-	PTS_EIIA_1,PTS_EIIB,PTS_EIIC
PHALIAPI_00240	224308.BSU02360	8.3e-172	480.0	COG0363@1|root,COG0363@2|Bacteria,1TP10@1239|Firmicutes,4HAG4@91061|Bacilli,1ZMA5@1386|Bacillus	91061|Bacilli	G	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion	nagB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	3.5.99.6	ko:K02564	ko00520,ko01100,map00520,map01100	-	R00765	RC00163	ko00000,ko00001,ko01000	-	-	iYO844.BSU02360,iYO844.BSU35020	Glucosamine_iso
PHALIAPI_00241	224308.BSU02370	4.67e-165	462.0	COG2188@1|root,COG2188@2|Bacteria,1TVMZ@1239|Firmicutes,4H9TD@91061|Bacilli,1ZF1V@1386|Bacillus	91061|Bacilli	K	UTRA	-	-	-	ko:K03710,ko:K10711	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
PHALIAPI_00243	224308.BSU02390	4.3e-255	699.0	COG0115@1|root,COG0115@2|Bacteria,1TQQI@1239|Firmicutes,4HASX@91061|Bacilli,1ZBFM@1386|Bacillus	91061|Bacilli	E	Branched-chain amino acid aminotransferase	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	iYO844.BSU38550	Aminotran_4
PHALIAPI_00244	224308.BSU02400	0.0	902.0	COG0833@1|root,COG0833@2|Bacteria,1UHNR@1239|Firmicutes,4HUT7@91061|Bacilli,1ZB12@1386|Bacillus	91061|Bacilli	E	amino acid	ybgF	GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016020,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901605	-	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	-	-	-	ko00000,ko02000	2.A.3.1,2.A.3.1.10	-	iYO844.BSU39390	AA_permease
PHALIAPI_00245	224308.BSU02410	3.55e-231	635.0	COG2040@1|root,COG2040@2|Bacteria,1UHQ5@1239|Firmicutes,4HAS6@91061|Bacilli,1ZC9Q@1386|Bacillus	91061|Bacilli	H	homocysteine	mmuM	-	2.1.1.10	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	-	R00650	RC00003,RC00035	ko00000,ko00001,ko01000	-	-	-	S-methyl_trans
PHALIAPI_00247	224308.BSU02420	0.0	889.0	COG1115@1|root,COG1115@2|Bacteria,1TNZP@1239|Firmicutes,4H9SZ@91061|Bacilli,1ZAX7@1386|Bacillus	91061|Bacilli	E	Sodium alanine symporter	agcS	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03310,ko:K11626	ko02020,map02020	-	-	-	ko00000,ko00001	2.A.25	-	-	Na_Ala_symp
PHALIAPI_00248	224308.BSU02430	2.52e-237	652.0	COG2066@1|root,COG2066@2|Bacteria,1TP64@1239|Firmicutes,4H9XA@91061|Bacilli,1ZBXX@1386|Bacillus	91061|Bacilli	E	Belongs to the glutaminase family	glsA	GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	iYO844.BSU02430	Glutaminase
PHALIAPI_00249	224308.BSU02440	1.84e-292	801.0	COG4191@1|root,COG4191@2|Bacteria,1UHS4@1239|Firmicutes,4HCZT@91061|Bacilli,1ZD9G@1386|Bacillus	91061|Bacilli	T	Histidine kinase	glnJ	-	2.7.13.3	ko:K07717	ko02020,map02020	M00518	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c
PHALIAPI_00250	224308.BSU02450	1.72e-217	601.0	COG0784@1|root,COG0784@2|Bacteria,1UHS3@1239|Firmicutes,4HBYG@91061|Bacilli,1ZBP6@1386|Bacillus	91061|Bacilli	T	Regulator	glnL	-	-	ko:K07719	ko02020,map02020	M00518	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,YcbB
PHALIAPI_00251	224308.BSU02460	1.95e-220	608.0	COG0329@1|root,COG0329@2|Bacteria,1UHED@1239|Firmicutes,4HAUA@91061|Bacilli,1ZASZ@1386|Bacillus	91061|Bacilli	EM	5-dehydro-4-deoxyglucarate dehydratase activity	ycbC	-	4.2.1.41	ko:K01707	ko00053,ko01100,map00053,map01100	-	R02279	RC00678	ko00000,ko00001,ko01000	-	-	-	DHDPS
PHALIAPI_00252	224308.BSU02470	0.0	946.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4H9MF@91061|Bacilli,1ZAXK@1386|Bacillus	91061|Bacilli	C	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively	ycbD	-	-	ko:K22187	ko00040,map00040	-	R11768	RC00080	ko00000,ko00001,ko01000	-	-	-	Aldedh
PHALIAPI_00253	224308.BSU02480	0.0	889.0	COG2271@1|root,COG2271@2|Bacteria,1TP6X@1239|Firmicutes,4HEVA@91061|Bacilli,1ZCX2@1386|Bacillus	91061|Bacilli	G	COG0477 Permeases of the major facilitator superfamily	gudP	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0044425,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K03535,ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.1,2.A.1.14.2	-	iYO844.BSU02480	MFS_1
PHALIAPI_00254	224308.BSU02490	0.0	922.0	COG4948@1|root,COG4948@2|Bacteria,1TUWS@1239|Firmicutes,4HCCY@91061|Bacilli,1ZE3M@1386|Bacillus	91061|Bacilli	M	Belongs to the mandelate racemase muconate lactonizing enzyme family	gudD	-	4.2.1.40	ko:K01706	ko00053,ko01100,map00053,map01100	-	R02752,R08056	RC00543	ko00000,ko00001,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
PHALIAPI_00255	224308.BSU02500	2.3e-161	452.0	COG2186@1|root,COG2186@2|Bacteria,1UZ3J@1239|Firmicutes,4HCTE@91061|Bacilli,1ZEQX@1386|Bacillus	91061|Bacilli	K	FCD	ycbG	-	-	ko:K05799	-	-	-	-	ko00000,ko03000	-	-	-	FCD,GntR
PHALIAPI_00256	224308.BSU02510	0.0	1014.0	COG2721@1|root,COG2721@2|Bacteria,1TPTX@1239|Firmicutes,4HAQZ@91061|Bacilli,1ZB6X@1386|Bacillus	91061|Bacilli	G	Altronate	garD	GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0008789,GO:0008867,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019577,GO:0019579,GO:0019580,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046392,GO:0046395,GO:0046396,GO:0046397,GO:0071704,GO:0072329,GO:1901575	4.2.1.42,4.2.1.7	ko:K01685,ko:K01708	ko00040,ko00053,ko01100,map00040,map00053,map01100	M00631	R01540,R05608	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU02510	GD_AH_C,SAF
PHALIAPI_00257	224308.BSU02520	1.49e-223	615.0	COG3173@1|root,COG3173@2|Bacteria,1TPYB@1239|Firmicutes,4HBYQ@91061|Bacilli,1ZDCM@1386|Bacillus	91061|Bacilli	S	Macrolide 2'-phosphotransferase	ycbJ	-	-	ko:K06979	-	M00760	-	-	br01600,ko00000,ko00002,ko01504	-	-	-	APH
PHALIAPI_00258	224308.BSU02530	3.57e-32	111.0	2CJT0@1|root,2ZS83@2|Bacteria,1W42W@1239|Firmicutes,4HZX8@91061|Bacilli	91061|Bacilli	K	Tryptophan RNA-binding attenuator protein inhibitory protein	rtpA	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	-	-	-	-	-	-	-	-	-	Anti-TRAP
PHALIAPI_00259	224308.BSU02540	3.07e-214	592.0	COG0697@1|root,COG0697@2|Bacteria	2|Bacteria	EG	spore germination	eamA1	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_00260	224308.BSU02550	2.61e-160	449.0	COG0745@1|root,COG0745@2|Bacteria,1TRK5@1239|Firmicutes,4HE4N@91061|Bacilli,1ZDIJ@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	ycbL	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_00261	224308.BSU02560	3.75e-215	595.0	COG0642@1|root,COG2205@2|Bacteria,1TPK5@1239|Firmicutes,4HC46@91061|Bacilli,1ZBGU@1386|Bacillus	91061|Bacilli	T	Histidine kinase	ycbM	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
PHALIAPI_00262	224308.BSU02570	1.52e-212	588.0	COG1131@1|root,COG1131@2|Bacteria,1TPBQ@1239|Firmicutes,4HC5D@91061|Bacilli,1ZDHR@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_00263	224308.BSU02580	9.58e-147	415.0	COG1277@1|root,2Z9TS@2|Bacteria,1TPNJ@1239|Firmicutes,4HGY0@91061|Bacilli,1ZGQ2@1386|Bacillus	91061|Bacilli	S	ABC-2 family transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane_4
PHALIAPI_00264	224308.BSU02590	2.21e-76	229.0	2E4BW@1|root,32Z7G@2|Bacteria,1VH0F@1239|Firmicutes,4HPQD@91061|Bacilli,1ZJ7Q@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2512)	ycbP	-	-	-	-	-	-	-	-	-	-	-	DUF2512
PHALIAPI_00265	224308.BSU02600	1.5e-101	293.0	COG3773@1|root,COG3773@2|Bacteria,1V3QK@1239|Firmicutes,4HH00@91061|Bacilli,1ZGB9@1386|Bacillus	91061|Bacilli	M	Cell wall	cwlJ	-	3.5.1.28	ko:K01449	-	-	R04112	RC00064,RC00141	ko00000,ko01000	-	-	-	Hydrolase_2
PHALIAPI_00266	224308.BSU02610	1.75e-170	476.0	COG2304@1|root,COG2304@2|Bacteria,1UZ85@1239|Firmicutes,4HCUJ@91061|Bacilli,1ZE5Y@1386|Bacillus	91061|Bacilli	T	vWA found in TerF C terminus	ycbR	-	-	-	-	-	-	-	-	-	-	-	TerD,vWA-TerF-like
PHALIAPI_00267	224308.BSU02620	0.0	1188.0	COG3540@1|root,COG3540@2|Bacteria,1UZSJ@1239|Firmicutes,4HE16@91061|Bacilli,1ZB15@1386|Bacillus	91061|Bacilli	P	COG3540 Phosphodiesterase alkaline phosphatase D	phoD	-	3.1.3.1	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	M00126	R04620	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PhoD,PhoD_N
PHALIAPI_00268	224308.BSU02630	3.12e-38	128.0	COG1826@1|root,COG1826@2|Bacteria,1VFP2@1239|Firmicutes,4HNM7@91061|Bacilli,1ZIUG@1386|Bacillus	91061|Bacilli	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system	tatAD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
PHALIAPI_00269	224308.BSU02640	5.12e-158	444.0	COG0805@1|root,COG0805@2|Bacteria,1U7N7@1239|Firmicutes,4HB1U@91061|Bacilli,1ZBYZ@1386|Bacillus	91061|Bacilli	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes	tatC	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
PHALIAPI_00270	224308.BSU02650	1.99e-153	431.0	COG2039@1|root,COG2039@2|Bacteria,1TRRX@1239|Firmicutes,4HCIJ@91061|Bacilli,1ZEI9@1386|Bacillus	91061|Bacilli	O	Removes 5-oxoproline from various penultimate amino acid residues except L-proline	pcp	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901564	3.4.19.3	ko:K01304	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_C15
PHALIAPI_00271	224308.BSU02660	2.81e-258	709.0	COG0520@1|root,COG0520@2|Bacteria,1TRDP@1239|Firmicutes,4HBP7@91061|Bacilli,1ZQ2U@1386|Bacillus	91061|Bacilli	E	Selenocysteine lyase	ycbU	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
PHALIAPI_00272	224308.BSU02670	2.87e-308	844.0	COG0477@1|root,COG0477@2|Bacteria,1UNMW@1239|Firmicutes,4HFCU@91061|Bacilli,1ZS2J@1386|Bacillus	91061|Bacilli	EGP	the major facilitator superfamily	lmrB	-	-	ko:K18926	-	M00715	-	-	ko00000,ko00002,ko02000	2.A.1.3.30	-	-	MFS_1
PHALIAPI_00273	224308.BSU02680	1.54e-130	370.0	COG1309@1|root,COG1309@2|Bacteria,1V9W3@1239|Firmicutes,4IPY1@91061|Bacilli,1ZREG@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	lmrA	-	-	ko:K18939	-	M00715	-	-	ko00000,ko00002,ko03000	-	-	-	TetR_N
PHALIAPI_00274	224308.BSU02690	1.19e-257	707.0	COG0252@1|root,COG0252@2|Bacteria,1TPP9@1239|Firmicutes,4H9YJ@91061|Bacilli,1ZAZT@1386|Bacillus	91061|Bacilli	EJ	COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D	ansB	GO:0003674,GO:0003824,GO:0004067,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006528,GO:0006530,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009066,GO:0009068,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032787,GO:0034641,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0071704,GO:0072329,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
PHALIAPI_00275	224308.BSU02700	4e-147	414.0	COG1075@1|root,COG1075@2|Bacteria,1VVU8@1239|Firmicutes,4HWN0@91061|Bacilli,1ZB57@1386|Bacillus	91061|Bacilli	S	acetyltransferases and hydrolases with the alpha beta hydrolase fold	-	GO:0003674,GO:0003824,GO:0004806,GO:0005575,GO:0005576,GO:0016298,GO:0016787,GO:0016788,GO:0052689	3.1.1.3	ko:K01046	ko00561,ko01100,map00561,map01100	M00098	R02250,R02687	RC00020,RC00037,RC00041,RC00094	ko00000,ko00001,ko00002,ko01000	-	-	-	Lipase_2
PHALIAPI_00276	224308.BSU02710	2.31e-73	221.0	COG1714@1|root,COG1714@2|Bacteria	2|Bacteria	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
PHALIAPI_00277	224308.BSU02720	1.01e-254	699.0	COG1405@1|root,COG3012@1|root,COG1405@2|Bacteria,COG3012@2|Bacteria,1V8NE@1239|Firmicutes,4HK5V@91061|Bacilli,1ZE7P@1386|Bacillus	91061|Bacilli	K	SEC-C motif	yccF	-	-	ko:K07039	-	-	-	-	ko00000	-	-	-	HTH_psq,SEC-C
PHALIAPI_00278	224308.BSU02730	8.4e-211	584.0	COG3290@1|root,COG3290@2|Bacteria,1VK8U@1239|Firmicutes,4HR8P@91061|Bacilli,1ZEI5@1386|Bacillus	91061|Bacilli	T	GHKL domain	natK	-	2.7.13.3	ko:K11640	ko02020,map02020	M00494	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c_5,SPOB_a
PHALIAPI_00279	224308.BSU02740	6.86e-163	456.0	COG3279@1|root,COG3279@2|Bacteria,1V14X@1239|Firmicutes,4HGFK@91061|Bacilli,1ZAPX@1386|Bacillus	91061|Bacilli	T	LytTr DNA-binding domain	natR	-	-	ko:K02477,ko:K11641	ko02020,map02020	M00494	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	LytTR,Response_reg
PHALIAPI_00280	224308.BSU02750	2.2e-170	476.0	COG4555@1|root,COG4555@2|Bacteria,1UHYH@1239|Firmicutes,4ISGA@91061|Bacilli,1ZC0Y@1386|Bacillus	91061|Bacilli	CP	ATPases associated with a variety of cellular activities	natA	-	3.6.3.7	ko:K01990,ko:K09697	ko02010,ko02020,map02010,map02020	M00253,M00254	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1,3.A.1.115	-	iYO844.BSU02750	ABC_tran
PHALIAPI_00281	224308.BSU02760	6.29e-254	699.0	COG1668@1|root,COG1668@2|Bacteria,1V8IQ@1239|Firmicutes,4IQWM@91061|Bacilli,1ZRP0@1386|Bacillus	91061|Bacilli	CP	ABC-2 family transporter protein	-	-	-	ko:K09696	ko02010,ko02020,map02010,map02020	M00253	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.115	-	iYO844.BSU02760	ABC2_membrane_2
PHALIAPI_00282	224308.BSU02770	2.77e-221	610.0	COG0667@1|root,COG0667@2|Bacteria,1TPIY@1239|Firmicutes,4HA4Q@91061|Bacilli,1ZCES@1386|Bacillus	91061|Bacilli	C	Aldo keto reductase	yccK	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
PHALIAPI_00283	224308.BSU02780	1.35e-241	665.0	2CEN8@1|root,32ESZ@2|Bacteria,1V92B@1239|Firmicutes,4HJUE@91061|Bacilli,1ZFKF@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF5105)	ycdA	-	-	-	-	-	-	-	-	-	-	-	DUF4352,DUF5105
PHALIAPI_00284	224308.BSU02790	0.0	931.0	COG1595@1|root,COG1595@2|Bacteria,1VB3P@1239|Firmicutes,4HMZV@91061|Bacilli,1ZH8C@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	ycdB	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	DUF4901,Sigma70_r2,Sigma70_r4_2
PHALIAPI_00285	224308.BSU02800	0.0	896.0	COG1595@1|root,COG1595@2|Bacteria,1VB3P@1239|Firmicutes,4HMZV@91061|Bacilli	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	ycdC	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	DUF4901,Sigma70_r2,Sigma70_r4_2
PHALIAPI_00286	224308.BSU02810	3.93e-119	340.0	COG1876@1|root,COG1876@2|Bacteria,1V69M@1239|Firmicutes,4HJT3@91061|Bacilli,1ZPVJ@1386|Bacillus	91061|Bacilli	M	D-alanyl-D-alanine carboxypeptidase	-	-	-	ko:K17733	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_M15_4
PHALIAPI_00287	224308.BSU02820	1.65e-247	682.0	COG0457@1|root,COG0457@2|Bacteria,1UBN0@1239|Firmicutes,4IN2J@91061|Bacilli,1ZMNF@1386|Bacillus	91061|Bacilli	S	Response regulator aspartate phosphatase	rapJ	-	-	ko:K06368	-	-	-	-	ko00000,ko01000	-	-	-	TPR_12
PHALIAPI_00288	224308.BSU02830	9.73e-180	501.0	COG1028@1|root,COG1028@2|Bacteria,1VTHQ@1239|Firmicutes,4HTXP@91061|Bacilli,1ZQ6B@1386|Bacillus	91061|Bacilli	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	1.1.1.47	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	-	R01520,R01521	RC00066	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
PHALIAPI_00289	224308.BSU02840	0.0	1179.0	COG0366@1|root,COG0366@2|Bacteria,1TP53@1239|Firmicutes,4HA1G@91061|Bacilli,1ZASC@1386|Bacillus	91061|Bacilli	G	COG0366 Glycosidases	malL	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.2.1.10,3.2.1.20	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R01718,R01791,R06087,R06088,R06199	RC00028,RC00049,RC00059,RC00077,RC00451	ko00000,ko00001,ko01000	-	GH13,GH31	-	Alpha-amylase,Malt_amylase_C
PHALIAPI_00290	224308.BSU02850	1.95e-221	611.0	COG0803@1|root,COG0803@2|Bacteria,1TPG7@1239|Firmicutes,4H9UN@91061|Bacilli,1ZC2Z@1386|Bacillus	91061|Bacilli	P	Belongs to the bacterial solute-binding protein 9 family	adcA	-	-	ko:K09815	ko02010,map02010	M00242	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15.3,3.A.1.15.5	-	-	ZinT,ZnuA
PHALIAPI_00291	224308.BSU02860	2.32e-169	472.0	COG1121@1|root,COG1121@2|Bacteria,1TQ68@1239|Firmicutes,4HAZI@91061|Bacilli,1ZBS5@1386|Bacillus	91061|Bacilli	P	'COG1121 ABC-type Mn Zn transport systems, ATPase component'	adcC	-	-	ko:K02074,ko:K09817	ko02010,map02010	M00242,M00244	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.15,3.A.1.15.3,3.A.1.15.5	-	iYO844.BSU02860	ABC_tran
PHALIAPI_00292	224308.BSU02870	2.2e-171	481.0	COG1108@1|root,COG1108@2|Bacteria,1TR79@1239|Firmicutes,4HC3C@91061|Bacilli,1ZB0A@1386|Bacillus	91061|Bacilli	P	COG1108 ABC-type Mn2 Zn2 transport systems, permease components	adcB	GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944	-	ko:K09816	ko02010,map02010	M00242	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15.3,3.A.1.15.5	-	-	ABC-3
PHALIAPI_00293	224308.BSU02880	8.1e-236	649.0	COG2141@1|root,COG2141@2|Bacteria,1TPRS@1239|Firmicutes,4H9R2@91061|Bacilli,1ZB1E@1386|Bacillus	91061|Bacilli	C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	yceB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
PHALIAPI_00294	224308.BSU02890	1.78e-139	394.0	COG2310@1|root,COG2310@2|Bacteria,1TR98@1239|Firmicutes,4HBM3@91061|Bacilli,1ZD3Z@1386|Bacillus	91061|Bacilli	T	proteins involved in stress response, homologs of TerZ and	yceC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.5.4.33	ko:K11991	-	-	R10223	RC00477	ko00000,ko01000,ko03016	-	-	-	TerD
PHALIAPI_00295	224308.BSU02900	8.9e-137	387.0	COG2310@1|root,COG2310@2|Bacteria,1TNZQ@1239|Firmicutes,4HA7H@91061|Bacilli,1ZB1M@1386|Bacillus	91061|Bacilli	T	proteins involved in stress response, homologs of TerZ and	yceD	-	-	ko:K05795	-	-	-	-	ko00000	-	-	-	TerD
PHALIAPI_00296	224308.BSU02910	2.36e-136	385.0	COG2310@1|root,COG2310@2|Bacteria,1TNZQ@1239|Firmicutes,4HA7H@91061|Bacilli,1ZBCX@1386|Bacillus	91061|Bacilli	T	proteins involved in stress response, homologs of TerZ and	yceE	-	-	ko:K05795	-	-	-	-	ko00000	-	-	-	TerD
PHALIAPI_00297	224308.BSU02920	4.1e-176	491.0	COG0861@1|root,COG0861@2|Bacteria,1UVIJ@1239|Firmicutes,4HEKW@91061|Bacilli,1ZRX6@1386|Bacillus	91061|Bacilli	P	Protein of unknown function (DUF475)	yceF	-	-	ko:K05794	-	-	-	-	ko00000	-	-	-	TerC
PHALIAPI_00298	224308.BSU02930	0.0	1088.0	2BVVP@1|root,2Z9CR@2|Bacteria,1TRYC@1239|Firmicutes,4HC71@91061|Bacilli,1ZBR8@1386|Bacillus	91061|Bacilli	S	Putative component of 'biosynthetic module'	yceG	-	-	-	-	-	-	-	-	-	-	-	YceG_bac
PHALIAPI_00299	224308.BSU02940	8.49e-245	674.0	COG3853@1|root,COG3853@2|Bacteria,1TQVX@1239|Firmicutes,4HB7G@91061|Bacilli,1ZQEF@1386|Bacillus	91061|Bacilli	P	Belongs to the TelA family	yceH	-	-	-	-	-	-	-	-	-	-	-	TelA
PHALIAPI_00300	224308.BSU02950	2.7e-278	762.0	COG0477@1|root,COG0477@2|Bacteria,1UIFU@1239|Firmicutes,4ISWR@91061|Bacilli,1ZS7A@1386|Bacillus	91061|Bacilli	P	Uncharacterised MFS-type transporter YbfB	yceI	GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425	-	ko:K08369	-	-	-	-	ko00000,ko02000	2.A.1	-	-	MFS_1,MFS_4,Sugar_tr
PHALIAPI_00301	224308.BSU02960	8.39e-261	717.0	COG0477@1|root,COG2814@2|Bacteria,1TSS8@1239|Firmicutes,4HF36@91061|Bacilli,1ZMIV@1386|Bacillus	91061|Bacilli	EGP	Uncharacterised MFS-type transporter YbfB	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
PHALIAPI_00302	224308.BSU02970	4.82e-61	187.0	COG0640@1|root,COG0640@2|Bacteria,1UV2N@1239|Firmicutes,4I4FV@91061|Bacilli,1ZP5F@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_20
PHALIAPI_00303	224308.BSU02980	1.66e-288	789.0	COG0517@1|root,COG4175@1|root,COG0517@2|Bacteria,COG4175@2|Bacteria,1UHNE@1239|Firmicutes,4HA9P@91061|Bacilli,1ZS1P@1386|Bacillus	91061|Bacilli	E	glycine betaine	opuAA	-	3.6.3.32	ko:K02000	ko02010,map02010	M00208	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.12	-	-	ABC_tran,CBS
PHALIAPI_00304	224308.BSU02990	2.1e-186	520.0	COG4176@1|root,COG4176@2|Bacteria,1UHRI@1239|Firmicutes,4IS7D@91061|Bacilli,1ZS1Q@1386|Bacillus	91061|Bacilli	P	glycine betaine	opuAB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0008150,GO:0015695,GO:0015696,GO:0015871,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944	-	ko:K02001	ko02010,map02010	M00208	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	-	BPD_transp_1
PHALIAPI_00305	224308.BSU03000	5.76e-210	580.0	COG2113@1|root,COG2113@2|Bacteria,1TP82@1239|Firmicutes,4H9MM@91061|Bacilli,1ZS5A@1386|Bacillus	91061|Bacilli	E	glycine betaine	opuAC	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337	-	ko:K02001,ko:K02002	ko02010,map02010	M00208	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	-	BPD_transp_1,OpuAC
PHALIAPI_00306	224308.BSU03010	1.48e-271	743.0	COG1473@1|root,COG1473@2|Bacteria,1TQ7R@1239|Firmicutes,4HB6M@91061|Bacilli,1ZB9M@1386|Bacillus	91061|Bacilli	S	amidohydrolase	amhX	-	-	ko:K14665	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
PHALIAPI_00307	224308.BSU03020	0.0	892.0	COG1288@1|root,COG1288@2|Bacteria,1TQJ0@1239|Firmicutes,4H9P7@91061|Bacilli,1ZBC6@1386|Bacillus	91061|Bacilli	S	Membrane	ycgA	-	-	-	-	-	-	-	-	-	-	-	DcuC,Na_H_antiporter
PHALIAPI_00308	224308.BSU03030	2.72e-105	306.0	291CP@1|root,2ZNZI@2|Bacteria,1W2X5@1239|Firmicutes,4I0H4@91061|Bacilli,1ZK8J@1386|Bacillus	91061|Bacilli	-	-	ycgB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00309	224308.BSU03040	0.0	1316.0	COG0366@1|root,COG0366@2|Bacteria,1TQSE@1239|Firmicutes,4HEGR@91061|Bacilli	91061|Bacilli	G	alpha-amylase	amyE	-	3.2.1.1	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	-	R02108,R02112,R11262	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,CBM26,CBM_20,G5
PHALIAPI_00310	224308.BSU03050	1.62e-230	634.0	COG0039@1|root,COG0039@2|Bacteria,1TPSY@1239|Firmicutes,4HB0Z@91061|Bacilli,1ZD2C@1386|Bacillus	91061|Bacilli	C	Belongs to the LDH MDH superfamily. LDH family	ldh	GO:0003674,GO:0003824,GO:0004457,GO:0004459,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576	1.1.1.27	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	-	R00703,R01000,R03104	RC00031,RC00044	ko00000,ko00001,ko01000,ko04147	-	-	-	Ldh_1_C,Ldh_1_N
PHALIAPI_00311	224308.BSU03060	0.0	1003.0	COG1620@1|root,COG1620@2|Bacteria,1TQNM@1239|Firmicutes,4HAF3@91061|Bacilli,1ZC0U@1386|Bacillus	91061|Bacilli	C	L-lactate permease	lctP	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03303	-	-	-	-	ko00000,ko02000	2.A.14	-	-	Lactate_perm
PHALIAPI_00312	224308.BSU03070	0.0	925.0	COG0477@1|root,COG2814@2|Bacteria,1VSW8@1239|Firmicutes,4HUQC@91061|Bacilli,1ZAS8@1386|Bacillus	91061|Bacilli	EGP	the major facilitator superfamily	mdr	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_00313	224308.BSU03080	3.7e-101	293.0	COG1846@1|root,COG1846@2|Bacteria,1V8TC@1239|Firmicutes,4HK9G@91061|Bacilli,1ZBA1@1386|Bacillus	91061|Bacilli	K	helix_turn_helix multiple antibiotic resistance protein	ycgE	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_00314	224308.BSU03090	6.42e-147	414.0	COG1280@1|root,COG1280@2|Bacteria,1V1Q5@1239|Firmicutes,4HFVQ@91061|Bacilli,1ZEMW@1386|Bacillus	91061|Bacilli	E	Lysine exporter protein LysE YggA	ycgF	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015174,GO:0015181,GO:0015318,GO:0015711,GO:0015802,GO:0015807,GO:0015809,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902023,GO:1903825,GO:1903826,GO:1905039,GO:1990822	-	-	-	-	-	-	-	-	-	-	LysE
PHALIAPI_00315	224308.BSU03100	3.86e-188	521.0	COG3403@1|root,COG3403@2|Bacteria,1US5K@1239|Firmicutes,4HDGW@91061|Bacilli,1ZQUM@1386|Bacillus	91061|Bacilli	S	YqcI/YcgG family	yqcI	-	-	ko:K09190	-	-	-	-	ko00000	-	-	-	YqcI_YcgG
PHALIAPI_00316	224308.BSU03110	5.5e-315	858.0	COG1113@1|root,COG1113@2|Bacteria,1TP97@1239|Firmicutes,4H9QX@91061|Bacilli,1ZDGG@1386|Bacillus	91061|Bacilli	E	COG1113 Gamma-aminobutyrate permease and related permeases	ycgH	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03293	-	-	-	-	ko00000	2.A.3.1	-	-	AA_permease
PHALIAPI_00317	224308.BSU03120	1.26e-143	404.0	COG3665@1|root,COG3665@2|Bacteria,1V1VR@1239|Firmicutes,4HVM7@91061|Bacilli,1ZQJI@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF1989)	ycgI	-	-	ko:K09967	-	-	-	-	ko00000	-	-	-	DUF1989
PHALIAPI_00318	224308.BSU03130	1.83e-191	531.0	COG0171@1|root,COG0171@2|Bacteria,1TQ38@1239|Firmicutes,4HA2R@91061|Bacilli,1ZBM2@1386|Bacillus	91061|Bacilli	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source	nadE	GO:0000003,GO:0003674,GO:0003824,GO:0003952,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019954,GO:0030436,GO:0032502,GO:0034641,GO:0034654,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.1.5	ko:K01916	ko00760,ko01100,map00760,map01100	M00115	R00189	RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	NAD_synthase
PHALIAPI_00319	224308.BSU03140	2.09e-137	389.0	COG1660@1|root,COG1660@2|Bacteria,1V1TY@1239|Firmicutes,4HIVE@91061|Bacilli,1ZHR7@1386|Bacillus	91061|Bacilli	S	AAA domain	tmrB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	AAA_18
PHALIAPI_00321	224308.BSU03150	4.28e-136	384.0	COG0703@1|root,COG0703@2|Bacteria,1VA6Z@1239|Firmicutes,4HKD6@91061|Bacilli,1ZHX4@1386|Bacillus	91061|Bacilli	F	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate	aroK	GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615	2.7.1.71	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02412	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	SKI
PHALIAPI_00322	224308.BSU03160	1.98e-181	504.0	COG0500@1|root,COG2226@2|Bacteria,1UZN6@1239|Firmicutes,4HB38@91061|Bacilli,1ZCA4@1386|Bacillus	91061|Bacilli	Q	ubiE/COQ5 methyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
PHALIAPI_00323	224308.BSU03170	7.67e-226	623.0	COG0583@1|root,COG0583@2|Bacteria,1UZ63@1239|Firmicutes,4HDFA@91061|Bacilli,1ZFCM@1386|Bacillus	91061|Bacilli	K	LysR substrate binding domain	ycgK	-	-	ko:K04761	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
PHALIAPI_00324	224308.BSU03180	4.48e-231	635.0	COG3458@1|root,COG3458@2|Bacteria,1TS02@1239|Firmicutes,4HD1F@91061|Bacilli,1ZQXB@1386|Bacillus	91061|Bacilli	Q	Acetyl xylan esterase (AXE1)	cah	-	3.1.1.41	ko:K01060	ko00311,ko01130,map00311,map01130	-	R03062	RC00020,RC00041	ko00000,ko00001,ko01000	-	-	-	AXE1
PHALIAPI_00325	224308.BSU03190	5.24e-185	514.0	COG3541@1|root,COG3541@2|Bacteria,1TT57@1239|Firmicutes,4HD38@91061|Bacilli,1ZBMK@1386|Bacillus	91061|Bacilli	S	Predicted nucleotidyltransferase	ycgL	-	-	ko:K07074	-	-	-	-	ko00000	-	-	-	Nuc-transf
PHALIAPI_00326	224308.BSU03200	2.99e-217	599.0	COG0506@1|root,COG0506@2|Bacteria,1TQV3@1239|Firmicutes,4HAC1@91061|Bacilli,1ZB5G@1386|Bacillus	91061|Bacilli	E	Proline dehydrogenase	ycgM	GO:0000166,GO:0003674,GO:0003824,GO:0004657,GO:0005488,GO:0006082,GO:0006520,GO:0006560,GO:0006562,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016491,GO:0016645,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	-	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R10507	RC00083	ko00000,ko00001,ko01000	-	-	-	Pro_dh
PHALIAPI_00327	224308.BSU03210	0.0	1009.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4HBS1@91061|Bacilli,1ZCI4@1386|Bacillus	91061|Bacilli	C	Belongs to the aldehyde dehydrogenase family. RocA subfamily	rocA	-	1.2.1.88	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	-	R00245,R00707,R00708,R04444,R04445,R05051	RC00080,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000	-	-	iYO844.BSU37780	Aldedh
PHALIAPI_00328	224308.BSU03220	0.0	910.0	COG0591@1|root,COG0591@2|Bacteria,1TPVE@1239|Firmicutes,4H9KW@91061|Bacilli,1ZB64@1386|Bacillus	91061|Bacilli	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	putP	-	-	ko:K11928	-	-	-	-	ko00000,ko02000	2.A.21.2	-	-	SSF
PHALIAPI_00329	224308.BSU03230	3.22e-287	785.0	COG2508@1|root,COG2508@2|Bacteria,1UYDU@1239|Firmicutes,4HFGP@91061|Bacilli,1ZQ0M@1386|Bacillus	91061|Bacilli	QT	COG2508 Regulator of polyketide synthase expression	ycgP	-	-	-	-	-	-	-	-	-	-	-	HTH_30
PHALIAPI_00330	224308.BSU03240	1.82e-193	538.0	COG3689@1|root,COG3689@2|Bacteria,1V3EX@1239|Firmicutes,4HG9F@91061|Bacilli,1ZAQN@1386|Bacillus	91061|Bacilli	S	membrane	ycgQ	-	-	ko:K08986	-	-	-	-	ko00000	-	-	-	DUF1980
PHALIAPI_00331	224308.BSU03250	6.16e-185	517.0	COG0701@1|root,COG0701@2|Bacteria,1TQHK@1239|Firmicutes,4HB25@91061|Bacilli,1ZC03@1386|Bacillus	91061|Bacilli	S	permeases	ycgR	-	-	ko:K07089	-	-	-	-	ko00000	-	-	-	ArsP_1
PHALIAPI_00332	224308.BSU03260	1.99e-201	558.0	COG2267@1|root,COG2267@2|Bacteria,1TUXD@1239|Firmicutes,4HE1R@91061|Bacilli,1ZEWP@1386|Bacillus	91061|Bacilli	I	alpha/beta hydrolase fold	ycgS	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
PHALIAPI_00333	224308.BSU03270	5.52e-241	662.0	COG0492@1|root,COG0492@2|Bacteria,1TRPN@1239|Firmicutes,4HACJ@91061|Bacilli,1ZB05@1386|Bacillus	91061|Bacilli	C	Ferredoxin--NADP reductase	ycgT	GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281	1.18.1.2,1.19.1.1	ko:K21567	-	-	-	-	ko00000,ko01000	-	-	-	Pyr_redox_2,Pyr_redox_3
PHALIAPI_00334	224308.BSU03280	0.0	944.0	COG0007@1|root,COG1587@1|root,COG0007@2|Bacteria,COG1587@2|Bacteria,1TQNH@1239|Firmicutes,4HBB7@91061|Bacilli,1ZBV1@1386|Bacillus	91061|Bacilli	H	Belongs to the precorrin methyltransferase family	nasF	GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.1.107,4.2.1.75	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165,R03194	RC00003,RC00871,RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4,TP_methylase
PHALIAPI_00335	224308.BSU03290	3.45e-74	221.0	COG2146@1|root,COG2146@2|Bacteria,1VBNU@1239|Firmicutes,4HKDI@91061|Bacilli,1ZI6A@1386|Bacillus	91061|Bacilli	P	Nitrite reductase	nasE	-	1.7.1.15	ko:K00363	ko00910,ko01120,map00910,map01120	M00530	R00787	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU03290	Rieske,Rieske_2
PHALIAPI_00336	224308.BSU03300	0.0	1583.0	COG1251@1|root,COG1251@2|Bacteria,1TQYX@1239|Firmicutes,4HASM@91061|Bacilli,1ZQ9P@1386|Bacillus	91061|Bacilli	C	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family	nasD	-	1.7.1.15	ko:K00362	ko00910,ko01120,map00910,map01120	M00530	R00787	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,NIR_SIR,NIR_SIR_ferr,Pyr_redox_2
PHALIAPI_00337	224308.BSU03310	0.0	1398.0	COG0243@1|root,COG0243@2|Bacteria,1VTS0@1239|Firmicutes,4HAZ4@91061|Bacilli,1ZBMY@1386|Bacillus	91061|Bacilli	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	nasC	-	-	ko:K00372	ko00910,ko01120,map00910,map01120	M00531	R00798,R01106	RC02812	ko00000,ko00001,ko00002,ko01000	-	-	-	Molybdop_Fe4S4,Molybdopterin,Molydop_binding
PHALIAPI_00338	224308.BSU03320	0.0	1504.0	COG1251@1|root,COG1251@2|Bacteria,1UIY8@1239|Firmicutes,4ISWS@91061|Bacilli,1ZS7B@1386|Bacillus	91061|Bacilli	C	Assimilatory nitrate reductase (electron transfer subunit)	nasB	-	1.7.1.15	ko:K00362	ko00910,ko01120,map00910,map01120	M00530	R00787	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,NIR_SIR,NIR_SIR_ferr,Pyr_redox_2
PHALIAPI_00339	224308.BSU03330	5.51e-283	774.0	COG2223@1|root,COG2223@2|Bacteria,1TRS9@1239|Firmicutes,4HCY1@91061|Bacilli,1ZBQH@1386|Bacillus	91061|Bacilli	P	COG2223 Nitrate nitrite transporter	nasA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02575	ko00910,map00910	M00615	-	-	ko00000,ko00001,ko00002,ko02000	2.A.1.8	-	iYO844.BSU03330	MFS_1
PHALIAPI_00340	224308.BSU03340	2.88e-220	607.0	COG1469@1|root,COG1469@2|Bacteria,1TTA1@1239|Firmicutes,4H9P4@91061|Bacilli,1ZBW2@1386|Bacillus	91061|Bacilli	S	Converts GTP to 7,8-dihydroneopterin triphosphate	folE2	-	3.5.4.16	ko:K09007	ko00790,ko01100,map00790,map01100	M00126	R00428,R04639,R05046,R05048	RC00263,RC00294,RC00323,RC00945,RC01188	ko00000,ko00001,ko00002,ko01000	-	-	-	GCHY-1
PHALIAPI_00341	224308.BSU03350	2.99e-140	395.0	COG1376@1|root,COG1376@2|Bacteria,1V4KP@1239|Firmicutes,4HIBF@91061|Bacilli	91061|Bacilli	M	ErfK YbiS YcfS YnhG	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
PHALIAPI_00342	224308.BSU03360	7.59e-288	786.0	COG0523@1|root,COG0523@2|Bacteria,1TPCG@1239|Firmicutes,4HARN@91061|Bacilli,1ZCV4@1386|Bacillus	91061|Bacilli	S	GTPases (G3E family)	yciC	-	-	-	-	-	-	-	-	-	-	-	CobW_C,cobW
PHALIAPI_00343	224308.BSU03370	4.96e-148	418.0	COG0765@1|root,COG0765@2|Bacteria,1TQ43@1239|Firmicutes,4HCZV@91061|Bacilli,1ZQ0X@1386|Bacillus	91061|Bacilli	P	COG0765 ABC-type amino acid transport system, permease component	yckA	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K10009	ko02010,map02010	M00234	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.10,3.A.1.3.14	-	-	BPD_transp_1
PHALIAPI_00344	224308.BSU03380	1.26e-185	518.0	COG0834@1|root,COG0834@2|Bacteria,1UHHG@1239|Firmicutes,4H9NX@91061|Bacilli,1ZDH6@1386|Bacillus	91061|Bacilli	ET	COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain	yckB	-	-	ko:K02030,ko:K02424	ko02010,map02010	M00234,M00236	-	-	ko00000,ko00001,ko00002,ko02000,ko02035	3.A.1.3,3.A.1.3.10,3.A.1.3.14	-	-	SBP_bac_3
PHALIAPI_00346	224308.BSU03390	1.91e-82	245.0	COG1714@1|root,COG1714@2|Bacteria,1V6N5@1239|Firmicutes,4HJRB@91061|Bacilli,1ZI28@1386|Bacillus	91061|Bacilli	S	membrane	yckC	-	-	-	-	-	-	-	-	-	-	-	RDD
PHALIAPI_00347	224308.BSU03400	1.01e-68	208.0	28P1F@1|root,2ZBXS@2|Bacteria,1V1PR@1239|Firmicutes,4IAIX@91061|Bacilli,1ZIVA@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2680)	yckD	-	-	-	-	-	-	-	-	-	-	-	DUF2680
PHALIAPI_00348	224308.BSU03410	0.0	996.0	COG2723@1|root,COG2723@2|Bacteria,1TP19@1239|Firmicutes,4H9KU@91061|Bacilli,1ZBF2@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 1 family	yckE	GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008422,GO:0015926,GO:0016787,GO:0016798,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135,GO:1901657	3.2.1.21,3.2.1.86	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	-	R00026,R00839,R02558,R02887,R02985,R03527,R04949,R04998,R05133,R05134,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GT1	-	Glyco_hydro_1
PHALIAPI_00349	224308.BSU03420	6.53e-89	261.0	295FN@1|root,2ZSTE@2|Bacteria,1W3MU@1239|Firmicutes,4I00N@91061|Bacilli,1ZJNH@1386|Bacillus	91061|Bacilli	S	Competence protein J (ComJ)	nin	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	ComJ
PHALIAPI_00350	224308.BSU03430	7.94e-100	290.0	COG3209@1|root,COG3209@2|Bacteria,1V89J@1239|Firmicutes,4HJVE@91061|Bacilli,1ZG0N@1386|Bacillus	91061|Bacilli	M	Deoxyribonuclease NucA/NucB	nucA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	DNase_NucA_NucB,Excalibur
PHALIAPI_00351	224308.BSU03440	1.76e-266	746.0	COG0840@1|root,COG3290@1|root,COG0840@2|Bacteria,COG3290@2|Bacteria,1TP5A@1239|Firmicutes,4H9RZ@91061|Bacilli,1ZBEA@1386|Bacillus	91061|Bacilli	NT	chemotaxis protein	tlpC	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,sCache_3_3
PHALIAPI_00352	224308.BSU03450	3.64e-123	352.0	COG0794@1|root,COG0794@2|Bacteria,1UYG2@1239|Firmicutes,4IQVK@91061|Bacilli,1ZRNW@1386|Bacillus	91061|Bacilli	G	SIS domain	hxlB	-	5.3.1.27	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	M00345,M00580	R05339,R09780	RC00377	ko00000,ko00001,ko00002,ko01000	-	-	-	SIS
PHALIAPI_00353	224308.BSU03460	1.97e-137	390.0	COG0269@1|root,COG0269@2|Bacteria,1TQ55@1239|Firmicutes,4HBMT@91061|Bacilli,1ZBDI@1386|Bacillus	91061|Bacilli	G	3-hexulose-6-phosphate synthase	hxlA	GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.2.43	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	M00345,M00580	R05338	RC00421,RC00422	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
PHALIAPI_00354	224308.BSU03470	8.6e-86	252.0	COG1733@1|root,COG1733@2|Bacteria,1VA9M@1239|Firmicutes,4HH0A@91061|Bacilli,1ZH1P@1386|Bacillus	91061|Bacilli	K	transcriptional	hxlR	-	-	-	-	-	-	-	-	-	-	-	HxlR
PHALIAPI_00355	224308.BSU03480	0.0	6962.0	COG1020@1|root,COG1020@2|Bacteria,1TPTH@1239|Firmicutes,4HAHU@91061|Bacilli,1ZB3S@1386|Bacillus	91061|Bacilli	Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	srfAA	-	-	ko:K15654,ko:K15655,ko:K16119	ko01054,ko02024,map01054,map02024	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding
PHALIAPI_00356	224308.BSU03490	0.0	6956.0	COG1020@1|root,COG1020@2|Bacteria,1TPTH@1239|Firmicutes,4HAHU@91061|Bacilli,1ZB3S@1386|Bacillus	91061|Bacilli	Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	srfAB	-	-	ko:K15654,ko:K15655,ko:K16120	ko01054,ko02024,map01054,map02024	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding
PHALIAPI_00357	224308.BSU03510	0.0	2497.0	COG1020@1|root,COG1020@2|Bacteria,1VRPH@1239|Firmicutes,4HT9K@91061|Bacilli,1ZREH@1386|Bacillus	91061|Bacilli	Q	COG1020 Non-ribosomal peptide synthetase modules and related proteins	srfAC	-	-	ko:K15656,ko:K16121	ko01054,ko02024,map01054,map02024	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding,Thioesterase
PHALIAPI_00358	224308.BSU03520	1.29e-176	491.0	COG3208@1|root,COG3208@2|Bacteria,1V3KR@1239|Firmicutes,4HIG8@91061|Bacilli,1ZEUW@1386|Bacillus	91061|Bacilli	Q	thioesterase	srfAD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901576	-	ko:K15657	ko02024,map02024	-	-	-	ko00000,ko00001,ko01008	-	-	-	Thioesterase
PHALIAPI_00359	224308.BSU03530	1.04e-286	784.0	COG0477@1|root,COG2814@2|Bacteria,1UIY9@1239|Firmicutes,4HZ4P@91061|Bacilli,1ZS7C@1386|Bacillus	91061|Bacilli	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
PHALIAPI_00360	224308.BSU03540	8.93e-124	353.0	2E30Y@1|root,32Y1E@2|Bacteria,1VF3X@1239|Firmicutes,4HNVI@91061|Bacilli,1ZKJM@1386|Bacillus	91061|Bacilli	S	YcxB-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YcxB
PHALIAPI_00361	224308.BSU03550	4.64e-205	569.0	COG0697@1|root,COG0697@2|Bacteria,1TYSF@1239|Firmicutes,4HE6N@91061|Bacilli,1ZBXE@1386|Bacillus	91061|Bacilli	EG	EamA-like transporter family	ycxC	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_00362	224308.BSU03560	9.36e-317	862.0	COG1167@1|root,COG1167@2|Bacteria,1TPS5@1239|Firmicutes,4HBNK@91061|Bacilli,1ZCK8@1386|Bacillus	91061|Bacilli	K	GntR family transcriptional regulator	ycxD	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2,GntR
PHALIAPI_00363	1051501.AYTL01000031_gene1528	4.57e-143	405.0	COG2091@1|root,COG2091@2|Bacteria,1VEYZ@1239|Firmicutes,4HIVV@91061|Bacilli,1ZHU1@1386|Bacillus	91061|Bacilli	H	Belongs to the P-Pant transferase superfamily	sfp	-	-	ko:K06133	ko00770,map00770	-	R01625	RC00002	ko00000,ko00001,ko01000	-	-	-	ACPS
PHALIAPI_00364	224308.BSU03580	6.13e-148	417.0	COG2364@1|root,COG2364@2|Bacteria,1V47R@1239|Firmicutes,4HGYQ@91061|Bacilli,1ZG36@1386|Bacillus	91061|Bacilli	S	membrane	yczE	GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:1900190,GO:1900192,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	-	ko:K07149	-	-	-	-	ko00000	-	-	-	YitT_membrane
PHALIAPI_00365	224308.BSU03590	7.11e-172	480.0	COG1126@1|root,COG1126@2|Bacteria,1TNYD@1239|Firmicutes,4H9WY@91061|Bacilli,1ZB2E@1386|Bacillus	91061|Bacilli	E	COG1126 ABC-type polar amino acid transport system, ATPase component	tcyC	-	-	ko:K10010	ko02010,map02010	M00234	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3.10,3.A.1.3.14	-	iSB619.SA_RS12615	ABC_tran
PHALIAPI_00366	224308.BSU03600	4.6e-157	441.0	COG0765@1|root,COG0765@2|Bacteria,1TPQ8@1239|Firmicutes,4H9N1@91061|Bacilli,1ZBG5@1386|Bacillus	91061|Bacilli	P	COG0765 ABC-type amino acid transport system, permease component	tcyB	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K10009	ko02010,map02010	M00234	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.10,3.A.1.3.14	-	iYO844.BSU03600	BPD_transp_1
PHALIAPI_00367	224308.BSU03610	3.03e-188	523.0	COG0834@1|root,COG0834@2|Bacteria,1TR13@1239|Firmicutes,4HBRP@91061|Bacilli,1ZCH3@1386|Bacillus	91061|Bacilli	ET	Belongs to the bacterial solute-binding protein 3 family	tcyA	-	-	ko:K02424	ko02010,map02010	M00234	-	-	ko00000,ko00001,ko00002,ko02000,ko02035	3.A.1.3.10,3.A.1.3.14	-	-	SBP_bac_3
PHALIAPI_00368	224308.BSU03620	5.32e-209	577.0	COG0583@1|root,COG0583@2|Bacteria,1UXFR@1239|Firmicutes,4HBNZ@91061|Bacilli,1ZFHD@1386|Bacillus	91061|Bacilli	K	LysR substrate binding domain	yclA	GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363,GO:1990837	-	ko:K21755	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
PHALIAPI_00369	224308.BSU03630	2.24e-140	397.0	COG0163@1|root,COG0163@2|Bacteria,1V3JV@1239|Firmicutes,4HFZX@91061|Bacilli,1ZFID@1386|Bacillus	91061|Bacilli	H	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN	ubiX	GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0044237,GO:0044249,GO:0051186,GO:0051188	2.5.1.129	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	M00117	R01238,R02952,R03367,R04985,R04986,R11225	RC00391,RC00814,RC03392	ko00000,ko00001,ko00002,ko01000	-	-	-	Flavoprotein
PHALIAPI_00370	224308.BSU03640	0.0	969.0	COG0043@1|root,COG0043@2|Bacteria,1TQ6V@1239|Firmicutes,4HM1D@91061|Bacilli,1ZR0K@1386|Bacillus	91061|Bacilli	H	Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate	yclC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044464	4.1.1.61,4.1.1.98	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	M00117	R01238,R04985,R04986,R10213	RC00391,RC03086	ko00000,ko00001,ko00002,ko01000	-	-	-	UbiD
PHALIAPI_00371	224308.BSU03651	9.86e-53	165.0	2CK9M@1|root,32SBW@2|Bacteria,1VM7H@1239|Firmicutes,4HY8Z@91061|Bacilli,1ZJD7@1386|Bacillus	91061|Bacilli	S	response to toxic substance	-	-	4.1.1.61	ko:K21759	ko00627,ko01120,ko01220,map00627,map01120,map01220	-	R01238	RC00391	ko00000,ko00001,ko01000	-	-	-	-
PHALIAPI_00372	224308.BSU03652	1.7e-106	307.0	2DAI9@1|root,32TVI@2|Bacteria,1VD47@1239|Firmicutes,4HKCX@91061|Bacilli,1ZIAY@1386|Bacillus	91061|Bacilli	-	-	yclD	-	-	-	-	-	-	-	-	-	-	-	Putative_PNPOx
PHALIAPI_00373	224308.BSU03660	1.58e-201	558.0	COG0596@1|root,COG0596@2|Bacteria,1UZ0T@1239|Firmicutes,4HBH8@91061|Bacilli	91061|Bacilli	S	Alpha beta hydrolase	yclE	GO:0003674,GO:0003824,GO:0016787	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
PHALIAPI_00374	224308.BSU03670	0.0	930.0	COG3104@1|root,COG3104@2|Bacteria,1TP81@1239|Firmicutes,4HAF2@91061|Bacilli,1ZAVZ@1386|Bacillus	91061|Bacilli	E	amino acid peptide transporter	dtpT	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03305	-	-	-	-	ko00000	2.A.17	-	-	PTR2
PHALIAPI_00375	224308.BSU03680	0.0	1056.0	COG5434@1|root,COG5434@2|Bacteria,1V161@1239|Firmicutes,4HUBB@91061|Bacilli,1ZDR3@1386|Bacillus	91061|Bacilli	M	Pectate lyase superfamily protein	yclG	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,Pectate_lyase_3
PHALIAPI_00377	224308.BSU03700	0.0	976.0	COG0697@1|root,COG0697@2|Bacteria,1TP7K@1239|Firmicutes,4HAH1@91061|Bacilli,1ZBEF@1386|Bacillus	91061|Bacilli	EG	Spore germination protein	gerKA	-	-	ko:K06295,ko:K06307	-	-	-	-	ko00000	-	-	-	GerA
PHALIAPI_00378	224308.BSU03710	3.9e-286	782.0	2DBJR@1|root,2Z9N7@2|Bacteria,1TRSN@1239|Firmicutes,4HCDI@91061|Bacilli,1ZDF7@1386|Bacillus	91061|Bacilli	S	spore germination	gerKC	-	-	ko:K06297	-	-	-	-	ko00000	-	-	-	Spore_GerAC
PHALIAPI_00379	224308.BSU03720	1.36e-246	679.0	COG1457@1|root,COG1457@2|Bacteria,1UI3Y@1239|Firmicutes,4ISCI@91061|Bacilli,1ZS7D@1386|Bacillus	91061|Bacilli	F	Spore germination protein	gerKB	-	-	ko:K06296	-	-	-	-	ko00000,ko02000	2.A.3.9.3	-	-	Spore_permease
PHALIAPI_00380	224308.BSU03730	4.82e-155	436.0	COG1136@1|root,COG1136@2|Bacteria,1TP5M@1239|Firmicutes,4HD2M@91061|Bacilli,1ZPYV@1386|Bacillus	91061|Bacilli	P	ABC transporter	yclH	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_00381	224308.BSU03740	6.2e-277	766.0	COG0577@1|root,COG0577@2|Bacteria,1TPSE@1239|Firmicutes,4HCAX@91061|Bacilli,1ZBS7@1386|Bacillus	91061|Bacilli	V	ABC transporter (permease) YclI	yclI	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
PHALIAPI_00382	224308.BSU03750	6.39e-165	461.0	COG0745@1|root,COG0745@2|Bacteria,1TQUQ@1239|Firmicutes,4HAXP@91061|Bacilli,1ZD4W@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	yclJ	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_00383	224308.BSU03760	0.0	894.0	COG3850@1|root,COG5002@1|root,COG3850@2|Bacteria,COG5002@2|Bacteria,1TQ1H@1239|Firmicutes,4IS6U@91061|Bacilli,1ZS7E@1386|Bacillus	91061|Bacilli	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	yclK	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
PHALIAPI_00384	326423.RBAM_019730	2.18e-97	301.0	COG0457@1|root,COG0457@2|Bacteria,1W0TS@1239|Firmicutes,4HZ05@91061|Bacilli,1ZCCQ@1386|Bacillus	91061|Bacilli	S	aspartate phosphatase	rapA1	-	-	ko:K06359,ko:K06361	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	-	-	TPR_12,TPR_8
PHALIAPI_00386	1121090.KB894689_gene383	7.93e-06	44.7	29S6R@1|root,30DB9@2|Bacteria,1UB3Q@1239|Firmicutes,4IMGB@91061|Bacilli,1ZK3F@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (Tiny_TM_bacill)	-	-	-	-	-	-	-	-	-	-	-	-	Tiny_TM_bacill
PHALIAPI_00387	224308.BSU03790	1.8e-292	802.0	COG0527@1|root,COG0527@2|Bacteria,1TPQJ@1239|Firmicutes,4HAEP@91061|Bacilli,1ZBR5@1386|Bacillus	91061|Bacilli	E	Belongs to the aspartokinase family	lysC	GO:0000166,GO:0003674,GO:0003824,GO:0004072,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017076,GO:0019202,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU03790	AA_kinase,ACT,ACT_7
PHALIAPI_00388	224308.BSU03800	2.2e-205	570.0	COG4606@1|root,COG4606@2|Bacteria,1TSQX@1239|Firmicutes,4H9P2@91061|Bacilli,1ZB32@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	yclN	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
PHALIAPI_00389	224308.BSU03810	3.16e-209	580.0	COG4605@1|root,COG4605@2|Bacteria,1TP3V@1239|Firmicutes,4HAHE@91061|Bacilli,1ZB2F@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	yclO	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
PHALIAPI_00390	224308.BSU03820	5.63e-176	491.0	COG4604@1|root,COG4604@2|Bacteria,1UHP5@1239|Firmicutes,4HBJE@91061|Bacilli,1ZB9F@1386|Bacillus	91061|Bacilli	P	ABC transporter, ATP-binding protein	yclP	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
PHALIAPI_00391	224308.BSU03830	1.64e-212	588.0	COG4607@1|root,COG4607@2|Bacteria,1UXCZ@1239|Firmicutes,4HAMP@91061|Bacilli,1ZB26@1386|Bacillus	91061|Bacilli	P	COG4607 ABC-type enterochelin transport system, periplasmic component	yclQ	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	iYO844.BSU03830	Peripla_BP_2
PHALIAPI_00392	224308.BSU03840	0.0	872.0	COG0477@1|root,COG2814@2|Bacteria,1TPRN@1239|Firmicutes,4H9VV@91061|Bacilli,1ZAXQ@1386|Bacillus	91061|Bacilli	EGP	the major facilitator superfamily	ycnB	-	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_00393	224308.BSU03850	1.68e-197	548.0	COG1309@1|root,COG1309@2|Bacteria,1V783@1239|Firmicutes,4HIR7@91061|Bacilli,1ZFCZ@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ycnC	GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_00394	224308.BSU03860	2.12e-174	486.0	COG0778@1|root,COG0778@2|Bacteria,1UB8S@1239|Firmicutes,4HEGP@91061|Bacilli,1ZBQ3@1386|Bacillus	91061|Bacilli	C	Oxidoreductase	-	-	1.5.1.39	ko:K10678,ko:K19286	ko00633,ko00740,ko01100,ko01120,map00633,map00740,map01100,map01120	-	R05705,R05706,R08014,R08017,R08042	RC00126,RC00250	ko00000,ko00001,ko01000	-	-	-	Nitroreductase
PHALIAPI_00395	224308.BSU03870	1.68e-60	186.0	COG1359@1|root,COG1359@2|Bacteria,1VG4T@1239|Firmicutes,4HPNQ@91061|Bacilli,1ZJAH@1386|Bacillus	91061|Bacilli	S	Monooxygenase	ycnE	GO:0003674,GO:0003824	-	-	-	-	-	-	-	-	-	-	ABM
PHALIAPI_00396	224308.BSU03880	6.51e-69	208.0	COG0640@1|root,COG0640@2|Bacteria,1U4AD@1239|Firmicutes,4HZN5@91061|Bacilli,1ZQGK@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, Arsenical Resistance Operon Repressor	yczG	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_5
PHALIAPI_00397	224308.BSU03890	0.0	943.0	COG1167@1|root,COG1167@2|Bacteria,1TPS5@1239|Firmicutes,4HB2U@91061|Bacilli,1ZB5R@1386|Bacillus	91061|Bacilli	K	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	gabR	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
PHALIAPI_00398	224308.BSU03900	6.31e-309	842.0	COG0160@1|root,COG0160@2|Bacteria,1VS6F@1239|Firmicutes,4H9M7@91061|Bacilli,1ZAZ9@1386|Bacillus	91061|Bacilli	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	gabT	GO:0003674,GO:0003824,GO:0003867,GO:0008483,GO:0016740,GO:0016769	2.6.1.19,2.6.1.22	ko:K00823,ko:K07250	ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120	M00027	R00908,R01648,R04188	RC00006,RC00062,RC00160	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
PHALIAPI_00399	224308.BSU03910	0.0	919.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4H9MF@91061|Bacilli,1ZAXK@1386|Bacillus	91061|Bacilli	C	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively	gabD	GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009448,GO:0009450,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019752,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	1.2.1.16,1.2.1.20,1.2.1.79	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	M00027	R00713,R00714,R02401	RC00080	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
PHALIAPI_00400	224308.BSU03920	1.67e-190	530.0	COG4975@1|root,COG4975@2|Bacteria,1TQBN@1239|Firmicutes,4HAVH@91061|Bacilli,1ZE1R@1386|Bacillus	91061|Bacilli	U	Glucose uptake	glcU	GO:0003674,GO:0005215,GO:0005355,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0015144,GO:0015145,GO:0015149,GO:0015749,GO:0022857,GO:0034219,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:1904659	-	ko:K05340	-	-	-	-	ko00000,ko02000	2.A.7.5	-	-	Sugar_transport
PHALIAPI_00401	224308.BSU03930	2.69e-183	510.0	COG1028@1|root,COG1028@2|Bacteria,1TR5M@1239|Firmicutes,4HCD2@91061|Bacilli,1ZD11@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	gdh	-	1.1.1.47	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	-	R01520,R01521	RC00066	ko00000,ko00001,ko01000	-	-	iYO844.BSU03930	adh_short_C2
PHALIAPI_00402	224308.BSU03940	1.9e-132	377.0	COG4549@1|root,COG4549@2|Bacteria,1V509@1239|Firmicutes,4HH2V@91061|Bacilli,1ZGDU@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ycnI	-	-	-	-	-	-	-	-	-	-	-	DUF1775
PHALIAPI_00403	224308.BSU03950	0.0	1048.0	COG1276@1|root,COG2372@1|root,COG1276@2|Bacteria,COG2372@2|Bacteria,1V0AI@1239|Firmicutes,4HDZZ@91061|Bacilli,1ZEHB@1386|Bacillus	91061|Bacilli	P	protein, homolog of Cu resistance protein CopC	ycnJ	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K14166	-	-	-	-	ko00000,ko02000	-	-	-	CopC,CopD,YtkA
PHALIAPI_00404	224308.BSU03960	8.26e-136	384.0	COG1349@1|root,COG1349@2|Bacteria,1V2NI@1239|Firmicutes,4HG3I@91061|Bacilli,1ZGG8@1386|Bacillus	91061|Bacilli	K	COG1349 Transcriptional regulators of sugar metabolism	ycnK	-	-	ko:K21601	-	-	-	-	ko00000,ko03000	-	-	-	HTH_DeoR,NosL
PHALIAPI_00405	1051501.AYTL01000031_gene1485	1.34e-74	223.0	2C03Z@1|root,30154@2|Bacteria,1U8TT@1239|Firmicutes,4IIS6@91061|Bacilli,1ZKJI@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00406	224308.BSU03981	0.0	883.0	COG2213@1|root,COG2213@2|Bacteria,1TPE3@1239|Firmicutes,4HAVV@91061|Bacilli,1ZC81@1386|Bacillus	91061|Bacilli	G	COG2213 Phosphotransferase system, mannitol-specific IIBC component	mtlA	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563	2.7.1.197	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	M00274	R02704	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.2.1.12,4.A.2.1.2,4.A.2.1.24,4.A.2.1.5	-	-	PTS_EIIC,PTS_IIB
PHALIAPI_00407	224308.BSU03982	8.3e-95	276.0	COG4668@1|root,COG4668@2|Bacteria,1V77P@1239|Firmicutes,4HIM2@91061|Bacilli,1ZETZ@1386|Bacillus	91061|Bacilli	G	COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain	mtlF	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563	2.7.1.197	ko:K02798	ko00051,ko02060,map00051,map02060	M00274	R02704	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.2.1.12,4.A.2.1.2,4.A.2.1.24,4.A.2.1.5	-	-	PTS_EIIA_2
PHALIAPI_00408	224308.BSU03990	2.97e-266	729.0	COG0246@1|root,COG0246@2|Bacteria,1TPZU@1239|Firmicutes,4H9S3@91061|Bacilli,1ZD4H@1386|Bacillus	91061|Bacilli	G	COG0246 Mannitol-1-phosphate altronate dehydrogenases	mtlD	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006059,GO:0006066,GO:0008150,GO:0008152,GO:0008926,GO:0009056,GO:0009987,GO:0016052,GO:0016491,GO:0016614,GO:0016616,GO:0019400,GO:0019405,GO:0019407,GO:0019592,GO:0019594,GO:0019751,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0055114,GO:0071704,GO:1901575,GO:1901615,GO:1901616	1.1.1.17	ko:K00009	ko00051,map00051	-	R02703	RC00085	ko00000,ko00001,ko01000	-	-	-	Mannitol_dh,Mannitol_dh_C
PHALIAPI_00409	224308.BSU04000	2.05e-256	702.0	COG0473@1|root,COG0473@2|Bacteria,1TPEM@1239|Firmicutes,4HA76@91061|Bacilli,1ZB1V@1386|Bacillus	91061|Bacilli	CE	Tartrate dehydrogenase	ycsA	-	1.1.1.83,1.1.1.93,4.1.1.73	ko:K07246	ko00630,ko00650,map00630,map00650	-	R00215,R01751,R02545,R06180	RC00084,RC00105,RC00594	ko00000,ko00001,ko01000	-	-	-	Iso_dh
PHALIAPI_00411	224308.BSU04010	3.44e-94	276.0	COG0681@1|root,COG0681@2|Bacteria,1V2BJ@1239|Firmicutes,4HGCB@91061|Bacilli,1ZGNJ@1386|Bacillus	91061|Bacilli	U	Belongs to the peptidase S26 family	lepB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
PHALIAPI_00412	224308.BSU04020	9.14e-139	392.0	COG0412@1|root,COG0412@2|Bacteria,1V78Q@1239|Firmicutes,4HDAM@91061|Bacilli,1ZFXV@1386|Bacillus	91061|Bacilli	Q	COG0412 Dienelactone hydrolase and related enzymes	-	-	-	-	-	-	-	-	-	-	-	-	DLH
PHALIAPI_00413	224308.BSU04030	9.34e-88	258.0	COG0764@1|root,COG0764@2|Bacteria,1VXZP@1239|Firmicutes,4HXDJ@91061|Bacilli,1ZNA6@1386|Bacillus	91061|Bacilli	I	FabA-like domain	ycsD	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
PHALIAPI_00415	224308.BSU04040	1.9e-177	494.0	COG0561@1|root,COG0561@2|Bacteria,1TR2E@1239|Firmicutes,4HFXT@91061|Bacilli,1ZQ4E@1386|Bacillus	91061|Bacilli	S	Sucrose-6F-phosphate phosphohydrolase	ycsE	-	3.1.3.104	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R07280	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Hydrolase_3
PHALIAPI_00416	224308.BSU04050	2.12e-178	497.0	COG1540@1|root,COG1540@2|Bacteria,1TR8X@1239|Firmicutes,4H9PF@91061|Bacilli,1ZC6W@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0271 (lamB) family	ycsF	-	-	ko:K07160	-	-	-	-	ko00000	-	-	-	LamB_YcsF
PHALIAPI_00417	224308.BSU04060	1.13e-272	748.0	COG1914@1|root,COG1914@2|Bacteria,1TP0Q@1239|Firmicutes,4HAYE@91061|Bacilli,1ZC68@1386|Bacillus	91061|Bacilli	P	COG1914 Mn2 and Fe2 transporters of the NRAMP family	ycsG	-	-	-	-	-	-	-	-	-	-	-	Nramp
PHALIAPI_00418	224308.BSU04070	7e-190	526.0	COG4336@1|root,COG4336@2|Bacteria,1TRY8@1239|Firmicutes,4HCWD@91061|Bacilli,1ZB87@1386|Bacillus	91061|Bacilli	S	Belongs to the D-glutamate cyclase family	ycsI	-	-	-	-	-	-	-	-	-	-	-	DUF1445
PHALIAPI_00419	224308.BSU04080	1.97e-170	476.0	COG2049@1|root,COG2049@2|Bacteria,1TTBZ@1239|Firmicutes,4HHJJ@91061|Bacilli,1ZDVS@1386|Bacillus	91061|Bacilli	E	Allophanate hydrolase subunit 1	kipI	-	-	ko:K06351	-	-	-	-	ko00000	-	-	-	CT_C_D
PHALIAPI_00420	224308.BSU04090	1.99e-238	655.0	COG1984@1|root,COG1984@2|Bacteria,1TR6U@1239|Firmicutes,4HACC@91061|Bacilli,1ZCFE@1386|Bacillus	91061|Bacilli	E	Allophanate hydrolase subunit 2	kipA	-	-	ko:K06350	-	-	-	-	ko00000	-	-	-	CT_A_B
PHALIAPI_00421	224308.BSU04100	3.64e-169	473.0	COG1414@1|root,COG1414@2|Bacteria,1TQS2@1239|Firmicutes,4HBYR@91061|Bacilli,1ZDMV@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	kipR	GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
PHALIAPI_00422	224308.BSU04110	9.02e-148	416.0	COG2755@1|root,COG2755@2|Bacteria,1VAXZ@1239|Firmicutes,4HNDB@91061|Bacilli,1ZETN@1386|Bacillus	91061|Bacilli	E	anatomical structure formation involved in morphogenesis	ycsK	GO:0006629,GO:0008150,GO:0008152,GO:0009056,GO:0016042,GO:0044238,GO:0071704,GO:1901575	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
PHALIAPI_00424	224308.BSU04130	7.67e-66	199.0	COG2329@1|root,COG2329@2|Bacteria,1VCZF@1239|Firmicutes,4HMH1@91061|Bacilli,1ZH5C@1386|Bacillus	91061|Bacilli	S	biosynthesis	yczJ	-	-	-	-	-	-	-	-	-	-	-	ABM
PHALIAPI_00425	224308.BSU04140	0.0	1313.0	COG0768@1|root,COG0768@2|Bacteria,1TQHY@1239|Firmicutes,4H9MT@91061|Bacilli,1ZAX9@1386|Bacillus	91061|Bacilli	M	Penicillin-binding Protein	pbpC	-	3.4.16.4	ko:K02545,ko:K21467	ko00550,ko01100,ko01501,map00550,map01100,map01501	M00625	-	-	ko00000,ko00001,ko00002,ko01000,ko01011,ko01504	-	-	-	MecA_N,PBP_dimer,Transpeptidase
PHALIAPI_00426	224308.BSU04150	4.09e-218	601.0	COG4989@1|root,COG4989@2|Bacteria,1TQ12@1239|Firmicutes,4HA57@91061|Bacilli,1ZD8D@1386|Bacillus	91061|Bacilli	S	Oxidoreductase	ycsN	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
PHALIAPI_00427	224308.BSU04160	0.0	1296.0	COG3711@1|root,COG3711@2|Bacteria,1TQT1@1239|Firmicutes,4HABH@91061|Bacilli,1ZBYI@1386|Bacillus	91061|Bacilli	K	transcriptional regulator, MtlR	mtlR	-	-	ko:K03483	-	-	-	-	ko00000,ko03000	-	-	-	HTH_11,Mga,PRD,PTS_EIIA_2,PTS_IIB
PHALIAPI_00428	224308.BSU04170	0.0	997.0	COG0318@1|root,COG0318@2|Bacteria,1TPSX@1239|Firmicutes,4HACS@91061|Bacilli,1ZEIH@1386|Bacillus	91061|Bacilli	IQ	acyl-CoA ligase	ydaB	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
PHALIAPI_00429	224308.BSU04180	1.43e-127	363.0	COG0500@1|root,COG2226@2|Bacteria,1V9BF@1239|Firmicutes,4HK9K@91061|Bacilli,1ZGGF@1386|Bacillus	91061|Bacilli	Q	Methyltransferase domain	ydaC	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
PHALIAPI_00430	224308.BSU04190	6.21e-206	569.0	COG1028@1|root,COG1028@2|Bacteria,1TR53@1239|Firmicutes,4HB8Y@91061|Bacilli,1ZAS0@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	ydaD	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
PHALIAPI_00431	224308.BSU04200	5.56e-125	355.0	COG1917@1|root,COG1917@2|Bacteria,1UI65@1239|Firmicutes,4ISF6@91061|Bacilli,1ZGCF@1386|Bacillus	91061|Bacilli	S	Cupin 2, conserved barrel domain protein	ydaE	-	5.3.1.15	ko:K09988	ko00040,map00040	-	R01898	RC00516	ko00000,ko00001,ko01000	-	-	-	Lyx_isomer
PHALIAPI_00432	224308.BSU04210	4.44e-123	351.0	COG1670@1|root,COG1670@2|Bacteria,1V3NE@1239|Firmicutes,4HG1N@91061|Bacilli,1ZEC8@1386|Bacillus	91061|Bacilli	J	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins	ydaF	GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008999,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017198,GO:0018193,GO:0018209,GO:0019538,GO:0030920,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1990189	-	ko:K03817	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
PHALIAPI_00433	224308.BSU04220	4.32e-100	290.0	COG3871@1|root,COG3871@2|Bacteria,1V6MX@1239|Firmicutes,4HIYZ@91061|Bacilli,1ZH2Z@1386|Bacillus	91061|Bacilli	S	general stress protein	ydaG	-	-	-	-	-	-	-	-	-	-	-	Putative_PNPOx,Pyrid_ox_like
PHALIAPI_00434	224308.BSU04230	1.31e-178	499.0	28NMK@1|root,2ZBN3@2|Bacteria,1TT4K@1239|Firmicutes,4HBFT@91061|Bacilli,1ZCHB@1386|Bacillus	91061|Bacilli	U	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane	amj	-	-	-	-	-	-	-	-	-	-	-	Amj
PHALIAPI_00435	224308.BSU04240	3.12e-61	188.0	COG0477@1|root,COG2814@2|Bacteria,1VGN4@1239|Firmicutes,4HNVP@91061|Bacilli,1ZIWN@1386|Bacillus	91061|Bacilli	EGP	Domain of unknown function (DUF3817)	ydzA	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	DUF3817
PHALIAPI_00436	224308.BSU04250	3.95e-98	285.0	COG1522@1|root,COG1522@2|Bacteria,1V93E@1239|Firmicutes,4IS27@91061|Bacilli,1ZS0N@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	lrpC	GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0043200,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2001141	-	ko:K03719	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
PHALIAPI_00437	224308.BSU04260	0.0	1420.0	COG0550@1|root,COG0551@1|root,COG0550@2|Bacteria,COG0551@2|Bacteria,1TPJD@1239|Firmicutes,4HAZV@91061|Bacilli,1ZBEG@1386|Bacillus	91061|Bacilli	L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone	topB	-	5.99.1.2	ko:K03169	-	-	-	-	ko00000,ko01000,ko03032	-	-	-	Topoisom_bac,Toprim
PHALIAPI_00438	224308.BSU04270	9.49e-262	717.0	COG3405@1|root,COG3405@2|Bacteria,1V4ZT@1239|Firmicutes,4HG8R@91061|Bacilli,1ZR17@1386|Bacillus	91061|Bacilli	M	Belongs to the glycosyl hydrolase 8 (cellulase D) family	ydaJ	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_8
PHALIAPI_00439	224308.BSU04280	1.49e-191	533.0	COG2199@1|root,COG3706@2|Bacteria,1VHAN@1239|Firmicutes,4HQWC@91061|Bacilli,1ZFFR@1386|Bacillus	91061|Bacilli	T	Diguanylate cyclase, GGDEF domain	ydaK	-	-	-	-	-	-	-	-	-	-	-	GGDEF
PHALIAPI_00440	224308.BSU04290	0.0	1102.0	COG5298@1|root,COG5298@2|Bacteria,1TSDC@1239|Firmicutes,4HD1Q@91061|Bacilli,1ZDYW@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein conserved in bacteria (DUF2334)	ydaL	-	-	-	-	-	-	-	-	-	-	-	DUF2334
PHALIAPI_00441	224308.BSU04300	1.93e-304	830.0	COG1215@1|root,COG1215@2|Bacteria,1TRCI@1239|Firmicutes,4HAAK@91061|Bacilli,1ZE8G@1386|Bacillus	91061|Bacilli	M	Glycosyl transferase family group 2	ydaM	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3
PHALIAPI_00442	224308.BSU04310	0.0	1319.0	28HGC@1|root,2Z7S8@2|Bacteria,1V3ZA@1239|Firmicutes,4IRWX@91061|Bacilli,1ZFHW@1386|Bacillus	91061|Bacilli	S	Bacterial cellulose synthase subunit	ydaN	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	BcsB
PHALIAPI_00443	224308.BSU04320	0.0	1148.0	COG0531@1|root,COG0531@2|Bacteria,1TQE1@1239|Firmicutes,4HAZH@91061|Bacilli,1ZC7Q@1386|Bacillus	91061|Bacilli	E	amino acid	ydaO	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039	-	-	-	-	-	-	-	-	-	-	AA_permease_2
PHALIAPI_00444	224308.BSU04330	6.23e-100	290.0	COG0494@1|root,COG0494@2|Bacteria,1VQCD@1239|Firmicutes,4IPY2@91061|Bacilli,1ZHWQ@1386|Bacillus	91061|Bacilli	L	Belongs to the Nudix hydrolase family	mutT	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NUDIX
PHALIAPI_00445	224308.BSU04340	0.0	1139.0	COG0028@1|root,COG0028@2|Bacteria,1TQE8@1239|Firmicutes,4HBUS@91061|Bacilli,1ZB01@1386|Bacillus	91061|Bacilli	EH	Belongs to the TPP enzyme family	ydaP	-	1.2.3.3	ko:K00158	ko00620,ko01100,map00620,map01100	-	R00207	RC02745	ko00000,ko00001,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
PHALIAPI_00446	224308.BSU04359	2.14e-53	167.0	29RT2@1|root,30CWY@2|Bacteria,1UAHA@1239|Firmicutes,4IKVS@91061|Bacilli,1ZHYE@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00447	224308.BSU04360	5.54e-286	783.0	COG1914@1|root,COG1914@2|Bacteria,1TPT1@1239|Firmicutes,4HAEA@91061|Bacilli,1ZCHH@1386|Bacillus	91061|Bacilli	P	H( )-stimulated, divalent metal cation uptake system	mntH	-	-	ko:K03322	-	-	-	-	ko00000,ko02000	2.A.55.2.6,2.A.55.3	-	iYO844.BSU04360	Nramp
PHALIAPI_00448	224308.BSU04370	1.67e-42	140.0	COG2261@1|root,COG2261@2|Bacteria,1VENK@1239|Firmicutes,4HNKV@91061|Bacilli,1ZJBG@1386|Bacillus	91061|Bacilli	S	membrane	ydaS	-	-	-	-	-	-	-	-	-	-	-	Transgly_assoc
PHALIAPI_00449	224308.BSU04380	3.73e-99	288.0	COG4876@1|root,COG4876@2|Bacteria,1V946@1239|Firmicutes,4IRQ3@91061|Bacilli,1ZRWN@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein conserved in bacteria (DUF2188)	ydaT	-	-	-	-	-	-	-	-	-	-	-	DUF2188
PHALIAPI_00450	224308.BSU04390	2.05e-188	524.0	COG2217@1|root,COG2217@2|Bacteria,1UHSD@1239|Firmicutes,4IS9K@91061|Bacilli,1ZS3Q@1386|Bacillus	91061|Bacilli	P	EcsC protein family	ydbA	-	-	-	-	-	-	-	-	-	-	-	EcsC
PHALIAPI_00451	224308.BSU04400	3.3e-10	60.8	COG3729@1|root,COG3729@2|Bacteria,1V71P@1239|Firmicutes,4HJ8A@91061|Bacilli,1ZGZA@1386|Bacillus	91061|Bacilli	S	general stress protein	gsiB	-	-	ko:K06884	-	-	-	-	ko00000	-	-	-	KGG,LEA_5
PHALIAPI_00452	224308.BSU04410	1.07e-75	226.0	COG0662@1|root,COG0662@2|Bacteria,1VI5Z@1239|Firmicutes,4HSX4@91061|Bacilli,1ZGZ3@1386|Bacillus	91061|Bacilli	G	Cupin domain	ydbB	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
PHALIAPI_00453	224308.BSU04420	8.65e-81	239.0	COG2329@1|root,COG2329@2|Bacteria,1VHZ1@1239|Firmicutes,4HP36@91061|Bacilli,1ZHXX@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF4937	ydbC	-	-	-	-	-	-	-	-	-	-	-	ABM,Cupin_2,DUF4937
PHALIAPI_00454	224308.BSU04430	9.11e-197	545.0	COG3546@1|root,COG3546@2|Bacteria,1TQVQ@1239|Firmicutes,4H9XR@91061|Bacilli,1ZBZ9@1386|Bacillus	91061|Bacilli	P	Catalase	ydbD	GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716	-	ko:K07217	-	-	-	-	ko00000	-	-	-	Mn_catalase
PHALIAPI_00455	224308.BSU04440	6.07e-252	691.0	COG1638@1|root,COG1638@2|Bacteria,1TP3I@1239|Firmicutes,4HD0U@91061|Bacilli,1ZCY6@1386|Bacillus	91061|Bacilli	G	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component	dctB	-	-	-	-	-	-	-	-	-	-	-	DctP
PHALIAPI_00456	224308.BSU04450	0.0	1021.0	COG3290@1|root,COG3290@2|Bacteria,1TQJR@1239|Firmicutes,4H9Q0@91061|Bacilli,1ZBHV@1386|Bacillus	91061|Bacilli	T	Signal transduction histidine kinase regulating citrate malate metabolism	dctS	-	2.7.13.3	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	M00487,M00489,M00490	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HATPase_c_5,PAS,PAS_10,PAS_8,PAS_9,SPOB_a,sCache_3_2
PHALIAPI_00457	224308.BSU04460	2.79e-154	434.0	COG4565@1|root,COG4565@2|Bacteria,1V49R@1239|Firmicutes,4HHD4@91061|Bacilli,1ZDGY@1386|Bacillus	91061|Bacilli	T	COG4565 Response regulator of citrate malate metabolism	dctR	-	-	ko:K02475,ko:K11692	ko02020,map02020	M00489	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	FaeA,HTH_11,HTH_DeoR,HTH_IclR,Response_reg
PHALIAPI_00458	224308.BSU04470	8.93e-290	793.0	COG1301@1|root,COG1301@2|Bacteria,1TPME@1239|Firmicutes,4H9T7@91061|Bacilli,1ZBKK@1386|Bacillus	91061|Bacilli	U	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	dctA	-	-	ko:K03309,ko:K11102,ko:K11103	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.23,2.A.23.1.1,2.A.23.1.2,2.A.23.1.3,2.A.23.1.6,2.A.23.1.7	-	iYO844.BSU10220	SDF
PHALIAPI_00459	224308.BSU04480	3.25e-231	639.0	COG0628@1|root,COG0628@2|Bacteria,1TSBK@1239|Firmicutes,4HBYJ@91061|Bacilli,1ZBJD@1386|Bacillus	91061|Bacilli	S	AI-2E family transporter	ydbI	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
PHALIAPI_00460	224308.BSU04490	1.08e-217	601.0	COG1131@1|root,COG1131@2|Bacteria,1TP4J@1239|Firmicutes,4HBGH@91061|Bacilli,1ZB4N@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	ydbJ	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_00461	224308.BSU04500	1.22e-158	447.0	COG1277@1|root,COG1277@2|Bacteria,1TT9E@1239|Firmicutes,4HE5W@91061|Bacilli,1ZDPM@1386|Bacillus	91061|Bacilli	S	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component	ydbK	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC2_membrane_4
PHALIAPI_00462	224308.BSU04510	9.32e-70	211.0	29RJA@1|root,30CND@2|Bacteria,1UA4S@1239|Firmicutes,4IKF0@91061|Bacilli,1ZGT1@1386|Bacillus	91061|Bacilli	-	-	ydbL	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00463	224308.BSU04520	3.54e-278	760.0	COG1960@1|root,COG1960@2|Bacteria,1TP57@1239|Firmicutes,4HBTP@91061|Bacilli,1ZATT@1386|Bacillus	91061|Bacilli	I	acyl-CoA dehydrogenase	ydbM	-	-	-	-	-	-	-	-	-	-	iYO844.BSU04520	Acyl-CoA_dh_1,Acyl-CoA_dh_2,Acyl-CoA_dh_M,Acyl-CoA_dh_N
PHALIAPI_00464	224308.BSU04530	8.64e-26	95.5	29SEI@1|root,30DJB@2|Bacteria,1UBCP@1239|Firmicutes,4IMRH@91061|Bacilli,1ZKP6@1386|Bacillus	91061|Bacilli	S	Fur-regulated basic protein B	-	-	-	-	-	-	-	-	-	-	-	-	Fur_reg_FbpB
PHALIAPI_00465	279010.BL05040	2.1e-11	59.3	29S5B@1|root,30D9U@2|Bacteria,1UB1P@1239|Firmicutes,4IMEJ@91061|Bacilli,1ZJZ0@1386|Bacillus	91061|Bacilli	S	Fur-regulated basic protein A	-	-	-	-	-	-	-	-	-	-	-	-	Fur_reg_FbpA
PHALIAPI_00466	224308.BSU04540	4.5e-201	557.0	COG0053@1|root,COG0053@2|Bacteria,1TSGY@1239|Firmicutes,4H9WP@91061|Bacilli,1ZAPN@1386|Bacillus	91061|Bacilli	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	yeaB	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
PHALIAPI_00467	224308.BSU04550	4.19e-75	224.0	COG0526@1|root,COG0526@2|Bacteria,1VA84@1239|Firmicutes,4HKCD@91061|Bacilli,1ZHXM@1386|Bacillus	91061|Bacilli	CO	Thioredoxin	ydbP	GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748	-	-	-	-	-	-	-	-	-	-	Thioredoxin
PHALIAPI_00468	224308.BSU04560	3.58e-257	705.0	COG1181@1|root,COG1181@2|Bacteria,1TP2Y@1239|Firmicutes,4H9KB@91061|Bacilli,1ZDA3@1386|Bacillus	91061|Bacilli	F	Belongs to the D-alanine--D-alanine ligase family	ddl	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N
PHALIAPI_00469	224308.BSU04570	0.0	879.0	COG0770@1|root,COG0770@2|Bacteria,1VT78@1239|Firmicutes,4HACR@91061|Bacilli,1ZCC3@1386|Bacillus	91061|Bacilli	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
PHALIAPI_00470	224308.BSU04580	0.0	920.0	COG0513@1|root,COG0513@2|Bacteria,1TPAP@1239|Firmicutes,4HAB3@91061|Bacilli,1ZAPP@1386|Bacillus	91061|Bacilli	JKL	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity	cshA	GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363	3.6.4.13	ko:K05592	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019	-	-	-	DEAD,Helicase_C
PHALIAPI_00471	224308.BSU04590	7.1e-106	306.0	COG3402@1|root,COG3402@2|Bacteria,1VFTS@1239|Firmicutes,4HPTD@91061|Bacilli,1ZQR1@1386|Bacillus	91061|Bacilli	S	Bacterial PH domain	ydbS	-	-	ko:K09167	-	-	-	-	ko00000	-	-	-	bPH_2
PHALIAPI_00472	224308.BSU04600	0.0	927.0	COG3428@1|root,COG3428@2|Bacteria,1TSRJ@1239|Firmicutes,4HB8P@91061|Bacilli,1ZBIF@1386|Bacillus	91061|Bacilli	S	Membrane	ydbT	-	-	ko:K08981	-	-	-	-	ko00000	-	-	-	bPH_2
PHALIAPI_00473	224308.BSU04610	2.08e-138	391.0	COG0705@1|root,COG0705@2|Bacteria,1TQXT@1239|Firmicutes,4HCDF@91061|Bacilli,1ZCEK@1386|Bacillus	91061|Bacilli	S	membrane protein (homolog of Drosophila rhomboid)	ydcA	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
PHALIAPI_00474	224308.BSU04620	1.6e-77	231.0	COG0736@1|root,COG0736@2|Bacteria,1VA0T@1239|Firmicutes,4HKBI@91061|Bacilli,1ZI02@1386|Bacillus	91061|Bacilli	I	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein	acpS	-	2.7.8.7	ko:K00997	ko00770,map00770	-	R01625	RC00002	ko00000,ko00001,ko01000	-	-	iYO844.BSU04620	ACPS
PHALIAPI_00475	224308.BSU04630	9.41e-234	645.0	COG2834@1|root,COG2834@2|Bacteria,1TSRE@1239|Firmicutes,4HBCH@91061|Bacilli,1ZBE6@1386|Bacillus	91061|Bacilli	M	COG2834 Outer membrane lipoprotein-sorting protein	ydcC	-	-	-	-	-	-	-	-	-	-	-	DUF4367
PHALIAPI_00476	224308.BSU04640	1.19e-280	767.0	COG0787@1|root,COG0787@2|Bacteria,1TNYY@1239|Firmicutes,4HA95@91061|Bacilli,1ZCW9@1386|Bacillus	91061|Bacilli	E	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids	alr	-	5.1.1.1,5.1.1.5	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	-	R00401	RC00285	ko00000,ko00001,ko01000,ko01011	-	-	-	Ala_racemase_C,Ala_racemase_N
PHALIAPI_00477	224308.BSU04650	9.49e-57	176.0	COG0864@1|root,COG0864@2|Bacteria,1VA28@1239|Firmicutes,4HKPU@91061|Bacilli,1ZGYI@1386|Bacillus	91061|Bacilli	K	transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain	ndoAI	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K07723	-	-	-	-	ko00000,ko02048,ko03000	-	-	-	RHH_1
PHALIAPI_00478	224308.BSU04660	4.34e-75	224.0	COG2337@1|root,COG2337@2|Bacteria,1V6DK@1239|Firmicutes,4HGXF@91061|Bacilli,1ZG8R@1386|Bacillus	91061|Bacilli	L	Toxic component of a toxin-antitoxin (TA) module	ndoA	-	-	ko:K07171	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	PemK_toxin
PHALIAPI_00479	224308.BSU04670	8.58e-184	512.0	COG1366@1|root,COG1366@2|Bacteria,1UGQT@1239|Firmicutes,4HCRH@91061|Bacilli,1ZBRY@1386|Bacillus	91061|Bacilli	T	Positive regulator of sigma-B	rsbR	-	-	ko:K17763	-	-	-	-	ko00000,ko03021	-	-	-	Rsbr_N,STAS
PHALIAPI_00480	224308.BSU04680	1.8e-74	223.0	COG1366@1|root,COG1366@2|Bacteria,1V7FB@1239|Firmicutes,4HIQ6@91061|Bacilli,1ZGH2@1386|Bacillus	91061|Bacilli	T	antagonist	rsbS	-	-	ko:K17762	-	-	-	-	ko00000,ko03021	-	-	-	STAS
PHALIAPI_00481	224308.BSU04690	8.56e-90	263.0	COG2172@1|root,COG2172@2|Bacteria,1V6Y4@1239|Firmicutes,4HIQU@91061|Bacilli,1ZG7T@1386|Bacillus	91061|Bacilli	T	COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)	rsbT	-	2.7.11.1	ko:K17752	-	-	-	-	ko00000,ko01000,ko01001,ko03021	-	-	-	HATPase_c,HATPase_c_2
PHALIAPI_00482	224308.BSU04700	1.31e-243	669.0	COG2208@1|root,COG2208@2|Bacteria,1TQY5@1239|Firmicutes,4HAF6@91061|Bacilli,1ZBIB@1386|Bacillus	91061|Bacilli	KT	phosphatase	rsbU	-	3.1.3.3	ko:K07315	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	RsbU_N,SpoIIE
PHALIAPI_00483	224308.BSU04710	1.97e-70	212.0	COG1366@1|root,COG1366@2|Bacteria,1VER8@1239|Firmicutes,4HP2I@91061|Bacilli,1ZIDN@1386|Bacillus	91061|Bacilli	T	Belongs to the anti-sigma-factor antagonist family	rsbV	-	-	ko:K04749	-	-	-	-	ko00000,ko03021	-	-	-	STAS,STAS_2
PHALIAPI_00484	224308.BSU04720	2.48e-111	320.0	COG2172@1|root,COG2172@2|Bacteria,1V1IA@1239|Firmicutes,4HM6Z@91061|Bacilli,1ZQQZ@1386|Bacillus	91061|Bacilli	F	Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)	rsbW	GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141	2.7.11.1	ko:K04757	-	-	-	-	ko00000,ko01000,ko01001,ko03021	-	-	-	HATPase_c_2
PHALIAPI_00485	224308.BSU04730	3.12e-178	497.0	COG1191@1|root,COG1191@2|Bacteria,1TP3Q@1239|Firmicutes,4HBIW@91061|Bacilli,1ZBAP@1386|Bacillus	91061|Bacilli	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	sigB	GO:0000988,GO:0000990,GO:0003674,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0043620,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141	-	ko:K03090	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r3,Sigma70_r4
PHALIAPI_00486	224308.BSU04740	2.17e-140	396.0	COG2208@1|root,COG2208@2|Bacteria,1V0BN@1239|Firmicutes,4HECS@91061|Bacilli,1ZEVQ@1386|Bacillus	91061|Bacilli	KT	Sigma factor PP2C-like phosphatases	rsbX	GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896	3.1.3.3	ko:K05518	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	PP2C_2,SpoIIE
PHALIAPI_00488	224308.BSU04760	1.32e-106	306.0	COG1673@1|root,COG1673@2|Bacteria,1VAXR@1239|Firmicutes,4HKYH@91061|Bacilli,1ZGHM@1386|Bacillus	91061|Bacilli	S	EVE domain	ydcG	-	-	-	-	-	-	-	-	-	-	-	EVE
PHALIAPI_00489	224308.BSU04770	1.48e-99	289.0	COG1846@1|root,COG1846@2|Bacteria,1VCDY@1239|Firmicutes,4HM32@91061|Bacilli,1ZN3E@1386|Bacillus	91061|Bacilli	K	helix_turn_helix multiple antibiotic resistance protein	-	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_00490	224308.BSU04780	0.0	1353.0	COG2183@1|root,COG2183@2|Bacteria,1TPFE@1239|Firmicutes,4HAGY@91061|Bacilli,1ZC3T@1386|Bacillus	91061|Bacilli	K	COG2183 Transcriptional accessory protein	tex	-	-	ko:K06959	-	-	-	-	ko00000	-	-	-	HHH_3,S1,Tex_N,Tex_YqgF
PHALIAPI_00491	224308.BSU04790	3.74e-108	311.0	COG3091@1|root,COG3091@2|Bacteria,1V6NU@1239|Firmicutes,4HIHY@91061|Bacilli,1ZG8Y@1386|Bacillus	91061|Bacilli	S	Belongs to the SprT family	ydcK	-	-	ko:K03095	-	-	-	-	ko00000	-	-	-	SprT-like,Zn_ribbon_SprT
PHALIAPI_00502	714961.BFZC1_19230	1.72e-187	568.0	COG0515@1|root,COG4403@1|root,COG0515@2|Bacteria,COG4403@2|Bacteria,1TSH3@1239|Firmicutes,4HGIJ@91061|Bacilli	91061|Bacilli	KLT	Protein kinase domain	-	-	-	-	-	-	-	-	-	-	-	-	LANC_like,Pkinase
PHALIAPI_00509	714961.BFZC1_19230	5.14e-268	773.0	COG0515@1|root,COG4403@1|root,COG0515@2|Bacteria,COG4403@2|Bacteria,1TSH3@1239|Firmicutes,4HGIJ@91061|Bacilli	91061|Bacilli	KLT	Protein kinase domain	-	-	-	-	-	-	-	-	-	-	-	-	LANC_like,Pkinase
PHALIAPI_00510	1159488.SEQMU2_00930	1.57e-258	726.0	COG1132@1|root,COG1132@2|Bacteria,1TSY4@1239|Firmicutes,4HAJQ@91061|Bacilli,4GWZ8@90964|Staphylococcaceae	91061|Bacilli	V	ABC transporter	abcA	-	3.6.3.44	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	M00700	-	-	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	3.A.1.106,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.123,3.A.1.21	-	-	ABC_membrane,ABC_tran
PHALIAPI_00511	720555.BATR1942_00170	8.6e-61	189.0	2E0VF@1|root,32WCQ@2|Bacteria,1VASP@1239|Firmicutes,4HKEM@91061|Bacilli,1ZJHA@1386|Bacillus	91061|Bacilli	-	-	ydeH	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00512	264198.Reut_B4316	9.03e-14	67.0	COG0346@1|root,COG0346@2|Bacteria,1N116@1224|Proteobacteria,2VRA3@28216|Betaproteobacteria	28216|Betaproteobacteria	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	-	-	-	ko:K07032	-	-	-	-	ko00000	-	-	-	Glyoxalase
PHALIAPI_00513	279010.BL02691	7.34e-45	145.0	COG1476@1|root,COG1476@2|Bacteria,1VC4J@1239|Firmicutes,4HM8Y@91061|Bacilli,1ZIRS@1386|Bacillus	91061|Bacilli	K	Helix-turn-helix XRE-family like proteins	-	-	-	ko:K07729	-	-	-	-	ko00000,ko03000	-	-	-	HTH_3
PHALIAPI_00514	1121929.KB898665_gene2938	1.72e-52	167.0	2BE62@1|root,327WX@2|Bacteria,1V6C3@1239|Firmicutes,4HIWM@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00515	720555.BATR1942_00140	1.42e-246	677.0	COG3239@1|root,COG3239@2|Bacteria,1TP3B@1239|Firmicutes,4H9TS@91061|Bacilli,1ZAYJ@1386|Bacillus	91061|Bacilli	I	fatty acid desaturase	des	-	1.14.19.23,1.14.19.45	ko:K10255	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
PHALIAPI_00516	224308.BSU05120	4.22e-41	135.0	COG1278@1|root,COG1278@2|Bacteria,1VEE0@1239|Firmicutes,4HNJC@91061|Bacilli,1ZHSU@1386|Bacillus	91061|Bacilli	K	Cold shock	cspL	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
PHALIAPI_00517	224308.BSU05130	8.42e-102	295.0	COG1329@1|root,COG1329@2|Bacteria,1V40K@1239|Firmicutes,4HI9J@91061|Bacilli,1ZG97@1386|Bacillus	91061|Bacilli	K	Transcription factor	ydeB	-	-	ko:K07736	-	-	-	-	ko00000,ko03000	-	-	-	CarD_CdnL_TRCF
PHALIAPI_00518	224308.BSU05150	1.12e-207	574.0	COG1917@1|root,COG2207@1|root,COG1917@2|Bacteria,COG2207@2|Bacteria,1UYFB@1239|Firmicutes,4IPW9@91061|Bacilli,1ZREI@1386|Bacillus	91061|Bacilli	K	AraC-like ligand binding domain	-	GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	AraC_binding,Cupin_2,HTH_18
PHALIAPI_00519	224308.BSU05160	5.97e-216	597.0	COG0697@1|root,COG0697@2|Bacteria,1TR6G@1239|Firmicutes,4HAMD@91061|Bacilli,1ZCQ3@1386|Bacillus	91061|Bacilli	EG	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily	ydeD	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_00520	224308.BSU05170	2.64e-209	578.0	COG2207@1|root,COG3708@1|root,COG2207@2|Bacteria,COG3708@2|Bacteria,1TPI9@1239|Firmicutes,4HCJ8@91061|Bacilli,1ZAUV@1386|Bacillus	91061|Bacilli	K	AraC family transcriptional regulator	ydeE	GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009438,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019243,GO:0019249,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0051596,GO:0061727,GO:0071704,GO:0072330,GO:1901575,GO:1901576,GO:1901615,GO:1901617	-	ko:K13653	-	-	-	-	ko00000,ko03000	-	-	-	GyrI-like,HTH_18
PHALIAPI_00521	224308.BSU05180	0.0	881.0	COG1167@1|root,COG1167@2|Bacteria,1TPS5@1239|Firmicutes,4HD5A@91061|Bacilli,1ZD2Q@1386|Bacillus	91061|Bacilli	K	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2,GntR
PHALIAPI_00522	224308.BSU05190	2.31e-268	739.0	COG0477@1|root,COG0477@2|Bacteria,1UHS2@1239|Firmicutes,4IS7X@91061|Bacilli,1ZC9K@1386|Bacillus	91061|Bacilli	EGP	Major facilitator superfamily	ydeG	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr,TRI12
PHALIAPI_00523	224308.BSU05200	3.74e-69	211.0	2E0VF@1|root,32WCQ@2|Bacteria,1VASP@1239|Firmicutes,4HKEM@91061|Bacilli,1ZJHA@1386|Bacillus	91061|Bacilli	-	-	ydeH	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00524	224308.BSU05210	9.93e-136	384.0	COG4430@1|root,COG4430@2|Bacteria,1UYP9@1239|Firmicutes,4HDZD@91061|Bacilli,1ZDB7@1386|Bacillus	91061|Bacilli	S	Bacteriocin-protection, YdeI or OmpD-Associated	ydeI	-	-	-	-	-	-	-	-	-	-	-	DUF1801,OmdA
PHALIAPI_00525	224308.BSU05220	7.04e-140	397.0	291NR@1|root,2ZP8Y@2|Bacteria,1V43E@1239|Firmicutes,4HHQD@91061|Bacilli,1ZH81@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00526	224308.BSU05230	7.4e-194	539.0	COG0697@1|root,COG0697@2|Bacteria,1VQY5@1239|Firmicutes,4HTD3@91061|Bacilli,1ZDUK@1386|Bacillus	91061|Bacilli	EG	-transporter	ydeK	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_00527	224308.BSU05240	0.0	940.0	COG1167@1|root,COG1167@2|Bacteria,1TPS5@1239|Firmicutes,4HB2U@91061|Bacilli,1ZB5R@1386|Bacillus	91061|Bacilli	K	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	ydeL	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
PHALIAPI_00528	224308.BSU05250	3.68e-97	282.0	COG2030@1|root,COG2030@2|Bacteria,1VFE5@1239|Firmicutes,4HHCB@91061|Bacilli,1ZHGT@1386|Bacillus	91061|Bacilli	I	N-terminal half of MaoC dehydratase	ydeM1	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
PHALIAPI_00529	224308.BSU05260	5.36e-132	374.0	COG3545@1|root,COG3545@2|Bacteria,1V6R4@1239|Firmicutes,4HVF4@91061|Bacilli	91061|Bacilli	S	Serine hydrolase	-	-	-	ko:K07002	-	-	-	-	ko00000	-	-	-	Ser_hydrolase
PHALIAPI_00530	224308.BSU05270	7.15e-73	218.0	COG1733@1|root,COG1733@2|Bacteria,1VA9M@1239|Firmicutes,4HNAK@91061|Bacilli	91061|Bacilli	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
PHALIAPI_00531	224308.BSU05280	1.48e-190	531.0	COG1284@1|root,COG1284@2|Bacteria,1TQTP@1239|Firmicutes,4HBV2@91061|Bacilli,1ZCF3@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein conserved in bacteria (DUF2179)	ydeO	-	-	-	-	-	-	-	-	-	-	-	DUF2179,YitT_membrane
PHALIAPI_00532	224308.BSU05290	5.03e-91	266.0	COG1733@1|root,COG1733@2|Bacteria,1VA9M@1239|Firmicutes,4HH0A@91061|Bacilli,1ZHCV@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ydeP	-	-	-	-	-	-	-	-	-	-	-	HxlR
PHALIAPI_00533	224308.BSU05300	4.07e-144	405.0	COG2249@1|root,COG2249@2|Bacteria,1V4UF@1239|Firmicutes,4HH6R@91061|Bacilli,1ZGJ6@1386|Bacillus	91061|Bacilli	S	NADPH-quinone reductase (modulator of drug activity B)	ywrO	-	-	ko:K11748	-	-	-	-	ko00000,ko02000	2.A.37.1.2	-	-	Flavodoxin_2
PHALIAPI_00534	224308.BSU05310	1.08e-254	702.0	COG0477@1|root,COG2814@2|Bacteria,1TS0E@1239|Firmicutes,4HE0M@91061|Bacilli,1ZF75@1386|Bacillus	91061|Bacilli	EGP	Uncharacterised MFS-type transporter YbfB	ydeR	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
PHALIAPI_00535	224308.BSU05320	2.16e-135	384.0	COG1309@1|root,COG1309@2|Bacteria,1VG7Z@1239|Firmicutes,4IRRY@91061|Bacilli,1ZRXB@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ydeS	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_C_11,TetR_N
PHALIAPI_00537	224308.BSU05330	1.05e-75	226.0	COG0640@1|root,COG0640@2|Bacteria,1VEER@1239|Firmicutes,4HM9M@91061|Bacilli,1ZHC7@1386|Bacillus	91061|Bacilli	K	transcriptional	arsR	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	ko:K03892,ko:K22043	-	-	-	-	ko00000,ko03000	-	-	-	HTH_5
PHALIAPI_00538	224308.BSU05340	5.02e-294	805.0	COG1055@1|root,COG1055@2|Bacteria,1TPNN@1239|Firmicutes,4H9WV@91061|Bacilli,1ZBHC@1386|Bacillus	91061|Bacilli	P	Involved in arsenical resistance. Thought to form the channel of an arsenite pump	arsB	-	-	ko:K03893	-	-	-	-	ko00000,ko02000	2.A.45.1,3.A.4.1	-	-	ArsB
PHALIAPI_00539	224308.BSU05350	1.49e-182	508.0	COG1670@1|root,COG1670@2|Bacteria,1V8DB@1239|Firmicutes,4IPY3@91061|Bacilli,1ZREJ@1386|Bacillus	91061|Bacilli	J	GNAT acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	GNAT_acetyltran
PHALIAPI_00540	1051501.AYTL01000031_gene1396	1.08e-187	524.0	COG1316@1|root,COG1316@2|Bacteria,1TR1B@1239|Firmicutes,4IQSP@91061|Bacilli,1ZRN9@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	LytR_cpsA_psr
PHALIAPI_00541	1051501.AYTL01000031_gene1395	5.91e-157	443.0	COG0726@1|root,COG0726@2|Bacteria,1TYRH@1239|Firmicutes,4HEQR@91061|Bacilli,1ZEGM@1386|Bacillus	91061|Bacilli	G	deacetylase	nodB1	-	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1,Polysacc_deac_1
PHALIAPI_00542	1051501.AYTL01000031_gene1394	6.2e-200	561.0	28IY1@1|root,2Z8VV@2|Bacteria,1U7HY@1239|Firmicutes,4HFC5@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00543	1274524.BSONL12_02072	3.09e-278	769.0	COG0642@1|root,COG2205@2|Bacteria,1V12H@1239|Firmicutes,4HETS@91061|Bacilli,1ZH9B@1386|Bacillus	91061|Bacilli	T	GHKL domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
PHALIAPI_00544	1051501.AYTL01000031_gene1392	2.25e-156	441.0	COG0745@1|root,COG0745@2|Bacteria,1V18V@1239|Firmicutes,4HE9Y@91061|Bacilli,1ZMTB@1386|Bacillus	91061|Bacilli	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K07658	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_00545	224308.BSU05360	6.88e-191	533.0	COG0697@1|root,COG0697@2|Bacteria,1TSKX@1239|Firmicutes,4HBPE@91061|Bacilli,1ZDEA@1386|Bacillus	91061|Bacilli	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_00546	224308.BSU05370	0.0	936.0	COG1167@1|root,COG1167@2|Bacteria,1TPS5@1239|Firmicutes,4HB1C@91061|Bacilli,1ZASA@1386|Bacillus	91061|Bacilli	K	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	ydfD	-	-	ko:K18907	-	M00700,M00702	-	-	ko00000,ko00002,ko01504,ko03000	-	-	-	Aminotran_1_2,GntR
PHALIAPI_00547	224308.BSU05380	1.35e-147	415.0	COG1853@1|root,COG1853@2|Bacteria,1TRI4@1239|Firmicutes,4HE21@91061|Bacilli,1ZFZX@1386|Bacillus	91061|Bacilli	S	Flavin reductase like domain	ydfE	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
PHALIAPI_00548	224308.BSU05390	3.54e-157	441.0	COG0640@1|root,COG0640@2|Bacteria,1V007@1239|Firmicutes,4HDXJ@91061|Bacilli,1ZDVN@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, Arsenical Resistance Operon Repressor	ydfF	GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010035,GO:0010038,GO:0010288,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032791,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046870,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097063,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_20
PHALIAPI_00549	224308.BSU05400	7.91e-104	300.0	COG2128@1|root,COG2128@2|Bacteria,1V97G@1239|Firmicutes,4HHFF@91061|Bacilli,1ZFPE@1386|Bacillus	91061|Bacilli	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
PHALIAPI_00551	224308.BSU05410	5.86e-249	688.0	COG4585@1|root,COG4585@2|Bacteria,1UYVE@1239|Firmicutes,4HGNS@91061|Bacilli,1ZMNB@1386|Bacillus	91061|Bacilli	T	Histidine kinase	ydfH	-	2.7.13.3	ko:K11623	ko02020,map02020	M00484	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA_3
PHALIAPI_00552	224308.BSU05420	1.33e-141	400.0	COG2197@1|root,COG2197@2|Bacteria,1V207@1239|Firmicutes,4HG4K@91061|Bacilli,1ZGF3@1386|Bacillus	91061|Bacilli	K	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	ydfI	-	-	ko:K11624	ko02020,map02020	M00484	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	GerE,Response_reg
PHALIAPI_00553	224308.BSU05430	0.0	1326.0	COG2409@1|root,COG2409@2|Bacteria,1TQ7C@1239|Firmicutes,4HCW1@91061|Bacilli,1ZDKH@1386|Bacillus	91061|Bacilli	S	drug exporters of the RND superfamily	ydfJ	-	-	ko:K06994,ko:K11625	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	MMPL
PHALIAPI_00554	224308.BSU05440	1.27e-221	610.0	COG0596@1|root,COG0596@2|Bacteria,1V3C8@1239|Firmicutes,4HGMA@91061|Bacilli,1ZQW7@1386|Bacillus	91061|Bacilli	S	Alpha/beta hydrolase family	-	GO:0003674,GO:0003824,GO:0016787	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
PHALIAPI_00555	224308.BSU05450	2.65e-149	421.0	COG1811@1|root,COG1811@2|Bacteria,1UH19@1239|Firmicutes,4HB4E@91061|Bacilli,1ZBSK@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF554)	-	-	-	ko:K07150	-	-	-	-	ko00000	-	-	-	DUF554
PHALIAPI_00556	224308.BSU05460	1.44e-187	521.0	COG0789@1|root,COG4978@1|root,COG0789@2|Bacteria,COG4978@2|Bacteria,1V48S@1239|Firmicutes,4HGJF@91061|Bacilli,1ZQ1T@1386|Bacillus	91061|Bacilli	K	Bacterial transcription activator, effector binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GyrI-like,MerR_1
PHALIAPI_00557	224308.BSU05470	8.64e-198	550.0	COG0053@1|root,COG0053@2|Bacteria,1TSGY@1239|Firmicutes,4H9WP@91061|Bacilli,1ZAPN@1386|Bacillus	91061|Bacilli	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	ydfM	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
PHALIAPI_00558	224308.BSU05480	1.91e-142	402.0	COG0778@1|root,COG0778@2|Bacteria,1V1NQ@1239|Firmicutes,4HHS6@91061|Bacilli,1ZE4B@1386|Bacillus	91061|Bacilli	C	nitroreductase	ydfN	-	-	ko:K15976	-	-	-	-	ko00000,ko01000	-	-	-	Nitroreductase
PHALIAPI_00559	224308.BSU05490	1.29e-236	649.0	COG0346@1|root,COG0346@2|Bacteria,1TQCN@1239|Firmicutes,4HAMC@91061|Bacilli,1ZAQY@1386|Bacillus	91061|Bacilli	E	COG0346 Lactoylglutathione lyase and related lyases	ydfO	-	-	ko:K15975	-	-	-	-	ko00000	-	-	-	Glyoxalase
PHALIAPI_00560	224308.BSU05500	8.02e-84	248.0	COG2259@1|root,COG2259@2|Bacteria,1V7TX@1239|Firmicutes,4HJ1T@91061|Bacilli,1ZGHR@1386|Bacillus	91061|Bacilli	S	DoxX	ydfP	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
PHALIAPI_00561	224308.BSU05510	2.27e-75	225.0	COG0526@1|root,COG0526@2|Bacteria,1VFUD@1239|Firmicutes,4HNQS@91061|Bacilli,1ZJBR@1386|Bacillus	91061|Bacilli	CO	Thioredoxin	ydfQ	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin
PHALIAPI_00562	224308.BSU05560	1.69e-21	86.7	2EQG8@1|root,33I29@2|Bacteria,1VMF2@1239|Firmicutes,4IAND@91061|Bacilli,1ZJ0K@1386|Bacillus	91061|Bacilli	S	Spore germination protein gerPA/gerPF	ydgA	-	-	-	-	-	-	-	-	-	-	-	gerPA
PHALIAPI_00563	1274524.BSONL12_10381	7.9e-41	136.0	2E3GS@1|root,32YFG@2|Bacteria,1VGU9@1239|Firmicutes,4HNWB@91061|Bacilli,1ZHW7@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00565	224308.BSU05530	2.44e-141	401.0	COG2323@1|root,COG2323@2|Bacteria,1V84I@1239|Firmicutes,4HJRH@91061|Bacilli,1ZR7T@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF421)	ydfR	-	-	-	-	-	-	-	-	-	-	-	DUF421
PHALIAPI_00566	224308.BSU05540	1.25e-109	319.0	COG2323@1|root,COG2323@2|Bacteria,1V0NU@1239|Firmicutes,4HFHX@91061|Bacilli,1ZQ04@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF421)	ydfS	-	-	-	-	-	-	-	-	-	-	-	DUF421
PHALIAPI_00567	224308.BSU05550	8.6e-88	259.0	COG0071@1|root,COG0071@2|Bacteria	2|Bacteria	O	Belongs to the small heat shock protein (HSP20) family	cotP	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	GvpH,HSP20
PHALIAPI_00568	224308.BSU05560	1.53e-47	152.0	2EQG8@1|root,33I29@2|Bacteria,1VMF2@1239|Firmicutes,4IAND@91061|Bacilli,1ZJ0K@1386|Bacillus	91061|Bacilli	S	Spore germination protein gerPA/gerPF	ydgA	-	-	-	-	-	-	-	-	-	-	-	gerPA
PHALIAPI_00569	224308.BSU05570	4.99e-44	144.0	2EQG8@1|root,33IXY@2|Bacteria,1W1ME@1239|Firmicutes,4I0CE@91061|Bacilli,1ZJH9@1386|Bacillus	91061|Bacilli	S	Spore germination protein gerPA/gerPF	ydgB	-	-	-	-	-	-	-	-	-	-	-	gerPA
PHALIAPI_00570	224308.BSU05580	4.92e-127	362.0	COG1309@1|root,COG1309@2|Bacteria,1V50Q@1239|Firmicutes,4HHD5@91061|Bacilli,1ZGFG@1386|Bacillus	91061|Bacilli	K	Bacterial regulatory proteins, tetR family	ydgC	GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_00571	224308.BSU05590	8.18e-70	211.0	2F6NF@1|root,33Z4Z@2|Bacteria,1VXVN@1239|Firmicutes,4HXT1@91061|Bacilli,1ZIJV@1386|Bacillus	91061|Bacilli	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
PHALIAPI_00572	224308.BSU05600	1.39e-111	320.0	COG0454@1|root,COG0456@2|Bacteria,1VAU8@1239|Firmicutes,4HMA6@91061|Bacilli,1ZFP4@1386|Bacillus	91061|Bacilli	K	Acetyltransferase	yycN	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_00573	1274524.BSONL12_13026	9.77e-62	190.0	COG0537@1|root,COG0537@2|Bacteria,1V9QX@1239|Firmicutes,4HJD9@91061|Bacilli,1ZHBN@1386|Bacillus	91061|Bacilli	FG	HIT domain	-	-	-	ko:K02503	-	-	-	-	ko00000,ko04147	-	-	-	HIT
PHALIAPI_00574	1121929.KB898665_gene2931	1.52e-176	504.0	COG0477@1|root,COG2814@2|Bacteria,1TQHD@1239|Firmicutes,4HBCZ@91061|Bacilli	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_2,PUCC,Sugar_tr
PHALIAPI_00575	1071073.KI530542_gene3184	1.48e-63	201.0	COG1309@1|root,COG1309@2|Bacteria,1V6J9@1239|Firmicutes,4HIJP@91061|Bacilli	91061|Bacilli	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_00576	224308.BSU05610	0.0	996.0	COG0488@1|root,COG0488@2|Bacteria,1TQNA@1239|Firmicutes,4H9VW@91061|Bacilli,1ZBZP@1386|Bacillus	91061|Bacilli	S	ABC transporter	expZ	-	-	ko:K18231	ko02010,map02010	-	-	-	br01600,ko00000,ko00001,ko01504,ko02000	3.A.1.121.1,3.A.1.121.3	-	-	ABC_tran,ABC_tran_Xtn
PHALIAPI_00577	224308.BSU05620	0.0	867.0	COG1113@1|root,COG1113@2|Bacteria,1TP97@1239|Firmicutes,4H9QX@91061|Bacilli,1ZAQB@1386|Bacillus	91061|Bacilli	E	COG1113 Gamma-aminobutyrate permease and related permeases	aapA	-	-	ko:K03293,ko:K11737	-	-	-	-	ko00000,ko02000	2.A.3.1,2.A.3.1.7	-	-	AA_permease
PHALIAPI_00578	224308.BSU05630	8.11e-116	332.0	COG2318@1|root,COG2318@2|Bacteria,1V51W@1239|Firmicutes,4HKV1@91061|Bacilli,1ZR49@1386|Bacillus	91061|Bacilli	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
PHALIAPI_00579	224308.BSU05640	1.99e-104	301.0	COG1846@1|root,COG1846@2|Bacteria,1VGV7@1239|Firmicutes,4HNX9@91061|Bacilli,1ZHGG@1386|Bacillus	91061|Bacilli	K	helix_turn_helix multiple antibiotic resistance protein	-	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_27,MarR,MarR_2
PHALIAPI_00580	224308.BSU05650	0.0	1463.0	COG1033@1|root,COG2409@1|root,COG1033@2|Bacteria,COG2409@2|Bacteria,1TQ7C@1239|Firmicutes,4HBM6@91061|Bacilli,1ZCFN@1386|Bacillus	91061|Bacilli	S	drug exporters of the RND superfamily	ydgH	-	-	ko:K06994	-	-	-	-	ko00000	-	-	-	MMPL
PHALIAPI_00581	224308.BSU05660	6.42e-147	414.0	COG0778@1|root,COG0778@2|Bacteria,1UYJU@1239|Firmicutes,4HBVQ@91061|Bacilli,1ZAQV@1386|Bacillus	91061|Bacilli	C	nitroreductase	ydgI	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
PHALIAPI_00582	224308.BSU05670	1.9e-89	264.0	COG1846@1|root,COG1846@2|Bacteria,1VXGR@1239|Firmicutes,4HX2D@91061|Bacilli,1ZRRD@1386|Bacillus	91061|Bacilli	K	Winged helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_00583	224308.BSU05680	4.02e-265	729.0	COG0477@1|root,COG2814@2|Bacteria,1TR6I@1239|Firmicutes,4HBX6@91061|Bacilli,1ZCB7@1386|Bacillus	91061|Bacilli	EGP	-transporter	tcaB	-	-	ko:K07552	-	-	-	-	ko00000,ko02000	2.A.1.2	-	-	MFS_1
PHALIAPI_00584	224308.BSU05690	1.45e-154	436.0	COG0730@1|root,COG0730@2|Bacteria,1TRFG@1239|Firmicutes,4HGR6@91061|Bacilli,1ZEEX@1386|Bacillus	91061|Bacilli	S	membrane transporter protein	ydhB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
PHALIAPI_00585	224308.BSU05700	5.87e-155	435.0	COG1802@1|root,COG1802@2|Bacteria,1V6GK@1239|Firmicutes,4HIN7@91061|Bacilli,1ZFQP@1386|Bacillus	91061|Bacilli	K	FCD	ydhC	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
PHALIAPI_00586	224308.BSU05710	1.93e-304	830.0	COG1388@1|root,COG3858@1|root,COG1388@2|Bacteria,COG3858@2|Bacteria,1TQK2@1239|Firmicutes,4HB5I@91061|Bacilli,1ZF99@1386|Bacillus	91061|Bacilli	M	Glycosyl hydrolase	ydhD	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_18,LysM
PHALIAPI_00587	224308.BSU05720	4.57e-288	786.0	COG1819@1|root,COG1819@2|Bacteria,1TSPC@1239|Firmicutes,4HB9I@91061|Bacilli,1ZB3Z@1386|Bacillus	91061|Bacilli	CG	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase	ydhE	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008194,GO:0016740,GO:0016757,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464	-	-	-	-	-	-	-	-	-	-	UDPGT
PHALIAPI_00588	224308.BSU05730	2.04e-161	452.0	299QV@1|root,2ZWT3@2|Bacteria,1VBIX@1239|Firmicutes,4HI89@91061|Bacilli,1ZEV8@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4352
PHALIAPI_00589	224308.BSU05740	0.0	904.0	COG1785@1|root,COG1785@2|Bacteria,1TQCI@1239|Firmicutes,4HA27@91061|Bacilli,1ZB3J@1386|Bacillus	91061|Bacilli	P	Belongs to the alkaline phosphatase family	phoB	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	Alk_phosphatase
PHALIAPI_00590	224308.BSU05750	3.75e-86	253.0	COG5646@1|root,COG5646@2|Bacteria,1V6QT@1239|Firmicutes,4HIUI@91061|Bacilli,1ZFK6@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DU1801)	frataxin	-	-	ko:K05937	-	-	-	-	ko00000	-	-	-	DUF1801
PHALIAPI_00592	224308.BSU05770	1.8e-106	307.0	COG0454@1|root,COG0454@2|Bacteria,1UHNV@1239|Firmicutes,4IS4R@91061|Bacilli,1ZS7G@1386|Bacillus	91061|Bacilli	K	Acetyltransferase (GNAT) domain	-	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0044424,GO:0044464	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_00593	224308.BSU05780	2.7e-231	637.0	COG1078@1|root,COG1078@2|Bacteria,1TQZH@1239|Firmicutes,4HD6U@91061|Bacilli,1ZBN3@1386|Bacillus	91061|Bacilli	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	ydhJ	GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576	-	ko:K06885	-	-	-	-	ko00000	-	-	-	HD
PHALIAPI_00594	224308.BSU05790	9.05e-127	362.0	COG1388@1|root,COG1388@2|Bacteria,1V3Q9@1239|Firmicutes,4HH9X@91061|Bacilli,1ZGK9@1386|Bacillus	91061|Bacilli	M	Protein of unknown function (DUF1541)	ydhK	-	-	-	-	-	-	-	-	-	-	-	DUF1541
PHALIAPI_00595	224308.BSU05800	6.3e-255	702.0	COG0477@1|root,COG2814@2|Bacteria,1TRNU@1239|Firmicutes,4HCSX@91061|Bacilli,1ZCJJ@1386|Bacillus	91061|Bacilli	EGP	COG2814 Arabinose efflux permease	ydhL	-	-	ko:K18567	-	-	-	-	ko00000,ko02000	2.A.1.2.25	-	-	MFS_1,Sugar_tr
PHALIAPI_00596	224308.BSU05810	1.88e-63	194.0	COG1440@1|root,COG1440@2|Bacteria,1VADE@1239|Firmicutes,4HKCQ@91061|Bacilli,1ZQH2@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	ydhM	-	2.7.1.196,2.7.1.205	ko:K02760	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.3.2	-	-	PTS_IIB
PHALIAPI_00597	224308.BSU05820	1.97e-66	202.0	COG1447@1|root,COG1447@2|Bacteria,1VA8Z@1239|Firmicutes,4HM1B@91061|Bacilli,1ZHBT@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	ydhN3	-	2.7.1.196,2.7.1.205	ko:K02759	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.3.2	-	iYO844.BSU05820	PTS_IIA
PHALIAPI_00598	224308.BSU05830	1.31e-304	832.0	COG1455@1|root,COG1455@2|Bacteria,1TP8D@1239|Firmicutes,4H9W2@91061|Bacilli,1ZBJ7@1386|Bacillus	91061|Bacilli	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane	celB	-	-	ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2	-	-	PTS_EIIC
PHALIAPI_00599	224308.BSU05840	0.0	978.0	COG2723@1|root,COG2723@2|Bacteria,1TP19@1239|Firmicutes,4H9KU@91061|Bacilli,1ZBF2@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 1 family	ydhP	GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008422,GO:0015926,GO:0016787,GO:0016798,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135,GO:1901657	3.2.1.21,3.2.1.86	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	-	R00026,R00839,R02558,R02887,R02985,R03527,R04949,R04998,R05133,R05134,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GT1	-	Glyco_hydro_1
PHALIAPI_00600	224308.BSU05850	1.44e-166	466.0	COG2188@1|root,COG2188@2|Bacteria,1V0UW@1239|Firmicutes,4HD10@91061|Bacilli,1ZE1N@1386|Bacillus	91061|Bacilli	K	UTRA	ydhQ	-	-	ko:K03492	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
PHALIAPI_00601	224308.BSU05860	6.73e-212	585.0	COG1940@1|root,COG1940@2|Bacteria,1TQU4@1239|Firmicutes,4HA1C@91061|Bacilli,1ZDIZ@1386|Bacillus	91061|Bacilli	GK	COG1940 Transcriptional regulator sugar kinase	gmuE	-	2.7.1.4	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	-	R00760,R00867,R03920	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	ROK
PHALIAPI_00602	224308.BSU05870	3.44e-238	653.0	COG1482@1|root,COG1482@2|Bacteria,1VRGI@1239|Firmicutes,4HBFW@91061|Bacilli,1ZDJI@1386|Bacillus	91061|Bacilli	G	mannose-6-phosphate isomerase	manA	-	5.3.1.8	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01819	RC00376	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU12020	PMI_typeI
PHALIAPI_00603	224308.BSU05880	2.17e-267	731.0	COG4124@1|root,COG4124@2|Bacteria,1VW9J@1239|Firmicutes,4HWU3@91061|Bacilli,1ZEI1@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 26 family	ydhT1	-	3.2.1.78	ko:K01218	ko00051,ko02024,map00051,map02024	-	R01332	RC00467	ko00000,ko00001,ko01000	-	GH26	-	Glyco_hydro_26
PHALIAPI_00604	1051501.AYTL01000038_gene395	4.89e-202	559.0	COG3546@1|root,COG3546@2|Bacteria,1TP0F@1239|Firmicutes,4HBA9@91061|Bacilli,1ZDFW@1386|Bacillus	91061|Bacilli	P	Catalase	ydhU	-	-	ko:K07217	-	-	-	-	ko00000	-	-	-	Mn_catalase
PHALIAPI_00607	1051501.AYTL01000008_gene1340	1.13e-53	168.0	2DMNG@1|root,32SP1@2|Bacteria,1VAXC@1239|Firmicutes,4HM1Q@91061|Bacilli,1ZI92@1386|Bacillus	91061|Bacilli	S	COG NOG14552 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00610	224308.BSU05900	3.83e-231	636.0	COG0611@1|root,COG0611@2|Bacteria,1V0SM@1239|Firmicutes,4HG10@91061|Bacilli,1ZBME@1386|Bacillus	91061|Bacilli	H	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1	thiL	-	2.7.4.16	ko:K00946	ko00730,ko01100,map00730,map01100	M00127	R00617	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU05900	AIRS,AIRS_C
PHALIAPI_00611	224308.BSU05910	7.42e-112	321.0	COG0802@1|root,COG0802@2|Bacteria,1V6CV@1239|Firmicutes,4HIIF@91061|Bacilli,1ZGBU@1386|Bacillus	91061|Bacilli	S	ATPase or kinase	ydiB	GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360	-	ko:K06925	-	-	-	-	ko00000,ko03016	-	-	-	TsaE
PHALIAPI_00612	224308.BSU05920	1.19e-161	452.0	COG1214@1|root,COG1214@2|Bacteria,1V4YX@1239|Firmicutes,4HHD7@91061|Bacilli,1ZC43@1386|Bacillus	91061|Bacilli	O	COG1214 Inactive homolog of metal-dependent proteases	yeaZ	GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360	2.3.1.234	ko:K01409,ko:K14742	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
PHALIAPI_00613	224308.BSU05930	1.41e-108	312.0	COG0454@1|root,COG0456@2|Bacteria,1V6KU@1239|Firmicutes,4HIKU@91061|Bacilli,1ZGAT@1386|Bacillus	91061|Bacilli	K	This enzyme acetylates the N-terminal alanine of ribosomal protein S18	rimI	-	2.3.1.128	ko:K03789	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_1
PHALIAPI_00614	224308.BSU05940	3.84e-240	660.0	COG0533@1|root,COG0533@2|Bacteria,1TQDR@1239|Firmicutes,4HANB@91061|Bacilli,1ZBT3@1386|Bacillus	91061|Bacilli	O	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction	tsaD	GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360	2.3.1.234	ko:K01409	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
PHALIAPI_00615	224308.BSU05950	0.0	1147.0	COG0488@1|root,COG0488@2|Bacteria,1TPAX@1239|Firmicutes,4HBVV@91061|Bacilli,1ZB7Z@1386|Bacillus	91061|Bacilli	S	ABC transporter	ydiF	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_CTD,ABC_tran_Xtn
PHALIAPI_00616	224308.BSU05960	1.46e-117	336.0	COG0315@1|root,COG0315@2|Bacteria,1V3J4@1239|Firmicutes,4HH39@91061|Bacilli,1ZFIK@1386|Bacillus	91061|Bacilli	H	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)	moaC	-	4.6.1.17	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R11372	RC03425	ko00000,ko00001,ko01000	-	-	-	MoaC
PHALIAPI_00617	224308.BSU05970	2.14e-148	418.0	COG2344@1|root,COG2344@2|Bacteria,1TSMR@1239|Firmicutes,4HB7Q@91061|Bacilli,1ZANM@1386|Bacillus	91061|Bacilli	K	Modulates transcription in response to changes in cellular NADH NAD( ) redox state	rex	-	-	ko:K01926	-	-	-	-	ko00000,ko03000	-	-	-	CoA_binding,Put_DNA-bind_N
PHALIAPI_00618	224308.BSU05980	5.48e-31	108.0	COG1826@1|root,COG1826@2|Bacteria,1VFP2@1239|Firmicutes,4HNM7@91061|Bacilli,1ZIUG@1386|Bacillus	91061|Bacilli	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system	tatA	-	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
PHALIAPI_00619	224308.BSU05990	8.73e-162	455.0	COG0805@1|root,COG0805@2|Bacteria,1U7N7@1239|Firmicutes,4HB1U@91061|Bacilli,1ZBYZ@1386|Bacillus	91061|Bacilli	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes	tatC	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
PHALIAPI_00620	224308.BSU06000	3.2e-37	125.0	29ZQY@1|root,30MRQ@2|Bacteria,1UAKQ@1239|Firmicutes,4IKZC@91061|Bacilli,1ZIH1@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF4305)	ydiK	-	-	-	-	-	-	-	-	-	-	-	DUF4305
PHALIAPI_00621	224308.BSU06010	1.43e-165	464.0	COG1266@1|root,COG1266@2|Bacteria,1UZGJ@1239|Firmicutes,4HFCB@91061|Bacilli,1ZBE1@1386|Bacillus	91061|Bacilli	S	CAAX protease self-immunity	ydiL	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
PHALIAPI_00622	224308.BSU06020	2.14e-58	181.0	COG0234@1|root,COG0234@2|Bacteria,1V9ZM@1239|Firmicutes,4HKEK@91061|Bacilli,1ZGZ1@1386|Bacillus	91061|Bacilli	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	groS	GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077	-	ko:K04078	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Cpn10
PHALIAPI_00623	224308.BSU06030	0.0	984.0	COG0459@1|root,COG0459@2|Bacteria,1TP1T@1239|Firmicutes,4HA38@91061|Bacilli,1ZBKJ@1386|Bacillus	91061|Bacilli	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0001817,GO:0001819,GO:0001871,GO:0002791,GO:0002793,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009986,GO:0009987,GO:0016465,GO:0030246,GO:0030247,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044764,GO:0046812,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051082,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051704,GO:0061077,GO:0065007,GO:0070201,GO:0090087,GO:0098630,GO:0098743,GO:0101031,GO:1903530,GO:1903532,GO:1904951,GO:1990220,GO:2000482,GO:2000484,GO:2001065	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
PHALIAPI_00624	1274524.BSONL12_13101	1.89e-193	541.0	COG1073@1|root,COG1073@2|Bacteria,1V1KI@1239|Firmicutes,4HFUC@91061|Bacilli,1ZG04@1386|Bacillus	91061|Bacilli	S	Abhydrolase domain containing 18	ydjC	-	-	-	-	-	-	-	-	-	-	-	DUF2048
PHALIAPI_00625	224308.BSU06140	0.0	1604.0	COG0457@1|root,COG0457@2|Bacteria,1VSHC@1239|Firmicutes,4HVBE@91061|Bacilli,1ZM8Y@1386|Bacillus	91061|Bacilli	K	NB-ARC domain	gutR	-	-	ko:K16247	-	-	-	-	ko00000,ko03000	-	-	-	NB-ARC
PHALIAPI_00626	224308.BSU06150	1.24e-257	706.0	COG1063@1|root,COG1063@2|Bacteria,1TPWP@1239|Firmicutes,4IPQ3@91061|Bacilli,1ZRDJ@1386|Bacillus	91061|Bacilli	E	Dehydrogenase	gutB	-	1.1.1.14	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	M00014	R00875,R01896	RC00085,RC00102	ko00000,ko00001,ko00002,ko01000	-	-	-	ADH_N,ADH_zinc_N
PHALIAPI_00627	224308.BSU06160	0.0	875.0	COG2211@1|root,COG2211@2|Bacteria,1TRA5@1239|Firmicutes,4HBAI@91061|Bacilli,1ZFRW@1386|Bacillus	91061|Bacilli	G	MFS/sugar transport protein	gutP	-	-	ko:K03292,ko:K16248	-	-	-	-	ko00000,ko02000	2.A.2	-	-	MFS_2
PHALIAPI_00628	224308.BSU06170	3.59e-217	600.0	COG0524@1|root,COG0524@2|Bacteria,1TPGM@1239|Firmicutes,4HCVK@91061|Bacilli,1ZPUT@1386|Bacillus	91061|Bacilli	G	pfkB family carbohydrate kinase	ydjE	-	2.7.1.4	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	-	R00760,R00867,R03920	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
PHALIAPI_00629	224308.BSU06180	1.79e-146	414.0	COG1842@1|root,COG1842@2|Bacteria,1UYNB@1239|Firmicutes,4HAMR@91061|Bacilli,1ZBUS@1386|Bacillus	91061|Bacilli	KT	Phage shock protein A	pspA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K03969	-	-	-	-	ko00000	-	-	-	PspA_IM30
PHALIAPI_00630	224308.BSU06190	3.49e-226	625.0	COG1198@1|root,COG1198@2|Bacteria,1UI22@1239|Firmicutes,4HBK5@91061|Bacilli,1ZD8P@1386|Bacillus	91061|Bacilli	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	ydjG	-	-	-	-	-	-	-	-	-	-	-	TF_Zn_Ribbon
PHALIAPI_00631	224308.BSU06200	3.65e-173	484.0	COG1512@1|root,COG1512@2|Bacteria,1V8N5@1239|Firmicutes,4HN3N@91061|Bacilli,1ZF0N@1386|Bacillus	91061|Bacilli	S	COG1512 Beta-propeller domains of methanol dehydrogenase type	ydjH	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
PHALIAPI_00632	224308.BSU06210	1.64e-199	556.0	COG4260@1|root,COG4260@2|Bacteria,1TRYU@1239|Firmicutes,4HB4Z@91061|Bacilli,1ZE87@1386|Bacillus	91061|Bacilli	S	virion core protein (lumpy skin disease virus)	ydjI	-	-	-	-	-	-	-	-	-	-	-	Band_7_1,zf-ribbon_3
PHALIAPI_00633	224308.BSU06220	1.37e-248	682.0	28JN3@1|root,2Z9EI@2|Bacteria,1UYYN@1239|Firmicutes,4HDZ8@91061|Bacilli	91061|Bacilli	S	Ion transport 2 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Ion_trans_2
PHALIAPI_00634	224308.BSU06230	0.0	889.0	COG0477@1|root,COG2814@2|Bacteria,1TREV@1239|Firmicutes,4HAN1@91061|Bacilli,1ZAUM@1386|Bacillus	91061|Bacilli	U	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	iolT	GO:0003674,GO:0005215,GO:0005351,GO:0005402,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034219,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600	-	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	-	-	-	ko00000,ko00001,ko02000	2.A.1.1,2.A.1.1.2,2.A.1.1.26	-	-	Sugar_tr
PHALIAPI_00635	224308.BSU06240	3.5e-249	684.0	COG1063@1|root,COG1063@2|Bacteria,1TPWP@1239|Firmicutes,4HABC@91061|Bacilli,1ZBQS@1386|Bacillus	91061|Bacilli	E	Dehydrogenase	ydjL	GO:0000721,GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0055114	1.1.1.264,1.1.1.303,1.1.1.4	ko:K00004,ko:K00098	ko00650,map00650	-	R02855,R02946,R05684,R10504	RC00089,RC00205,RC00525	ko00000,ko00001,ko01000	-	-	iYO844.BSU06240	ADH_N,ADH_N_assoc,ADH_zinc_N
PHALIAPI_00636	224308.BSU06250	1.79e-84	249.0	COG0797@1|root,COG0797@2|Bacteria,1VPGQ@1239|Firmicutes,4HXBZ@91061|Bacilli,1ZG1Y@1386|Bacillus	91061|Bacilli	M	Lytic transglycolase	ydjM	-	-	-	-	-	-	-	-	-	-	-	DPBB_1
PHALIAPI_00637	224308.BSU06260	8.06e-208	579.0	COG0823@1|root,COG0823@2|Bacteria,1U2TZ@1239|Firmicutes,4HSNM@91061|Bacilli,1ZEIS@1386|Bacillus	91061|Bacilli	U	Involved in the tonB-independent uptake of proteins	ydjN	-	-	-	-	-	-	-	-	-	-	-	PD40
PHALIAPI_00639	224308.BSU06270	8.2e-48	152.0	2CGYI@1|root,32YUY@2|Bacteria,1VGI2@1239|Firmicutes,4HPBN@91061|Bacilli,1ZK65@1386|Bacillus	91061|Bacilli	S	Cold-inducible protein YdjO	ydjO	-	-	-	-	-	-	-	-	-	-	-	YdjO
PHALIAPI_00640	224308.BSU06280	1.4e-197	547.0	COG2267@1|root,COG2267@2|Bacteria,1UIX9@1239|Firmicutes,4ISVM@91061|Bacilli,1ZREK@1386|Bacillus	91061|Bacilli	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
PHALIAPI_00641	224308.BSU06290	2.78e-226	624.0	28IH1@1|root,2Z8IC@2|Bacteria,1TSE5@1239|Firmicutes,4HD81@91061|Bacilli,1ZDYE@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF4003)	yeaA	-	-	-	-	-	-	-	-	-	-	-	DUF4003
PHALIAPI_00642	224308.BSU06300	0.0	1074.0	COG2132@1|root,COG2132@2|Bacteria,1TQSU@1239|Firmicutes,4HDD6@91061|Bacilli,1ZD48@1386|Bacillus	91061|Bacilli	Q	multicopper oxidases	cotA	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0016722,GO:0052716,GO:0055114	1.16.3.3	ko:K06324	-	-	-	-	ko00000,ko01000	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
PHALIAPI_00643	224308.BSU06310	0.0	873.0	COG1113@1|root,COG1113@2|Bacteria,1TP97@1239|Firmicutes,4H9QX@91061|Bacilli,1ZS14@1386|Bacillus	91061|Bacilli	E	COG1113 Gamma-aminobutyrate permease and related permeases	gabP	-	-	ko:K11735	-	-	-	-	ko00000,ko02000	2.A.3.1.4,2.A.3.1.5	-	iYO844.BSU06310	AA_permease
PHALIAPI_00644	224308.BSU06320	1.76e-198	551.0	COG0053@1|root,COG0053@2|Bacteria,1TSGY@1239|Firmicutes,4H9WP@91061|Bacilli,1ZAPN@1386|Bacillus	91061|Bacilli	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	yeaB	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
PHALIAPI_00645	224308.BSU06330	6.29e-223	615.0	COG0714@1|root,COG0714@2|Bacteria,1TPKR@1239|Firmicutes,4HA0T@91061|Bacilli,1ZDJ1@1386|Bacillus	91061|Bacilli	S	COG0714 MoxR-like ATPases	yeaC	GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
PHALIAPI_00646	224308.BSU06340	4.55e-285	779.0	COG1721@1|root,COG1721@2|Bacteria,1TUWF@1239|Firmicutes,4HDRE@91061|Bacilli,1ZCAS@1386|Bacillus	91061|Bacilli	S	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)	yeaD	-	-	-	-	-	-	-	-	-	-	-	DUF58
PHALIAPI_00647	224308.BSU06350	0.0	1380.0	COG1305@1|root,COG1305@2|Bacteria,1TP8K@1239|Firmicutes,4HB2E@91061|Bacilli,1ZBUN@1386|Bacillus	91061|Bacilli	E	COG1305 Transglutaminase-like enzymes	yebA	-	-	-	-	-	-	-	-	-	-	-	DUF4129,Transglut_core
PHALIAPI_00648	224308.BSU06360	0.0	1041.0	COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,1TPG8@1239|Firmicutes,4HA7Q@91061|Bacilli,1ZB6Z@1386|Bacillus	91061|Bacilli	F	Catalyzes the synthesis of GMP from XMP	guaA	GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase,GMP_synt_C,NAD_synthase
PHALIAPI_00649	720555.BATR1942_00700	1.33e-112	324.0	COG1595@1|root,COG1595@2|Bacteria,1VYFR@1239|Firmicutes,4HNBH@91061|Bacilli,1ZQI1@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
PHALIAPI_00650	720555.BATR1942_00705	0.0	883.0	28PT3@1|root,2ZCEG@2|Bacteria,1V3FJ@1239|Firmicutes,4HG7M@91061|Bacilli,1ZFCJ@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF4179)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4179
PHALIAPI_00651	224308.BSU06370	2.68e-280	770.0	COG2252@1|root,COG2252@2|Bacteria,1TQC6@1239|Firmicutes,4HANG@91061|Bacilli,1ZARH@1386|Bacillus	91061|Bacilli	S	permease	pbuG	-	-	ko:K06901	-	-	-	-	ko00000,ko02000	2.A.1.40	-	iYO844.BSU06370	Xan_ur_permease
PHALIAPI_00652	224308.BSU06380	4.8e-164	462.0	COG3064@1|root,COG3064@2|Bacteria,1VK5M@1239|Firmicutes,4HS44@91061|Bacilli,1ZF8F@1386|Bacillus	91061|Bacilli	M	Membrane	yebC	-	-	-	-	-	-	-	-	-	-	-	zf-ribbon_3,zinc_ribbon_2
PHALIAPI_00654	224308.BSU06400	1.08e-119	343.0	COG4843@1|root,COG4843@2|Bacteria,1V14J@1239|Firmicutes,4HCBK@91061|Bacilli,1ZBPZ@1386|Bacillus	91061|Bacilli	S	UPF0316 protein	yebE	-	-	-	-	-	-	-	-	-	-	-	DUF2179
PHALIAPI_00655	224308.BSU06410	3.13e-38	127.0	2C5CS@1|root,33A0C@2|Bacteria,1VKIZ@1239|Firmicutes,4HRCC@91061|Bacilli,1ZJ2K@1386|Bacillus	91061|Bacilli	S	NETI protein	yebG	-	-	-	-	-	-	-	-	-	-	-	NETI
PHALIAPI_00656	224308.BSU06420	2.28e-108	312.0	COG0041@1|root,COG0041@2|Bacteria,1V1MV@1239|Firmicutes,4HFR7@91061|Bacilli,1ZFRE@1386|Bacillus	91061|Bacilli	F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)	purE	-	5.4.99.18	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07405	RC01947	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRC
PHALIAPI_00657	224308.BSU06430	1.74e-273	748.0	COG0026@1|root,COG0026@2|Bacteria,1TQCD@1239|Firmicutes,4H9M5@91061|Bacilli,1ZB8P@1386|Bacillus	91061|Bacilli	F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)	purK	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	6.3.4.18	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07404	RC01927	ko00000,ko00001,ko00002,ko01000	-	-	-	2-Hacid_dh_C,ATP-grasp
PHALIAPI_00658	224308.BSU06440	2.81e-314	855.0	COG0015@1|root,COG0015@2|Bacteria,1TPMM@1239|Firmicutes,4HACW@91061|Bacilli,1ZC7P@1386|Bacillus	91061|Bacilli	F	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily	purB	GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.3.2.2	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048,M00049	R01083,R04559	RC00379,RC00444,RC00445	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS09895	ADSL_C,Lyase_1
PHALIAPI_00659	1051501.AYTL01000011_gene47	3.39e-167	468.0	COG0152@1|root,COG0152@2|Bacteria,1TP11@1239|Firmicutes,4H9U8@91061|Bacilli,1ZAWJ@1386|Bacillus	91061|Bacilli	F	Belongs to the SAICAR synthetase family	purC	-	6.3.2.6	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04591	RC00064,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	SAICAR_synt
PHALIAPI_00660	224308.BSU06460	3.79e-52	164.0	COG1828@1|root,COG1828@2|Bacteria,1VEH1@1239|Firmicutes,4HP0E@91061|Bacilli,1ZHUG@1386|Bacillus	91061|Bacilli	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purS	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU06460	PurS
PHALIAPI_00661	224308.BSU06470	1.91e-166	464.0	COG0047@1|root,COG0047@2|Bacteria,1TP1B@1239|Firmicutes,4HAKZ@91061|Bacilli,1ZB9C@1386|Bacillus	91061|Bacilli	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purQ	GO:0003674,GO:0003824,GO:0004642,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase_5
PHALIAPI_00662	224308.BSU06480	0.0	1451.0	COG0046@1|root,COG0046@2|Bacteria,1TPAS@1239|Firmicutes,4HB3N@91061|Bacilli,1ZCN8@1386|Bacillus	91061|Bacilli	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purL	GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
PHALIAPI_00663	224308.BSU06490	0.0	936.0	COG0034@1|root,COG0034@2|Bacteria,1TPH3@1239|Firmicutes,4HAXU@91061|Bacilli,1ZCE0@1386|Bacillus	91061|Bacilli	F	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine	purF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	iSB619.SA_RS05225	GATase_6,GATase_7,Pribosyltran
PHALIAPI_00664	224308.BSU06500	4.02e-239	658.0	COG0150@1|root,COG0150@2|Bacteria,1TP9J@1239|Firmicutes,4HABW@91061|Bacilli,1ZBPS@1386|Bacillus	91061|Bacilli	F	Phosphoribosylformylglycinamidine cyclo-ligase	purM	-	6.3.3.1	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04208	RC01100	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
PHALIAPI_00665	224308.BSU06510	2.55e-137	388.0	COG0299@1|root,COG0299@2|Bacteria,1V3RJ@1239|Firmicutes,4HGY5@91061|Bacilli,1ZFSE@1386|Bacillus	91061|Bacilli	F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	purN	-	2.1.2.2	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	Formyl_trans_N
PHALIAPI_00666	224308.BSU06520	0.0	989.0	COG0138@1|root,COG0138@2|Bacteria,1TPQ5@1239|Firmicutes,4H9YY@91061|Bacilli,1ZD5E@1386|Bacillus	91061|Bacilli	F	Bifunctional purine biosynthesis protein PurH	purH	-	2.1.2.3,3.5.4.10	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	M00048	R01127,R04560	RC00026,RC00263,RC00456	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	AICARFT_IMPCHas,MGS
PHALIAPI_00667	224308.BSU06530	9.43e-297	810.0	COG0151@1|root,COG0151@2|Bacteria,1UHN9@1239|Firmicutes,4HA70@91061|Bacilli,1ZCE3@1386|Bacillus	91061|Bacilli	F	Belongs to the GARS family	purD	-	6.3.4.13	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144	RC00090,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS05245,iYO844.BSU06530	GARS_A,GARS_C,GARS_N
PHALIAPI_00668	224308.BSU06540	6.15e-95	276.0	COG1522@1|root,COG1522@2|Bacteria,1V3MI@1239|Firmicutes,4HH5Z@91061|Bacilli,1ZGV7@1386|Bacillus	91061|Bacilli	K	helix_turn_helix ASNC type	-	GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0043200,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
PHALIAPI_00669	224308.BSU06550	1.6e-289	792.0	COG0531@1|root,COG0531@2|Bacteria,1TT8K@1239|Firmicutes,4HCAU@91061|Bacilli,1ZCR4@1386|Bacillus	91061|Bacilli	E	Amino acid permease	-	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039	-	ko:K16263	-	-	-	-	ko00000,ko02000	2.A.3.13	-	-	AA_permease_2
PHALIAPI_00670	1051501.AYTL01000011_gene58	3.45e-37	127.0	2EAXM@1|root,334YP@2|Bacteria,1VIHS@1239|Firmicutes,4HR0C@91061|Bacilli,1ZJ0E@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892
PHALIAPI_00671	224308.BSU06560	0.0	1188.0	COG1001@1|root,COG1001@2|Bacteria,1TP84@1239|Firmicutes,4HAIR@91061|Bacilli,1ZAY2@1386|Bacillus	91061|Bacilli	F	adenine deaminase	yerA	GO:0003674,GO:0003824,GO:0006040,GO:0006044,GO:0006046,GO:0008150,GO:0008152,GO:0008448,GO:0009056,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0046348,GO:0071704,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901575	3.5.4.2	ko:K01486	ko00230,ko01100,map00230,map01100	-	R01244	RC00477	ko00000,ko00001,ko01000	-	-	-	Adenine_deam_C,Amidohydro_1
PHALIAPI_00672	224308.BSU06570	1.12e-242	666.0	COG1470@1|root,COG1470@2|Bacteria,1TRGE@1239|Firmicutes,4HBPI@91061|Bacilli,1ZB6W@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3048) C-terminal domain	yerB	-	-	-	-	-	-	-	-	-	-	-	DUF3048,DUF3048_C
PHALIAPI_00673	1051501.AYTL01000011_gene61	7.62e-68	205.0	COG4496@1|root,COG4496@2|Bacteria,1VA04@1239|Firmicutes,4HKS8@91061|Bacilli,1ZH87@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yerC	-	-	-	-	-	-	-	-	-	-	-	Trp_repressor
PHALIAPI_00674	224308.BSU06590	0.0	1047.0	COG0069@1|root,COG0069@2|Bacteria,1TSHA@1239|Firmicutes,4HA97@91061|Bacilli,1ZCQH@1386|Bacillus	91061|Bacilli	E	Belongs to the glutamate synthase family	yerD	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.4.7.1	ko:K00284	ko00630,ko00910,ko01120,map00630,map00910,map01120	-	R00021,R10086	RC00006,RC00010	ko00000,ko00001,ko01000	-	-	-	Glu_synthase
PHALIAPI_00676	224308.BSU06600	6.11e-159	446.0	COG1646@1|root,COG1646@2|Bacteria,1TQQK@1239|Firmicutes,4H9YW@91061|Bacilli,1ZBBT@1386|Bacillus	91061|Bacilli	I	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales	pcrB	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576	-	ko:K07094	-	-	-	-	ko00000,ko01000	-	-	-	PcrB
PHALIAPI_00677	224308.BSU06610	0.0	1427.0	COG0210@1|root,COG0210@2|Bacteria,1TPSU@1239|Firmicutes,4HB12@91061|Bacilli,1ZCM9@1386|Bacillus	91061|Bacilli	L	ATP-dependent DNA helicase	pcrA	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
PHALIAPI_00678	224308.BSU06620	0.0	1276.0	COG0272@1|root,COG0272@2|Bacteria,1TPQ3@1239|Firmicutes,4HA1D@91061|Bacilli,1ZATN@1386|Bacillus	91061|Bacilli	L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	ligA	GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	6.5.1.2	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00382	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5
PHALIAPI_00679	224308.BSU06630	1.45e-280	767.0	COG4851@1|root,COG4851@2|Bacteria,1TSYE@1239|Firmicutes,4HBI8@91061|Bacilli,1ZBGV@1386|Bacillus	91061|Bacilli	S	COG4851 Protein involved in sex pheromone biosynthesis	camS	-	-	-	-	-	-	-	-	-	-	-	CamS
PHALIAPI_00680	224308.BSU06640	1.22e-250	686.0	COG2334@1|root,COG2334@2|Bacteria,1TSRC@1239|Firmicutes,4HEJ3@91061|Bacilli,1ZEJM@1386|Bacillus	91061|Bacilli	S	homoserine kinase type II (protein kinase fold)	yerI	-	-	-	-	-	-	-	-	-	-	-	APH
PHALIAPI_00681	224308.BSU06650	2.29e-160	449.0	COG1285@1|root,COG1285@2|Bacteria,1V409@1239|Firmicutes,4HGHY@91061|Bacilli,1ZBY0@1386|Bacillus	91061|Bacilli	S	MgtC SapB transporter	sapB	-	-	ko:K07507	-	-	-	-	ko00000,ko02000	9.B.20	-	-	MgtC
PHALIAPI_00682	224308.BSU06660	0.0	917.0	COG0591@1|root,COG0591@2|Bacteria,1TPVE@1239|Firmicutes,4H9KW@91061|Bacilli,1ZB64@1386|Bacillus	91061|Bacilli	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	putP	-	-	ko:K03307,ko:K11928	-	-	-	-	ko00000,ko02000	2.A.21,2.A.21.2	-	-	SSF
PHALIAPI_00683	1051501.AYTL01000011_gene70	2.11e-60	186.0	COG0721@1|root,COG0721@2|Bacteria,1VEK3@1239|Firmicutes,4HNNA@91061|Bacilli,1ZH54@1386|Bacillus	91061|Bacilli	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatC	-	6.3.5.6,6.3.5.7	ko:K02435	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Glu-tRNAGln
PHALIAPI_00684	224308.BSU06680	0.0	951.0	COG0154@1|root,COG0154@2|Bacteria,1TP0C@1239|Firmicutes,4HBAZ@91061|Bacilli,1ZAT1@1386|Bacillus	91061|Bacilli	J	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)	gatA	-	6.3.5.6,6.3.5.7	ko:K02433	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
PHALIAPI_00685	224308.BSU06690	0.0	932.0	COG0064@1|root,COG0064@2|Bacteria,1TPG3@1239|Firmicutes,4HAFB@91061|Bacilli,1ZB3K@1386|Bacillus	91061|Bacilli	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatB	GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564	6.3.5.6,6.3.5.7	ko:K02434	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	GatB_N,GatB_Yqey
PHALIAPI_00686	224308.BSU06700	1.26e-191	533.0	COG1309@1|root,COG1309@2|Bacteria,1UDHR@1239|Firmicutes,4HFAX@91061|Bacilli,1ZFND@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yerO	GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_00687	224308.BSU06710	0.0	1825.0	COG0841@1|root,COG0841@2|Bacteria,1TQ03@1239|Firmicutes,4HAFP@91061|Bacilli,1ZBJ3@1386|Bacillus	91061|Bacilli	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	swrC	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
PHALIAPI_00688	224308.BSU06720	1.8e-218	602.0	COG1597@1|root,COG1597@2|Bacteria,1TQAU@1239|Firmicutes,4H9WD@91061|Bacilli,1ZBPD@1386|Bacillus	91061|Bacilli	I	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase	dagK	GO:0003674,GO:0003824,GO:0004143,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237	2.7.1.107	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	-	R02240	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	DAGK_cat
PHALIAPI_00689	720555.BATR1942_00900	0.0	900.0	COG2265@1|root,COG2265@2|Bacteria,1TP4H@1239|Firmicutes,4HA6M@91061|Bacilli,1ZB9G@1386|Bacillus	91061|Bacilli	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	rlmCD	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070041,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.190	ko:K03215	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TRAM,tRNA_U5-meth_tr
PHALIAPI_00690	1453498.LG45_11840	2.04e-39	159.0	COG0457@1|root,COG0846@1|root,COG1672@1|root,COG0457@2|Bacteria,COG0846@2|Bacteria,COG1672@2|Bacteria,4NXG5@976|Bacteroidetes	976|Bacteroidetes	K	Wd-40 repeat	-	-	-	-	-	-	-	-	-	-	-	-	SIR2_2,TPR_11
PHALIAPI_00691	224308.BSU40210	3.89e-24	95.1	29THP@1|root,30EQZ@2|Bacteria,1UCUY@1239|Firmicutes,4IPB0@91061|Bacilli,1ZPNA@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00692	224308.BSU40200	4.64e-159	474.0	COG5293@1|root,COG5293@2|Bacteria,1V11B@1239|Firmicutes,4IITG@91061|Bacilli,1ZKMH@1386|Bacillus	91061|Bacilli	S	Uncharacterised protein conserved in bacteria (DUF2326)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2326
PHALIAPI_00693	1246626.BleG1_0098	6.88e-146	440.0	2F7EH@1|root,33ZVC@2|Bacteria,1VY5X@1239|Firmicutes,4HY3H@91061|Bacilli,1ZN1E@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00694	326423.RBAM_007180	1.91e-67	214.0	COG3183@1|root,COG3183@2|Bacteria,1VP18@1239|Firmicutes,4IT2C@91061|Bacilli,1ZRGS@1386|Bacillus	91061|Bacilli	V	Domain of unknown function (DUF3578)	-	-	-	ko:K07451	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	DUF3578,HNH
PHALIAPI_00696	1380408.AVGH01000033_gene392	2.92e-35	125.0	2CBDV@1|root,337BY@2|Bacteria,1VHAK@1239|Firmicutes,4HPBE@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00698	1051501.AYTL01000011_gene80	8.07e-49	157.0	COG5444@1|root,32YNG@2|Bacteria,1VJMI@1239|Firmicutes,4HPD8@91061|Bacilli,1ZI9K@1386|Bacillus	91061|Bacilli	S	Protein of unknown function, DUF600	-	-	-	-	-	-	-	-	-	-	-	-	DUF600
PHALIAPI_00699	1051501.AYTL01000011_gene81	2.11e-108	312.0	COG5444@1|root,32VWS@2|Bacteria,1VD6Z@1239|Firmicutes,4HM01@91061|Bacilli,1ZHRE@1386|Bacillus	91061|Bacilli	S	Protein of unknown function, DUF600	-	-	-	-	-	-	-	-	-	-	-	-	DUF600
PHALIAPI_00700	1051501.AYTL01000011_gene82	0.0	1228.0	COG5444@1|root,COG5444@2|Bacteria,1V674@1239|Firmicutes,4HKPS@91061|Bacilli,1ZF5M@1386|Bacillus	91061|Bacilli	L	nucleic acid phosphodiester bond hydrolysis	-	-	-	-	-	-	-	-	-	-	-	-	Endonuclea_NS_2,LXG
PHALIAPI_00702	880070.Cycma_3431	1.4e-126	370.0	COG3586@1|root,COG3586@2|Bacteria,4NERW@976|Bacteroidetes,47VPD@768503|Cytophagia	976|Bacteroidetes	L	endonuclease activity	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00703	1292035.H476_0759	2.28e-14	80.5	COG3755@1|root,COG3755@2|Bacteria,1VGNZ@1239|Firmicutes,24SYM@186801|Clostridia	186801|Clostridia	S	Pfam:DUF1311	-	-	-	-	-	-	-	-	-	-	-	-	LprI
PHALIAPI_00704	224308.BSU06830	2.26e-267	732.0	COG0457@1|root,COG0457@2|Bacteria,1TVDD@1239|Firmicutes,4IJYM@91061|Bacilli,1ZEMY@1386|Bacillus	91061|Bacilli	S	Tetratricopeptide repeat	rapH	-	-	ko:K06366	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	-	-	TPR_12,TPR_2,TPR_7
PHALIAPI_00706	224308.BSU06840	1.09e-162	456.0	COG0217@1|root,COG0217@2|Bacteria,1TPP5@1239|Firmicutes,4H9WJ@91061|Bacilli,1ZBN0@1386|Bacillus	91061|Bacilli	K	transcriptional regulatory protein	yeeN	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Transcrip_reg
PHALIAPI_00708	224308.BSU06860	6.99e-130	369.0	COG1309@1|root,COG1309@2|Bacteria,1VTZE@1239|Firmicutes,4HTVN@91061|Bacilli,1ZH8K@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	dhaR3	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	ko:K16137	-	-	-	-	ko00000,ko03000	-	-	-	TetR_N
PHALIAPI_00709	224308.BSU06870	8.24e-104	300.0	COG3631@1|root,COG3631@2|Bacteria,1VXIF@1239|Firmicutes,4HXSI@91061|Bacilli,1ZNB7@1386|Bacillus	91061|Bacilli	S	SnoaL-like domain	yesE	-	-	ko:K06893	-	-	-	-	ko00000	-	-	-	SnoaL_2
PHALIAPI_00710	224308.BSU06880	1.04e-189	528.0	COG0702@1|root,COG0702@2|Bacteria,1VQTZ@1239|Firmicutes,4HU7Q@91061|Bacilli,1ZGK1@1386|Bacillus	91061|Bacilli	GM	NAD(P)H-binding	yesF	-	-	-	-	-	-	-	-	-	-	-	Epimerase,NAD_binding_10,NmrA
PHALIAPI_00711	224308.BSU06890	3.8e-60	184.0	2E85N@1|root,332J6@2|Bacteria,1VFSE@1239|Firmicutes,4HNIY@91061|Bacilli,1ZISW@1386|Bacillus	91061|Bacilli	S	Spore coat associated protein JA (CotJA)	cotJA	-	-	ko:K06332	-	-	-	-	ko00000	-	-	-	CotJA
PHALIAPI_00712	224308.BSU06900	2.31e-61	187.0	2E34J@1|root,32Y4N@2|Bacteria,1VESM@1239|Firmicutes,4HKID@91061|Bacilli,1ZI8X@1386|Bacillus	91061|Bacilli	S	CotJB protein	cotJB	-	-	ko:K06333	-	-	-	-	ko00000	-	-	-	CotJB
PHALIAPI_00713	224308.BSU06910	1.04e-133	379.0	COG3546@1|root,COG3546@2|Bacteria,1TQVQ@1239|Firmicutes,4HA34@91061|Bacilli,1ZQQY@1386|Bacillus	91061|Bacilli	P	Spore Coat	cotJC	-	-	ko:K06334	-	-	-	-	ko00000	-	-	-	Mn_catalase
PHALIAPI_00714	224308.BSU06920	4.15e-131	371.0	COG0454@1|root,COG0454@2|Bacteria,1VBXZ@1239|Firmicutes,4ISWT@91061|Bacilli,1ZQWG@1386|Bacillus	91061|Bacilli	K	Acetyltransferase (GNAT) family	yesJ	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_00716	224308.BSU06940	2.86e-129	369.0	COG5578@1|root,COG5578@2|Bacteria,1V4YK@1239|Firmicutes,4HHBR@91061|Bacilli,1ZGAP@1386|Bacillus	91061|Bacilli	S	Protein of unknown function, DUF624	yesL	-	-	-	-	-	-	-	-	-	-	-	DUF624
PHALIAPI_00717	224308.BSU06950	0.0	1120.0	COG2972@1|root,COG2972@2|Bacteria,1UU89@1239|Firmicutes,4HECK@91061|Bacilli,1ZAUI@1386|Bacillus	91061|Bacilli	T	Histidine kinase	yesM	-	2.7.13.3	ko:K07718	ko02020,map02020	M00519	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,His_kinase,dCache_1
PHALIAPI_00718	224308.BSU06960	3.27e-256	703.0	COG2207@1|root,COG4753@1|root,COG2207@2|Bacteria,COG4753@2|Bacteria,1UZKW@1239|Firmicutes,4HF1S@91061|Bacilli,1ZPXG@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, arabinose operon control protein	-	-	-	ko:K07720	ko02020,map02020	M00519	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_18,Response_reg
PHALIAPI_00719	224308.BSU06970	1.68e-313	853.0	COG1653@1|root,COG1653@2|Bacteria,1TQJV@1239|Firmicutes,4HBW5@91061|Bacilli,1ZBWM@1386|Bacillus	91061|Bacilli	G	Bacterial extracellular solute-binding protein	yesO	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	iYO844.BSU06970	SBP_bac_1,SBP_bac_8
PHALIAPI_00720	224308.BSU06980	2.02e-218	603.0	COG1175@1|root,COG1175@2|Bacteria,1TPTZ@1239|Firmicutes,4HB63@91061|Bacilli,1ZAQ5@1386|Bacillus	91061|Bacilli	G	Binding-protein-dependent transport system inner membrane component	yesP	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	ko:K02025	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
PHALIAPI_00721	224308.BSU06990	3.08e-211	583.0	COG0395@1|root,COG0395@2|Bacteria,1TSYB@1239|Firmicutes,4HBHQ@91061|Bacilli,1ZEBZ@1386|Bacillus	91061|Bacilli	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	iYO844.BSU06990	BPD_transp_1
PHALIAPI_00722	224308.BSU07000	3.26e-253	694.0	COG4225@1|root,COG4225@2|Bacteria,1UYKV@1239|Firmicutes,4HEBW@91061|Bacilli,1ZDHW@1386|Bacillus	91061|Bacilli	S	Glycosyl Hydrolase Family 88	-	-	3.2.1.172	ko:K15532	-	-	-	-	ko00000,ko01000	-	GH105	-	Glyco_hydro_88
PHALIAPI_00723	224308.BSU07010	0.0	1464.0	COG2207@1|root,COG2207@2|Bacteria,1TTA3@1239|Firmicutes,4HEIT@91061|Bacilli,1ZD14@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yesS	GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009438,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019243,GO:0019249,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0051596,GO:0061727,GO:0071704,GO:0072330,GO:1901575,GO:1901576,GO:1901615,GO:1901617	-	-	-	-	-	-	-	-	-	-	HTH_18,dCache_1
PHALIAPI_00724	224308.BSU07020	1.9e-166	465.0	COG2755@1|root,COG2755@2|Bacteria,1V2SC@1239|Firmicutes,4HHCC@91061|Bacilli,1ZEN8@1386|Bacillus	91061|Bacilli	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
PHALIAPI_00725	224308.BSU07030	7.52e-165	460.0	29765@1|root,2ZUE2@2|Bacteria,1V4EN@1239|Firmicutes,4HH0R@91061|Bacilli,1ZDUY@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF1961)	yesU	-	-	-	-	-	-	-	-	-	-	-	DUF1961
PHALIAPI_00726	224308.BSU07040	1.64e-144	407.0	COG5578@1|root,COG5578@2|Bacteria,1V69Y@1239|Firmicutes,4I499@91061|Bacilli,1ZFT5@1386|Bacillus	91061|Bacilli	S	Protein of unknown function, DUF624	-	-	-	-	-	-	-	-	-	-	-	-	DUF624
PHALIAPI_00727	224308.BSU07050	0.0	1236.0	COG3401@1|root,COG3401@2|Bacteria,1TQR3@1239|Firmicutes,4HBSX@91061|Bacilli,1ZEBX@1386|Bacillus	91061|Bacilli	E	cell wall organization	-	-	4.2.2.23,4.2.2.24	ko:K18197,ko:K18198	-	-	-	-	ko00000,ko01000	-	PL11	-	FG-GAP,Lipase_GDSL_2,fn3
PHALIAPI_00728	224308.BSU07060	0.0	1216.0	COG3401@1|root,COG3401@2|Bacteria,1TQR3@1239|Firmicutes,4HBSX@91061|Bacilli,1ZEBX@1386|Bacillus	91061|Bacilli	E	cell wall organization	yesX	-	4.2.2.23,4.2.2.24	ko:K18197,ko:K18198	-	-	-	-	ko00000,ko01000	-	PL11	-	FG-GAP,Lipase_GDSL_2,fn3
PHALIAPI_00729	224308.BSU07070	2.15e-158	443.0	COG2755@1|root,COG2755@2|Bacteria,1V2SC@1239|Firmicutes,4IPY4@91061|Bacilli,1ZQND@1386|Bacillus	91061|Bacilli	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
PHALIAPI_00730	224308.BSU07080	0.0	1358.0	COG1874@1|root,COG1874@2|Bacteria,1VRKP@1239|Firmicutes,4HUMJ@91061|Bacilli,1ZFF3@1386|Bacillus	91061|Bacilli	G	beta-galactosidase activity	-	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_42,Glyco_hydro_42C,Glyco_hydro_42M,Lipase_GDSL_2
PHALIAPI_00731	224308.BSU07090	0.0	1753.0	28I2Y@1|root,2Z86X@2|Bacteria,1UYYK@1239|Firmicutes,4HEZF@91061|Bacilli,1ZES9@1386|Bacillus	91061|Bacilli	-	-	yetA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00732	224308.BSU07100	0.0	1001.0	COG1653@1|root,COG1653@2|Bacteria,1TRD0@1239|Firmicutes,4HA0M@91061|Bacilli,1ZE2D@1386|Bacillus	91061|Bacilli	G	Bacterial extracellular solute-binding protein	lplA	-	-	ko:K17318	ko02010,map02010	M00603	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.29,3.A.1.1.9	-	-	SBP_bac_1
PHALIAPI_00733	224308.BSU07110	2.78e-225	621.0	COG4209@1|root,COG4209@2|Bacteria,1TP33@1239|Firmicutes,4HATZ@91061|Bacilli,1ZAQ3@1386|Bacillus	91061|Bacilli	G	COG4209 ABC-type polysaccharide transport system, permease component	lplB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K17319	ko02010,map02010	M00603	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.29,3.A.1.1.9	-	-	BPD_transp_1
PHALIAPI_00734	224308.BSU07120	7.85e-209	577.0	COG0395@1|root,COG0395@2|Bacteria,1TS0D@1239|Firmicutes,4HA5Y@91061|Bacilli,1ZQ4V@1386|Bacillus	91061|Bacilli	G	Binding-protein-dependent transport system inner membrane component	-	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K17320	ko02010,map02010	M00603	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.29,3.A.1.1.9	-	-	BPD_transp_1
PHALIAPI_00735	224308.BSU07130	0.0	879.0	COG1486@1|root,COG1486@2|Bacteria,1TREJ@1239|Firmicutes,4HUZQ@91061|Bacilli,1ZEWX@1386|Bacillus	91061|Bacilli	G	Family 4 glycosyl hydrolase	-	-	3.2.1.22	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	-	R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091	RC00049,RC00059,RC00451	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_4,Glyco_hydro_4C
PHALIAPI_00736	224308.BSU07140	3.66e-157	441.0	COG2323@1|root,COG2323@2|Bacteria,1UYR2@1239|Firmicutes,4HFCN@91061|Bacilli,1ZFK2@1386|Bacillus	91061|Bacilli	S	membrane	yetF	-	-	-	-	-	-	-	-	-	-	-	DUF421
PHALIAPI_00737	224308.BSU07150	4.67e-73	219.0	COG2329@1|root,COG2329@2|Bacteria,1VBS6@1239|Firmicutes,4HKUG@91061|Bacilli,1ZHZ4@1386|Bacillus	91061|Bacilli	S	Antibiotic biosynthesis monooxygenase	yetG	-	1.14.99.48	ko:K07145	ko00860,ko01110,map00860,map01110	-	R10468,R10510	RC03185	ko00000,ko00001,ko01000	-	-	-	ABM
PHALIAPI_00738	224308.BSU07160	2.47e-85	251.0	COG0346@1|root,COG0346@2|Bacteria,1V4S3@1239|Firmicutes,4HIIR@91061|Bacilli,1ZGP1@1386|Bacillus	91061|Bacilli	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	yetH	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
PHALIAPI_00739	1051501.AYTL01000011_gene123	1.29e-44	152.0	2C860@1|root,32RKH@2|Bacteria,1VATE@1239|Firmicutes,4HMZP@91061|Bacilli,1ZHVD@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00740	1051501.AYTL01000011_gene124	3.59e-184	514.0	COG1366@1|root,COG1366@2|Bacteria,1V1QF@1239|Firmicutes,4HGBT@91061|Bacilli,1ZDJX@1386|Bacillus	91061|Bacilli	T	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)	-	-	-	ko:K17763	-	-	-	-	ko00000,ko03021	-	-	-	STAS
PHALIAPI_00741	224308.BSU07190	3.81e-28	101.0	COG5583@1|root,COG5583@2|Bacteria	2|Bacteria	S	Uncharacterized small protein (DUF2292)	yezD	-	-	-	-	-	-	-	-	-	-	-	DUF2292
PHALIAPI_00742	224308.BSU07200	2.55e-135	385.0	COG0670@1|root,COG0670@2|Bacteria,1V6RG@1239|Firmicutes,4HISH@91061|Bacilli,1ZCV6@1386|Bacillus	91061|Bacilli	S	Belongs to the BI1 family	yetJ	-	-	ko:K06890	-	-	-	-	ko00000	-	-	-	Bax1-I
PHALIAPI_00743	224308.BSU07230	3.91e-37	134.0	COG0654@1|root,COG0654@2|Bacteria,1VUA1@1239|Firmicutes,4HTBK@91061|Bacilli,1ZE9G@1386|Bacillus	91061|Bacilli	CH	FAD binding domain	yetM	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
PHALIAPI_00744	224308.BSU07240	1.75e-254	698.0	2CEJD@1|root,2Z81V@2|Bacteria,1UD9R@1239|Firmicutes,4HAPP@91061|Bacilli,1ZC32@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3900)	yetN	-	-	-	-	-	-	-	-	-	-	-	DUF3898,DUF3900
PHALIAPI_00745	224308.BSU07250	0.0	2104.0	COG0369@1|root,COG2124@1|root,COG0369@2|Bacteria,COG2124@2|Bacteria,1TS1E@1239|Firmicutes,4HCWS@91061|Bacilli,1ZQAP@1386|Bacillus	91061|Bacilli	C	Belongs to the cytochrome P450 family	cypD	GO:0000166,GO:0003674,GO:0003824,GO:0003958,GO:0004497,GO:0005488,GO:0005504,GO:0005506,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008289,GO:0009987,GO:0010181,GO:0016491,GO:0016651,GO:0016653,GO:0016705,GO:0016712,GO:0019395,GO:0019752,GO:0020037,GO:0030258,GO:0031406,GO:0032553,GO:0032787,GO:0033293,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363	1.14.14.1,1.6.2.4	ko:K14338	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	-	R03629,R04121,R05259	RC00046,RC01311	ko00000,ko00001,ko00199,ko01000	-	-	-	FAD_binding_1,Flavodoxin_1,NAD_binding_1,p450
PHALIAPI_00746	224308.BSU07260	0.0	1267.0	COG1368@1|root,COG1368@2|Bacteria,1TRMA@1239|Firmicutes,4H9S0@91061|Bacilli,1ZBBV@1386|Bacillus	91061|Bacilli	M	Belongs to the LTA synthase family	ltaS	GO:0005575,GO:0005576	2.7.8.20	ko:K19005	ko00561,ko01100,map00561,map01100	-	R05081,R10849	RC00017	ko00000,ko00001,ko01000	-	-	-	Sulfatase
PHALIAPI_00747	224308.BSU07270	8.42e-188	521.0	COG1208@1|root,COG1208@2|Bacteria,1TT1F@1239|Firmicutes,4HUVJ@91061|Bacilli,1ZQJC@1386|Bacillus	91061|Bacilli	JM	Nucleotidyl transferase	yfnH	-	2.7.7.33	ko:K00978	ko00500,ko00520,ko01100,map00500,map00520,map01100	-	R00956	RC00002	ko00000,ko00001,ko01000	-	-	-	NTP_transferase
PHALIAPI_00748	224308.BSU07280	4.79e-220	607.0	COG0451@1|root,COG0451@2|Bacteria,1VP6I@1239|Firmicutes,4ISWU@91061|Bacilli,1ZFBK@1386|Bacillus	91061|Bacilli	M	dehydratase	yfnG	-	4.2.1.45,4.2.1.46	ko:K01709,ko:K01710	ko00520,ko00521,ko00523,ko00525,ko01055,ko01130,map00520,map00521,map00523,map00525,map01055,map01130	M00793	R02426,R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
PHALIAPI_00749	224308.BSU07290	1.62e-230	633.0	COG1442@1|root,COG1442@2|Bacteria,1VS6N@1239|Firmicutes,4HUAY@91061|Bacilli,1ZRVS@1386|Bacillus	91061|Bacilli	M	Nucleotide-diphospho-sugar transferase	yfnF	-	-	-	-	-	-	-	-	-	-	-	Nucleotid_trans
PHALIAPI_00750	224308.BSU07300	5.74e-285	778.0	COG1216@1|root,COG1216@2|Bacteria,1VDP9@1239|Firmicutes,4IPY5@91061|Bacilli,1ZREN@1386|Bacillus	91061|Bacilli	S	Glycosyltransferase like family 2	yfnE	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
PHALIAPI_00751	224308.BSU07310	3.88e-242	663.0	COG1442@1|root,COG1442@2|Bacteria,1UZ8Q@1239|Firmicutes,4HURC@91061|Bacilli,1ZF68@1386|Bacillus	91061|Bacilli	M	Nucleotide-diphospho-sugar transferase	yfnD	-	-	-	-	-	-	-	-	-	-	-	Nucleotid_trans
PHALIAPI_00752	224308.BSU07320	5.94e-266	731.0	COG2223@1|root,COG2223@2|Bacteria,1TPTN@1239|Firmicutes,4HA7C@91061|Bacilli,1ZB21@1386|Bacillus	91061|Bacilli	P	COG0477 Permeases of the major facilitator superfamily	fsr	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K08223	-	-	-	-	ko00000,ko02000	2.A.1.35	-	-	MFS_1
PHALIAPI_00753	224308.BSU07330	1.56e-169	473.0	COG1011@1|root,COG1011@2|Bacteria,1TWM7@1239|Firmicutes,4HEXU@91061|Bacilli,1ZE98@1386|Bacillus	91061|Bacilli	S	Haloacid dehalogenase-like hydrolase	yfnB	-	3.8.1.2	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
PHALIAPI_00754	224308.BSU07340	2.4e-312	853.0	COG0531@1|root,COG0531@2|Bacteria,1TQ4K@1239|Firmicutes,4HA66@91061|Bacilli,1ZBB0@1386|Bacillus	91061|Bacilli	E	amino acid	yfnA	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
PHALIAPI_00755	224308.BSU07350	0.0	964.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4H9MF@91061|Bacilli,1ZAXK@1386|Bacillus	91061|Bacilli	C	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively	yfmT	GO:0003674,GO:0003824,GO:0004029,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0018479,GO:0055114	1.2.1.3,1.2.1.67	ko:K00128,ko:K21802	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00627,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00627,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R05699,R06366,R08146	RC00047,RC00071,RC00075,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU38830	Aldedh
PHALIAPI_00756	224308.BSU07360	5.14e-161	456.0	COG0840@1|root,COG0840@2|Bacteria,1V8NI@1239|Firmicutes,4HAGI@91061|Bacilli,1ZDCZ@1386|Bacillus	91061|Bacilli	NT	chemotaxis protein	yfmS	-	-	-	-	-	-	-	-	-	-	-	MCPsignal
PHALIAPI_00757	224308.BSU07370	0.0	1205.0	COG0488@1|root,COG0488@2|Bacteria,1TPAX@1239|Firmicutes,4H9TK@91061|Bacilli,1ZBTF@1386|Bacillus	91061|Bacilli	S	COG0488 ATPase components of ABC transporters with duplicated ATPase domains	yfmR	-	-	ko:K15738	-	-	-	-	ko00000,ko02000	3.A.1.120.6	-	-	ABC_tran,ABC_tran_CTD,ABC_tran_Xtn
PHALIAPI_00758	224308.BSU07380	9.21e-99	287.0	2BT7F@1|root,32NCS@2|Bacteria,1V7YX@1239|Firmicutes,4HJIR@91061|Bacilli,1ZH1S@1386|Bacillus	91061|Bacilli	S	Uncharacterised protein from bacillus cereus group	yfmQ	-	-	-	-	-	-	-	-	-	-	-	YfmQ
PHALIAPI_00759	224308.BSU07390	3.54e-90	265.0	COG0789@1|root,COG0789@2|Bacteria,1VBDA@1239|Firmicutes,4HMS4@91061|Bacilli,1ZIAJ@1386|Bacillus	91061|Bacilli	K	transcriptional	yfmP	-	-	ko:K21902	-	-	-	-	ko00000,ko03000	-	-	-	MerR_1
PHALIAPI_00760	224308.BSU07400	2.95e-264	726.0	COG0477@1|root,COG2814@2|Bacteria,1TRRB@1239|Firmicutes,4HAUF@91061|Bacilli,1ZDMB@1386|Bacillus	91061|Bacilli	EGP	Major facilitator superfamily	yfmO	-	-	ko:K08221	-	-	-	-	ko00000,ko02000	2.A.1.32	-	-	MFS_1
PHALIAPI_00761	1051501.AYTL01000011_gene148	6.88e-11	61.6	COG0454@1|root,COG0456@2|Bacteria,1V2FB@1239|Firmicutes,4HFUN@91061|Bacilli,1ZFIM@1386|Bacillus	91061|Bacilli	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	yhfO	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_4
PHALIAPI_00762	1051501.AYTL01000011_gene149	3.63e-95	278.0	2F25R@1|root,33V44@2|Bacteria,1VVA1@1239|Firmicutes,4HVY4@91061|Bacilli,1ZHAM@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00763	224308.BSU07420	0.0	1014.0	COG0488@1|root,COG0488@2|Bacteria,1TPAX@1239|Firmicutes,4HC58@91061|Bacilli,1ZB1Y@1386|Bacillus	91061|Bacilli	S	COG0488 ATPase components of ABC transporters with duplicated ATPase domains	yheS_1	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
PHALIAPI_00764	224308.BSU07430	7.25e-264	723.0	COG0513@1|root,COG0513@2|Bacteria,1TQ9R@1239|Firmicutes,4HANR@91061|Bacilli,1ZC9I@1386|Bacillus	91061|Bacilli	L	COG0513 Superfamily II DNA and RNA helicases	yfmL	GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360	-	-	-	-	-	-	-	-	-	-	DEAD,Helicase_C
PHALIAPI_00765	1051501.AYTL01000011_gene152	2.44e-94	276.0	COG0454@1|root,COG0456@2|Bacteria	2|Bacteria	K	acetyltransferase	yfmK	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_1,Acetyltransf_10,Acetyltransf_3
PHALIAPI_00766	224308.BSU07450	1.92e-238	656.0	COG2130@1|root,COG2130@2|Bacteria,1TQUE@1239|Firmicutes,4HCHY@91061|Bacilli,1ZC4N@1386|Bacillus	91061|Bacilli	S	N-terminal domain of oxidoreductase	yfmJ	-	-	ko:K07119	-	-	-	-	ko00000	-	-	-	ADH_N_2,ADH_zinc_N
PHALIAPI_00767	224308.BSU07490	5.69e-192	532.0	COG1120@1|root,COG1120@2|Bacteria,1TP2Q@1239|Firmicutes,4HADG@91061|Bacilli,1ZEBC@1386|Bacillus	91061|Bacilli	P	ATPases associated with a variety of cellular activities	fhuC	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
PHALIAPI_00768	224308.BSU07500	2.1e-223	617.0	COG0609@1|root,COG0609@2|Bacteria,1TPX6@1239|Firmicutes,4HAM8@91061|Bacilli,1ZD7X@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	fecD	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	iYO844.BSU07500	FecCD
PHALIAPI_00769	224308.BSU07510	4.72e-220	609.0	COG0609@1|root,COG0609@2|Bacteria,1UC21@1239|Firmicutes,4HDZP@91061|Bacilli,1ZF51@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	-	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
PHALIAPI_00770	224308.BSU07520	7.91e-219	604.0	COG4594@1|root,COG4594@2|Bacteria,1U1RC@1239|Firmicutes,4HEP3@91061|Bacilli,1ZEMX@1386|Bacillus	91061|Bacilli	P	COG4594 ABC-type Fe3 -citrate transport system, periplasmic component	yfmC	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	iYO844.BSU07520	Peripla_BP_2
PHALIAPI_00771	1274524.BSONL12_06998	1.5e-31	115.0	29RI0@1|root,30CKZ@2|Bacteria,1UA2M@1239|Firmicutes,4IKC0@91061|Bacilli,1ZGDW@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3212)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3212
PHALIAPI_00772	224308.BSU07550	6.96e-76	226.0	2DJ0G@1|root,32UC2@2|Bacteria,1VCTC@1239|Firmicutes,4HKM5@91061|Bacilli,1ZHWS@1386|Bacillus	91061|Bacilli	S	Heat induced stress protein YflT	yflT	-	-	-	-	-	-	-	-	-	-	-	YflT
PHALIAPI_00773	224308.BSU07560	1.42e-306	835.0	COG3866@1|root,COG3866@2|Bacteria,1U9EG@1239|Firmicutes,4HEBZ@91061|Bacilli,1ZE00@1386|Bacillus	91061|Bacilli	G	Pectate lyase	pel	-	4.2.2.2	ko:K01728	ko00040,ko02024,map00040,map02024	-	R02361,R06240	RC00049,RC00705	ko00000,ko00001,ko01000	-	-	-	Pec_lyase_C
PHALIAPI_00774	224308.BSU07570	0.0	877.0	COG0471@1|root,COG0471@2|Bacteria,1TSGE@1239|Firmicutes,4HDE4@91061|Bacilli,1ZC2I@1386|Bacillus	91061|Bacilli	P	Sodium:sulfate symporter transmembrane region	yflS	-	-	ko:K03319	-	-	-	-	ko00000	2.A.47	-	-	Na_sulph_symp
PHALIAPI_00775	224308.BSU07580	0.0	1012.0	COG3290@1|root,COG3290@2|Bacteria,1TQJR@1239|Firmicutes,4H9Q0@91061|Bacilli,1ZBHV@1386|Bacillus	91061|Bacilli	T	Signal transduction histidine kinase regulating citrate malate metabolism	citS	-	2.7.13.3	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	M00487,M00489,M00490	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,PAS,PAS_9,SPOB_a,sCache_3_2
PHALIAPI_00776	224308.BSU07590	1.61e-153	432.0	COG4565@1|root,COG4565@2|Bacteria,1V1D7@1239|Firmicutes,4HFWB@91061|Bacilli,1ZFEC@1386|Bacillus	91061|Bacilli	T	response regulator	citT	-	-	ko:K11638	ko02020,map02020	M00487	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	CitT,HTH_11,Response_reg
PHALIAPI_00777	224308.BSU07600	9e-227	625.0	COG3181@1|root,COG3181@2|Bacteria,1V0HH@1239|Firmicutes,4HBWA@91061|Bacilli,1ZB42@1386|Bacillus	91061|Bacilli	S	Tripartite tricarboxylate transporter family receptor	yflP	-	-	-	-	-	-	-	-	-	-	-	TctC
PHALIAPI_00778	224308.BSU07610	5.35e-288	789.0	COG2851@1|root,COG2851@2|Bacteria,1TQQH@1239|Firmicutes,4HAGT@91061|Bacilli,1ZFH7@1386|Bacillus	91061|Bacilli	C	Citrate transporter	citM	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0034220,GO:0044425,GO:0051179,GO:0051234,GO:0055085,GO:0098656	-	ko:K03300,ko:K11639	ko02020,map02020	-	-	-	ko00000,ko00001	2.A.11,2.A.11.1.1	-	-	CitMHS
PHALIAPI_00779	224308.BSU07620	1.7e-192	533.0	COG0491@1|root,COG0491@2|Bacteria,1TQGU@1239|Firmicutes,4HBJ3@91061|Bacilli,1ZB0U@1386|Bacillus	91061|Bacilli	S	COG0491 Zn-dependent hydrolases, including glyoxylases	yflN	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
PHALIAPI_00780	224308.BSU07630	3.94e-275	751.0	COG4362@1|root,COG4362@2|Bacteria,1TRDM@1239|Firmicutes,4HAR0@91061|Bacilli,1ZB33@1386|Bacillus	91061|Bacilli	C	Belongs to the NOS family. Bacterial NOS oxygenase subfamily	nos	GO:0001505,GO:0003674,GO:0003824,GO:0004497,GO:0004517,GO:0006807,GO:0006809,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016705,GO:0016709,GO:0017144,GO:0034641,GO:0042133,GO:0042136,GO:0044237,GO:0044249,GO:0044271,GO:0046209,GO:0055114,GO:0065007,GO:0065008,GO:0072593,GO:1903409,GO:2001057	1.14.14.47	ko:K00491	ko00220,ko00330,ko01100,ko01110,map00220,map00330,map01100,map01110	-	R11711,R11712,R11713	RC00177,RC00330,RC01044	ko00000,ko00001,ko01000	-	-	-	NO_synthase
PHALIAPI_00781	224308.BSU07640	4.94e-58	179.0	COG1254@1|root,COG1254@2|Bacteria,1VEM9@1239|Firmicutes,4HNN7@91061|Bacilli,1ZITT@1386|Bacillus	91061|Bacilli	C	Belongs to the acylphosphatase family	acyP	GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818	3.6.1.7	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	-	R00317,R01421,R01515	RC00043	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS07020	Acylphosphatase
PHALIAPI_00782	224308.BSU07650	3.42e-157	441.0	COG2258@1|root,COG2258@2|Bacteria,1UB2C@1239|Firmicutes,4HB26@91061|Bacilli,1ZCRA@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yflK	-	-	-	-	-	-	-	-	-	-	-	3-alpha,MOSC
PHALIAPI_00783	224308.BSU07660	3.16e-25	93.6	2EG6C@1|root,339Y6@2|Bacteria,1VPY7@1239|Firmicutes,4HRNE@91061|Bacilli,1ZK0I@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2639)	yflJ	-	-	-	-	-	-	-	-	-	-	-	DUF2639
PHALIAPI_00784	224308.BSU07670	6.9e-27	98.2	29SE6@1|root,30DIX@2|Bacteria,1UBC7@1239|Firmicutes,4IMR3@91061|Bacilli,1ZKN8@1386|Bacillus	91061|Bacilli	-	-	yflI	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00785	224308.BSU07680	2.1e-65	199.0	2DB6C@1|root,32TWU@2|Bacteria,1VC4Z@1239|Firmicutes,4HKEX@91061|Bacilli,1ZGUZ@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3243)	yflH	-	-	-	-	-	-	-	-	-	-	-	DUF3243
PHALIAPI_00786	224308.BSU07690	1.14e-178	497.0	COG0024@1|root,COG0024@2|Bacteria,1TQC1@1239|Firmicutes,4H9S9@91061|Bacilli,1ZCVZ@1386|Bacillus	91061|Bacilli	E	Methionine aminopeptidase	yflG	-	3.4.11.18	ko:K01265	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M24
PHALIAPI_00787	224308.BSU07700	0.0	870.0	COG1263@1|root,COG1264@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,1TPJ8@1239|Firmicutes,4HA8X@91061|Bacilli,1ZAZ3@1386|Bacillus	91061|Bacilli	G	COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific	nagE	-	2.7.1.193,2.7.1.199	ko:K02802,ko:K02803,ko:K02804,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	M00267,M00809	R02738,R05199	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.13,4.A.1.1.14,4.A.1.1.15,4.A.1.1.2,4.A.1.1.5,4.A.1.1.7,4.A.1.1.9	-	-	PTS_EIIA_1,PTS_EIIB,PTS_EIIC
PHALIAPI_00788	224308.BSU07710	0.0	1272.0	COG1368@1|root,COG1368@2|Bacteria,1TRMA@1239|Firmicutes,4H9S0@91061|Bacilli,1ZBBV@1386|Bacillus	91061|Bacilli	M	Belongs to the LTA synthase family	yflE	GO:0005575,GO:0005576	2.7.8.20	ko:K19005	ko00561,ko01100,map00561,map01100	-	R05081,R10849	RC00017	ko00000,ko00001,ko01000	-	-	-	Sulfatase
PHALIAPI_00789	224308.BSU07735	1.89e-87	257.0	2D7FD@1|root,32TNY@2|Bacteria,1VADP@1239|Firmicutes,4HKCW@91061|Bacilli,1ZI9Y@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF1992)	ydhN1	-	-	-	-	-	-	-	-	-	-	-	DUF1992
PHALIAPI_00790	224308.BSU07750	0.0	874.0	COG1115@1|root,COG1115@2|Bacteria,1TNZP@1239|Firmicutes,4H9SZ@91061|Bacilli,1ZAX7@1386|Bacillus	91061|Bacilli	E	Sodium alanine symporter	yflA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03310	-	-	-	-	ko00000	2.A.25	-	-	Na_Ala_symp
PHALIAPI_00791	224308.BSU07760	4.42e-249	684.0	COG0531@1|root,COG0531@2|Bacteria,1TSIB@1239|Firmicutes,4ISWV@91061|Bacilli,1ZEKN@1386|Bacillus	91061|Bacilli	E	Spore germination protein	yfkT	-	-	ko:K06309	-	-	-	-	ko00000	-	-	-	Spore_permease
PHALIAPI_00793	224308.BSU07780	1.08e-269	739.0	2DBJR@1|root,2Z9N7@2|Bacteria,1TRSN@1239|Firmicutes,4HCDI@91061|Bacilli,1ZDF7@1386|Bacillus	91061|Bacilli	S	spore germination	yfkR	-	-	ko:K06297,ko:K06308	-	-	-	-	ko00000	-	-	-	Spore_GerAC
PHALIAPI_00794	224308.BSU07790	0.0	975.0	COG0697@1|root,COG0697@2|Bacteria,1TP7K@1239|Firmicutes,4HAH1@91061|Bacilli,1ZBEF@1386|Bacillus	91061|Bacilli	EG	Spore germination protein	yfkQ	-	-	ko:K06295,ko:K06307	-	-	-	-	ko00000	-	-	-	GerA
PHALIAPI_00795	224308.BSU07800	0.0	895.0	COG1263@1|root,COG1264@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,1TP5X@1239|Firmicutes,4HA0I@91061|Bacilli,1ZB5X@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	treP	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0015766,GO:0015771,GO:0015772,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563,GO:0090589	2.7.1.201	ko:K02818,ko:K02819	ko00500,ko02060,map00500,map02060	M00270	R02780	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.2.13,4.A.1.2.4,4.A.1.2.8	-	iYO844.BSU07800	PTS_EIIA_1,PTS_EIIB,PTS_EIIC
PHALIAPI_00796	224308.BSU07810	0.0	1175.0	COG0366@1|root,COG0366@2|Bacteria,1TP53@1239|Firmicutes,4HA1G@91061|Bacilli,1ZASC@1386|Bacillus	91061|Bacilli	G	COG0366 Glycosidases	treC	-	3.2.1.93	ko:K01226	ko00500,map00500	-	R00837,R06113	RC00049	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,DUF3459,Malt_amylase_C
PHALIAPI_00797	224308.BSU07820	1.24e-172	481.0	COG2188@1|root,COG2188@2|Bacteria,1TRF6@1239|Firmicutes,4HDCX@91061|Bacilli,1ZATF@1386|Bacillus	91061|Bacilli	K	transcriptional	treR	-	-	ko:K03486	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
PHALIAPI_00798	224308.BSU07830	6.16e-160	447.0	COG0778@1|root,COG0778@2|Bacteria,1V1PI@1239|Firmicutes,4HB7V@91061|Bacilli,1ZBI6@1386|Bacillus	91061|Bacilli	C	nitroreductase	frp	-	-	-	-	-	-	-	-	-	-	iYO844.BSU07830	Nitroreductase
PHALIAPI_00799	224308.BSU07840	0.0	2797.0	COG0737@1|root,COG0737@2|Bacteria,1TPV2@1239|Firmicutes,4HB9S@91061|Bacilli,1ZAY0@1386|Bacillus	91061|Bacilli	F	Belongs to the 5'-nucleotidase family	yfkN	-	3.1.3.5,3.1.3.6,3.1.4.16,3.6.1.45	ko:K01081,ko:K01119,ko:K06931,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01562,R01569,R01664,R01877,R01968,R02088,R02102,R02148,R02323,R02370,R02719,R03346,R03537,R03538,R03929,R05135	RC00017,RC00078,RC00296	ko00000,ko00001,ko01000	-	-	iYO844.BSU07840	5_nucleotid_C,CBM_5_12,Metallophos,SLH
PHALIAPI_00800	224308.BSU07850	3.7e-112	323.0	COG0693@1|root,COG0693@2|Bacteria,1V3I7@1239|Firmicutes,4HFNG@91061|Bacilli,1ZFMH@1386|Bacillus	91061|Bacilli	S	protease	yfkM	-	3.5.1.124	ko:K05520	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DJ-1_PfpI
PHALIAPI_00801	224308.BSU07860	5.72e-263	723.0	COG0477@1|root,COG2814@2|Bacteria,1VNR0@1239|Firmicutes,4ISCF@91061|Bacilli,1ZCMD@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	ydiN3	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
PHALIAPI_00802	224308.BSU07870	5.99e-41	135.0	COG4840@1|root,COG4840@2|Bacteria,1VEYR@1239|Firmicutes,4HNKK@91061|Bacilli,1ZJ0U@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0435 family	yfkK	-	-	-	-	-	-	-	-	-	-	-	DUF1128
PHALIAPI_00803	224308.BSU07880	4.15e-108	311.0	COG0394@1|root,COG0394@2|Bacteria,1V6SG@1239|Firmicutes,4HIZN@91061|Bacilli,1ZG7W@1386|Bacillus	91061|Bacilli	T	Belongs to the low molecular weight phosphotyrosine protein phosphatase family	yfkJ	-	3.1.3.48	ko:K01104	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
PHALIAPI_00804	224308.BSU07890	1.03e-66	202.0	COG4980@1|root,COG4980@2|Bacteria,1VGY5@1239|Firmicutes,4HPNI@91061|Bacilli,1ZIVN@1386|Bacillus	91061|Bacilli	S	gas vesicle protein	yfkI	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00805	224308.BSU07900	9.64e-184	512.0	COG1295@1|root,COG1295@2|Bacteria,1U7HM@1239|Firmicutes,4H9MJ@91061|Bacilli,1ZCAD@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0761 family	yihY	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
PHALIAPI_00806	935837.JAEK01000038_gene2870	1.64e-12	60.8	29S58@1|root,30D9S@2|Bacteria,1UB1M@1239|Firmicutes,4IMEH@91061|Bacilli,1ZJYU@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00807	224308.BSU07910	2.22e-277	759.0	COG0477@1|root,COG0477@2|Bacteria,1UIJV@1239|Firmicutes,4ISKN@91061|Bacilli,1ZS6S@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	yfkF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_1_like
PHALIAPI_00808	224308.BSU07920	1.34e-235	650.0	COG0387@1|root,COG0387@2|Bacteria,1TQN2@1239|Firmicutes,4HB3X@91061|Bacilli,1ZC9V@1386|Bacillus	91061|Bacilli	P	COG0387 Ca2 H antiporter	cax	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015085,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015368,GO:0015369,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051139,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600	-	ko:K07300	-	-	-	-	ko00000,ko02000	2.A.19	-	-	Na_Ca_ex
PHALIAPI_00809	224308.BSU07930	3.69e-189	525.0	28IN6@1|root,2Z8NK@2|Bacteria,1TR7N@1239|Firmicutes,4HBDQ@91061|Bacilli,1ZBTH@1386|Bacillus	91061|Bacilli	S	YfkD-like protein	yfkD	-	-	-	-	-	-	-	-	-	-	-	YfkD
PHALIAPI_00810	224308.BSU07940	4.44e-191	531.0	COG0668@1|root,COG0668@2|Bacteria,1V16H@1239|Firmicutes,4HAP1@91061|Bacilli,1ZEMM@1386|Bacillus	91061|Bacilli	M	Mechanosensitive ion channel	yfkC	GO:0003674,GO:0005215,GO:0006810,GO:0006950,GO:0006970,GO:0008150,GO:0008381,GO:0009628,GO:0009987,GO:0015267,GO:0022803,GO:0022836,GO:0022857,GO:0033554,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071214,GO:0071470,GO:0104004	-	-	-	-	-	-	-	-	-	-	MS_channel
PHALIAPI_00811	224308.BSU07955	1.76e-283	773.0	COG0535@1|root,COG0535@2|Bacteria,1TRC8@1239|Firmicutes,4HA9Q@91061|Bacilli,1ZAVK@1386|Bacillus	91061|Bacilli	S	YfkB-like domain	yfkA	-	-	-	-	-	-	-	-	-	-	-	Fer4_12,Fer4_14,Radical_SAM,YfkB
PHALIAPI_00812	224308.BSU07970	3.26e-36	122.0	2CEJ8@1|root,33H3W@2|Bacteria,1VMMF@1239|Firmicutes,4HRK8@91061|Bacilli,1ZIWC@1386|Bacillus	91061|Bacilli	-	-	yfjT	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00813	224308.BSU07980	1.71e-196	543.0	COG0726@1|root,COG0726@2|Bacteria,1TT1X@1239|Firmicutes,4HAQI@91061|Bacilli,1ZBYP@1386|Bacillus	91061|Bacilli	G	deacetylase	pdaA	GO:0005575,GO:0016020	-	ko:K01567	-	-	-	-	ko00000,ko01000	-	-	-	Polysacc_deac_1
PHALIAPI_00814	224308.BSU07990	1.88e-191	533.0	COG2084@1|root,COG2084@2|Bacteria,1VS8P@1239|Firmicutes,4HTTT@91061|Bacilli,1ZFJJ@1386|Bacillus	91061|Bacilli	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	yfjR	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_11,NAD_binding_2
PHALIAPI_00815	224308.BSU08000	7.8e-237	650.0	COG0598@1|root,COG0598@2|Bacteria,1TPSV@1239|Firmicutes,4HAPC@91061|Bacilli,1ZBVW@1386|Bacillus	91061|Bacilli	P	Mediates influx of magnesium ions	corA	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	iYO844.BSU08000	CorA
PHALIAPI_00816	224308.BSU08010	1.94e-214	591.0	COG0122@1|root,COG0122@2|Bacteria,1TQAF@1239|Firmicutes,4HBYM@91061|Bacilli,1ZCV5@1386|Bacillus	91061|Bacilli	L	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase	yfjP	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003905,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008725,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0032131,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0043733,GO:0043916,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363	3.2.2.21	ko:K01247	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HhH-GPD
PHALIAPI_00817	224308.BSU08020	0.0	925.0	COG2265@1|root,COG2265@2|Bacteria,1TP4H@1239|Firmicutes,4HA6M@91061|Bacilli,1ZD4Q@1386|Bacillus	91061|Bacilli	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	rumA_1	-	2.1.1.190,2.1.1.35	ko:K00557,ko:K03215	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	TRAM,tRNA_U5-meth_tr
PHALIAPI_00818	326423.RBAM_008270	8.71e-59	182.0	2CV5Q@1|root,32SWW@2|Bacteria,1VCMQ@1239|Firmicutes,4HNDT@91061|Bacilli,1ZK4J@1386|Bacillus	91061|Bacilli	S	YfzA-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YfzA
PHALIAPI_00819	224308.BSU08030	1.77e-236	650.0	COG0042@1|root,COG0042@2|Bacteria,1TQ2R@1239|Firmicutes,4HA9K@91061|Bacilli,1ZBSF@1386|Bacillus	91061|Bacilli	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	yfjN	-	-	-	-	-	-	-	-	-	-	-	Dus
PHALIAPI_00820	224308.BSU08040	2.25e-109	314.0	COG4637@1|root,COG4637@2|Bacteria,1VB13@1239|Firmicutes,4HMQY@91061|Bacilli,1ZHPM@1386|Bacillus	91061|Bacilli	S	Psort location Cytoplasmic, score	yfjM	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00822	224308.BSU08060	1.36e-244	671.0	COG1071@1|root,COG1071@2|Bacteria,1TQDG@1239|Firmicutes,4HBEA@91061|Bacilli,1ZAY4@1386|Bacillus	91061|Bacilli	C	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit	acoA	-	-	ko:K21416	-	-	-	-	ko00000,ko01000	-	-	-	E1_dh
PHALIAPI_00823	224308.BSU08070	4.56e-243	668.0	COG0022@1|root,COG0022@2|Bacteria,1TP3J@1239|Firmicutes,4HAP6@91061|Bacilli,1ZE4V@1386|Bacillus	91061|Bacilli	C	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit	acoB	-	-	ko:K21417	-	-	-	-	ko00000,ko01000	-	-	-	Transket_pyr,Transketolase_C
PHALIAPI_00824	224308.BSU08080	1.28e-259	714.0	COG0508@1|root,COG0508@2|Bacteria,1TR5N@1239|Firmicutes,4HDFT@91061|Bacilli,1ZB6D@1386|Bacillus	91061|Bacilli	C	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	acoC	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
PHALIAPI_00825	224308.BSU08090	0.0	877.0	COG1249@1|root,COG1249@2|Bacteria,1TP1W@1239|Firmicutes,4H9Z5@91061|Bacilli,1ZCM1@1386|Bacillus	91061|Bacilli	C	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes	acoL	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
PHALIAPI_00826	224308.BSU08100	0.0	1186.0	COG3284@1|root,COG3284@2|Bacteria,1VHQN@1239|Firmicutes,4HUF7@91061|Bacilli,1ZS1R@1386|Bacillus	91061|Bacilli	KQ	COG3284 Transcriptional activator of acetoin glycerol metabolism	acoR	-	-	ko:K21405	-	-	-	-	ko00000,ko03000	-	-	-	GAF,HTH_8,Sigma54_activat
PHALIAPI_00827	224308.BSU08110	2.26e-33	115.0	2EH2H@1|root,33AUF@2|Bacteria,1VKXK@1239|Firmicutes,4HRIP@91061|Bacilli,1ZKGU@1386|Bacillus	91061|Bacilli	S	Belongs to the SspH family	sspH	-	-	ko:K06425	-	-	-	-	ko00000	-	-	-	SspH
PHALIAPI_00828	224308.BSU08120	1.05e-74	223.0	COG1742@1|root,COG1742@2|Bacteria,1V6YJ@1239|Firmicutes,4HIIY@91061|Bacilli,1ZHH6@1386|Bacillus	91061|Bacilli	S	UPF0060 membrane protein	yfjF	-	-	ko:K09771	-	-	-	-	ko00000,ko02000	2.A.7.26	-	-	UPF0060
PHALIAPI_00829	224308.BSU08140	1.49e-131	373.0	2BHJ4@1|root,31I9E@2|Bacteria,1UAQF@1239|Firmicutes,4IM33@91061|Bacilli,1ZIZ0@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5381)	yfjD	-	-	-	-	-	-	-	-	-	-	-	DUF5381
PHALIAPI_00830	224308.BSU08150	1.45e-184	513.0	295F9@1|root,2ZST0@2|Bacteria,1W1TU@1239|Firmicutes,4I211@91061|Bacilli,1ZEWR@1386|Bacillus	91061|Bacilli	-	-	yfjC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00831	224308.BSU08160	5.56e-270	741.0	2B6C6@1|root,31Z9T@2|Bacteria,1U9MI@1239|Firmicutes,4IJSZ@91061|Bacilli,1ZE74@1386|Bacillus	91061|Bacilli	-	-	yfjB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00832	224308.BSU08170	5.59e-61	188.0	COG4842@1|root,COG4842@2|Bacteria,1UAGF@1239|Firmicutes,4IKUW@91061|Bacilli,1ZHQG@1386|Bacillus	91061|Bacilli	S	Belongs to the WXG100 family	yfjA	-	-	-	-	-	-	-	-	-	-	-	WXG100
PHALIAPI_00833	224308.BSU08180	0.0	903.0	COG1486@1|root,COG1486@2|Bacteria,1TQ9I@1239|Firmicutes,4H9TM@91061|Bacilli,1ZQT2@1386|Bacillus	91061|Bacilli	G	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases	malH	-	3.2.1.122	ko:K01232	ko00500,map00500	-	R00837,R00838,R06113	RC00049	ko00000,ko00001,ko01000	-	GH4	-	Glyco_hydro_4,Glyco_hydro_4C
PHALIAPI_00834	224308.BSU08190	3.03e-181	504.0	COG1737@1|root,COG1737@2|Bacteria,1V1PK@1239|Firmicutes,4HNF6@91061|Bacilli,1ZHAE@1386|Bacillus	91061|Bacilli	K	Helix-turn-helix domain, rpiR family	-	GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	ko:K03481	-	-	-	-	ko00000,ko03000	-	-	-	HTH_6,SIS
PHALIAPI_00835	224308.BSU08200	0.0	1020.0	COG1263@1|root,COG1264@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,1TPJ8@1239|Firmicutes,4HA8X@91061|Bacilli,1ZC48@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	glvC	-	2.7.1.208	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	M00268	R04111	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.10,4.A.1.1.16,4.A.1.1.4,4.A.1.1.8	-	-	PTS_EIIB,PTS_EIIC
PHALIAPI_00836	224308.BSU08210	0.0	1056.0	COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4H9SC@91061|Bacilli,1ZBEE@1386|Bacillus	91061|Bacilli	V	ABC transporter	yfiB3	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
PHALIAPI_00837	224308.BSU08220	0.0	1129.0	COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4HA3S@91061|Bacilli,1ZBIW@1386|Bacillus	91061|Bacilli	V	COG1132 ABC-type multidrug transport system, ATPase and permease components	yfiC3	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
PHALIAPI_00838	224308.BSU08230	3.34e-83	246.0	COG2259@1|root,COG2259@2|Bacteria,1VCS2@1239|Firmicutes,4HKRK@91061|Bacilli,1ZHVA@1386|Bacillus	91061|Bacilli	S	DoxX	yfiD3	-	-	-	-	-	-	-	-	-	-	-	DoxX
PHALIAPI_00839	224308.BSU08240	6.99e-207	572.0	COG2514@1|root,COG2514@2|Bacteria,1TPRF@1239|Firmicutes,4HAE7@91061|Bacilli,1ZAQI@1386|Bacillus	91061|Bacilli	S	glyoxalase	yfiE	-	1.13.11.2	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	M00569	R00816,R04089,R05295,R05404,R05406,R07795	RC00387,RC00643,RC01075,RC01364,RC01914	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
PHALIAPI_00840	224308.BSU08290	1.97e-238	660.0	COG4585@1|root,COG4585@2|Bacteria,1TQI3@1239|Firmicutes,4HHFU@91061|Bacilli,1ZPX5@1386|Bacillus	91061|Bacilli	T	Histidine kinase	baeS	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
PHALIAPI_00841	224308.BSU08300	3.37e-143	405.0	COG2197@1|root,COG2197@2|Bacteria,1TRXG@1239|Firmicutes,4HHIC@91061|Bacilli,1ZC3A@1386|Bacillus	91061|Bacilli	KT	LuxR family transcriptional regulator	yfiK	-	-	ko:K02479	-	-	-	-	ko00000,ko02022	-	-	-	GerE,Response_reg
PHALIAPI_00842	224308.BSU08310	2.42e-211	585.0	COG1131@1|root,COG1131@2|Bacteria,1TPMQ@1239|Firmicutes,4HDH1@91061|Bacilli,1ZPYP@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	drrA	-	-	ko:K01990,ko:K09695	ko02010,map02010	M00252,M00254	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.102	-	-	ABC_tran
PHALIAPI_00843	224308.BSU08320	3.43e-263	723.0	COG0842@1|root,COG1511@1|root,COG0842@2|Bacteria,COG1511@2|Bacteria,1V8HM@1239|Firmicutes,4IPM5@91061|Bacilli,1ZRCG@1386|Bacillus	91061|Bacilli	V	ABC-2 family transporter protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
PHALIAPI_00844	224308.BSU08330	1.28e-257	708.0	COG0842@1|root,COG0842@2|Bacteria,1V7HN@1239|Firmicutes,4HGE5@91061|Bacilli,1ZCVY@1386|Bacillus	91061|Bacilli	V	COG0842 ABC-type multidrug transport system, permease component	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
PHALIAPI_00845	935837.JAEK01000019_gene761	1.47e-85	258.0	COG1670@1|root,COG1670@2|Bacteria,1V5BA@1239|Firmicutes,4HHR5@91061|Bacilli,1ZG8F@1386|Bacillus	91061|Bacilli	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
PHALIAPI_00846	224308.BSU08340	3.14e-127	362.0	COG1695@1|root,COG1695@2|Bacteria,1V6TJ@1239|Firmicutes,4HKXY@91061|Bacilli,1ZGRY@1386|Bacillus	91061|Bacilli	K	transcriptional	padR	-	-	-	-	-	-	-	-	-	-	-	PadR,Vir_act_alpha_C
PHALIAPI_00847	224308.BSU08350	7.87e-128	365.0	COG1075@1|root,COG1075@2|Bacteria,1VVU8@1239|Firmicutes,4HWN0@91061|Bacilli,1ZB57@1386|Bacillus	91061|Bacilli	S	acetyltransferases and hydrolases with the alpha beta hydrolase fold	lip	GO:0003674,GO:0003824,GO:0004806,GO:0005575,GO:0005576,GO:0016298,GO:0016787,GO:0016788,GO:0052689	3.1.1.3	ko:K01046	ko00561,ko01100,map00561,map01100	M00098	R02250,R02687	RC00020,RC00037,RC00041,RC00094	ko00000,ko00001,ko00002,ko01000	-	-	-	Lipase_2
PHALIAPI_00848	1382358.JHVN01000002_gene2380	9.72e-84	254.0	COG1309@1|root,COG1309@2|Bacteria,1V3R8@1239|Firmicutes,4HBEK@91061|Bacilli,21V3M@150247|Anoxybacillus	91061|Bacilli	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_00849	1395513.P343_05165	6.94e-76	234.0	COG0702@1|root,COG0702@2|Bacteria,1V6SK@1239|Firmicutes,4HK0Q@91061|Bacilli	91061|Bacilli	GM	NADH-flavin reductase	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
PHALIAPI_00850	265729.GS18_0218725	6.35e-111	333.0	COG0842@1|root,COG0842@2|Bacteria,1TQG7@1239|Firmicutes,4H9MK@91061|Bacilli,1ZAPY@1386|Bacillus	91061|Bacilli	V	COG0842 ABC-type multidrug transport system, permease component	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane,ABC2_membrane_3
PHALIAPI_00851	265729.GS18_0218720	2.11e-98	293.0	COG1131@1|root,COG1131@2|Bacteria,1TQKM@1239|Firmicutes,4HBUK@91061|Bacilli,1ZDAX@1386|Bacillus	91061|Bacilli	V	COG1131 ABC-type multidrug transport system, ATPase component	ybhF_2	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_00852	224308.BSU08360	1.77e-241	665.0	COG3936@1|root,COG3936@2|Bacteria,1V5V5@1239|Firmicutes,4HGCW@91061|Bacilli,1ZFFK@1386|Bacillus	91061|Bacilli	G	COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation	yfiQ	-	-	ko:K21462	-	-	-	-	ko00000	-	-	-	Acyl_transf_3
PHALIAPI_00853	224308.BSU08370	3.03e-134	381.0	COG1309@1|root,COG1309@2|Bacteria,1V9AU@1239|Firmicutes,4IPY6@91061|Bacilli,1ZREP@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yfiR	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_00854	224308.BSU08380	5.72e-268	737.0	COG0477@1|root,COG2814@2|Bacteria,1VYQ7@1239|Firmicutes,4HYZJ@91061|Bacilli,1ZFVK@1386|Bacillus	91061|Bacilli	EGP	Major facilitator superfamily	yfiS	-	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_00855	224308.BSU08390	7.75e-126	358.0	COG2318@1|root,COG2318@2|Bacteria,1V2BI@1239|Firmicutes,4HF8B@91061|Bacilli,1ZG53@1386|Bacillus	91061|Bacilli	S	Belongs to the metal hydrolase YfiT family	yfiT	-	-	-	-	-	-	-	-	-	-	-	DinB_2
PHALIAPI_00856	224308.BSU08400	0.0	983.0	COG0477@1|root,COG2814@2|Bacteria,1VSW8@1239|Firmicutes,4HUQC@91061|Bacilli,1ZAS8@1386|Bacillus	91061|Bacilli	EGP	the major facilitator superfamily	yfiU	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_00857	224308.BSU08410	8.59e-103	298.0	COG1846@1|root,COG1846@2|Bacteria,1V3P7@1239|Firmicutes,4HYD5@91061|Bacilli,1ZD03@1386|Bacillus	91061|Bacilli	K	transcriptional	yfiV	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_00858	224308.BSU08425	0.0	1626.0	COG0392@1|root,COG2898@1|root,COG0392@2|Bacteria,COG2898@2|Bacteria,1TQI2@1239|Firmicutes,4HBHU@91061|Bacilli,1ZCB5@1386|Bacillus	91061|Bacilli	S	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms	mprF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.3.2.3	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	M00726	-	-	ko00000,ko00001,ko00002,ko01000,ko01504	2.A.1.3.37	-	iYO844.BG12900	DUF2156,LPG_synthase_TM
PHALIAPI_00859	224308.BSU08440	3.83e-231	636.0	COG0614@1|root,COG0614@2|Bacteria,1TR63@1239|Firmicutes,4HB8N@91061|Bacilli,1ZCYN@1386|Bacillus	91061|Bacilli	P	ABC transporter substrate-binding protein	yfiY	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044424,GO:0044464	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
PHALIAPI_00860	224308.BSU08450	8.91e-225	621.0	COG0609@1|root,COG0609@2|Bacteria,1TP13@1239|Firmicutes,4HAW8@91061|Bacilli,1ZQ8X@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	yfiZ	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	iYO844.BSU08450	FecCD
PHALIAPI_00861	224308.BSU08460	5.18e-229	632.0	COG0609@1|root,COG0609@2|Bacteria,1TPX6@1239|Firmicutes,4HAM8@91061|Bacilli,1ZAU0@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	yfhA	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	iYO844.BSU07500	FecCD
PHALIAPI_00862	224308.BSU08470	1.41e-210	582.0	COG0384@1|root,COG0384@2|Bacteria,1TRAF@1239|Firmicutes,4HAC5@91061|Bacilli,1ZD49@1386|Bacillus	91061|Bacilli	S	PhzF family	yfhB	-	-	-	-	-	-	-	-	-	-	-	PhzC-PhzF
PHALIAPI_00863	224308.BSU08480	3.91e-136	385.0	COG0778@1|root,COG0778@2|Bacteria,1UYXM@1239|Firmicutes,4HD96@91061|Bacilli,1ZGXE@1386|Bacillus	91061|Bacilli	C	nitroreductase	yfhC	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
PHALIAPI_00864	224308.BSU08490	8.86e-35	119.0	2DJQF@1|root,306WX@2|Bacteria,1U0IF@1239|Firmicutes,4I9X1@91061|Bacilli,1ZJCB@1386|Bacillus	91061|Bacilli	S	YfhD-like protein	yfhD	-	-	-	-	-	-	-	-	-	-	-	YfhD
PHALIAPI_00866	224308.BSU08510	4.42e-219	604.0	COG1090@1|root,COG1090@2|Bacteria,1TRCE@1239|Firmicutes,4HBRT@91061|Bacilli,1ZBKW@1386|Bacillus	91061|Bacilli	S	nucleoside-diphosphate sugar epimerase	yfhF	-	-	ko:K07071	-	-	-	-	ko00000	-	-	-	DUF1731,Epimerase
PHALIAPI_00867	224308.BSU08520	1.22e-178	498.0	COG2137@1|root,COG2137@2|Bacteria,1V72V@1239|Firmicutes,4HJ7R@91061|Bacilli,1ZC8N@1386|Bacillus	91061|Bacilli	S	Modulates RecA activity	recX	-	-	ko:K03565	-	-	-	-	ko00000,ko03400	-	-	-	RecX
PHALIAPI_00868	224308.BSU08530	3.11e-67	204.0	2C8IW@1|root,32PGC@2|Bacteria,1VADG@1239|Firmicutes,4HNM3@91061|Bacilli,1ZH1I@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1811)	yfhH	-	-	-	-	-	-	-	-	-	-	-	DUF1811
PHALIAPI_00870	224308.BSU08540	8.17e-267	733.0	COG0477@1|root,COG2814@2|Bacteria,1TQXU@1239|Firmicutes,4HAYB@91061|Bacilli,1ZQ77@1386|Bacillus	91061|Bacilli	EGP	-transporter	yfhI	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_00871	224308.BSU08550	2.25e-27	99.4	2ERTV@1|root,33JD2@2|Bacteria,1VG3A@1239|Firmicutes,4HPKX@91061|Bacilli,1ZIVJ@1386|Bacillus	91061|Bacilli	S	reproduction	sspK	-	-	ko:K06428	-	-	-	-	ko00000	-	-	-	SspK
PHALIAPI_00872	224308.BSU08560	8.95e-60	184.0	2CEK7@1|root,330II@2|Bacteria,1VFTN@1239|Firmicutes,4HNJY@91061|Bacilli,1ZI0N@1386|Bacillus	91061|Bacilli	S	WVELL protein	yfhJ	-	-	-	-	-	-	-	-	-	-	-	WVELL
PHALIAPI_00873	224308.BSU08570	1.91e-114	328.0	COG3103@1|root,COG3103@2|Bacteria,1UBB8@1239|Firmicutes,4IMQ5@91061|Bacilli,1ZKKP@1386|Bacillus	91061|Bacilli	T	Bacterial SH3 domain homologues	yfhK	-	-	-	-	-	-	-	-	-	-	-	SH3_3
PHALIAPI_00874	224308.BSU08580	5.4e-67	204.0	COG5658@1|root,COG5658@2|Bacteria,1UHRY@1239|Firmicutes,4HSIY@91061|Bacilli,1ZK3C@1386|Bacillus	91061|Bacilli	S	SdpI/YhfL protein family	yfhL	-	-	-	-	-	-	-	-	-	-	-	SdpI
PHALIAPI_00875	224308.BSU08590	7.62e-216	594.0	COG0596@1|root,COG0596@2|Bacteria,1UZ7K@1239|Firmicutes,4HCZB@91061|Bacilli,1ZATX@1386|Bacillus	91061|Bacilli	S	Alpha beta hydrolase	yfhM	-	3.8.1.5	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05284,R05367,R05368,R05369,R05370,R07669,R07670	RC01317,RC01340,RC01341,RC02013	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
PHALIAPI_00876	224308.BSU08600	3.43e-236	649.0	COG0463@1|root,COG0463@2|Bacteria,1TPR3@1239|Firmicutes,4HC2Z@91061|Bacilli,1ZD2D@1386|Bacillus	91061|Bacilli	M	COG0463 Glycosyltransferases involved in cell wall biogenesis	csbB	-	-	ko:K20534	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.2.1.9	GT2	-	Glycos_transf_2
PHALIAPI_00877	224308.BSU08610	0.0	1657.0	COG4485@1|root,COG4485@2|Bacteria,1TPVY@1239|Firmicutes,4HD9X@91061|Bacilli,1ZCSF@1386|Bacillus	91061|Bacilli	S	Bacterial membrane protein YfhO	yfhO	-	-	-	-	-	-	-	-	-	-	-	YfhO
PHALIAPI_00878	224308.BSU08620	2.07e-236	650.0	COG1988@1|root,COG1988@2|Bacteria,1TQFC@1239|Firmicutes,4H9PU@91061|Bacilli,1ZBEI@1386|Bacillus	91061|Bacilli	S	membrane-bound metal-dependent	yfhP	-	-	ko:K07038	-	-	-	-	ko00000	-	-	-	YdjM
PHALIAPI_00879	1051501.AYTL01000029_gene1550	2.16e-264	728.0	COG1194@1|root,COG1194@2|Bacteria,1TPUT@1239|Firmicutes,4H9UM@91061|Bacilli,1ZD5Y@1386|Bacillus	91061|Bacilli	L	A G-specific	mutY	-	-	ko:K03575	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD,NUDIX_4
PHALIAPI_00880	224308.BSU08640	1.73e-48	154.0	2BX0I@1|root,335P2@2|Bacteria,1VGI6@1239|Firmicutes,4HQNB@91061|Bacilli,1ZHXH@1386|Bacillus	91061|Bacilli	-	-	yfhS	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00881	224308.BSU08650	3.13e-172	481.0	COG1028@1|root,COG1028@2|Bacteria,1TRVE@1239|Firmicutes,4HCFY@91061|Bacilli,1ZAXT@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	fabL	GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576	1.3.1.104	ko:K10780	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00083	R01404,R04430,R04725,R04956,R04959,R04962,R04967,R04970	RC00052,RC00076,RC00120	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
PHALIAPI_00882	224308.BSU08660	2.35e-14	68.9	2DRQR@1|root,33CNQ@2|Bacteria,1VGGC@1239|Firmicutes,4HR2A@91061|Bacilli,1ZJ1V@1386|Bacillus	91061|Bacilli	S	Small, acid-soluble spore protein, gamma-type	sspE	-	-	ko:K06422	-	-	-	-	ko00000	-	-	-	SASP_gamma
PHALIAPI_00883	224308.BSU08670	1.88e-63	194.0	29NRW@1|root,309PW@2|Bacteria,1U5GK@1239|Firmicutes,4IF7D@91061|Bacilli,1ZIZN@1386|Bacillus	91061|Bacilli	S	YgaB-like protein	ygaB	-	-	-	-	-	-	-	-	-	-	-	YgaB
PHALIAPI_00884	1051501.AYTL01000029_gene1545	8.1e-136	383.0	COG3557@1|root,COG3557@2|Bacteria,1TRX8@1239|Firmicutes,4H9NM@91061|Bacilli,1ZB2J@1386|Bacillus	91061|Bacilli	J	Belongs to the UPF0374 family	ygaC	-	-	ko:K07586	-	-	-	-	ko00000	-	-	-	DUF402
PHALIAPI_00885	224308.BSU08690	0.0	1094.0	COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4HA3S@91061|Bacilli,1ZAY7@1386|Bacillus	91061|Bacilli	V	ABC transporter	ygaD	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702	-	ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106	-	-	ABC_membrane,ABC_tran
PHALIAPI_00886	224308.BSU08700	2.54e-236	652.0	COG4129@1|root,COG4129@2|Bacteria,1TPVH@1239|Firmicutes,4HAEG@91061|Bacilli,1ZCJA@1386|Bacillus	91061|Bacilli	S	Membrane	ygaE	-	-	-	-	-	-	-	-	-	-	-	ArAE_1
PHALIAPI_00887	224308.BSU08710	2.2e-310	845.0	COG0001@1|root,COG0001@2|Bacteria,1TPNH@1239|Firmicutes,4HBDZ@91061|Bacilli,1ZB74@1386|Bacillus	91061|Bacilli	H	Glutamate-1-semialdehyde aminotransferase	gsaB	-	5.4.3.8	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02272	RC00677	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	iYO844.BSU08710	Aminotran_3
PHALIAPI_00888	224308.BSU08720	6.88e-112	321.0	COG1225@1|root,COG1225@2|Bacteria,1V3N5@1239|Firmicutes,4HH7Z@91061|Bacilli,1ZFKU@1386|Bacillus	91061|Bacilli	O	Peroxiredoxin	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
PHALIAPI_00889	224308.BSU08730	2.37e-104	301.0	COG0735@1|root,COG0735@2|Bacteria,1V400@1239|Firmicutes,4HHF8@91061|Bacilli,1ZFKE@1386|Bacillus	91061|Bacilli	P	Belongs to the Fur family	perR	GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	ko:K09825	-	-	-	-	ko00000,ko03000	-	-	-	FUR
PHALIAPI_00890	1051501.AYTL01000029_gene1539	3.38e-73	220.0	2C1CK@1|root,313Y4@2|Bacteria,1V6FR@1239|Firmicutes,4HIGI@91061|Bacilli,1ZGXQ@1386|Bacillus	91061|Bacilli	S	UPF0295 protein	ygzB	-	-	-	-	-	-	-	-	-	-	-	DUF2614
PHALIAPI_00891	224308.BSU08750	8.23e-215	592.0	28IXS@1|root,2Z8VM@2|Bacteria,1TR3A@1239|Firmicutes,4HDYI@91061|Bacilli,1ZB0T@1386|Bacillus	91061|Bacilli	S	Nucleotidyltransferase-like	ygxA	-	-	-	-	-	-	-	-	-	-	-	NTF-like
PHALIAPI_00892	1051501.AYTL01000008_gene1340	1.13e-53	168.0	2DMNG@1|root,32SP1@2|Bacteria,1VAXC@1239|Firmicutes,4HM1Q@91061|Bacilli,1ZI92@1386|Bacillus	91061|Bacilli	S	COG NOG14552 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00909	224308.BSU08760	9.06e-185	513.0	COG4326@1|root,COG4326@2|Bacteria,1TPEA@1239|Firmicutes,4HBPW@91061|Bacilli,1ZBFU@1386|Bacillus	91061|Bacilli	S	COG4326 Sporulation control protein	spo0M	-	-	ko:K06377	-	-	-	-	ko00000	-	-	-	Spo0M
PHALIAPI_00910	224308.BSU08770	1.58e-36	123.0	29SG5@1|root,30DM3@2|Bacteria,1UBEU@1239|Firmicutes,4IMTF@91061|Bacilli,1ZKT6@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00911	224308.BSU08780	5.27e-168	469.0	COG3340@1|root,COG3340@2|Bacteria,1TRBA@1239|Firmicutes,4HB19@91061|Bacilli,1ZC4Z@1386|Bacillus	91061|Bacilli	E	Belongs to the peptidase S51 family	ygaJ	GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564	3.4.13.21	ko:K05995	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S51
PHALIAPI_00913	224308.BSU08790	0.0	1189.0	COG0422@1|root,COG0422@2|Bacteria,1TNZ3@1239|Firmicutes,4HC0P@91061|Bacilli,1ZBCQ@1386|Bacillus	91061|Bacilli	H	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction	thiC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.99.17	ko:K03147	ko00730,ko01100,map00730,map01100	M00127	R03472	RC03251,RC03252	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU08790	ThiC-associated,ThiC_Rad_SAM
PHALIAPI_00915	224308.BSU08820	0.0	993.0	COG0753@1|root,COG0753@2|Bacteria,1TPPV@1239|Firmicutes,4H9XQ@91061|Bacilli,1ZB44@1386|Bacillus	91061|Bacilli	P	serves to protect cells from the toxic effects of hydrogen peroxide	katA	GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070887,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1990748	1.11.1.6	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	M00532	R00009,R00602,R02670	RC00034,RC00767,RC02141,RC02755	ko00000,ko00001,ko00002,ko01000	-	-	-	Catalase,Catalase-rel
PHALIAPI_00916	224308.BSU08830	1.05e-177	495.0	COG1116@1|root,COG1116@2|Bacteria,1TRM6@1239|Firmicutes,4HAJC@91061|Bacilli,1ZCC8@1386|Bacillus	91061|Bacilli	P	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component	ssuB	GO:0003674,GO:0005215,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0022857,GO:0034220,GO:0051179,GO:0051234,GO:0055085,GO:0098656	-	ko:K15555	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.17.2	-	iYO844.BSU08830	ABC_tran
PHALIAPI_00917	224308.BSU08840	1.4e-216	600.0	COG0715@1|root,COG0715@2|Bacteria,1TRET@1239|Firmicutes,4IPY7@91061|Bacilli,1ZREQ@1386|Bacillus	91061|Bacilli	M	Sulfonate ABC transporter	ssuA	GO:0003674,GO:0005215	-	ko:K15553	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.17.2	-	-	NMT1
PHALIAPI_00918	224308.BSU08850	9.72e-189	525.0	COG0600@1|root,COG0600@2|Bacteria,1TQ26@1239|Firmicutes,4HCJ7@91061|Bacilli,1ZBH6@1386|Bacillus	91061|Bacilli	P	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component	ssuC	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0042908,GO:0042910,GO:0042918,GO:0042959,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K15554	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.17.2	-	-	BPD_transp_1
PHALIAPI_00919	224308.BSU08860	2.57e-273	747.0	COG2141@1|root,COG2141@2|Bacteria,1TW8W@1239|Firmicutes,4HB95@91061|Bacilli,1ZCMH@1386|Bacillus	91061|Bacilli	C	Catalyzes the desulfonation of aliphatic sulfonates	ssuD	-	1.14.14.28,1.14.14.5	ko:K04091,ko:K20938	ko00920,map00920	-	R07210,R10206	RC01779,RC02556	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
PHALIAPI_00920	224308.BSU08880	2.79e-54	170.0	COG0199@1|root,COG0199@2|Bacteria,1VEF6@1239|Firmicutes,4HKK1@91061|Bacilli,1ZHU3@1386|Bacillus	91061|Bacilli	J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site	rpsN	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02954	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S14
PHALIAPI_00921	224308.BSU08890	6.58e-101	293.0	2BYG6@1|root,33MFH@2|Bacteria,1VKUT@1239|Firmicutes,4HS20@91061|Bacilli,1ZJNY@1386|Bacillus	91061|Bacilli	-	-	ygaO	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00922	224308.BSU08899	1.48e-39	131.0	COG1476@1|root,COG1476@2|Bacteria,1VCMF@1239|Firmicutes,4HQAM@91061|Bacilli,1ZJDE@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	-	-	-	ko:K07729	-	-	-	-	ko00000,ko03000	-	-	-	HTH_3
PHALIAPI_00924	224308.BSU08900	4.87e-141	399.0	COG3382@1|root,COG3382@2|Bacteria,1V7YR@1239|Firmicutes,4HGDN@91061|Bacilli,1ZBT2@1386|Bacillus	91061|Bacilli	S	B3/4 domain	yhzB	-	-	-	-	-	-	-	-	-	-	-	B3_4
PHALIAPI_00925	224308.BSU08910	2.82e-282	771.0	COG1600@1|root,COG1600@2|Bacteria,1TP6Q@1239|Firmicutes,4HAEW@91061|Bacilli,1ZC1W@1386|Bacillus	91061|Bacilli	C	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)	queG	GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	1.17.99.6	ko:K18979	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DUF1730,Fer4_16,HEAT_2
PHALIAPI_00926	224308.BSU08920	6.53e-224	617.0	2DB72@1|root,2Z7JI@2|Bacteria,1UR4B@1239|Firmicutes,4HCE4@91061|Bacilli,1ZC8T@1386|Bacillus	91061|Bacilli	S	Putative amidase domain	yhbB	-	-	-	-	-	-	-	-	-	-	-	Amidase_6
PHALIAPI_00927	224308.BSU08930	1.08e-111	320.0	COG0219@1|root,COG0219@2|Bacteria,1V3GW@1239|Firmicutes,4HFNY@91061|Bacilli,1ZFKH@1386|Bacillus	91061|Bacilli	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily	cspR	-	2.1.1.207	ko:K03216	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	SpoU_methylase
PHALIAPI_00928	224308.BSU08940	7.67e-140	397.0	COG0789@1|root,COG0789@2|Bacteria,1UYCQ@1239|Firmicutes,4HI3I@91061|Bacilli,1ZEDR@1386|Bacillus	91061|Bacilli	K	Protein of unknown function (DUF4004)	yhbD	-	-	-	-	-	-	-	-	-	-	-	DUF4004
PHALIAPI_00929	224308.BSU08950	4.62e-96	287.0	COG1664@1|root,COG1664@2|Bacteria,1V6E6@1239|Firmicutes,4HHZU@91061|Bacilli,1ZQYV@1386|Bacillus	91061|Bacilli	M	COG1664 Integral membrane protein CcmA involved in cell shape determination	yhbE	-	-	-	-	-	-	-	-	-	-	-	Bactofilin
PHALIAPI_00930	224308.BSU08960	1.42e-103	306.0	COG1664@1|root,COG1664@2|Bacteria,1V6FF@1239|Firmicutes,4HJV2@91061|Bacilli,1ZGKZ@1386|Bacillus	91061|Bacilli	M	COG1664 Integral membrane protein CcmA involved in cell shape determination	yhbF	-	-	-	-	-	-	-	-	-	-	-	Bactofilin
PHALIAPI_00931	224308.BSU08970	0.0	1225.0	COG2766@1|root,COG2766@2|Bacteria,1TRTW@1239|Firmicutes,4HA8A@91061|Bacilli,1ZBM9@1386|Bacillus	91061|Bacilli	T	Ser protein kinase	prkA	-	-	ko:K07180	-	-	-	-	ko00000	-	-	-	AAA_PrkA,PrkA
PHALIAPI_00932	224308.BSU08980	1.21e-286	782.0	COG2718@1|root,COG2718@2|Bacteria,1TQIN@1239|Firmicutes,4HBIH@91061|Bacilli,1ZATH@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0229 family	yhbH	-	-	ko:K09786	-	-	-	-	ko00000	-	-	-	DUF444
PHALIAPI_00933	224308.BSU08990	1.29e-101	295.0	COG1846@1|root,COG1846@2|Bacteria	2|Bacteria	K	DNA-binding transcription factor activity	yhbI	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	ko:K15973	-	-	-	-	ko00000,ko03000	-	-	-	MarR
PHALIAPI_00934	224308.BSU09000	2.67e-133	380.0	COG1566@1|root,COG1566@2|Bacteria,1V1F5@1239|Firmicutes,4HHAT@91061|Bacilli,1ZE85@1386|Bacillus	91061|Bacilli	V	COG1566 Multidrug resistance efflux pump	yhbJ	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
PHALIAPI_00935	224308.BSU09010	0.0	1004.0	COG0477@1|root,COG2814@2|Bacteria,1TPRN@1239|Firmicutes,4H9VV@91061|Bacilli,1ZAXQ@1386|Bacillus	91061|Bacilli	EGP	the major facilitator superfamily	yhcA	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
PHALIAPI_00936	224308.BSU09020	4.87e-128	363.0	COG0655@1|root,COG0655@2|Bacteria,1TSY9@1239|Firmicutes,4H9MQ@91061|Bacilli,1ZBKC@1386|Bacillus	91061|Bacilli	S	Belongs to the WrbA family	yhcB	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114	1.6.5.2	ko:K03809	ko00130,ko01110,map00130,map01110	-	R02964,R03643,R03816	RC00819	ko00000,ko00001,ko01000	-	-	-	FMN_red
PHALIAPI_00937	224308.BSU09030	1.08e-56	179.0	28XRM@1|root,2ZJN4@2|Bacteria,1W210@1239|Firmicutes,4I1DZ@91061|Bacilli,1ZKKM@1386|Bacillus	91061|Bacilli	-	-	yhcC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00938	720555.BATR1942_02120	6.7e-68	217.0	2CHZZ@1|root,32S6Y@2|Bacteria,1VA01@1239|Firmicutes,4IJSI@91061|Bacilli,1ZJVW@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00939	224308.BSU09060	4.78e-79	235.0	COG1725@1|root,COG1725@2|Bacteria,1VA2B@1239|Firmicutes,4HPK4@91061|Bacilli,1ZHSQ@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yhcF	-	-	ko:K07979	-	-	-	-	ko00000,ko03000	-	-	-	GntR
PHALIAPI_00940	224308.BSU09070	5.38e-155	436.0	COG1131@1|root,COG1131@2|Bacteria,1TPUP@1239|Firmicutes,4HC2V@91061|Bacilli,1ZCBF@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	yhcG	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_00941	224308.BSU09080	7.55e-212	586.0	COG1131@1|root,COG1131@2|Bacteria,1TP4J@1239|Firmicutes,4HBGH@91061|Bacilli,1ZB4N@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	yhcH	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_00942	224308.BSU09090	1.4e-211	586.0	COG1277@1|root,COG1277@2|Bacteria,1TT9E@1239|Firmicutes,4HE5W@91061|Bacilli,1ZDPM@1386|Bacillus	91061|Bacilli	S	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component	yhcI	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC2_membrane_4
PHALIAPI_00943	224308.BSU09100	1.91e-42	138.0	COG1278@1|root,COG1278@2|Bacteria,1VEE0@1239|Firmicutes,4HNJC@91061|Bacilli,1ZHTU@1386|Bacillus	91061|Bacilli	K	Cold-shock protein	cspB	GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
PHALIAPI_00944	224308.BSU09110	4.31e-192	533.0	COG1464@1|root,COG1464@2|Bacteria,1TQAS@1239|Firmicutes,4HCTA@91061|Bacilli,1ZB4Z@1386|Bacillus	91061|Bacilli	M	Belongs to the nlpA lipoprotein family	metQ_3	-	-	ko:K02073	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	Lipoprotein_9
PHALIAPI_00945	224308.BSU09120	2.88e-250	687.0	COG2199@1|root,COG3706@2|Bacteria,1TQIK@1239|Firmicutes,4HEDD@91061|Bacilli,1ZB59@1386|Bacillus	91061|Bacilli	T	COG2199 FOG GGDEF domain	yhcK	-	2.7.7.65	ko:K18967	-	-	-	-	ko00000,ko01000,ko02000	9.B.34.1.1	-	-	5TM-5TMR_LYT,GAF_2,GGDEF
PHALIAPI_00946	224308.BSU09130	2.62e-301	825.0	COG1823@1|root,COG1823@2|Bacteria,1UPUK@1239|Firmicutes,4HAJY@91061|Bacilli,1ZB7C@1386|Bacillus	91061|Bacilli	U	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	tcyP	-	-	ko:K06956	-	-	-	-	ko00000	-	-	-	SDF
PHALIAPI_00947	224308.BSU09140	1.69e-72	221.0	29RHY@1|root,30CKX@2|Bacteria,1UA2I@1239|Firmicutes,4IKBT@91061|Bacilli,1ZGD7@1386|Bacillus	91061|Bacilli	-	-	yhcM	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00948	224308.BSU09150	7.71e-111	321.0	2DZ9Y@1|root,32V70@2|Bacteria,1VA6H@1239|Firmicutes,4HKSG@91061|Bacilli,1ZHSJ@1386|Bacillus	91061|Bacilli	S	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)	yhcN	-	-	-	-	-	-	-	-	-	-	-	Spore_YhcN_YlaJ
PHALIAPI_00949	224308.BSU09165	3.12e-224	619.0	2AJCZ@1|root,319YD@2|Bacteria,1V9QT@1239|Firmicutes,4IIN1@91061|Bacilli,1ZDEB@1386|Bacillus	91061|Bacilli	-	-	yhcP	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_00950	224308.BSU09180	1.68e-146	413.0	COG5577@1|root,COG5577@2|Bacteria,1UIAR@1239|Firmicutes,4HC0T@91061|Bacilli,1ZDQK@1386|Bacillus	91061|Bacilli	M	Spore coat protein	yhcQ	-	-	-	-	-	-	-	-	-	-	-	Coat_F
PHALIAPI_00951	224308.BSU09190	0.0	2276.0	COG0737@1|root,COG1525@1|root,COG4085@1|root,COG0737@2|Bacteria,COG1525@2|Bacteria,COG4085@2|Bacteria,1TPV2@1239|Firmicutes,4HB9S@91061|Bacilli,1ZAY0@1386|Bacillus	91061|Bacilli	F	Belongs to the 5'-nucleotidase family	yhcR	-	3.1.3.5,3.1.3.6,3.1.4.16	ko:K01081,ko:K01119,ko:K08693	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01562,R01569,R01664,R01877,R01968,R02088,R02102,R02148,R02323,R02370,R02719,R03346,R03537,R03538,R03929,R05135	RC00017,RC00078,RC00296	ko00000,ko00001,ko01000	-	-	iYO844.BSU07840	5_nucleotid_C,Gram_pos_anchor,LTD,Metallophos,SLH,SNase
PHALIAPI_00952	224308.BSU09200	6.2e-135	382.0	COG3764@1|root,COG3764@2|Bacteria,1V1RS@1239|Firmicutes,4HFWK@91061|Bacilli,1ZFRS@1386|Bacillus	91061|Bacilli	M	COG3764 Sortase (surface protein transpeptidase)	yhcS	-	3.4.22.70	ko:K07284	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Sortase
PHALIAPI_00953	224308.BSU09210	2.76e-217	599.0	COG0564@1|root,COG0564@2|Bacteria,1TSM6@1239|Firmicutes,4HA7M@91061|Bacilli,1ZDMG@1386|Bacillus	91061|Bacilli	J	Responsible for synthesis of pseudouridine from uracil	rluA	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.23,5.4.99.28,5.4.99.29	ko:K06177,ko:K06180	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
PHALIAPI_00954	224308.BSU09220	2.89e-87	256.0	29RAQ@1|root,30CCF@2|Bacteria,1U9MH@1239|Firmicutes,4IJSY@91061|Bacilli,1ZG4U@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5365)	yhcU	-	-	-	-	-	-	-	-	-	-	-	DUF5365
PHALIAPI_00955	224308.BSU09230	1.76e-90	265.0	COG0517@1|root,COG0517@2|Bacteria,1V9ZB@1239|Firmicutes,4ISB2@91061|Bacilli,1ZS4F@1386|Bacillus	91061|Bacilli	S	COG0517 FOG CBS domain	yhcV	-	-	-	-	-	-	-	-	-	-	-	CBS
PHALIAPI_00956	224308.BSU09240	8.37e-153	429.0	COG0637@1|root,COG0637@2|Bacteria,1V1N8@1239|Firmicutes,4HG58@91061|Bacilli,1ZEV6@1386|Bacillus	91061|Bacilli	S	hydrolase	yhcW	GO:0003674,GO:0003824,GO:0003850,GO:0004346,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0044237,GO:0050308,GO:0050309	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
PHALIAPI_00957	224308.BSU09250	0.0	1044.0	COG0388@1|root,COG3153@1|root,COG0388@2|Bacteria,COG3153@2|Bacteria,1TQAZ@1239|Firmicutes,4HCQW@91061|Bacilli,1ZB16@1386|Bacillus	91061|Bacilli	K	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	yhcX	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,CN_hydrolase
PHALIAPI_00958	224308.BSU09260	0.0	904.0	COG0161@1|root,COG0161@2|Bacteria,1TP9N@1239|Firmicutes,4HAA5@91061|Bacilli,1ZAUQ@1386|Bacillus	91061|Bacilli	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	yhxA	-	-	-	-	-	-	-	-	-	-	-	Aminotran_3
PHALIAPI_00959	224308.BSU09270	6.25e-134	379.0	COG1954@1|root,COG1954@2|Bacteria,1V4IE@1239|Firmicutes,4HH9Q@91061|Bacilli,1ZCJN@1386|Bacillus	91061|Bacilli	K	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA	glpP	GO:0001072,GO:0001678,GO:0003674,GO:0005975,GO:0006066,GO:0006071,GO:0006355,GO:0008150,GO:0008152,GO:0009743,GO:0009746,GO:0009749,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0019400,GO:0019725,GO:0019751,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0033500,GO:0034284,GO:0042221,GO:0042592,GO:0042593,GO:0043242,GO:0043244,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046677,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0055082,GO:0060255,GO:0060567,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071704,GO:0080090,GO:0140110,GO:1901615,GO:1901700,GO:1901701,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141	-	ko:K02443	-	-	-	-	ko00000,ko03000	-	-	-	G3P_antiterm
PHALIAPI_00960	224308.BSU09280	2.32e-195	541.0	COG0580@1|root,COG0580@2|Bacteria,1TP4T@1239|Firmicutes,4HAWP@91061|Bacilli,1ZCUB@1386|Bacillus	91061|Bacilli	G	Belongs to the MIP aquaporin (TC 1.A.8) family	glpF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02440	-	-	-	-	ko00000,ko02000	1.A.8.1,1.A.8.2	-	-	MIP
PHALIAPI_00961	224308.BSU09290	0.0	1002.0	COG0554@1|root,COG0554@2|Bacteria,1TPX3@1239|Firmicutes,4H9ZF@91061|Bacilli,1ZB20@1386|Bacillus	91061|Bacilli	C	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate	glpK	GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615	2.7.1.30	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	-	R00847	RC00002,RC00017	ko00000,ko00001,ko01000,ko04147	-	-	-	FGGY_C,FGGY_N
PHALIAPI_00962	224308.BSU09300	0.0	1106.0	COG0578@1|root,COG0578@2|Bacteria,1TQJN@1239|Firmicutes,4HAG8@91061|Bacilli,1ZCGN@1386|Bacillus	91061|Bacilli	C	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family	glpD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944	1.1.3.21,1.1.5.3	ko:K00105,ko:K00111	ko00564,ko01110,map00564,map01110	-	R00846,R00848	RC00029	ko00000,ko00001,ko01000	-	-	-	DAO,DAO_C
PHALIAPI_00963	224308.BSU09310	0.0	1122.0	COG1109@1|root,COG1109@2|Bacteria,1TP2N@1239|Firmicutes,4HADU@91061|Bacilli,1ZBEM@1386|Bacillus	91061|Bacilli	G	Phosphoglucomutase	pgcA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	5.4.2.2	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	M00549	R00959,R01057,R08639	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
PHALIAPI_00964	224308.BSU09320	6.28e-271	741.0	COG2203@1|root,COG4585@1|root,COG2203@2|Bacteria,COG4585@2|Bacteria,1TR88@1239|Firmicutes,4HBF3@91061|Bacilli,1ZCMJ@1386|Bacillus	91061|Bacilli	T	Histidine kinase	yhcY	-	2.7.13.3	ko:K02480	-	-	-	-	ko00000,ko01000,ko01001,ko02022	-	-	-	GAF_2,HATPase_c,HisKA_3
PHALIAPI_00965	224308.BSU09330	1.56e-143	405.0	COG2197@1|root,COG2197@2|Bacteria,1TRXG@1239|Firmicutes,4HCCV@91061|Bacilli,1ZDBY@1386|Bacillus	91061|Bacilli	K	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	yhcZ	-	-	ko:K02479	-	-	-	-	ko00000,ko02022	-	-	-	GerE,Response_reg
PHALIAPI_00966	224308.BSU09340	5.24e-113	325.0	COG0431@1|root,COG0431@2|Bacteria,1VDZQ@1239|Firmicutes,4HMQ1@91061|Bacilli,1ZQ9A@1386|Bacillus	91061|Bacilli	S	NADPH-dependent FMN reductase	yhdA	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0010181,GO:0016491,GO:0016645,GO:0016646,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0052873,GO:0055114,GO:0097159,GO:0097367,GO:1901265,GO:1901363	1.7.1.6	ko:K03206	-	-	-	-	ko00000,ko01000	-	-	-	FMN_red
PHALIAPI_00967	224308.BSU09350	1.36e-50	160.0	2E2U4@1|root,32XW8@2|Bacteria,1VAT9@1239|Firmicutes,4HN53@91061|Bacilli,1ZHZK@1386|Bacillus	91061|Bacilli	S	YhdB-like protein	yhdB	-	-	-	-	-	-	-	-	-	-	-	YhdB
PHALIAPI_00968	224308.BSU09360	1.02e-71	215.0	29RSF@1|root,30CW8@2|Bacteria,1UAGC@1239|Firmicutes,4IKUT@91061|Bacilli,1ZHQ6@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3889)	yhdC	-	-	-	-	-	-	-	-	-	-	-	DUF3889
PHALIAPI_00969	224308.BSU09370	8.85e-271	750.0	COG0791@1|root,COG1388@1|root,COG0791@2|Bacteria,COG1388@2|Bacteria,1TP24@1239|Firmicutes,4HA77@91061|Bacilli,1ZCHY@1386|Bacillus	91061|Bacilli	M	COG1388 FOG LysM repeat	lytF	-	-	ko:K19220,ko:K19223,ko:K19224	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	CBM50	-	LysM,NLPC_P60
PHALIAPI_00970	224308.BSU09380	5.58e-99	287.0	COG1959@1|root,COG1959@2|Bacteria,1V4G2@1239|Firmicutes,4HHBH@91061|Bacilli,1ZH5D@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	nsrR	-	-	ko:K13771	ko05132,map05132	-	-	-	ko00000,ko00001,ko03000	-	-	-	Rrf2
PHALIAPI_00971	1121090.KB894688_gene1624	9.18e-252	701.0	COG3039@1|root,COG3039@2|Bacteria,1TPFS@1239|Firmicutes,4H9V9@91061|Bacilli,1ZDIP@1386|Bacillus	91061|Bacilli	L	COG3666 Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1,DDE_Tnp_1_6,DUF772
PHALIAPI_00972	224308.BSU09390	2.38e-303	836.0	COG0668@1|root,COG0668@2|Bacteria,1TQXJ@1239|Firmicutes,4HCK2@91061|Bacilli,1ZF3F@1386|Bacillus	91061|Bacilli	M	Conserved TM helix	ygxB	-	-	-	-	-	-	-	-	-	-	-	TM_helix
PHALIAPI_00973	224308.BSU09400	0.0	955.0	COG2719@1|root,COG2719@2|Bacteria,1TRHQ@1239|Firmicutes,4HBAW@91061|Bacilli,1ZAT5@1386|Bacillus	91061|Bacilli	S	Stage V sporulation protein R	spoVR	-	-	ko:K06415	-	-	-	-	ko00000	-	-	-	SpoVR
PHALIAPI_00974	224308.BSU09410	0.0	887.0	COG1785@1|root,COG1785@2|Bacteria,1TQCI@1239|Firmicutes,4HA27@91061|Bacilli,1ZB3J@1386|Bacillus	91061|Bacilli	P	Belongs to the alkaline phosphatase family	phoB	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	Alk_phosphatase
PHALIAPI_00975	224308.BSU09420	7.21e-204	568.0	COG0791@1|root,COG1388@1|root,COG0791@2|Bacteria,COG1388@2|Bacteria,1TP24@1239|Firmicutes,4HA77@91061|Bacilli,1ZCHY@1386|Bacillus	91061|Bacilli	M	COG1388 FOG LysM repeat	lytE	-	-	ko:K19220,ko:K19223,ko:K19224	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	CBM50	-	LysM,NLPC_P60
PHALIAPI_00976	224308.BSU09430	4.93e-210	580.0	COG0583@1|root,COG0583@2|Bacteria,1V1MH@1239|Firmicutes,4HFVE@91061|Bacilli,1ZD99@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	citR	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K19242	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
PHALIAPI_00977	224308.BSU09440	1.3e-261	717.0	COG0372@1|root,COG0372@2|Bacteria,1TPPS@1239|Firmicutes,4HDG0@91061|Bacilli,1ZBE9@1386|Bacillus	91061|Bacilli	C	Belongs to the citrate synthase family	citA	-	2.3.3.1	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00740	R00351	RC00004,RC00067	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Citrate_synt
PHALIAPI_00978	224308.BSU09450	1.92e-206	571.0	COG1028@1|root,COG1028@2|Bacteria,1TR53@1239|Firmicutes,4HB8Y@91061|Bacilli,1ZAS0@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	yhdF	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
PHALIAPI_00979	224308.BSU09460	1.43e-315	862.0	COG0531@1|root,COG0531@2|Bacteria,1TQ4K@1239|Firmicutes,4HA66@91061|Bacilli,1ZBB0@1386|Bacillus	91061|Bacilli	E	amino acid	yhdG	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
PHALIAPI_00980	224308.BSU09470	2.48e-309	845.0	COG0733@1|root,COG0733@2|Bacteria,1TP6B@1239|Firmicutes,4HAAI@91061|Bacilli,1ZBC5@1386|Bacillus	91061|Bacilli	S	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family	yhdH	-	-	ko:K03308	-	-	-	-	ko00000	2.A.22.4,2.A.22.5	-	-	SNF
PHALIAPI_00981	224308.BSU09480	0.0	915.0	COG1167@1|root,COG1167@2|Bacteria,1TPS5@1239|Firmicutes,4HB2U@91061|Bacilli,1ZB5R@1386|Bacillus	91061|Bacilli	K	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	ydeL	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
PHALIAPI_00982	224308.BSU09490	7.13e-100	289.0	COG0454@1|root,COG0456@2|Bacteria,1V47B@1239|Firmicutes,4HHAS@91061|Bacilli,1ZI27@1386|Bacillus	91061|Bacilli	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	-	GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_00983	224308.BSU09500	4.27e-59	182.0	29RMT@1|root,30CR2@2|Bacteria,1UA8R@1239|Firmicutes,4IKK7@91061|Bacilli,1ZH64@1386|Bacillus	91061|Bacilli	S	Sigma-M inhibitor protein	yhdK	-	-	-	-	-	-	-	-	-	-	-	YhdK
PHALIAPI_00984	224308.BSU09510	6.13e-258	707.0	2C5RJ@1|root,2Z96W@2|Bacteria,1USSJ@1239|Firmicutes,4IRP8@91061|Bacilli,1ZRWA@1386|Bacillus	91061|Bacilli	S	Sigma factor regulator N-terminal	yhdL	-	-	-	-	-	-	-	-	-	-	-	Sigma_reg_C,Sigma_reg_N,zf-HC2
PHALIAPI_00985	224308.BSU09520	3.24e-113	325.0	COG1595@1|root,COG1595@2|Bacteria,1VYEJ@1239|Firmicutes,4IPY8@91061|Bacilli,1ZGTR@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	sigM	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
PHALIAPI_00986	224308.BSU09530	5.54e-243	667.0	COG0667@1|root,COG0667@2|Bacteria,1TPIY@1239|Firmicutes,4HA4Q@91061|Bacilli,1ZFDQ@1386|Bacillus	91061|Bacilli	C	Aldo keto reductase	yhdN	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
PHALIAPI_00987	224308.BSU09540	3.9e-143	403.0	COG0204@1|root,COG0204@2|Bacteria,1U8N2@1239|Firmicutes,4HDQR@91061|Bacilli,1ZQCA@1386|Bacillus	91061|Bacilli	I	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family	plsC	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008374,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0042171,GO:0044464,GO:0071617,GO:0071944	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
PHALIAPI_00988	224308.BSU09550	2.18e-304	832.0	COG1253@1|root,COG1253@2|Bacteria,1TPN0@1239|Firmicutes,4H9SB@91061|Bacilli,1ZBAN@1386|Bacillus	91061|Bacilli	S	COG1253 Hemolysins and related proteins containing CBS domains	yhdP	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
PHALIAPI_00989	224308.BSU09560	2.83e-96	282.0	COG0789@1|root,COG0789@2|Bacteria,1VHZ2@1239|Firmicutes,4HMJ6@91061|Bacilli,1ZHVY@1386|Bacillus	91061|Bacilli	K	transcriptional	cueR	-	-	ko:K11923	-	-	-	-	ko00000,ko03000	-	-	-	MerR_1
PHALIAPI_00990	224308.BSU09570	5.1e-284	776.0	COG0436@1|root,COG0436@2|Bacteria,1TP36@1239|Firmicutes,4HFCH@91061|Bacilli,1ZEW4@1386|Bacillus	91061|Bacilli	E	Aminotransferase	yhdR	-	2.6.1.1	ko:K11358	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
PHALIAPI_00991	224308.BSU09590	4.33e-315	860.0	COG1253@1|root,COG1253@2|Bacteria,1TPN0@1239|Firmicutes,4H9SB@91061|Bacilli,1ZBQF@1386|Bacillus	91061|Bacilli	P	COG1253 Hemolysins and related proteins containing CBS domains	yhdT	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
PHALIAPI_00992	224308.BSU09600	1.18e-64	198.0	COG0239@1|root,COG0239@2|Bacteria,1VM30@1239|Firmicutes,4HRC4@91061|Bacilli,1ZIV0@1386|Bacillus	91061|Bacilli	D	Important for reducing fluoride concentration in the cell, thus reducing its toxicity	crcB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425	-	ko:K06199	-	-	-	-	ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3	-	-	CRCB
PHALIAPI_00993	224308.BSU09610	2.78e-85	251.0	COG0239@1|root,COG0239@2|Bacteria,1VEH7@1239|Firmicutes,4HNI0@91061|Bacilli,1ZJ3M@1386|Bacillus	91061|Bacilli	D	Important for reducing fluoride concentration in the cell, thus reducing its toxicity	crcB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425	-	ko:K06199	-	-	-	-	ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3	-	-	CRCB
PHALIAPI_00994	224308.BSU09620	7.42e-172	479.0	COG0584@1|root,COG0584@2|Bacteria,1UY23@1239|Firmicutes,4HEAD@91061|Bacilli,1ZCIE@1386|Bacillus	91061|Bacilli	C	glycerophosphoryl diester phosphodiesterase	yhdW	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD
PHALIAPI_00995	279010.BL02878	3.7e-09	52.4	2BH1X@1|root,32B2D@2|Bacteria,1UB36@1239|Firmicutes,4IMFW@91061|Bacilli,1ZK2I@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein YhdX	yhdX	-	-	-	-	-	-	-	-	-	-	-	yhdX
PHALIAPI_00996	224308.BSU09640	9.73e-239	659.0	COG0668@1|root,COG0668@2|Bacteria,1TR9Z@1239|Firmicutes,4HBDU@91061|Bacilli,1ZBUJ@1386|Bacillus	91061|Bacilli	M	Mechanosensitive ion channel	yhdY	-	-	ko:K16052	-	-	-	-	ko00000,ko02000	1.A.23.4	-	-	MS_channel
PHALIAPI_00997	224308.BSU09650	1.14e-177	494.0	COG0846@1|root,COG0846@2|Bacteria,1TQKD@1239|Firmicutes,4HC4I@91061|Bacilli,1ZB8T@1386|Bacillus	91061|Bacilli	K	NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form	cobB	-	-	ko:K12410	-	-	-	-	ko00000,ko01000	-	-	-	SIR2
PHALIAPI_00998	224308.BSU09660	3.03e-195	542.0	COG0726@1|root,COG0726@2|Bacteria,1TYRH@1239|Firmicutes,4HEQR@91061|Bacilli,1ZEGM@1386|Bacillus	91061|Bacilli	G	deacetylase	nodB1	GO:0005575,GO:0016020	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1,Polysacc_deac_1
PHALIAPI_00999	224308.BSU09670	9.07e-197	546.0	COG0115@1|root,COG0115@2|Bacteria,1TPY2@1239|Firmicutes,4HAWW@91061|Bacilli,1ZBVX@1386|Bacillus	91061|Bacilli	E	Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction	dat	GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019478,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0047810,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607	2.6.1.21	ko:K00824	ko00310,ko00330,ko00360,ko00472,ko00473,ko01100,map00310,map00330,map00360,map00472,map00473,map01100	-	R01148,R01582,R02459,R02851,R02924,R05053	RC00006,RC00008,RC00025	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_4
PHALIAPI_01000	224308.BSU09680	5.97e-302	826.0	COG1757@1|root,COG1757@2|Bacteria,1TQ3B@1239|Firmicutes,4HA18@91061|Bacilli,1ZBQN@1386|Bacillus	91061|Bacilli	C	Na H antiporter	nhaC	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03315	-	-	-	-	ko00000,ko02000	2.A.35	-	-	Na_H_antiporter
PHALIAPI_01001	224308.BSU09690	3.69e-107	310.0	COG0589@1|root,COG0589@2|Bacteria,1V6RY@1239|Firmicutes,4HIZM@91061|Bacilli,1ZHCT@1386|Bacillus	91061|Bacilli	T	Belongs to the universal stress protein A family	nhaX	-	-	-	-	-	-	-	-	-	-	-	Usp
PHALIAPI_01003	224308.BSU09710	0.0	1126.0	COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4HA3S@91061|Bacilli,1ZBXB@1386|Bacillus	91061|Bacilli	V	COG1132 ABC-type multidrug transport system, ATPase and permease components	yheI	-	-	ko:K18216,ko:K18889	ko02010,map02010	M00635,M00707	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	3.A.1,3.A.1.106.13,3.A.1.106.5	-	-	ABC_membrane,ABC_tran
PHALIAPI_01004	224308.BSU09720	0.0	1281.0	COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4HA3S@91061|Bacilli,1ZBIW@1386|Bacillus	91061|Bacilli	V	COG1132 ABC-type multidrug transport system, ATPase and permease components	yheH	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702	-	ko:K06147,ko:K18217,ko:K18890	ko02010,map02010	M00635,M00707	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	3.A.1,3.A.1.106,3.A.1.106.13,3.A.1.106.5,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
PHALIAPI_01005	224308.BSU09730	2.15e-139	394.0	COG0702@1|root,COG0702@2|Bacteria,1TS7J@1239|Firmicutes,4HFT3@91061|Bacilli,1ZGA3@1386|Bacillus	91061|Bacilli	GM	NAD(P)H-binding	yheG	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
PHALIAPI_01006	224308.BSU09750	1.25e-38	129.0	2BX75@1|root,32YCI@2|Bacteria,1VEDY@1239|Firmicutes,4HNHZ@91061|Bacilli,1ZIWS@1386|Bacillus	91061|Bacilli	S	spore protein	sspB	-	-	ko:K06418,ko:K06419,ko:K06420	-	-	-	-	ko00000	-	-	-	SASP
PHALIAPI_01007	224308.BSU09760	2.27e-49	156.0	2E3WD@1|root,32YTI@2|Bacteria,1VGKG@1239|Firmicutes,4HSKD@91061|Bacilli,1ZIY3@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5342)	yheE	-	-	-	-	-	-	-	-	-	-	-	DUF5342
PHALIAPI_01009	224308.BSU09770	0.0	926.0	COG0189@1|root,COG0189@2|Bacteria,1TSWS@1239|Firmicutes,4HCJA@91061|Bacilli,1ZAR6@1386|Bacillus	91061|Bacilli	HJ	YheC/D like ATP-grasp	yheD	GO:0005575,GO:0005623,GO:0042601,GO:0042763,GO:0044464	-	-	-	-	-	-	-	-	-	-	ATPgrasp_YheCD
PHALIAPI_01010	224308.BSU09780	9.67e-276	752.0	COG0189@1|root,COG0189@2|Bacteria,1U4ME@1239|Firmicutes,4HFD2@91061|Bacilli,1ZBNP@1386|Bacillus	91061|Bacilli	HJ	YheC/D like ATP-grasp	yheC	-	-	-	-	-	-	-	-	-	-	-	ATPgrasp_YheCD
PHALIAPI_01011	224308.BSU09790	5.65e-257	706.0	COG4399@1|root,COG4399@2|Bacteria,1TQDH@1239|Firmicutes,4HA30@91061|Bacilli,1ZB1W@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0754 family	yheB	-	-	-	-	-	-	-	-	-	-	-	DUF445
PHALIAPI_01012	224308.BSU09800	7.46e-72	216.0	COG3679@1|root,COG3679@2|Bacteria,1VASS@1239|Firmicutes,4HKKC@91061|Bacilli,1ZH14@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0342 family	yheA	-	-	-	-	-	-	-	-	-	-	-	Com_YlbF
PHALIAPI_01013	224308.BSU09810	1.24e-259	711.0	COG4335@1|root,COG4335@2|Bacteria,1TRE4@1239|Firmicutes,4HA0G@91061|Bacilli,1ZBAW@1386|Bacillus	91061|Bacilli	L	DNA alkylation repair enzyme	yhaZ	-	-	-	-	-	-	-	-	-	-	-	DNA_alkylation
PHALIAPI_01014	224308.BSU09830	8.7e-198	549.0	COG0561@1|root,COG0561@2|Bacteria,1TREF@1239|Firmicutes,4H9Y9@91061|Bacilli,1ZQ4F@1386|Bacillus	91061|Bacilli	S	haloacid dehalogenase-like hydrolase	yhaX	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_3
PHALIAPI_01015	224308.BSU09840	0.0	1006.0	COG0635@1|root,COG0635@2|Bacteria,1TREM@1239|Firmicutes,4HC2D@91061|Bacilli,1ZCRB@1386|Bacillus	91061|Bacilli	H	coproporphyrinogen III oxidase	hemZ	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
PHALIAPI_01016	224308.BSU09850	8.4e-264	726.0	COG0475@1|root,COG0475@2|Bacteria,1TS32@1239|Firmicutes,4HC99@91061|Bacilli,1ZBQT@1386|Bacillus	91061|Bacilli	P	COG0475 Kef-type K transport systems, membrane components	yhaU	-	-	ko:K03455	-	-	-	-	ko00000	2.A.37	-	iYO844.BSU09850	Na_H_Exchanger
PHALIAPI_01017	224308.BSU09860	1.87e-113	325.0	COG0490@1|root,COG0490@2|Bacteria,1V544@1239|Firmicutes,4HIGC@91061|Bacilli,1ZR77@1386|Bacillus	91061|Bacilli	P	regulatory, ligand-binding protein related to C-terminal domains of K channels	-	-	-	ko:K07228	-	-	-	-	ko00000	-	-	-	TrkA_C
PHALIAPI_01019	224308.BSU09880	5.65e-168	471.0	COG1024@1|root,COG1024@2|Bacteria,1TRCQ@1239|Firmicutes,4HDUU@91061|Bacilli,1ZARB@1386|Bacillus	91061|Bacilli	I	enoyl-CoA hydratase	yhaR	-	-	-	-	-	-	-	-	-	-	-	ECH_1
PHALIAPI_01020	224308.BSU09889	2.29e-36	122.0	2E4GP@1|root,32ZBV@2|Bacteria,1VF2A@1239|Firmicutes,4HNUS@91061|Bacilli,1ZIT1@1386|Bacillus	91061|Bacilli	S	YhzD-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YhzD
PHALIAPI_01021	224308.BSU09890	3.22e-214	591.0	COG4152@1|root,COG4152@2|Bacteria,1TR06@1239|Firmicutes,4H9RX@91061|Bacilli,1ZC9T@1386|Bacillus	91061|Bacilli	S	ABC transporter, ATP-binding protein	yhaQ	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran,DUF4162
PHALIAPI_01022	224308.BSU09900	1.47e-271	746.0	COG1668@1|root,COG1668@2|Bacteria,1TXRK@1239|Firmicutes,4HC9K@91061|Bacilli,1ZBM6@1386|Bacillus	91061|Bacilli	CP	COG1668 ABC-type Na efflux pump, permease component	yhaP	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
PHALIAPI_01023	224308.BSU09910	2.38e-294	803.0	COG0420@1|root,COG0420@2|Bacteria,1TWMI@1239|Firmicutes,4HCA0@91061|Bacilli,1ZC5G@1386|Bacillus	91061|Bacilli	L	DNA repair exonuclease	yhaO	-	-	ko:K03547	-	-	-	-	ko00000,ko03400	-	-	-	Metallophos,Metallophos_2
PHALIAPI_01024	224308.BSU09920	0.0	1758.0	COG4717@1|root,COG4717@2|Bacteria,1TQP3@1239|Firmicutes,4HBCA@91061|Bacilli,1ZDHB@1386|Bacillus	91061|Bacilli	L	AAA domain	yhaN	-	-	-	-	-	-	-	-	-	-	-	AAA_27
PHALIAPI_01025	224308.BSU09930	5.22e-228	627.0	COG3481@1|root,COG3481@2|Bacteria,1TPIU@1239|Firmicutes,4HB1M@91061|Bacilli,1ZB1G@1386|Bacillus	91061|Bacilli	L	Shows a 3'-5' exoribonuclease activity	yhaM	GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	-	ko:K03698	-	-	-	-	ko00000,ko01000,ko03019	-	-	-	HD,tRNA_anti-codon
PHALIAPI_01026	224308.BSU09940	1.88e-39	131.0	2DQFN@1|root,336J9@2|Bacteria,1VJ6N@1239|Firmicutes,4HQ0A@91061|Bacilli,1ZK3U@1386|Bacillus	91061|Bacilli	S	Sporulation protein YhaL	yhaL	-	-	-	-	-	-	-	-	-	-	-	Spore_YhaL
PHALIAPI_01027	224308.BSU09950	7.65e-178	499.0	COG0760@1|root,COG0760@2|Bacteria,1TX3R@1239|Firmicutes,4HC85@91061|Bacilli,1ZC6P@1386|Bacillus	91061|Bacilli	M	plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins	prsA	-	5.2.1.8	ko:K01802,ko:K07533	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase_3,Trigger_C
PHALIAPI_01028	224308.BSU09965	8.11e-116	332.0	293PD@1|root,2ZR52@2|Bacteria,1V3PX@1239|Firmicutes,4HI32@91061|Bacilli,1ZFA0@1386|Bacillus	91061|Bacilli	S	Putative zincin peptidase	yhaK	-	-	-	-	-	-	-	-	-	-	-	DUF3267
PHALIAPI_01029	224308.BSU09980	8.48e-73	218.0	2D8K4@1|root,32TRG@2|Bacteria,1VCG9@1239|Firmicutes,4HMCV@91061|Bacilli,1ZJ2C@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1878)	yhaI	-	-	-	-	-	-	-	-	-	-	-	DUF1878
PHALIAPI_01030	224308.BSU09990	4.92e-148	416.0	COG1846@1|root,COG1846@2|Bacteria,1UY04@1239|Firmicutes,4HBQS@91061|Bacilli,1ZBRK@1386|Bacillus	91061|Bacilli	K	Negative regulator of protease production and sporulation	hpr	GO:0000003,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	ko:K09682	-	-	-	-	ko00000,ko03000	-	-	-	MarR
PHALIAPI_01031	224308.BSU10000	3.89e-54	172.0	COG4980@1|root,COG4980@2|Bacteria,1VAKP@1239|Firmicutes,4HKD5@91061|Bacilli,1ZJ3D@1386|Bacillus	91061|Bacilli	S	YtxH-like protein	yhaH	-	-	-	-	-	-	-	-	-	-	-	YtxH
PHALIAPI_01032	720555.BATR1942_02630	9.66e-30	106.0	2BAXH@1|root,324D7@2|Bacteria,1UARY@1239|Firmicutes,4IM4R@91061|Bacilli,1ZJ5E@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01033	224308.BSU10010	3e-102	298.0	2CK8D@1|root,32SBU@2|Bacteria,1VAQG@1239|Firmicutes,4HHGS@91061|Bacilli,1ZF8Y@1386|Bacillus	91061|Bacilli	S	Tryptophan transporter TrpP	trpP	-	-	-	-	-	-	-	-	-	-	iYO844.BSU10010	TrpP
PHALIAPI_01034	224308.BSU10020	3.57e-260	712.0	COG1932@1|root,COG1932@2|Bacteria,1TP6Y@1239|Firmicutes,4HATT@91061|Bacilli,1ZB9N@1386|Bacillus	91061|Bacilli	E	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	serC	GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
PHALIAPI_01035	224308.BSU10030	3.5e-106	305.0	COG0537@1|root,COG0537@2|Bacteria,1V9ZJ@1239|Firmicutes,4HIG2@91061|Bacilli,1ZGI0@1386|Bacillus	91061|Bacilli	FG	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	hit	-	-	ko:K02503	-	-	-	-	ko00000,ko04147	-	-	-	HIT
PHALIAPI_01036	224308.BSU10040	2.7e-176	491.0	COG1131@1|root,COG1131@2|Bacteria,1TQIH@1239|Firmicutes,4HA2B@91061|Bacilli,1ZBAI@1386|Bacillus	91061|Bacilli	V	transporter (ATP-binding protein)	ecsA	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_01037	224308.BSU10050	1.48e-270	743.0	COG4473@1|root,COG4473@2|Bacteria,1V1VG@1239|Firmicutes,4HG1K@91061|Bacilli,1ZBQG@1386|Bacillus	91061|Bacilli	U	ABC transporter	ecsB	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	EcsB
PHALIAPI_01038	224308.BSU10060	1.37e-159	448.0	28I6D@1|root,2Z89E@2|Bacteria,1TQNW@1239|Firmicutes,4HCGQ@91061|Bacilli,1ZAQM@1386|Bacillus	91061|Bacilli	S	EcsC protein family	ecsC	-	-	-	-	-	-	-	-	-	-	-	EcsC
PHALIAPI_01039	224308.BSU10070	1.48e-289	790.0	COG1473@1|root,COG1473@2|Bacteria,1TPD7@1239|Firmicutes,4H9WQ@91061|Bacilli,1ZAR7@1386|Bacillus	91061|Bacilli	E	COG1473 Metal-dependent amidase aminoacylase carboxypeptidase	yhaA	-	-	ko:K01436	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
PHALIAPI_01040	224308.BSU10080	5.44e-312	852.0	COG3069@1|root,COG3069@2|Bacteria,1TQ99@1239|Firmicutes,4H9Q2@91061|Bacilli,1ZCNB@1386|Bacillus	91061|Bacilli	C	membrane	yhfA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01041	1051501.AYTL01000027_gene554	4.07e-44	145.0	COG1592@1|root,COG1592@2|Bacteria,1W59I@1239|Firmicutes,4I0MS@91061|Bacilli,1ZSGB@1386|Bacillus	91061|Bacilli	C	Rubrerythrin	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01042	224308.BSU10100	6.25e-117	334.0	COG2329@1|root,COG2329@2|Bacteria,1V501@1239|Firmicutes,4HHA2@91061|Bacilli,1ZGDD@1386|Bacillus	91061|Bacilli	S	enzyme involved in biosynthesis of extracellular polysaccharides	traP	GO:0005575,GO:0016020	1.14.99.57	ko:K21481	-	-	-	-	ko00000,ko01000	-	-	-	ABM
PHALIAPI_01043	224308.BSU10110	0.0	1411.0	COG0744@1|root,COG0744@2|Bacteria,1TPM5@1239|Firmicutes,4H9SA@91061|Bacilli,1ZAXY@1386|Bacillus	91061|Bacilli	M	penicillin-binding protein	pbpF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.4.1.129,3.4.16.4	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
PHALIAPI_01044	224308.BSU10120	5.25e-259	709.0	COG0407@1|root,COG0407@2|Bacteria,1TR8Q@1239|Firmicutes,4HAXT@91061|Bacilli,1ZDGX@1386|Bacillus	91061|Bacilli	H	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	hemE	GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.37	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03197,R04972	RC00872	ko00000,ko00001,ko00002,ko01000	-	-	-	URO-D
PHALIAPI_01045	224308.BSU10130	3.41e-231	635.0	COG0276@1|root,COG0276@2|Bacteria,1TPKF@1239|Firmicutes,4HAYG@91061|Bacilli,1ZAZ6@1386|Bacillus	91061|Bacilli	H	Catalyzes the ferrous insertion into protoporphyrin IX	hemH	GO:0003674,GO:0003824,GO:0004325,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.99.1.1,4.99.1.9	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R00310,R11329	RC01012	ko00000,ko00001,ko00002,ko01000	-	-	-	Ferrochelatase
PHALIAPI_01046	224308.BSU10140	0.0	923.0	COG1232@1|root,COG1232@2|Bacteria,1TQ6W@1239|Firmicutes,4HAUG@91061|Bacilli,1ZANK@1386|Bacillus	91061|Bacilli	H	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX	hemY	-	1.3.3.15,1.3.3.4	ko:K00231	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03222,R04178	RC00885	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS09325	Amino_oxidase
PHALIAPI_01047	224308.BSU10150	5.79e-132	374.0	COG1309@1|root,COG1309@2|Bacteria,1V2H2@1239|Firmicutes,4HHJD@91061|Bacilli,1ZFYK@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yhgD	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	ko:K09017	-	-	-	-	ko00000,ko03000	-	-	-	TetR_N
PHALIAPI_01048	224308.BSU10160	0.0	922.0	COG1511@1|root,COG1511@2|Bacteria,1TQ15@1239|Firmicutes,4H9T9@91061|Bacilli,1ZBH0@1386|Bacillus	91061|Bacilli	S	YhgE Pip N-terminal domain protein	yhgE	-	-	ko:K01421	-	-	-	-	ko00000	-	-	-	ABC2_membrane_3,DUF3533
PHALIAPI_01049	224308.BSU10170	2.51e-236	649.0	COG0332@1|root,COG0332@2|Bacteria,1TP0K@1239|Firmicutes,4HATK@91061|Bacilli,1ZD2T@1386|Bacillus	91061|Bacilli	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabHB	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
PHALIAPI_01050	224308.BSU10180	1.88e-177	495.0	COG4377@1|root,COG4377@2|Bacteria,1V3UF@1239|Firmicutes,4HEYB@91061|Bacilli,1ZGJV@1386|Bacillus	91061|Bacilli	S	Putative membrane peptidase family (DUF2324)	yhfC	-	-	-	-	-	-	-	-	-	-	-	DUF2324
PHALIAPI_01051	224308.BSU10200	4.44e-252	691.0	COG1363@1|root,COG1363@2|Bacteria,1TQ86@1239|Firmicutes,4HBDK@91061|Bacilli,1ZBP8@1386|Bacillus	91061|Bacilli	G	peptidase M42	yhfE	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M42
PHALIAPI_01052	224308.BSU10210	5.12e-92	269.0	COG4405@1|root,COG4405@2|Bacteria,1VDG5@1239|Firmicutes,4HM8P@91061|Bacilli,1ZKFH@1386|Bacillus	91061|Bacilli	S	ASCH	-	-	-	-	-	-	-	-	-	-	-	-	ASCH
PHALIAPI_01053	224308.BSU10220	4.77e-289	791.0	COG1301@1|root,COG1301@2|Bacteria,1TPME@1239|Firmicutes,4H9T7@91061|Bacilli,1ZCSU@1386|Bacillus	91061|Bacilli	C	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	gltT	-	-	ko:K03309,ko:K11102,ko:K11103	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.23,2.A.23.1.1,2.A.23.1.2,2.A.23.1.3,2.A.23.1.6,2.A.23.1.7	-	iYO844.BSU10220	SDF
PHALIAPI_01054	224308.BSU10240	6.93e-182	505.0	COG1234@1|root,COG1234@2|Bacteria,1V1TF@1239|Firmicutes,4HFNV@91061|Bacilli,1ZCZE@1386|Bacillus	91061|Bacilli	S	COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III	yhfI	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Lactamase_B_2
PHALIAPI_01055	224308.BSU10250	4.06e-245	672.0	COG0095@1|root,COG0095@2|Bacteria,1TQ5U@1239|Firmicutes,4H9P6@91061|Bacilli,1ZBIZ@1386|Bacillus	91061|Bacilli	H	Lipoate-protein ligase	lplJ	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0017118,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:0140096,GO:1901564	6.3.1.20	ko:K03800	ko00785,ko01100,map00785,map01100	-	R07770,R07771,R11143	RC00043,RC00070,RC00090,RC00992,RC02896	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB,Lip_prot_lig_C
PHALIAPI_01056	224308.BSU10260	6.1e-143	404.0	COG0702@1|root,COG0702@2|Bacteria,1TQFS@1239|Firmicutes,4HDA2@91061|Bacilli,1ZBH3@1386|Bacillus	91061|Bacilli	GM	NmrA-like family	yhfK	GO:0005575,GO:0005622,GO:0005623,GO:0044464	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
PHALIAPI_01057	224308.BSU10270	0.0	1030.0	COG0318@1|root,COG0318@2|Bacteria,1TPSX@1239|Firmicutes,4HACS@91061|Bacilli,1ZPZU@1386|Bacillus	91061|Bacilli	IQ	AMP-binding enzyme C-terminal domain	yhfL	-	6.2.1.3	ko:K00666,ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
PHALIAPI_01058	224308.BSU10280	1.13e-84	250.0	29RG4@1|root,30CIX@2|Bacteria,1U9Z4@1239|Firmicutes,4IK71@91061|Bacilli,1ZFIS@1386|Bacillus	91061|Bacilli	-	-	yhfM	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01059	224308.BSU10290	1.47e-302	825.0	COG0501@1|root,COG0501@2|Bacteria,1TRQE@1239|Firmicutes,4HD5G@91061|Bacilli,1ZC4F@1386|Bacillus	91061|Bacilli	O	Peptidase M48	yhfN	GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0070011,GO:0071586,GO:0071704,GO:0080120,GO:0140096,GO:1901564	-	-	-	-	-	-	-	-	-	-	Peptidase_M48,Peptidase_M48_N
PHALIAPI_01060	224308.BSU10300	2.81e-259	712.0	COG1404@1|root,COG1404@2|Bacteria,1TQ2M@1239|Firmicutes,4HBYC@91061|Bacilli,1ZPV5@1386|Bacillus	91061|Bacilli	O	Belongs to the peptidase S8 family	aprE	GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030193,GO:0030195,GO:0032101,GO:0032102,GO:0042730,GO:0043170,GO:0044238,GO:0048519,GO:0048583,GO:0048585,GO:0050789,GO:0050818,GO:0050819,GO:0050878,GO:0051239,GO:0051241,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070011,GO:0071704,GO:0080134,GO:0140096,GO:1900046,GO:1900047,GO:1901564,GO:1903034,GO:1903035	3.4.21.62	ko:K01342,ko:K13277	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000,ko01002,ko03110	-	-	-	Inhibitor_I9,Peptidase_S8,SLH
PHALIAPI_01061	224308.BSU10310	1.49e-61	191.0	COG0454@1|root,COG0456@2|Bacteria,1V3W3@1239|Firmicutes,4HHYX@91061|Bacilli,1ZGJE@1386|Bacillus	91061|Bacilli	K	acetyltransferase	-	GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_01062	224308.BSU10320	2.4e-232	640.0	COG0604@1|root,COG0604@2|Bacteria,1TPGR@1239|Firmicutes,4HACF@91061|Bacilli,1ZCGD@1386|Bacillus	91061|Bacilli	C	Quinone oxidoreductase	yhfP	-	1.1.1.1	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
PHALIAPI_01063	224308.BSU10330	6.25e-220	608.0	COG4594@1|root,COG4594@2|Bacteria,1VQVG@1239|Firmicutes,4HTU4@91061|Bacilli,1ZPXH@1386|Bacillus	91061|Bacilli	M	Periplasmic binding protein	yhfQ	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
PHALIAPI_01064	224308.BSU10340	9.64e-141	397.0	COG0406@1|root,COG0406@2|Bacteria,1V6ES@1239|Firmicutes,4HGZI@91061|Bacilli,1ZDQW@1386|Bacillus	91061|Bacilli	G	Belongs to the phosphoglycerate mutase family	yhfR	-	5.4.2.12	ko:K15634,ko:K15640	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000	-	-	-	His_Phos_1
PHALIAPI_01065	224308.BSU10350	3.49e-249	685.0	COG0183@1|root,COG0183@2|Bacteria,1TP07@1239|Firmicutes,4H9RJ@91061|Bacilli,1ZB7V@1386|Bacillus	91061|Bacilli	I	Belongs to the thiolase family	yhfS	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
PHALIAPI_01066	224308.BSU10360	0.0	922.0	COG0318@1|root,COG0318@2|Bacteria,1TT9C@1239|Firmicutes,4HBQ2@91061|Bacilli,1ZCW8@1386|Bacillus	91061|Bacilli	IQ	AMP-binding enzyme C-terminal domain	vraA	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
PHALIAPI_01067	224308.BSU10370	2.97e-118	339.0	COG1268@1|root,COG1268@2|Bacteria,1VAAD@1239|Firmicutes,4HI8T@91061|Bacilli,1ZC7W@1386|Bacillus	91061|Bacilli	S	BioY family	bioY	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03523	ko02010,map02010	M00581,M00582	-	-	ko00000,ko00001,ko00002,ko02000	2.A.88.1,2.A.88.2	-	-	BioY
PHALIAPI_01068	224308.BSU10380	1.76e-258	714.0	COG0840@1|root,COG0840@2|Bacteria,1TRTV@1239|Firmicutes,4H9M1@91061|Bacilli,1ZBCT@1386|Bacillus	91061|Bacilli	NT	chemotaxis protein	hemAT	GO:0003674,GO:0005488,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0009453,GO:0009454,GO:0009605,GO:0009987,GO:0020037,GO:0023052,GO:0040011,GO:0042221,GO:0042330,GO:0046906,GO:0048037,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0097159,GO:1901363	-	ko:K06595	-	-	-	-	ko00000,ko02035	-	-	-	MCPsignal,Protoglobin
PHALIAPI_01069	224308.BSU10390	0.0	1030.0	COG0665@1|root,COG0723@1|root,COG0665@2|Bacteria,COG0723@2|Bacteria,1TR1R@1239|Firmicutes,4H9V8@91061|Bacilli,1ZC19@1386|Bacillus	91061|Bacilli	CE	COG0665 Glycine D-amino acid oxidases (deaminating)	yhfW	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0044424,GO:0044464,GO:0055114	-	-	-	-	-	-	-	-	-	-	DAO,Rieske
PHALIAPI_01070	224308.BSU10400	6.43e-203	561.0	COG1028@1|root,COG1028@2|Bacteria,1TR53@1239|Firmicutes,4HB8Y@91061|Bacilli,1ZAS0@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	yhxC	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
PHALIAPI_01071	224308.BSU10410	9.84e-45	145.0	2EUKM@1|root,33N2I@2|Bacteria,1VP85@1239|Firmicutes,4HRNF@91061|Bacilli,1ZIVF@1386|Bacillus	91061|Bacilli	S	IDEAL	yhzC	-	-	-	-	-	-	-	-	-	-	-	IDEAL
PHALIAPI_01072	224308.BSU10420	1.27e-140	396.0	COG4903@1|root,COG4903@2|Bacteria,1V4S5@1239|Firmicutes,4HHF4@91061|Bacilli,1ZGB4@1386|Bacillus	91061|Bacilli	K	Competence transcription factor	comK	-	-	ko:K02250	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044,ko03000	-	-	-	ComK
PHALIAPI_01073	224308.BSU10430	8.54e-215	593.0	COG1028@1|root,COG1028@2|Bacteria,1TR53@1239|Firmicutes,4HB8Y@91061|Bacilli,1ZDFM@1386|Bacillus	91061|Bacilli	IQ	Enoyl-(Acyl carrier protein) reductase	yhxD	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
PHALIAPI_01074	224308.BSU10440	6.6e-53	166.0	2E52I@1|root,32ZVS@2|Bacteria,1VEXA@1239|Firmicutes,4HP05@91061|Bacilli,1ZJT0@1386|Bacillus	91061|Bacilli	S	Excalibur calcium-binding domain	yhjA	-	-	-	-	-	-	-	-	-	-	-	Excalibur
PHALIAPI_01075	224308.BSU10450	0.0	907.0	COG0591@1|root,COG0591@2|Bacteria,1TRYH@1239|Firmicutes,4HE2W@91061|Bacilli,1ZCBN@1386|Bacillus	91061|Bacilli	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	yhjB	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
PHALIAPI_01076	224308.BSU10460	1.61e-36	123.0	2EFSS@1|root,339IS@2|Bacteria,1VMRC@1239|Firmicutes,4HR88@91061|Bacilli,1ZKA6@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3311)	yhjC	-	-	-	-	-	-	-	-	-	-	-	DUF3311
PHALIAPI_01077	224308.BSU10470	5.65e-76	227.0	2ATJK@1|root,31J3N@2|Bacteria,1V8E1@1239|Firmicutes,4HK5R@91061|Bacilli,1ZH24@1386|Bacillus	91061|Bacilli	-	-	yhjD	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01078	224308.BSU10480	4.87e-141	399.0	COG0398@1|root,COG0398@2|Bacteria,1TS5T@1239|Firmicutes,4HDKU@91061|Bacilli,1ZCHZ@1386|Bacillus	91061|Bacilli	S	SNARE associated Golgi protein	yhjE	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
PHALIAPI_01079	224308.BSU10490	3.09e-118	338.0	COG0681@1|root,COG0681@2|Bacteria,1V2BJ@1239|Firmicutes,4HGCB@91061|Bacilli,1ZAPC@1386|Bacillus	91061|Bacilli	U	Belongs to the peptidase S26 family	spsB	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
PHALIAPI_01080	224308.BSU10500	0.0	970.0	COG0654@1|root,COG0654@2|Bacteria,1TSDI@1239|Firmicutes,4HAQG@91061|Bacilli,1ZF6C@1386|Bacillus	91061|Bacilli	CH	FAD binding domain	yhjG	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
PHALIAPI_01081	224308.BSU10510	2.82e-122	348.0	COG1846@1|root,COG1846@2|Bacteria,1VXUD@1239|Firmicutes,4HXW7@91061|Bacilli,1ZJI1@1386|Bacillus	91061|Bacilli	K	helix_turn_helix multiple antibiotic resistance protein	yhjH	-	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_01082	224308.BSU10520	4.95e-270	741.0	COG0738@1|root,COG0738@2|Bacteria,1V2RZ@1239|Firmicutes,4I0M2@91061|Bacilli,1ZFFY@1386|Bacillus	91061|Bacilli	G	Major Facilitator Superfamily	glcP	-	-	ko:K08174	-	-	-	-	ko00000,ko02000	2.A.1.7	-	-	MFS_1
PHALIAPI_01083	224308.BSU10530	1.14e-256	703.0	COG0673@1|root,COG0673@2|Bacteria,1TQ72@1239|Firmicutes,4HCS4@91061|Bacilli,1ZCPA@1386|Bacillus	91061|Bacilli	S	Oxidoreductase family, C-terminal alpha/beta domain	-	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249,GO:0055114	1.1.1.18,1.1.1.361,1.1.1.369	ko:K00010,ko:K18652	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	-	R01183,R09951	RC00182	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
PHALIAPI_01084	224308.BSU10540	5.09e-203	561.0	COG0561@1|root,COG0561@2|Bacteria,1V3E0@1239|Firmicutes,4HGK8@91061|Bacilli,1ZBFY@1386|Bacillus	91061|Bacilli	S	Sucrose-6F-phosphate phosphohydrolase	ntdB	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016999,GO:0017000,GO:0017144,GO:0042578,GO:0044237,GO:0044249	3.1.3.24,3.1.3.92	ko:K07024,ko:K18654	ko00500,map00500	-	R00805,R06211	RC00017	ko00000,ko00001,ko01000	-	-	-	S6PP
PHALIAPI_01085	224308.BSU10550	0.0	875.0	COG0399@1|root,COG0399@2|Bacteria,1TPDH@1239|Firmicutes,4HBZ8@91061|Bacilli,1ZCTS@1386|Bacillus	91061|Bacilli	E	Belongs to the DegT DnrJ EryC1 family	-	GO:0003674,GO:0003824,GO:0005488,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009987,GO:0016740,GO:0016769,GO:0016999,GO:0017000,GO:0017144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363	2.6.1.104	ko:K18653	-	-	R10698	RC00006,RC00781	ko00000,ko01000	-	-	-	DegT_DnrJ_EryC1
PHALIAPI_01086	224308.BSU10560	2.52e-238	655.0	COG1609@1|root,COG1609@2|Bacteria,1TQSQ@1239|Firmicutes,4HBNR@91061|Bacilli,1ZC0J@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yhjM	-	-	-	-	-	-	-	-	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
PHALIAPI_01088	224308.BSU10570	1.02e-258	711.0	COG3180@1|root,COG3180@2|Bacteria,1UVXN@1239|Firmicutes,4HDRW@91061|Bacilli,1ZDNB@1386|Bacillus	91061|Bacilli	S	membrane	yhjN	-	-	ko:K07120	-	-	-	-	ko00000	-	-	-	AbrB
PHALIAPI_01089	224308.BSU10580	1.58e-266	732.0	COG0477@1|root,COG0477@2|Bacteria,COG2814@2|Bacteria,1V1U3@1239|Firmicutes,4HBXY@91061|Bacilli,1ZQZT@1386|Bacillus	91061|Bacilli	EGP	Transmembrane secretion effector	-	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_1_like
PHALIAPI_01090	224308.BSU10590	0.0	1148.0	COG4533@1|root,COG4533@2|Bacteria,1TRY2@1239|Firmicutes,4HBZ3@91061|Bacilli,1ZFQC@1386|Bacillus	91061|Bacilli	S	Sugar transport-related sRNA regulator N-term	-	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	-	-	-	-	-	-	-	-	-	SBP_bac_5,SgrR_N
PHALIAPI_01091	224308.BSU10610	2.19e-100	291.0	COG1633@1|root,COG1633@2|Bacteria,1V9AF@1239|Firmicutes,4HIP7@91061|Bacilli,1ZGFE@1386|Bacillus	91061|Bacilli	S	Rubrerythrin	yhjR	-	-	-	-	-	-	-	-	-	-	-	DUF2202,Rubrerythrin
PHALIAPI_01092	224308.BSU10620	0.0	2298.0	COG3857@1|root,COG3857@2|Bacteria,1TQJW@1239|Firmicutes,4HAY6@91061|Bacilli,1ZC70@1386|Bacillus	91061|Bacilli	L	ATP-dependent helicase deoxyribonuclease subunit B	rexB	GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004527,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360	3.6.4.12	ko:K16899	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	Exonuc_V_gamma,PDDEXK_1,UvrD_C
PHALIAPI_01093	224308.BSU10630	0.0	2385.0	COG1074@1|root,COG1074@2|Bacteria,1TQ35@1239|Firmicutes,4HA64@91061|Bacilli,1ZBG6@1386|Bacillus	91061|Bacilli	L	ATP-dependent helicase nuclease subunit A	addA	GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360	3.6.4.12	ko:K16898	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	PDDEXK_1,UvrD-helicase,UvrD_C
PHALIAPI_01094	224308.BSU10640	8.08e-280	765.0	COG0420@1|root,COG0420@2|Bacteria,1TQY6@1239|Firmicutes,4HAKB@91061|Bacilli,1ZBQQ@1386|Bacillus	91061|Bacilli	L	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity	sbcD	-	-	ko:K03547	-	-	-	-	ko00000,ko03400	-	-	-	Metallophos,SbcD_C
PHALIAPI_01095	224308.BSU10650	0.0	1865.0	COG0419@1|root,COG0419@2|Bacteria,1TPCS@1239|Firmicutes,4H9Q3@91061|Bacilli,1ZAP5@1386|Bacillus	91061|Bacilli	L	COG0419 ATPase involved in DNA repair	sbcC	-	-	ko:K03546	-	-	-	-	ko00000,ko03400	-	-	-	AAA_23,AAA_29,SbcCD_C
PHALIAPI_01096	224308.BSU10660	4.51e-65	198.0	COG1403@1|root,COG1403@2|Bacteria,1VFR5@1239|Firmicutes,4HQB5@91061|Bacilli,1ZICY@1386|Bacillus	91061|Bacilli	V	COG1403 Restriction endonuclease	yisB	-	-	-	-	-	-	-	-	-	-	-	HNH
PHALIAPI_01097	224308.BSU10670	3.3e-43	140.0	2DP0U@1|root,3302E@2|Bacteria,1VHZ7@1239|Firmicutes,4HNJQ@91061|Bacilli,1ZIWY@1386|Bacillus	91061|Bacilli	S	Spore germination protein gerPA/gerPF	gerPF	-	-	ko:K06299,ko:K06304	-	-	-	-	ko00000	-	-	-	gerPA
PHALIAPI_01098	224308.BSU10680	3.92e-86	254.0	2EEB8@1|root,3385J@2|Bacteria,1VM15@1239|Firmicutes,4HPJI@91061|Bacilli,1ZJ91@1386|Bacillus	91061|Bacilli	S	Spore germination protein GerPE	gerPE	-	-	ko:K06303	-	-	-	-	ko00000	-	-	-	GerPE
PHALIAPI_01099	224308.BSU10690	1.49e-33	115.0	2C5QJ@1|root,33C5U@2|Bacteria,1VK5Y@1239|Firmicutes,4HR2R@91061|Bacilli,1ZIUX@1386|Bacillus	91061|Bacilli	S	Spore germination protein	gerPD	-	-	ko:K06302	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_01100	224308.BSU10700	3.34e-92	275.0	2EBJR@1|root,335K6@2|Bacteria,1VF1J@1239|Firmicutes,4HNKG@91061|Bacilli,1ZI2K@1386|Bacillus	91061|Bacilli	S	Spore germination protein	gerPC	-	-	ko:K06301	-	-	-	-	ko00000	-	-	-	GerPC
PHALIAPI_01101	1051501.AYTL01000027_gene616	3.87e-42	138.0	2EBHF@1|root,335HY@2|Bacteria,1VHMW@1239|Firmicutes,4HPZZ@91061|Bacilli,1ZIW2@1386|Bacillus	91061|Bacilli	S	cell differentiation	gerPB	-	-	ko:K06300	-	-	-	-	ko00000	-	-	-	GerPB
PHALIAPI_01102	224308.BSU10720	1.82e-45	146.0	2DPJX@1|root,332FH@2|Bacteria,1VF9T@1239|Firmicutes,4HPCA@91061|Bacilli,1ZIV2@1386|Bacillus	91061|Bacilli	S	Spore germination protein	gerPA	GO:0000003,GO:0008150,GO:0009847,GO:0019954,GO:0030436,GO:0032502,GO:0043934	-	ko:K06299	-	-	-	-	ko00000	-	-	-	gerPA
PHALIAPI_01103	224308.BSU10730	1.52e-32	112.0	2DJ46@1|root,304QH@2|Bacteria,1TX0U@1239|Firmicutes,4I5VT@91061|Bacilli,1ZJMR@1386|Bacillus	91061|Bacilli	S	Spo0E like sporulation regulatory protein	yisI	-	-	-	-	-	-	-	-	-	-	-	SpoOE-like
PHALIAPI_01104	224308.BSU10740	1.09e-221	611.0	COG5337@1|root,COG5337@2|Bacteria,1U0PJ@1239|Firmicutes,4HBE4@91061|Bacilli,1ZD5Z@1386|Bacillus	91061|Bacilli	M	Spore Coat	cotH	-	-	ko:K06330	-	-	-	-	ko00000	-	-	-	CotH
PHALIAPI_01105	224308.BSU10750	3.78e-219	604.0	COG0179@1|root,COG0179@2|Bacteria,1TQDQ@1239|Firmicutes,4HCBR@91061|Bacilli,1ZCHF@1386|Bacillus	91061|Bacilli	Q	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	yisK	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
PHALIAPI_01106	224308.BSU10760	1.44e-74	223.0	2CKSS@1|root,32W2Q@2|Bacteria,1VB9W@1239|Firmicutes,4HMC5@91061|Bacilli,1ZHSY@1386|Bacillus	91061|Bacilli	S	UPF0344 protein	yisL	-	-	-	-	-	-	-	-	-	-	-	DUF1516
PHALIAPI_01107	224308.BSU10770	0.0	1644.0	COG1404@1|root,COG1404@2|Bacteria,1TQ2M@1239|Firmicutes,4HB7D@91061|Bacilli,1ZAZE@1386|Bacillus	91061|Bacilli	O	Belongs to the peptidase S8 family	wprA	-	-	ko:K13274	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	Peptidase_S8
PHALIAPI_01108	224308.BSU10780	9.03e-133	376.0	2E4ZB@1|root,32ZT1@2|Bacteria,1VHAC@1239|Firmicutes,4HQBP@91061|Bacilli,1ZD5D@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2777)	yisN	-	-	-	-	-	-	-	-	-	-	-	DUF2777
PHALIAPI_01109	224308.BSU10790	0.0	1277.0	COG0367@1|root,COG0367@2|Bacteria,1TRPB@1239|Firmicutes,4HA44@91061|Bacilli,1ZBY8@1386|Bacillus	91061|Bacilli	E	Asparagine synthase	asnO	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
PHALIAPI_01110	224308.BSU10810	4.02e-151	429.0	COG1562@1|root,COG1562@2|Bacteria,1TQHF@1239|Firmicutes,4HA1A@91061|Bacilli,1ZCIV@1386|Bacillus	91061|Bacilli	I	phytoene	crtM	-	2.5.1.32,2.5.1.99	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	M00097	R02065,R04218,R07270,R10177	RC00362,RC01101,RC02869	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	SQS_PSY
PHALIAPI_01111	224308.BSU10820	2.91e-310	847.0	COG0534@1|root,COG0534@2|Bacteria,1TQMT@1239|Firmicutes,4H9Y2@91061|Bacilli,1ZBQK@1386|Bacillus	91061|Bacilli	V	Mate efflux family protein	yisQ	-	-	-	-	-	-	-	-	-	-	-	MatE
PHALIAPI_01112	224308.BSU10830	2e-207	573.0	COG1917@1|root,COG2207@1|root,COG1917@2|Bacteria,COG2207@2|Bacteria,1UYDC@1239|Firmicutes,4HAAA@91061|Bacilli,1ZCW5@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yisR	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18,HTH_AraC
PHALIAPI_01113	224308.BSU10840	6.13e-234	644.0	COG1609@1|root,COG1609@2|Bacteria,1TQ7K@1239|Firmicutes,4H9V1@91061|Bacilli,1ZQ1E@1386|Bacillus	91061|Bacilli	K	helix_turn _helix lactose operon repressor	rbsR	-	-	ko:K02529,ko:K03484	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
PHALIAPI_01114	224308.BSU10850	1.12e-243	669.0	COG0673@1|root,COG0673@2|Bacteria,1TQJX@1239|Firmicutes,4HDFF@91061|Bacilli,1ZQC0@1386|Bacillus	91061|Bacilli	S	Oxidoreductase family, C-terminal alpha/beta domain	yisS	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006020,GO:0006066,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010033,GO:0016052,GO:0016491,GO:0016614,GO:0016616,GO:0019310,GO:0019751,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0048037,GO:0050662,GO:0050896,GO:0051287,GO:0051716,GO:0055114,GO:0070403,GO:0070404,GO:0070887,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901575,GO:1901615,GO:1901616,GO:1901700,GO:1901701,GO:1902140,GO:1902141	1.1.1.18,1.1.1.369,1.1.1.370	ko:K00010,ko:K16043	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	-	R01183,R09951,R09953	RC00182	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
PHALIAPI_01115	224308.BSU10860	4.05e-119	340.0	COG2318@1|root,COG2318@2|Bacteria,1V51W@1239|Firmicutes,4HIYI@91061|Bacilli,1ZJR9@1386|Bacillus	91061|Bacilli	S	DinB family	yisT	-	-	-	-	-	-	-	-	-	-	-	DinB
PHALIAPI_01116	224308.BSU10870	1.05e-137	390.0	COG1279@1|root,COG1279@2|Bacteria,1V1Q2@1239|Firmicutes,4HFYS@91061|Bacilli,1ZFM6@1386|Bacillus	91061|Bacilli	S	Lysine exporter protein LysE YggA	argO	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015174,GO:0015181,GO:0015318,GO:0015711,GO:0015802,GO:0015807,GO:0015809,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902023,GO:1903825,GO:1903826,GO:1905039,GO:1990822	-	ko:K06895	-	-	-	-	ko00000,ko02000	2.A.75.1	-	-	LysE
PHALIAPI_01117	224308.BSU10880	0.0	948.0	COG1167@1|root,COG1167@2|Bacteria,1TPS5@1239|Firmicutes,4HB1C@91061|Bacilli,1ZASA@1386|Bacillus	91061|Bacilli	K	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	ydfD	-	-	ko:K18907	-	M00700,M00702	-	-	ko00000,ko00002,ko01504,ko03000	-	-	-	Aminotran_1_2,GntR
PHALIAPI_01118	224308.BSU10890	1.76e-95	284.0	COG1357@1|root,COG1357@2|Bacteria,1VAPB@1239|Firmicutes,4HHBX@91061|Bacilli,1ZDT3@1386|Bacillus	91061|Bacilli	S	Pentapeptide repeats (9 copies)	yisX	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide,Pentapeptide_4
PHALIAPI_01119	224308.BSU10900	4.53e-199	550.0	COG2267@1|root,COG2267@2|Bacteria,1TPI0@1239|Firmicutes,4HCKX@91061|Bacilli,1ZEU4@1386|Bacillus	91061|Bacilli	I	hydrolases or acyltransferases (alpha beta hydrolase superfamily)	yisY	-	1.11.1.10	ko:K00433	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_1,Abhydrolase_4
PHALIAPI_01120	224308.BSU10910	4.06e-145	408.0	COG0529@1|root,COG0529@2|Bacteria,1TQXK@1239|Firmicutes,4HB96@91061|Bacilli,1ZBCZ@1386|Bacillus	91061|Bacilli	P	Catalyzes the synthesis of activated sulfate	cysC	GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237	2.7.1.25	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	M00176	R00509,R04928	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	APS_kinase
PHALIAPI_01121	224308.BSU10920	3.78e-293	798.0	COG2046@1|root,COG2046@2|Bacteria,1TR4C@1239|Firmicutes,4HC20@91061|Bacilli,1ZCB4@1386|Bacillus	91061|Bacilli	P	Belongs to the sulfate adenylyltransferase family	sat	-	2.7.7.4	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00529,R04929	RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-sulfurylase,PUA_2
PHALIAPI_01122	224308.BSU10930	2.07e-179	498.0	COG0175@1|root,COG0175@2|Bacteria,1TSMI@1239|Firmicutes,4HA9E@91061|Bacilli,1ZCBJ@1386|Bacillus	91061|Bacilli	EH	Belongs to the PAPS reductase family. CysH subfamily	cysH	GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114	1.8.4.10,1.8.4.8	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R02021	RC00007,RC02862	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15570	PAPS_reduct
PHALIAPI_01123	224308.BSU10940	9.32e-154	432.0	COG2045@1|root,COG2045@2|Bacteria,1TTEV@1239|Firmicutes,4HGDY@91061|Bacilli,1ZFKP@1386|Bacillus	91061|Bacilli	H	Belongs to the ComB family	-	GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545	3.1.3.71	ko:K05979	ko00680,ko01120,map00680,map01120	M00358	R05789	RC00428	ko00000,ko00001,ko00002,ko01000	-	-	-	2-ph_phosp
PHALIAPI_01124	224308.BSU10950	1.75e-179	499.0	COG1809@1|root,COG1809@2|Bacteria,1V20V@1239|Firmicutes,4HDSM@91061|Bacilli,1ZEWC@1386|Bacillus	91061|Bacilli	S	synthase	yitD	-	4.4.1.19	ko:K08097	ko00680,ko01120,map00680,map01120	M00358	R07476	RC01799	ko00000,ko00001,ko00002,ko01000	-	-	-	ComA
PHALIAPI_01125	224308.BSU10960	6.62e-140	396.0	COG1284@1|root,COG1284@2|Bacteria,1V5G7@1239|Firmicutes,4HHDF@91061|Bacilli,1ZBEZ@1386|Bacillus	91061|Bacilli	S	Uncharacterised 5xTM membrane BCR, YitT family COG1284	yitE	-	-	-	-	-	-	-	-	-	-	-	YitT_membrane
PHALIAPI_01126	224308.BSU10970	2.91e-281	767.0	COG4948@1|root,COG4948@2|Bacteria,1TZ0E@1239|Firmicutes,4HDTT@91061|Bacilli	91061|Bacilli	M	Belongs to the mandelate racemase muconate lactonizing enzyme family	yitF	-	5.5.1.27	ko:K18983	ko00053,map00053	-	R10847	RC03287	ko00000,ko00001,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
PHALIAPI_01127	224308.BSU10980	4.1e-291	796.0	COG0477@1|root,COG2814@2|Bacteria,1TQEW@1239|Firmicutes,4HASU@91061|Bacilli,1ZB5B@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	yitG	-	-	ko:K08221	-	-	-	-	ko00000,ko02000	2.A.1.32	-	-	MFS_1,Sugar_tr,TRI12
PHALIAPI_01128	224308.BSU10990	1.57e-197	548.0	COG0454@1|root,COG0454@2|Bacteria,1UHT6@1239|Firmicutes,4IS8U@91061|Bacilli,1ZS32@1386|Bacillus	91061|Bacilli	K	Acetyltransferase (GNAT) domain	yitH	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10
PHALIAPI_01129	224308.BSU11000	1.46e-91	269.0	COG2153@1|root,COG2153@2|Bacteria,1UIYA@1239|Firmicutes,4ISWW@91061|Bacilli	91061|Bacilli	S	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10
PHALIAPI_01130	224308.BSU11010	0.0	1203.0	COG0646@1|root,COG0685@1|root,COG0646@2|Bacteria,COG0685@2|Bacteria,1TPYV@1239|Firmicutes,4HAB5@91061|Bacilli,1ZBGC@1386|Bacillus	91061|Bacilli	E	Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine	yitJ	-	1.5.1.20,2.1.1.10	ko:K00297,ko:K00547	ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523	M00377	R00650,R01224,R07168	RC00003,RC00035,RC00081	ko00000,ko00001,ko00002,ko01000	-	-	-	MTHFR,S-methyl_trans
PHALIAPI_01131	224308.BSU11020	2.73e-55	176.0	COG1666@1|root,COG1666@2|Bacteria,1VQZH@1239|Firmicutes,4HUT5@91061|Bacilli,1ZRBD@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0234 family	yitK	-	-	ko:K09767	-	-	-	-	ko00000	-	-	-	DUF520
PHALIAPI_01132	224308.BSU11030	2.75e-204	565.0	COG2996@1|root,COG2996@2|Bacteria,1TQ1Z@1239|Firmicutes,4HDAZ@91061|Bacilli,1ZASM@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yitL	-	-	ko:K00243	-	-	-	-	ko00000	-	-	-	S1_2
PHALIAPI_01133	224308.BSU11040	1.69e-121	348.0	29TCH@1|root,30EJM@2|Bacteria,1UCNB@1239|Firmicutes,4IP4F@91061|Bacilli,1ZPD0@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01134	224308.BSU11055	1.42e-218	603.0	28UJT@1|root,2ZGQB@2|Bacteria,1VNVF@1239|Firmicutes,4HRVJ@91061|Bacilli,1ZM9H@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01135	224308.BSU11070	3.84e-126	358.0	2CE3Z@1|root,3348B@2|Bacteria,1VF6Z@1239|Firmicutes,4HPIA@91061|Bacilli,1ZPGV@1386|Bacillus	91061|Bacilli	S	Sporulation delaying protein SdpA	-	-	-	-	-	-	-	-	-	-	-	-	SdpA
PHALIAPI_01136	224308.BSU11079	2.08e-77	230.0	COG1695@1|root,COG1695@2|Bacteria,1VXXB@1239|Firmicutes,4HNVK@91061|Bacilli,1ZHYM@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
PHALIAPI_01137	224308.BSU11080	6.11e-120	344.0	2C85J@1|root,2ZKN3@2|Bacteria,1W5AD@1239|Firmicutes,4I1GW@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01138	224308.BSU11090	4.59e-59	182.0	2E6JV@1|root,3316R@2|Bacteria,1VHSE@1239|Firmicutes,4HQJY@91061|Bacilli,1ZIRE@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF3784)	yitR	-	-	-	-	-	-	-	-	-	-	-	DUF3784
PHALIAPI_01139	224308.BSU11100	0.0	1057.0	COG3227@1|root,COG3227@2|Bacteria,1TP08@1239|Firmicutes,4H9S6@91061|Bacilli,1ZCEP@1386|Bacillus	91061|Bacilli	E	Peptidase M4	nprB	GO:0005575,GO:0005576	3.4.24.28	ko:K01400,ko:K08777	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	FTP,PepSY,Peptidase_M4,Peptidase_M4_C
PHALIAPI_01140	224308.BSU11110	1.07e-200	556.0	COG1307@1|root,COG1307@2|Bacteria,1TQDI@1239|Firmicutes,4HAYQ@91061|Bacilli,1ZCK2@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yitS	-	-	-	-	-	-	-	-	-	-	-	DegV
PHALIAPI_01141	224308.BSU11120	2.29e-189	527.0	COG1284@1|root,COG1284@2|Bacteria,1TRBT@1239|Firmicutes,4HBPR@91061|Bacilli,1ZDFA@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein conserved in bacteria (DUF2179)	yitT	-	-	-	-	-	-	-	-	-	-	-	DUF2179,YitT_membrane
PHALIAPI_01142	1051501.AYTL01000027_gene658	2.78e-93	273.0	2AYP4@1|root,339GZ@2|Bacteria,1VFTB@1239|Firmicutes	1239|Firmicutes	S	Intracellular proteinase inhibitor	ipi	-	-	-	-	-	-	-	-	-	-	-	BsuPI
PHALIAPI_01143	224308.BSU11139	1.01e-25	95.5	2EVBZ@1|root,33NSG@2|Bacteria,1VMU1@1239|Firmicutes,4I1MA@91061|Bacilli,1ZIEQ@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3813)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3813
PHALIAPI_01144	935837.JAEK01000025_gene1587	5.49e-08	50.4	2EESV@1|root,338KD@2|Bacteria,1VFET@1239|Firmicutes,4HP8V@91061|Bacilli,1ZIWM@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01145	224308.BSU11140	6.18e-198	548.0	COG0561@1|root,COG0561@2|Bacteria,1TREF@1239|Firmicutes,4H9Y9@91061|Bacilli,1ZC4W@1386|Bacillus	91061|Bacilli	S	hydrolases of the HAD superfamily	yitU	-	3.1.3.104	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R07280	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Hydrolase_3
PHALIAPI_01146	224308.BSU11150	1.19e-183	510.0	COG1073@1|root,COG1073@2|Bacteria,1TTC0@1239|Firmicutes,4HBCG@91061|Bacilli,1ZBIJ@1386|Bacillus	91061|Bacilli	S	COG1073 Hydrolases of the alpha beta superfamily	yitV	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Abhydrolase_1,Hydrolase_4,Peptidase_S9
PHALIAPI_01147	224308.BSU11160	4.63e-68	206.0	COG2151@1|root,COG2151@2|Bacteria,1V9YV@1239|Firmicutes,4HKC6@91061|Bacilli,1ZH2A@1386|Bacillus	91061|Bacilli	S	metal-sulfur cluster biosynthetic enzyme	yitW	-	-	-	-	-	-	-	-	-	-	-	FeS_assembly_P
PHALIAPI_01148	1051501.AYTL01000027_gene664	1.74e-31	110.0	COG0401@1|root,COG0401@2|Bacteria,1VHHJ@1239|Firmicutes,4HPX1@91061|Bacilli,1ZJHE@1386|Bacillus	91061|Bacilli	S	Proteolipid membrane potential modulator	-	-	-	-	-	-	-	-	-	-	-	-	Pmp3
PHALIAPI_01149	224308.BSU11170	0.0	925.0	COG0277@1|root,COG0277@2|Bacteria,1UIU4@1239|Firmicutes,4HBGZ@91061|Bacilli,1ZD7D@1386|Bacillus	91061|Bacilli	C	D-arabinono-1,4-lactone oxidase	yitY	-	-	-	-	-	-	-	-	-	-	-	ALO,FAD_binding_4
PHALIAPI_01150	1051501.AYTL01000027_gene666	1.95e-113	327.0	COG2271@1|root,COG2271@2|Bacteria,1TT4P@1239|Firmicutes,4HDSQ@91061|Bacilli,1ZG23@1386|Bacillus	91061|Bacilli	G	Major Facilitator Superfamily	yitZ	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_01151	224308.BSU11190	2.38e-251	689.0	COG0002@1|root,COG0002@2|Bacteria,1TPVI@1239|Firmicutes,4H9YD@91061|Bacilli,1ZBHP@1386|Bacillus	91061|Bacilli	E	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde	argC	GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.2.1.38	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R03443	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU11190	Semialdhyde_dh,Semialdhyde_dhC
PHALIAPI_01152	224308.BSU11200	3.52e-293	800.0	COG1364@1|root,COG1364@2|Bacteria,1TPBP@1239|Firmicutes,4H9TQ@91061|Bacilli,1ZAU3@1386|Bacillus	91061|Bacilli	E	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate	argJ	GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.3.1.1,2.3.1.35	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028	R00259,R02282	RC00004,RC00064	ko00000,ko00001,ko00002,ko01000	-	-	-	ArgJ
PHALIAPI_01153	224308.BSU11210	1.27e-175	490.0	COG0548@1|root,COG0548@2|Bacteria,1TP0N@1239|Firmicutes,4HH91@91061|Bacilli,1ZF3H@1386|Bacillus	91061|Bacilli	E	Belongs to the acetylglutamate kinase family. ArgB subfamily	argB	GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.8	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028	R02649	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
PHALIAPI_01154	224308.BSU11220	1.62e-276	756.0	COG4992@1|root,COG4992@2|Bacteria,1TP9S@1239|Firmicutes,4H9VZ@91061|Bacilli,1ZC2Y@1386|Bacillus	91061|Bacilli	E	acetylornithine aminotransferase	argD	GO:0003674,GO:0003824,GO:0003992,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
PHALIAPI_01155	224308.BSU11230	9.47e-262	716.0	COG0505@1|root,COG0505@2|Bacteria,1TQ8N@1239|Firmicutes,4HAYC@91061|Bacilli,1ZBBD@1386|Bacillus	91061|Bacilli	F	Carbamoyl-phosphate synthetase glutamine chain	carA	GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	6.3.5.5	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_sm_chain,GATase
PHALIAPI_01156	224308.BSU11240	0.0	2001.0	COG0458@1|root,COG0458@2|Bacteria,1TPID@1239|Firmicutes,4HABE@91061|Bacilli,1ZPZA@1386|Bacillus	91061|Bacilli	EF	Carbamoyl-phosphate synthetase ammonia chain	carB	GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_L_D2,CPSase_L_D3,MGS
PHALIAPI_01157	224308.BSU11250	4.27e-225	620.0	COG0078@1|root,COG0078@2|Bacteria,1TPF2@1239|Firmicutes,4H9X8@91061|Bacilli,1ZC5E@1386|Bacillus	91061|Bacilli	E	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline	argF	GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.1.3.3	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	M00029,M00844	R01398	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
PHALIAPI_01158	224308.BSU11260	2.51e-39	130.0	2EG5I@1|root,339XF@2|Bacteria,1VN1D@1239|Firmicutes,4HRD8@91061|Bacilli,1ZR8P@1386|Bacillus	91061|Bacilli	S	YjzC-like protein	yjzC	-	-	-	-	-	-	-	-	-	-	-	YjzC
PHALIAPI_01159	326423.RBAM_011270	2.17e-23	90.1	2DRQH@1|root,33CMT@2|Bacteria,1VMJ6@1239|Firmicutes,4HR1S@91061|Bacilli	91061|Bacilli	S	Protein of unknown function (DUF2929)	yjzD	-	-	-	-	-	-	-	-	-	-	-	DUF2929
PHALIAPI_01160	224308.BSU11280	1.63e-180	501.0	COG2267@1|root,COG2267@2|Bacteria,1UZM1@1239|Firmicutes,4HFJW@91061|Bacilli,1ZD5F@1386|Bacillus	91061|Bacilli	I	carboxylic ester hydrolase activity	yjaU	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
PHALIAPI_01161	224308.BSU11290	1.49e-131	373.0	29HWM@1|root,30IFG@2|Bacteria,1UIYB@1239|Firmicutes,4ISWX@91061|Bacilli,1ZKCK@1386|Bacillus	91061|Bacilli	-	-	yjaV	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01162	224308.BSU11300	3.7e-234	643.0	COG1744@1|root,COG1744@2|Bacteria,1UY2H@1239|Firmicutes,4HCI5@91061|Bacilli,1ZBN4@1386|Bacillus	91061|Bacilli	S	Transcriptional activator protein med	med	-	-	ko:K05519,ko:K07335	-	-	-	-	ko00000,ko03000	-	-	-	Bmp
PHALIAPI_01163	1051501.AYTL01000027_gene679	1.07e-35	121.0	2C7Y5@1|root,2ZW4E@2|Bacteria,1W5UC@1239|Firmicutes,4HZZW@91061|Bacilli,1ZJ0V@1386|Bacillus	91061|Bacilli	S	ComZ	comZ	-	-	ko:K02254	-	-	-	-	ko00000,ko02044	-	-	-	ComZ
PHALIAPI_01164	224308.BSU11320	9.68e-34	117.0	2BSPY@1|root,32MSR@2|Bacteria,1U2D5@1239|Firmicutes,4IBYU@91061|Bacilli,1ZHZD@1386|Bacillus	91061|Bacilli	-	-	yjzB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01165	224308.BSU11330	4.6e-221	610.0	COG0332@1|root,COG0332@2|Bacteria,1TP0K@1239|Firmicutes,4HATK@91061|Bacilli,1ZAQ1@1386|Bacillus	91061|Bacilli	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	iYO844.BSU11330	ACP_syn_III,ACP_syn_III_C
PHALIAPI_01166	224308.BSU11340	3.06e-302	823.0	COG0304@1|root,COG0304@2|Bacteria,1TPA7@1239|Firmicutes,4H9SD@91061|Bacilli,1ZD02@1386|Bacillus	91061|Bacilli	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	fabF	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	iSB619.SA_RS04785	Ketoacyl-synt_C,ketoacyl-synt
PHALIAPI_01167	224308.BSU11350	9.1e-191	529.0	COG5504@1|root,COG5504@2|Bacteria,1UYP6@1239|Firmicutes,4HFSY@91061|Bacilli,1ZCYK@1386|Bacillus	91061|Bacilli	O	Zn-dependent protease	yjaZ	-	-	-	-	-	-	-	-	-	-	-	DUF2268
PHALIAPI_01168	224308.BSU11360	1.76e-233	642.0	COG0444@1|root,COG0444@2|Bacteria,1TP6E@1239|Firmicutes,4HA4E@91061|Bacilli,1ZB72@1386|Bacillus	91061|Bacilli	P	Belongs to the ABC transporter superfamily	appD	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439,M00566	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.2,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
PHALIAPI_01169	224308.BSU11370	6.93e-236	649.0	COG4608@1|root,COG4608@2|Bacteria,1V36J@1239|Firmicutes,4H9YB@91061|Bacilli,1ZBA4@1386|Bacillus	91061|Bacilli	E	Belongs to the ABC transporter superfamily	appF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
PHALIAPI_01170	326423.RBAM_011380	0.0	1004.0	COG0747@1|root,COG0747@2|Bacteria,1TQ0N@1239|Firmicutes,4HARF@91061|Bacilli,1ZC4E@1386|Bacillus	91061|Bacilli	E	COG0747 ABC-type dipeptide transport system, periplasmic component	appA	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
PHALIAPI_01171	326423.RBAM_011390	1.58e-214	593.0	COG0601@1|root,COG0601@2|Bacteria,1TP1S@1239|Firmicutes,4HATR@91061|Bacilli,1ZCAV@1386|Bacillus	91061|Bacilli	P	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components	appB	GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0022857,GO:0051179,GO:0051234,GO:0055085	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
PHALIAPI_01172	720555.BATR1942_03335	4.25e-197	548.0	COG1173@1|root,COG1173@2|Bacteria,1TP4R@1239|Firmicutes,4HBB9@91061|Bacilli,1ZCNS@1386|Bacillus	91061|Bacilli	EP	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components	appC	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
PHALIAPI_01173	224308.BSU11410	3.18e-190	526.0	28IPR@1|root,2Z8PJ@2|Bacteria,1TPYR@1239|Firmicutes,4HBI7@91061|Bacilli,1ZAX0@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0736 family	yjbA	-	-	-	-	-	-	-	-	-	-	-	DUF3603
PHALIAPI_01174	224308.BSU11420	7.18e-234	644.0	COG0180@1|root,COG0180@2|Bacteria,1TPY7@1239|Firmicutes,4HA1K@91061|Bacilli,1ZCUY@1386|Bacillus	91061|Bacilli	J	Tryptophanyl-tRNA synthetase	trpS	-	6.1.1.2	ko:K01867	ko00970,map00970	M00359,M00360	R03664	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1b
PHALIAPI_01175	224308.BSU11430	0.0	1118.0	COG4166@1|root,COG4166@2|Bacteria,1TNYQ@1239|Firmicutes,4HAMK@91061|Bacilli,1ZBB4@1386|Bacillus	91061|Bacilli	E	ABC transporter substrate-binding protein	oppA	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	SBP_bac_5
PHALIAPI_01176	224308.BSU11440	1.66e-149	425.0	COG0601@1|root,COG0601@2|Bacteria,1TP1S@1239|Firmicutes,4HA2S@91061|Bacilli,1ZAUS@1386|Bacillus	91061|Bacilli	P	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components	oppB	GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0022857,GO:0051179,GO:0051234,GO:0055085	-	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	BPD_transp_1
PHALIAPI_01177	224308.BSU11460	1.54e-230	636.0	COG0444@1|root,COG0444@2|Bacteria,1TP6E@1239|Firmicutes,4HA4E@91061|Bacilli,1ZB72@1386|Bacillus	91061|Bacilli	P	Belongs to the ABC transporter superfamily	oppD	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439,M00566	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.2,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
PHALIAPI_01178	224308.BSU11470	4.43e-220	607.0	COG4608@1|root,COG4608@2|Bacteria,1V36J@1239|Firmicutes,4H9YB@91061|Bacilli,1ZBA4@1386|Bacillus	91061|Bacilli	E	Belongs to the ABC transporter superfamily	oppF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
PHALIAPI_01179	224308.BSU11480	1.94e-259	714.0	COG0477@1|root,COG2814@2|Bacteria,1V9VP@1239|Firmicutes,4HX3Y@91061|Bacilli,1ZS7H@1386|Bacillus	91061|Bacilli	EGP	Major Facilitator Superfamily	yjbB	-	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_01180	224308.BSU11490	2.35e-129	368.0	COG0454@1|root,COG0456@2|Bacteria,1TSZY@1239|Firmicutes,4HAYD@91061|Bacilli,1ZD7N@1386|Bacillus	91061|Bacilli	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	yjbC	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_7
PHALIAPI_01181	224308.BSU11500	1.01e-87	258.0	COG1393@1|root,COG1393@2|Bacteria,1V3QC@1239|Firmicutes,4HH0I@91061|Bacilli,1ZFK4@1386|Bacillus	91061|Bacilli	K	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress	spxA	-	-	ko:K16509	-	-	-	-	ko00000	-	-	-	ArsC
PHALIAPI_01182	224308.BSU11510	2.03e-143	405.0	COG0861@1|root,COG0861@2|Bacteria,1UYA9@1239|Firmicutes,4HETB@91061|Bacilli,1ZRX5@1386|Bacillus	91061|Bacilli	P	Integral membrane protein TerC family	yjbE	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	TerC
PHALIAPI_01183	224308.BSU11520	5.66e-150	422.0	COG4862@1|root,COG4862@2|Bacteria,1UZ7D@1239|Firmicutes,4HDV3@91061|Bacilli,1ZAV4@1386|Bacillus	91061|Bacilli	NOT	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC	mecA	GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496	-	ko:K16511	-	-	-	-	ko00000	-	-	-	MecA
PHALIAPI_01184	224308.BSU11530	7.8e-276	754.0	COG4469@1|root,COG4469@2|Bacteria,1TRGD@1239|Firmicutes,4HFP5@91061|Bacilli,1ZCFD@1386|Bacillus	91061|Bacilli	S	Competence protein	coiA	-	-	ko:K06198	-	-	-	-	ko00000	-	-	-	CoiA
PHALIAPI_01185	224308.BSU11540	0.0	1302.0	COG1164@1|root,COG1164@2|Bacteria,1TP4P@1239|Firmicutes,4HA7X@91061|Bacilli,1ZCHA@1386|Bacillus	91061|Bacilli	E	oligoendopeptidase F	pepF	GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564	-	ko:K08602	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3,Peptidase_M3_N
PHALIAPI_01186	224308.BSU11549	2.68e-28	102.0	2AP4C@1|root,31E5Z@2|Bacteria,1U9RE@1239|Firmicutes,4HSI2@91061|Bacilli,1ZJ77@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01187	224308.BSU11550	1.32e-218	602.0	COG2761@1|root,COG2761@2|Bacteria,1TQ8K@1239|Firmicutes,4HAI8@91061|Bacilli,1ZATS@1386|Bacillus	91061|Bacilli	Q	dithiol-disulfide isomerase involved in polyketide biosynthesis	yjbH	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_5
PHALIAPI_01188	224308.BSU11560	4.97e-93	271.0	COG2346@1|root,COG2346@2|Bacteria,1V6JN@1239|Firmicutes,4HMCZ@91061|Bacilli,1ZQR2@1386|Bacillus	91061|Bacilli	S	Bacterial-like globin	yjbI	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
PHALIAPI_01189	1051501.AYTL01000027_gene706	2.89e-125	362.0	COG0741@1|root,COG0741@2|Bacteria,1V6DD@1239|Firmicutes,4HIWA@91061|Bacilli,1ZH33@1386|Bacillus	91061|Bacilli	M	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)	yjbJ	-	-	-	-	-	-	-	-	-	-	-	SLT
PHALIAPI_01190	224308.BSU11580	4.23e-129	367.0	COG4116@1|root,COG4116@2|Bacteria,1VA56@1239|Firmicutes,4HMNE@91061|Bacilli,1ZH0U@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yjbK	-	-	-	-	-	-	-	-	-	-	-	CYTH
PHALIAPI_01191	224308.BSU11590	1.87e-81	241.0	2E3PJ@1|root,32YMN@2|Bacteria,1VGBJ@1239|Firmicutes,4HNU4@91061|Bacilli,1ZIVU@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0738 family	yjbL	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01192	224308.BSU11600	5.06e-145	409.0	COG2357@1|root,COG2357@2|Bacteria,1TQ2F@1239|Firmicutes,4HA3Q@91061|Bacilli,1ZBM8@1386|Bacillus	91061|Bacilli	S	GTP pyrophosphokinase	yjbM	GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657	2.7.6.5	ko:K07816	ko00230,map00230	-	R00429	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	RelA_SpoT
PHALIAPI_01193	224308.BSU11610	2.94e-194	538.0	COG0061@1|root,COG0061@2|Bacteria,1TRB3@1239|Firmicutes,4HB08@91061|Bacilli,1ZAQP@1386|Bacillus	91061|Bacilli	G	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	nadK	GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100	-	R00104	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS04895	NAD_kinase
PHALIAPI_01194	224308.BSU11620	2.12e-202	561.0	COG0564@1|root,COG0564@2|Bacteria,1TS1T@1239|Firmicutes,4HBRY@91061|Bacilli,1ZB25@1386|Bacillus	91061|Bacilli	J	Responsible for synthesis of pseudouridine from uracil	rluD	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.23,5.4.99.28,5.4.99.29	ko:K06177,ko:K06180	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
PHALIAPI_01195	224308.BSU11630	6.65e-180	500.0	COG0639@1|root,COG0639@2|Bacteria,1TPCI@1239|Firmicutes,4HBD8@91061|Bacilli,1ZBK8@1386|Bacillus	91061|Bacilli	T	Asymmetrically hydrolyzes Ap4p to yield AMP and ATP	prpE	GO:0003674,GO:0003824,GO:0004721,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564	3.1.3.16,3.6.1.41	ko:K01090,ko:K01525	ko00230,map00230	-	R00125	RC00002	ko00000,ko00001,ko01000	-	-	-	Metallophos
PHALIAPI_01196	224308.BSU11640	0.0	1117.0	COG0475@1|root,COG0569@1|root,COG0475@2|Bacteria,COG0569@2|Bacteria,1TS32@1239|Firmicutes,4H9Q5@91061|Bacilli,1ZBJR@1386|Bacillus	91061|Bacilli	P	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	yjbQ	-	-	ko:K03455,ko:K03499	-	-	-	-	ko00000,ko02000	2.A.37,2.A.38.1,2.A.38.4	-	-	Na_H_Exchanger,TrkA_C,TrkA_N
PHALIAPI_01197	224308.BSU11650	1.83e-173	483.0	COG0819@1|root,COG0819@2|Bacteria,1TPK0@1239|Firmicutes,4HCPF@91061|Bacilli,1ZQWS@1386|Bacillus	91061|Bacilli	K	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway	tenA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	3.5.99.2	ko:K03707	ko00730,ko01100,map00730,map01100	-	R02133,R09993	RC00224,RC00652,RC02832	ko00000,ko00001,ko01000,ko03000	-	-	-	TENA_THI-4
PHALIAPI_01198	224308.BSU11660	2.6e-135	384.0	COG0352@1|root,COG0352@2|Bacteria,1V6KJ@1239|Firmicutes,4HIM9@91061|Bacilli,1ZH29@1386|Bacillus	91061|Bacilli	H	Transcriptional regulator TenI	tenI	GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	5.3.99.10	ko:K10810	ko00730,ko01100,map00730,map01100	-	R09977	RC02766	ko00000,ko00001,ko01000,ko03000	-	-	-	TMP-TENI
PHALIAPI_01199	224308.BSU11670	7.36e-274	748.0	COG0665@1|root,COG0665@2|Bacteria,1VTRW@1239|Firmicutes,4HD2K@91061|Bacilli,1ZCZM@1386|Bacillus	91061|Bacilli	E	Glycine oxidase	thiO	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0072527,GO:0072528,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	1.4.3.19,1.4.5.1	ko:K00285,ko:K03153	ko00360,ko00730,ko01100,map00360,map00730,map01100	-	R01374,R07463,R09493	RC00006,RC00025,RC01788	ko00000,ko00001,ko01000	-	-	-	DAO
PHALIAPI_01200	224308.BSU11680	2.18e-41	135.0	COG2104@1|root,COG2104@2|Bacteria	2|Bacteria	H	thiamine diphosphate biosynthetic process	thiS	-	-	ko:K03154	ko04122,map04122	-	-	-	ko00000,ko00001	-	-	iJN678.ycf40	ThiS
PHALIAPI_01201	224308.BSU11690	2.76e-173	484.0	COG2022@1|root,COG2022@2|Bacteria,1TQZ1@1239|Firmicutes,4HBSI@91061|Bacilli,1ZB9S@1386|Bacillus	91061|Bacilli	H	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S	thiG	GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.8.1.10	ko:K03149	ko00730,ko01100,map00730,map01100	-	R10247	RC03096,RC03097,RC03461	ko00000,ko00001,ko01000	-	-	-	ThiG
PHALIAPI_01202	224308.BSU11700	2.41e-235	648.0	COG0476@1|root,COG0476@2|Bacteria,1TQ3U@1239|Firmicutes,4HBGP@91061|Bacilli,1ZBR4@1386|Bacillus	91061|Bacilli	H	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2	thiF	GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779	2.7.7.73,2.7.7.80	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07459	RC00043	ko00000,ko00001,ko01000	-	-	-	ThiF
PHALIAPI_01203	224308.BSU11710	4.85e-191	530.0	COG0351@1|root,COG0351@2|Bacteria,1TQ4A@1239|Firmicutes,4HAAH@91061|Bacilli,1ZCQT@1386|Bacillus	91061|Bacilli	H	Phosphomethylpyrimidine kinase	thiD	-	2.7.1.49,2.7.4.7	ko:K00941	ko00730,ko01100,map00730,map01100	M00127	R03471,R04509	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Phos_pyr_kin
PHALIAPI_01204	224308.BSU11720	1.75e-182	508.0	COG0623@1|root,COG0623@2|Bacteria,1TPVD@1239|Firmicutes,4H9YN@91061|Bacilli,1ZAP0@1386|Bacillus	91061|Bacilli	I	Enoyl- acyl-carrier-protein reductase NADH	fabI	GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006950,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0033554,GO:0036094,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0055114,GO:0065003,GO:0070417,GO:0071704,GO:0071840,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576	1.3.1.10,1.3.1.9	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	M00083,M00572	R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671	RC00052,RC00076,RC00120	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
PHALIAPI_01205	224308.BSU11730	9.87e-102	301.0	2EECC@1|root,3386N@2|Bacteria,1VFWU@1239|Firmicutes,4HQI6@91061|Bacilli,1ZDKY@1386|Bacillus	91061|Bacilli	S	Spore coat protein	yjbX	GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0031160,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	Spore_coat_CotO
PHALIAPI_01206	224308.BSU11740	3.92e-107	308.0	28Q17@1|root,2ZCJP@2|Bacteria,1V1H6@1239|Firmicutes,4HGUD@91061|Bacilli,1ZESU@1386|Bacillus	91061|Bacilli	S	Spore coat protein	cotZ	-	-	ko:K06344	-	-	-	-	ko00000	-	-	-	Spore-coat_CotZ
PHALIAPI_01207	224308.BSU11750	3.12e-124	352.0	29X3J@1|root,30ISA@2|Bacteria,1V4YJ@1239|Firmicutes,4HHNC@91061|Bacilli,1ZDHZ@1386|Bacillus	91061|Bacilli	S	Spore coat protein Z	cotY	-	-	ko:K06343	-	-	-	-	ko00000	-	-	-	Spore-coat_CotZ
PHALIAPI_01208	224308.BSU11760	3.37e-101	295.0	2CFVW@1|root,32S2K@2|Bacteria,1VBNQ@1239|Firmicutes,4HMD7@91061|Bacilli,1ZGPY@1386|Bacillus	91061|Bacilli	S	Spore Coat Protein X and V domain	cotX	-	-	ko:K06342	-	-	-	-	ko00000	-	-	-	Coat_X
PHALIAPI_01209	224308.BSU11770	1.34e-33	119.0	2ARSC@1|root,31H3P@2|Bacteria,1UAGS@1239|Firmicutes,4IKV7@91061|Bacilli,1ZHSG@1386|Bacillus	91061|Bacilli	-	-	cotW	-	-	ko:K06341	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_01210	224308.BSU11780	2.28e-69	211.0	29RIB@1|root,30CMA@2|Bacteria,1UA32@1239|Firmicutes,4IKCH@91061|Bacilli,1ZGFD@1386|Bacillus	91061|Bacilli	S	Spore Coat Protein X and V domain	cotV	-	-	ko:K06340	-	-	-	-	ko00000	-	-	-	Coat_X
PHALIAPI_01211	224308.BSU11790	1.23e-75	226.0	2CDF4@1|root,32RXN@2|Bacteria,1VACE@1239|Firmicutes,4HKM4@91061|Bacilli,1ZHZZ@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1360)	yjcA	-	-	-	-	-	-	-	-	-	-	-	DUF1360
PHALIAPI_01214	224308.BSU11810	5.39e-52	164.0	2E36V@1|root,32Y6J@2|Bacteria,1VFDU@1239|Firmicutes,4HY6K@91061|Bacilli,1ZHWX@1386|Bacillus	91061|Bacilli	S	Stage VI sporulation protein F	spoVIF	-	-	-	-	-	-	-	-	-	-	-	SpoVIF
PHALIAPI_01215	224308.BSU11820	0.0	1511.0	COG0210@1|root,COG0210@2|Bacteria,1TPVG@1239|Firmicutes,4HBVF@91061|Bacilli,1ZCF6@1386|Bacillus	91061|Bacilli	L	DNA helicase	yjcD	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	CoiA,UvrD-helicase,UvrD_C
PHALIAPI_01216	224308.BSU11839	6.31e-51	161.0	29RK5@1|root,30CPB@2|Bacteria,1UA5W@1239|Firmicutes,4IKGI@91061|Bacilli,1ZGY6@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01217	224308.BSU11840	4.49e-93	272.0	COG2153@1|root,COG2153@2|Bacteria,1VA2J@1239|Firmicutes,4HKF5@91061|Bacilli,1ZH1Q@1386|Bacillus	91061|Bacilli	S	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	yjcF	GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10
PHALIAPI_01218	224308.BSU11850	2.43e-121	346.0	COG1514@1|root,COG1514@2|Bacteria,1V2F3@1239|Firmicutes,4HG6P@91061|Bacilli,1ZG9R@1386|Bacillus	91061|Bacilli	J	Belongs to the 2H phosphoesterase superfamily. YjcG family	yjcG	-	-	-	-	-	-	-	-	-	-	-	2_5_RNA_ligase2
PHALIAPI_01219	224308.BSU11860	4.5e-176	490.0	COG2382@1|root,COG2382@2|Bacteria,1UCAC@1239|Firmicutes,4HC02@91061|Bacilli,1ZBAQ@1386|Bacillus	91061|Bacilli	P	COG2382 Enterochelin esterase and related enzymes	yjcH	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase
PHALIAPI_01220	224308.BSU11870	1.98e-273	748.0	COG0626@1|root,COG0626@2|Bacteria,1TPC7@1239|Firmicutes,4HAFQ@91061|Bacilli,1ZAR9@1386|Bacillus	91061|Bacilli	E	cystathionine	metB	GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0016740,GO:0016765,GO:0016829,GO:0016846	2.5.1.48	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017	R00999,R01288,R02508,R03217,R03260,R04944,R04945,R04946	RC00020,RC00056,RC00069,RC00420,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
PHALIAPI_01221	224308.BSU11880	8.72e-279	762.0	COG0626@1|root,COG0626@2|Bacteria,1TPC7@1239|Firmicutes,4HAFQ@91061|Bacilli,1ZAR9@1386|Bacillus	91061|Bacilli	E	cystathionine	metC	GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0016740,GO:0016765,GO:0016829,GO:0016846	4.4.1.8	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R00782,R01286,R02408,R04941	RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU11880	Cys_Met_Meta_PP
PHALIAPI_01222	224308.BSU11890	7.44e-128	363.0	COG1670@1|root,COG1670@2|Bacteria,1V49W@1239|Firmicutes,4HHAP@91061|Bacilli,1ZGG6@1386|Bacillus	91061|Bacilli	J	Alanine acetyltransferase	yjcK	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
PHALIAPI_01223	224308.BSU11900	1.22e-272	747.0	COG5505@1|root,COG5505@2|Bacteria,1TSC8@1239|Firmicutes,4HBJU@91061|Bacilli,1ZCH1@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF819)	yjcL	-	-	-	-	-	-	-	-	-	-	-	DUF819
PHALIAPI_01225	1430331.EP10_16270	2.27e-24	95.5	2BWJU@1|root,340PU@2|Bacteria,1VWNB@1239|Firmicutes,4HX8G@91061|Bacilli,1WHM7@129337|Geobacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01226	66692.ABC3803	8e-52	165.0	2DTIJ@1|root,33KIB@2|Bacteria,1U39A@1239|Firmicutes,4IAD8@91061|Bacilli,1ZK1D@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01227	931276.Cspa_c21790	3.78e-17	78.6	2CBDV@1|root,337BY@2|Bacteria,1VHAK@1239|Firmicutes,252WT@186801|Clostridia,36TS9@31979|Clostridiaceae	186801|Clostridia	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01228	1178540.BA70_19375	6.54e-25	94.4	29RYA@1|root,30D2M@2|Bacteria,1UAR3@1239|Firmicutes,4IM3S@91061|Bacilli,1ZJ20@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01232	720555.BATR1942_01315	7.6e-87	266.0	COG0457@1|root,COG0457@2|Bacteria,1UUXQ@1239|Firmicutes,4I402@91061|Bacilli,1ZDKN@1386|Bacillus	91061|Bacilli	S	Response regulator aspartate phosphatase	-	-	-	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	-	-	TPR_12,TPR_16
PHALIAPI_01233	224308.BSU11970	5.19e-61	187.0	COG1359@1|root,COG1359@2|Bacteria	2|Bacteria	S	Antibiotic biosynthesis monooxygenase	yjcS	GO:0003674,GO:0003824	-	-	-	-	-	-	-	-	-	-	ABM
PHALIAPI_01234	720555.BATR1942_03645	7.54e-62	190.0	2C7E8@1|root,3476F@2|Bacteria,1VYZK@1239|Firmicutes,4HYJE@91061|Bacilli,1ZIN3@1386|Bacillus	91061|Bacilli	-	-	yjcN	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01235	224308.BSU12000	0.0	1242.0	COG1762@1|root,COG3711@1|root,COG1762@2|Bacteria,COG3711@2|Bacteria,1TQT1@1239|Firmicutes,4HB6A@91061|Bacilli,1ZQ0H@1386|Bacillus	91061|Bacilli	GKT	transcriptional antiterminator	manR	-	-	ko:K02538,ko:K03491	-	-	-	-	ko00000,ko03000	-	-	-	HTH_11,Mga,PRD,PTS_EIIA_2,PTS_IIB
PHALIAPI_01236	224308.BSU12010	0.0	1178.0	COG1299@1|root,COG1445@1|root,COG1762@1|root,COG1299@2|Bacteria,COG1445@2|Bacteria,COG1762@2|Bacteria,1TPKU@1239|Firmicutes,4H9KR@91061|Bacilli,1ZC31@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	manP	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563	2.7.1.202	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	M00273	R03232	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.2.1	-	iSB619.SA_RS13955	PTS_EIIA_2,PTS_EIIC,PTS_IIB
PHALIAPI_01237	224308.BSU12020	8.45e-239	655.0	COG1482@1|root,COG1482@2|Bacteria,1VRGI@1239|Firmicutes,4HBFW@91061|Bacilli,1ZDJI@1386|Bacillus	91061|Bacilli	G	mannose-6-phosphate isomerase	manA	-	5.3.1.8	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01819	RC00376	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU12020	PMI_typeI
PHALIAPI_01238	224308.BSU12030	9.24e-76	229.0	28NY7@1|root,2ZBVG@2|Bacteria,1V2J3@1239|Firmicutes,4HMY0@91061|Bacilli,1ZIDK@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2992)	yjdF3	-	-	-	-	-	-	-	-	-	-	-	DUF2992
PHALIAPI_01239	224308.BSU12040	4.21e-116	332.0	COG1670@1|root,COG1670@2|Bacteria,1VB6W@1239|Firmicutes,4HP5I@91061|Bacilli,1ZJ1I@1386|Bacillus	91061|Bacilli	J	Acetyltransferase (GNAT) domain	-	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
PHALIAPI_01241	224308.BSU12060	6.82e-104	301.0	COG2606@1|root,COG2606@2|Bacteria,1V6JF@1239|Firmicutes,4HHFK@91061|Bacilli,1ZGGN@1386|Bacillus	91061|Bacilli	S	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily	ebsC	-	-	ko:K03976	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	tRNA_edit
PHALIAPI_01242	224308.BSU12069	6.12e-40	132.0	2E715@1|root,331JW@2|Bacteria,1VIN9@1239|Firmicutes,4HQH3@91061|Bacilli,1ZJ0A@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF4177)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4177
PHALIAPI_01243	224308.BSU12070	2.31e-69	209.0	2C2RW@1|root,32WKK@2|Bacteria,1VDHU@1239|Firmicutes,4HJU1@91061|Bacilli	91061|Bacilli	S	Domain of unknown function (DUF4306)	yjdJ	-	-	-	-	-	-	-	-	-	-	-	DUF4306
PHALIAPI_01244	224308.BSU12080	3.07e-223	616.0	COG0109@1|root,COG0109@2|Bacteria,1TPS1@1239|Firmicutes,4HBJT@91061|Bacilli,1ZCJT@1386|Bacillus	91061|Bacilli	O	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group	ctaB	GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.141	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	M00154	R07411	RC01786	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	iYO844.BSU12080	UbiA
PHALIAPI_01246	224308.BSU12100	0.0	906.0	COG0726@1|root,COG0726@2|Bacteria,1V6DN@1239|Firmicutes,4HEPH@91061|Bacilli,1ZC54@1386|Bacillus	91061|Bacilli	G	Polysaccharide deacetylase	yjeA	GO:0005575,GO:0016020	3.5.1.104	ko:K22278	-	-	-	-	ko00000,ko01000	-	-	-	DUF3298,DUF4163,Polysacc_deac_1
PHALIAPI_01247	224308.BSU12110	5.87e-104	301.0	2DT08@1|root,33I4U@2|Bacteria,1W0PN@1239|Firmicutes,4HYRZ@91061|Bacilli,1ZMTC@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2690)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2690
PHALIAPI_01248	224308.BSU12120	1.13e-29	105.0	2DR71@1|root,33AGR@2|Bacteria,1VKHI@1239|Firmicutes,4IMK8@91061|Bacilli,1ZKBW@1386|Bacillus	91061|Bacilli	S	Putative motility protein	yjfB	-	-	-	-	-	-	-	-	-	-	-	YjfB_motility
PHALIAPI_01249	224308.BSU12130	4.54e-210	581.0	COG5504@1|root,COG5504@2|Bacteria,1TT7P@1239|Firmicutes,4HH4B@91061|Bacilli,1ZD4T@1386|Bacillus	91061|Bacilli	O	Predicted Zn-dependent protease (DUF2268)	yjfC	-	-	-	-	-	-	-	-	-	-	-	DUF2268
PHALIAPI_01250	224308.BSU12140	1.38e-59	185.0	COG0642@1|root,COG2205@2|Bacteria,1VBSA@1239|Firmicutes,4HKPR@91061|Bacilli,1ZHY1@1386|Bacillus	91061|Bacilli	T	Protein of unknown function (DUF2809)	yjgA	-	-	-	-	-	-	-	-	-	-	-	DUF2809
PHALIAPI_01251	224308.BSU12150	4.08e-132	375.0	2E0RN@1|root,32W9R@2|Bacteria,1VBGS@1239|Firmicutes,4HKSB@91061|Bacilli,1ZIAP@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF4309)	yjgB	-	-	-	-	-	-	-	-	-	-	-	DUF4309
PHALIAPI_01252	224308.BSU12160	0.0	2006.0	COG3383@1|root,COG3383@2|Bacteria,1TT6D@1239|Firmicutes,4IS5E@91061|Bacilli,1ZS18@1386|Bacillus	91061|Bacilli	C	formate dehydrogenase (NAD+) activity	yjgC	GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0048037,GO:0051536,GO:0051540,GO:0055114	1.17.1.9	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	Fer2_4,Fer4,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3
PHALIAPI_01253	224308.BSU12170	1.6e-122	350.0	COG2427@1|root,COG2427@2|Bacteria,1VDZ4@1239|Firmicutes,4HP7W@91061|Bacilli,1ZDHJ@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1641)	yjgD	-	-	-	-	-	-	-	-	-	-	-	DUF1641
PHALIAPI_01255	224308.BSU12190	2.25e-127	366.0	COG1051@1|root,COG1051@2|Bacteria,1U7WX@1239|Firmicutes,4HHQT@91061|Bacilli,1ZD9E@1386|Bacillus	91061|Bacilli	F	ADP-ribose pyrophosphatase	yjhB	-	3.6.1.13	ko:K01515	ko00230,map00230	-	R01054	RC00002	ko00000,ko00001,ko01000	-	-	-	NUDIX,Nudix_N
PHALIAPI_01257	224308.BSU12210	4.35e-282	771.0	COG2124@1|root,COG2124@2|Bacteria,1TPWZ@1239|Firmicutes,4HAGS@91061|Bacilli,1ZC1Y@1386|Bacillus	91061|Bacilli	C	Cytochrome P450	yjiB	GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005506,GO:0006066,GO:0006082,GO:0006629,GO:0006706,GO:0006707,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008395,GO:0009056,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016042,GO:0016053,GO:0016125,GO:0016127,GO:0016491,GO:0016705,GO:0016709,GO:0016713,GO:0017144,GO:0018130,GO:0019752,GO:0020037,GO:0032787,GO:0034641,GO:0036199,GO:0042364,GO:0042440,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0046148,GO:0046164,GO:0046394,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1902652	1.14.14.46,1.14.15.13	ko:K15468,ko:K16593,ko:K17474	ko00780,ko01100,map00780,map01100	M00573	R10123	-	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	-	-	-	p450
PHALIAPI_01258	224308.BSU12220	4.84e-277	758.0	COG1819@1|root,COG1819@2|Bacteria,1TSPC@1239|Firmicutes,4HB9I@91061|Bacilli,1ZB3Z@1386|Bacillus	91061|Bacilli	CG	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase	yjiC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008194,GO:0016740,GO:0016757,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464	-	-	-	-	-	-	-	-	-	-	Glyco_tran_28_C,UDPGT
PHALIAPI_01259	224308.BSU12229	1.11e-41	136.0	28XHF@1|root,2ZJEU@2|Bacteria,1W6IS@1239|Firmicutes,4HZXN@91061|Bacilli,1ZJZF@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01260	224308.BSU12230	2.38e-184	513.0	COG1587@1|root,COG1587@2|Bacteria,1V0K1@1239|Firmicutes,4HFWP@91061|Bacilli,1ZCRM@1386|Bacillus	91061|Bacilli	H	Uroporphyrinogen-III synthase	hemD	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
PHALIAPI_01261	224308.BSU12240	7.08e-136	388.0	COG0390@1|root,COG0390@2|Bacteria,1UY1N@1239|Firmicutes,4HDM4@91061|Bacilli,1ZB6C@1386|Bacillus	91061|Bacilli	S	transport system, permease component	ybbM	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0009987,GO:0015075,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0030003,GO:0031224,GO:0031226,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071944,GO:0098771	-	ko:K02069	-	M00211	-	-	ko00000,ko00002,ko02000	9.B.25.1	-	-	UPF0014
PHALIAPI_01262	224308.BSU12250	7.36e-171	478.0	COG1117@1|root,COG1117@2|Bacteria,1V2UH@1239|Firmicutes,4HDCU@91061|Bacilli,1ZPYW@1386|Bacillus	91061|Bacilli	P	ATPases associated with a variety of cellular activities	yjkB	-	-	ko:K02068	-	M00211	-	-	ko00000,ko00002,ko02000	-	-	-	ABC_tran
PHALIAPI_01263	224308.BSU12260	2.99e-223	616.0	COG0697@1|root,COG0697@2|Bacteria,1TP9B@1239|Firmicutes,4H9TT@91061|Bacilli,1ZB35@1386|Bacillus	91061|Bacilli	EG	Putative multidrug resistance efflux transporter	yjlA	-	-	-	-	-	-	-	-	-	-	-	EmrE
PHALIAPI_01264	224308.BSU12270	7.33e-120	342.0	COG4297@1|root,COG4297@2|Bacteria,1V6MJ@1239|Firmicutes,4HJGB@91061|Bacilli,1ZGYD@1386|Bacillus	91061|Bacilli	S	Cupin domain	yjlB	-	-	-	-	-	-	-	-	-	-	-	Cupin_1,Cupin_2
PHALIAPI_01265	224308.BSU12280	1.39e-87	258.0	COG2427@1|root,32RCT@2|Bacteria,1V7FZ@1239|Firmicutes,4HK07@91061|Bacilli,1ZR46@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1641)	yjlC	-	-	-	-	-	-	-	-	-	-	-	DUF1641
PHALIAPI_01266	224308.BSU12290	3.56e-279	763.0	COG1252@1|root,COG1252@2|Bacteria,1TR6X@1239|Firmicutes,4HA14@91061|Bacilli,1ZAV9@1386|Bacillus	91061|Bacilli	C	NADH dehydrogenase	yjlD	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	iYO844.BSU12290	Pyr_redox_2
PHALIAPI_01267	224308.BSU12300	0.0	952.0	COG1904@1|root,COG1904@2|Bacteria,1TRI0@1239|Firmicutes,4HCGI@91061|Bacilli,1ZBR3@1386|Bacillus	91061|Bacilli	G	glucuronate isomerase	uxaC	-	5.3.1.12	ko:K01812	ko00040,ko01100,map00040,map01100	M00061,M00631	R01482,R01983	RC00376	ko00000,ko00001,ko00002,ko01000	-	-	-	UxaC
PHALIAPI_01268	224308.BSU12310	4.34e-314	857.0	COG2211@1|root,COG2211@2|Bacteria,1TRYR@1239|Firmicutes,4HUTW@91061|Bacilli,1ZR5M@1386|Bacillus	91061|Bacilli	G	symporter YjmB	-	-	-	ko:K03292	-	-	-	-	ko00000	2.A.2	-	-	MFS_2
PHALIAPI_01269	224308.BSU12320	1.03e-241	664.0	COG2055@1|root,COG2055@2|Bacteria,1TR0Z@1239|Firmicutes,4HB6X@91061|Bacilli,1ZB9H@1386|Bacillus	91061|Bacilli	C	Belongs to the LDH2 MDH2 oxidoreductase family	allD	-	1.1.1.350	ko:K00073	ko00230,ko01120,map00230,map01120	-	R02935,R02936	RC00169	ko00000,ko00001,ko01000	-	-	-	Ldh_2
PHALIAPI_01270	224308.BSU12330	1.35e-238	656.0	COG1063@1|root,COG1063@2|Bacteria,1TS6I@1239|Firmicutes,4HBDT@91061|Bacilli,1ZCJC@1386|Bacillus	91061|Bacilli	E	Alcohol dehydrogenase GroES-like domain	yjmD	-	1.1.1.380	ko:K08322	ko00040,ko01100,map00040,map01100	-	R10848	RC00085	ko00000,ko00001,ko01000	-	-	iYO844.BSU12330	ADH_N,ADH_zinc_N
PHALIAPI_01271	224308.BSU12340	9.24e-272	742.0	COG1312@1|root,COG1312@2|Bacteria,1TP5F@1239|Firmicutes,4H9UR@91061|Bacilli,1ZD3F@1386|Bacillus	91061|Bacilli	G	Catalyzes the dehydration of D-mannonate	uxuA	GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
PHALIAPI_01272	224308.BSU12350	2.6e-194	539.0	COG1028@1|root,COG1028@2|Bacteria,1TQ3V@1239|Firmicutes,4HBSW@91061|Bacilli,1ZBI3@1386|Bacillus	91061|Bacilli	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	yjmF	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
PHALIAPI_01273	224308.BSU12360	1.37e-289	792.0	COG2271@1|root,COG2271@2|Bacteria,1TP6X@1239|Firmicutes,4HEVA@91061|Bacilli,1ZC6J@1386|Bacillus	91061|Bacilli	G	Sugar (and other) transporter	exuT	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0044425,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K03535,ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.1,2.A.1.14.2	-	iYO844.BSU02480	MFS_1
PHALIAPI_01274	224308.BSU12370	4.02e-237	652.0	COG1609@1|root,COG1609@2|Bacteria,1UCPU@1239|Firmicutes,4HDJ7@91061|Bacilli,1ZQ1F@1386|Bacillus	91061|Bacilli	K	transcriptional	exuR	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
PHALIAPI_01275	224308.BSU12380	0.0	973.0	COG0246@1|root,COG0246@2|Bacteria,1TPZU@1239|Firmicutes,4HCQC@91061|Bacilli,1ZCF4@1386|Bacillus	91061|Bacilli	G	tagaturonate reductase activity	uxaB	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009026,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575	1.1.1.58	ko:K00041	ko00040,ko01100,map00040,map01100	M00631	R02555	RC00085	ko00000,ko00001,ko00002,ko01000	-	-	-	Mannitol_dh,Mannitol_dh_C
PHALIAPI_01276	224308.BSU12390	0.0	976.0	COG2721@1|root,COG2721@2|Bacteria,1TPTX@1239|Firmicutes,4HAQZ@91061|Bacilli,1ZB6X@1386|Bacillus	91061|Bacilli	G	Altronate	uxaA	GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0008789,GO:0008867,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019577,GO:0019579,GO:0019580,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046392,GO:0046395,GO:0046396,GO:0046397,GO:0071704,GO:0072329,GO:1901575	4.2.1.42,4.2.1.7	ko:K01685,ko:K01708	ko00040,ko00053,ko01100,map00040,map00053,map01100	M00631	R01540,R05608	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU02510	GD_AH_C,SAF
PHALIAPI_01277	224308.BSU12400	4.56e-167	468.0	COG0730@1|root,COG0730@2|Bacteria,1TQFD@1239|Firmicutes,4HBT4@91061|Bacilli,1ZDN3@1386|Bacillus	91061|Bacilli	S	membrane transporter protein	yjnA	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
PHALIAPI_01278	224308.BSU12410	6.65e-104	300.0	COG2318@1|root,COG2318@2|Bacteria,1V359@1239|Firmicutes,4HGA1@91061|Bacilli,1ZH6K@1386|Bacillus	91061|Bacilli	S	DinB family	yjoA	-	-	-	-	-	-	-	-	-	-	-	DinB
PHALIAPI_01279	224308.BSU12420	7.1e-313	851.0	COG0465@1|root,COG0465@2|Bacteria,1TPA8@1239|Firmicutes,4HDJY@91061|Bacilli,1ZBWY@1386|Bacillus	91061|Bacilli	O	AAA domain (dynein-related subfamily)	VCP	-	-	-	-	-	-	-	-	-	-	-	AAA
PHALIAPI_01280	1051501.AYTL01000027_gene816	1.73e-271	743.0	COG0457@1|root,COG0457@2|Bacteria,1UUXQ@1239|Firmicutes,4I402@91061|Bacilli,1ZDKN@1386|Bacillus	91061|Bacilli	S	Response regulator aspartate phosphatase	rapA	-	-	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	-	-	TPR_12,TPR_16
PHALIAPI_01282	224308.BSU12450	1.79e-55	172.0	COG2350@1|root,COG2350@2|Bacteria,1VYYQ@1239|Firmicutes,4HY97@91061|Bacilli	91061|Bacilli	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
PHALIAPI_01283	224308.BSU12460	7.58e-218	602.0	COG1388@1|root,COG3409@1|root,COG5632@1|root,COG1388@2|Bacteria,COG3409@2|Bacteria,COG5632@2|Bacteria,1V5B9@1239|Firmicutes,4HJY4@91061|Bacilli,1ZIM6@1386|Bacillus	91061|Bacilli	M	N-acetylmuramoyl-L-alanine amidase	xlyB	-	3.5.1.28	ko:K01447	-	-	R04112	RC00064,RC00141	ko00000,ko01000	-	-	-	Amidase_2,LysM,PG_binding_1
PHALIAPI_01284	224308.BSU12470	1.07e-77	232.0	arCOG12631@1|root,3172B@2|Bacteria,1V77G@1239|Firmicutes,4HJ0W@91061|Bacilli,1ZH97@1386|Bacillus	91061|Bacilli	S	Bacterial PH domain	yjqA	-	-	-	-	-	-	-	-	-	-	-	bPH_1
PHALIAPI_01285	224308.BSU12480	1.41e-141	399.0	COG4195@1|root,COG4195@2|Bacteria,1VBQ5@1239|Firmicutes,4HK5Q@91061|Bacilli,1ZQV8@1386|Bacillus	91061|Bacilli	S	Pfam:DUF867	yjqB	-	-	-	-	-	-	-	-	-	-	-	Gamma_PGA_hydro
PHALIAPI_01286	224308.BSU12490	4.54e-204	564.0	COG3546@1|root,COG3546@2|Bacteria,1TQVQ@1239|Firmicutes,4H9XR@91061|Bacilli,1ZBZ9@1386|Bacillus	91061|Bacilli	P	Catalase	yjqC	GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716	-	ko:K07217	-	-	-	-	ko00000	-	-	-	Mn_catalase
PHALIAPI_01287	224308.BSU12500	6e-142	400.0	COG2856@1|root,COG2856@2|Bacteria,1VF4T@1239|Firmicutes,4HP2V@91061|Bacilli,1ZIKA@1386|Bacillus	91061|Bacilli	E	IrrE N-terminal-like domain	xkdA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M78
PHALIAPI_01288	224308.BSU12510	2.01e-74	223.0	COG1396@1|root,COG1396@2|Bacteria,1VK84@1239|Firmicutes,4HRBT@91061|Bacilli,1ZISZ@1386|Bacillus	91061|Bacilli	K	Helix-turn-helix XRE-family like proteins	xre	-	-	-	-	-	-	-	-	-	-	-	HTH_19,HTH_3
PHALIAPI_01290	224308.BSU12520	1.57e-199	552.0	COG1522@1|root,COG1522@2|Bacteria,1VVNW@1239|Firmicutes,4HWH8@91061|Bacilli,1ZFTW@1386|Bacillus	91061|Bacilli	K	sequence-specific DNA binding	xkdB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01291	224308.BSU12530	5.04e-151	426.0	COG1484@1|root,COG1484@2|Bacteria,1V48P@1239|Firmicutes,4HJWT@91061|Bacilli,1ZG1R@1386|Bacillus	91061|Bacilli	L	Bacterial dnaA  protein	xkdC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0022616,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576	-	-	-	-	-	-	-	-	-	-	IstB_IS21
PHALIAPI_01295	224308.BSU12560	1.91e-108	313.0	COG1595@1|root,COG1595@2|Bacteria,1VAEY@1239|Firmicutes,4HMVP@91061|Bacilli,1ZJ9T@1386|Bacillus	91061|Bacilli	K	COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog	xpf	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r4_2
PHALIAPI_01296	224308.BSU12570	6.8e-179	499.0	COG3728@1|root,COG5484@1|root,COG3728@2|Bacteria,COG5484@2|Bacteria,1V8HJ@1239|Firmicutes,4HJ4Z@91061|Bacilli,1ZEK7@1386|Bacillus	91061|Bacilli	L	phage terminase small subunit	xtmA	-	-	ko:K07474	-	-	-	-	ko00000	-	-	-	Ftsk_gamma,Phage_terminase,Terminase_2
PHALIAPI_01297	224308.BSU12580	0.0	869.0	COG1783@1|root,COG1783@2|Bacteria,1TRQP@1239|Firmicutes,4HDMY@91061|Bacilli,1ZCXF@1386|Bacillus	91061|Bacilli	S	phage terminase, large subunit	xtmB	-	-	ko:K06909	-	-	-	-	ko00000	-	-	-	Terminase_3,Terminase_3C
PHALIAPI_01298	224308.BSU12590	0.0	973.0	COG5518@1|root,COG5518@2|Bacteria,1TT5R@1239|Firmicutes,4HEHM@91061|Bacilli,1ZE9D@1386|Bacillus	91061|Bacilli	S	portal protein	yqbA	-	-	-	-	-	-	-	-	-	-	-	Phage_portal
PHALIAPI_01299	224308.BSU12600	5.71e-176	493.0	COG0338@1|root,COG0338@2|Bacteria,1V1FT@1239|Firmicutes,4HGCH@91061|Bacilli,1ZEM9@1386|Bacillus	91061|Bacilli	L	Putative phage serine protease XkdF	xkdF3	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S78_2
PHALIAPI_01300	224308.BSU12610	3.91e-217	600.0	COG4653@1|root,COG4653@2|Bacteria,1V0XG@1239|Firmicutes,4HN8Z@91061|Bacilli,1ZCB6@1386|Bacillus	91061|Bacilli	S	Phage capsid family	xkdG	-	-	-	-	-	-	-	-	-	-	-	Phage_capsid
PHALIAPI_01301	224308.BSU12619	9.44e-82	242.0	2ESBD@1|root,33JW4@2|Bacteria,1VP51@1239|Firmicutes,4HYYW@91061|Bacilli	91061|Bacilli	S	Protein of unknown function (DUF3199)	yqbG	-	-	-	-	-	-	-	-	-	-	-	DUF3199
PHALIAPI_01302	224308.BSU12620	4.29e-85	250.0	2EHGE@1|root,33B8A@2|Bacteria,1VKQF@1239|Firmicutes,4HZ7D@91061|Bacilli	91061|Bacilli	S	Domain of unknown function (DUF3599)	yqbH	-	-	-	-	-	-	-	-	-	-	-	DUF3599
PHALIAPI_01303	224308.BSU12630	6.82e-114	326.0	2EFQM@1|root,30H1B@2|Bacteria,1TYGV@1239|Firmicutes,4HZQ3@91061|Bacilli,1ZFEH@1386|Bacillus	91061|Bacilli	S	Bacteriophage HK97-gp10, putative tail-component	xkdI	-	-	-	-	-	-	-	-	-	-	-	HK97-gp10_like
PHALIAPI_01304	224308.BSU12640	6.78e-100	290.0	28Y6W@1|root,2ZK27@2|Bacteria,1W3G3@1239|Firmicutes,4I0HC@91061|Bacilli,1ZFEX@1386|Bacillus	91061|Bacilli	-	-	xkdJ	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01305	224308.BSU12650	0.0	891.0	28IGV@1|root,2Z8I6@2|Bacteria,1TP1Y@1239|Firmicutes,4HFJP@91061|Bacilli,1ZJRF@1386|Bacillus	91061|Bacilli	S	Phage tail sheath C-terminal domain	xkdK	-	-	-	-	-	-	-	-	-	-	-	Phage_sheath_1,Phage_sheath_1C,Phage_sheath_1N
PHALIAPI_01306	224308.BSU12660	6.01e-99	287.0	2CBAP@1|root,32S1D@2|Bacteria,1VEC7@1239|Firmicutes,4IRT1@91061|Bacilli,1ZEZD@1386|Bacillus	91061|Bacilli	S	Phage tail tube protein	xkdM	-	-	-	-	-	-	-	-	-	-	-	DUF2001
PHALIAPI_01307	224308.BSU12671	3.34e-101	293.0	2DQYD@1|root,339DA@2|Bacteria,1VIHA@1239|Firmicutes,4HS2Z@91061|Bacilli,1ZDQV@1386|Bacillus	91061|Bacilli	S	Phage XkdN-like tail assembly chaperone protein, TAC	-	-	-	-	-	-	-	-	-	-	-	-	Phage_TAC_5
PHALIAPI_01308	224308.BSU12680	0.0	1617.0	COG3953@1|root,COG5412@1|root,COG3953@2|Bacteria,COG5412@2|Bacteria,1VAT4@1239|Firmicutes,4HMYI@91061|Bacilli,1ZFFP@1386|Bacillus	91061|Bacilli	L	Transglycosylase SLT domain	xkdO	-	-	-	-	-	-	-	-	-	-	-	SLT
PHALIAPI_01309	224308.BSU12690	2.82e-155	436.0	COG1652@1|root,COG1652@2|Bacteria,1V1BA@1239|Firmicutes,4HFRJ@91061|Bacilli,1ZD2J@1386|Bacillus	91061|Bacilli	S	Lysin motif	xkdP	-	-	-	-	-	-	-	-	-	-	-	LysM
PHALIAPI_01310	224308.BSU12700	2.7e-231	637.0	COG4193@1|root,COG4193@2|Bacteria,1VAT1@1239|Firmicutes,4HQVE@91061|Bacilli,1ZBZG@1386|Bacillus	91061|Bacilli	G	NLP P60 protein	xkdQ	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01311	1051501.AYTL01000027_gene851	3.56e-52	164.0	29RS3@1|root,30CVT@2|Bacteria,1UAFU@1239|Firmicutes,4IKU7@91061|Bacilli,1ZHKX@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2577)	xkdR	-	-	-	-	-	-	-	-	-	-	-	DUF2577
PHALIAPI_01312	224308.BSU12720	1.33e-90	266.0	COG3628@1|root,COG3628@2|Bacteria,1VJ3Z@1239|Firmicutes,4HPXD@91061|Bacilli,1ZG3F@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2634)	xkdS	-	-	-	-	-	-	-	-	-	-	-	DUF2634
PHALIAPI_01313	224308.BSU12730	2.54e-243	669.0	COG3299@1|root,COG3299@2|Bacteria,1TQZU@1239|Firmicutes,4HCTP@91061|Bacilli,1ZB2D@1386|Bacillus	91061|Bacilli	S	Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Baseplate_J
PHALIAPI_01314	224308.BSU12740	3.23e-134	380.0	COG3778@1|root,COG3778@2|Bacteria,1VKFB@1239|Firmicutes,4HSXC@91061|Bacilli,1ZGZU@1386|Bacillus	91061|Bacilli	S	Uncharacterised protein conserved in bacteria (DUF2313)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2313
PHALIAPI_01315	224308.BSU12749	2.11e-54	170.0	2EKUT@1|root,33EIE@2|Bacteria,1VMJP@1239|Firmicutes,4HR3P@91061|Bacilli,1ZP25@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01316	1051501.AYTL01000027_gene856	0.0	1153.0	292XD@1|root,2ZQEV@2|Bacteria,1V48I@1239|Firmicutes,4HS4X@91061|Bacilli,1ZFE2@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01317	1051501.AYTL01000027_gene857	4.81e-55	173.0	2BREE@1|root,32KD7@2|Bacteria,1U22K@1239|Firmicutes,4IBJV@91061|Bacilli,1ZH0P@1386|Bacillus	91061|Bacilli	S	XkdW protein	xkdW	-	-	-	-	-	-	-	-	-	-	-	XkdW
PHALIAPI_01318	224308.BSU12770	6.35e-31	108.0	29RZE@1|root,30D3R@2|Bacteria,1UAT1@1239|Firmicutes,4IM5V@91061|Bacilli,1ZJ9F@1386|Bacillus	91061|Bacilli	-	-	xkdX	-	-	-	-	-	-	-	-	-	-	-	Phage_XkdX
PHALIAPI_01319	224308.BSU12780	2.31e-193	537.0	29TBY@1|root,30EJ0@2|Bacteria,1UCMF@1239|Firmicutes,4IP3K@91061|Bacilli,1ZPBV@1386|Bacillus	91061|Bacilli	-	-	xepA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01320	224308.BSU12790	2.21e-51	162.0	2EUET@1|root,33MX4@2|Bacteria,1VKRJ@1239|Firmicutes,4HS03@91061|Bacilli,1ZIPZ@1386|Bacillus	91061|Bacilli	S	Haemolysin XhlA	xhlA	-	-	-	-	-	-	-	-	-	-	-	XhlA
PHALIAPI_01321	224308.BSU12800	1.64e-52	165.0	2DRCI@1|root,33B7V@2|Bacteria,1VKC1@1239|Firmicutes,4HP5W@91061|Bacilli,1ZKKG@1386|Bacillus	91061|Bacilli	S	SPP1 phage holin	xhlB	-	-	-	-	-	-	-	-	-	-	-	Holin_SPP1
PHALIAPI_01322	224308.BSU12810	9.16e-209	577.0	COG3409@1|root,COG5632@1|root,COG3409@2|Bacteria,COG5632@2|Bacteria,1V7KT@1239|Firmicutes,4HJ9N@91061|Bacilli,1ZB8D@1386|Bacillus	91061|Bacilli	M	n-acetylmuramoyl-L-alanine amidase	xlyA	-	3.5.1.28	ko:K01447	-	-	R04112	RC00064,RC00141	ko00000,ko01000	-	-	-	Amidase_2,LysM,PG_binding_1,SLH
PHALIAPI_01324	224308.BSU12820	1.78e-31	110.0	29S32@1|root,30D7K@2|Bacteria,1UAYF@1239|Firmicutes,4IMBF@91061|Bacilli,1ZJQE@1386|Bacillus	91061|Bacilli	S	Stage II sporulation protein SB	spoIISB	-	-	ko:K06389	-	-	-	-	ko00000	-	-	-	SpoIISB_antitox
PHALIAPI_01325	224308.BSU12830	1.19e-175	489.0	2CDMR@1|root,33VU0@2|Bacteria,1U2MF@1239|Firmicutes,4HW8B@91061|Bacilli,1ZE5J@1386|Bacillus	91061|Bacilli	S	Toxin SpoIISA, type II toxin-antitoxin system	spoIISA	-	-	ko:K06388	-	-	-	-	ko00000	-	-	-	SpoIISA_toxin
PHALIAPI_01326	224308.BSU12840	1.54e-225	623.0	COG0306@1|root,COG0306@2|Bacteria,1TQ3D@1239|Firmicutes,4HAPD@91061|Bacilli,1ZBFE@1386|Bacillus	91061|Bacilli	P	phosphate transporter	pit	GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
PHALIAPI_01327	224308.BSU12850	1.85e-144	407.0	COG1392@1|root,COG1392@2|Bacteria,1V3AP@1239|Firmicutes,4IRDI@91061|Bacilli,1ZRTM@1386|Bacillus	91061|Bacilli	P	COG1392 Phosphate transport regulator (distant homolog of PhoU)	ykaA	-	-	ko:K07220	-	-	-	-	ko00000	-	-	-	PhoU_div
PHALIAPI_01328	224308.BSU12860	3.13e-310	846.0	COG0531@1|root,COG0531@2|Bacteria,1TQ48@1239|Firmicutes,4HBGT@91061|Bacilli,1ZCVT@1386|Bacillus	91061|Bacilli	E	amino acid	steT	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
PHALIAPI_01329	224308.BSU12870	2.31e-232	639.0	COG0346@1|root,COG0346@2|Bacteria,1TP7I@1239|Firmicutes,4H9ND@91061|Bacilli,1ZBUA@1386|Bacillus	91061|Bacilli	E	COG0346 Lactoylglutathione lyase and related lyases	ykcA	-	-	ko:K15975	-	-	-	-	ko00000	-	-	-	Glyoxalase
PHALIAPI_01330	224308.BSU12880	0.0	1206.0	COG1807@1|root,COG1807@2|Bacteria,1TPGI@1239|Firmicutes,4HCEY@91061|Bacilli,1ZCFV@1386|Bacillus	91061|Bacilli	M	COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	ykcB	-	-	-	-	-	-	-	-	-	-	-	PMT_2
PHALIAPI_01331	224308.BSU12890	7.41e-228	628.0	COG0463@1|root,COG0463@2|Bacteria,1TPR3@1239|Firmicutes,4HC2Z@91061|Bacilli,1ZD2D@1386|Bacillus	91061|Bacilli	M	COG0463 Glycosyltransferases involved in cell wall biogenesis	ykcC	-	-	ko:K20534	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.2.1.9	GT2	-	Glycos_transf_2
PHALIAPI_01333	224308.BSU12900	8.84e-278	764.0	COG0265@1|root,COG0265@2|Bacteria,1TRM8@1239|Firmicutes,4HA31@91061|Bacilli,1ZB6P@1386|Bacillus	91061|Bacilli	O	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain	htrA	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
PHALIAPI_01334	224308.BSU12910	1.93e-177	496.0	COG0345@1|root,COG0345@2|Bacteria,1UZ3D@1239|Firmicutes,4HCJ6@91061|Bacilli,1ZCP4@1386|Bacillus	91061|Bacilli	E	Pyrroline-5-carboxylate reductase	proG	-	1.5.1.2	ko:K00286,ko:K02239	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015,M00429	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000,ko02044	-	-	-	F420_oxidored,P5CR_dimer
PHALIAPI_01335	224308.BSU12920	1.4e-196	545.0	COG2362@1|root,COG2362@2|Bacteria,1TSUZ@1239|Firmicutes,4HC5R@91061|Bacilli,1ZC41@1386|Bacillus	91061|Bacilli	E	D-aminopeptidase	dppA	-	-	ko:K16203	-	-	-	-	ko00000,ko01000,ko01002	3.A.1.5.2	-	iYO844.BSU12920	Peptidase_M55
PHALIAPI_01336	224308.BSU12930	9.7e-204	565.0	COG0601@1|root,COG0601@2|Bacteria,1TP1S@1239|Firmicutes,4HA2S@91061|Bacilli,1ZAUS@1386|Bacillus	91061|Bacilli	P	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components	dppB	GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0022857,GO:0051179,GO:0051234,GO:0055085	-	ko:K16200	ko02010,map02010	M00566	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.2	-	iYO844.BSU12930	BPD_transp_1
PHALIAPI_01337	224308.BSU12940	3.02e-224	619.0	COG1173@1|root,COG1173@2|Bacteria,1TP4R@1239|Firmicutes,4H9PZ@91061|Bacilli,1ZC9B@1386|Bacillus	91061|Bacilli	EP	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components	dppC	-	-	ko:K15582,ko:K16201	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00439,M00566	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.2,3.A.1.5.25	-	-	BPD_transp_1,OppC_N
PHALIAPI_01338	224308.BSU12950	1.83e-234	645.0	COG0444@1|root,COG0444@2|Bacteria,1TP6E@1239|Firmicutes,4HA4E@91061|Bacilli,1ZB72@1386|Bacillus	91061|Bacilli	P	Belongs to the ABC transporter superfamily	dppD	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439,M00566	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.2,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
PHALIAPI_01339	224308.BSU12960	0.0	1101.0	COG4166@1|root,COG4166@2|Bacteria,1TNYQ@1239|Firmicutes,4HAMK@91061|Bacilli,1ZBB4@1386|Bacillus	91061|Bacilli	E	ABC transporter substrate-binding protein	dppE	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K16199	ko02010,map02010	M00566	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.2	-	-	SBP_bac_5
PHALIAPI_01341	224308.BSU12970	7.89e-224	617.0	COG1619@1|root,COG1619@2|Bacteria,1TRBB@1239|Firmicutes,4HAWT@91061|Bacilli,1ZC09@1386|Bacillus	91061|Bacilli	V	proteins, homologs of microcin C7 resistance protein MccF	ykfA	-	3.4.17.13	ko:K01297	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_S66
PHALIAPI_01342	224308.BSU12980	2.68e-254	698.0	COG4948@1|root,COG4948@2|Bacteria,1TQMS@1239|Firmicutes,4HCY5@91061|Bacilli,1ZC5Y@1386|Bacillus	91061|Bacilli	M	Belongs to the mandelate racemase muconate lactonizing enzyme family	ykfB	-	5.1.1.20	ko:K19802	-	-	R10938	RC03309	ko00000,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
PHALIAPI_01343	224308.BSU12990	2e-207	574.0	COG0791@1|root,COG0791@2|Bacteria,1TSZ0@1239|Firmicutes,4HBUM@91061|Bacilli,1ZD7T@1386|Bacillus	91061|Bacilli	M	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	ykfC	-	3.4.14.13	ko:K20742	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	NLPC_P60
PHALIAPI_01344	224308.BSU13000	1.03e-237	653.0	COG4608@1|root,COG4608@2|Bacteria,1V36J@1239|Firmicutes,4H9YB@91061|Bacilli,1ZBA4@1386|Bacillus	91061|Bacilli	E	Belongs to the ABC transporter superfamily	ykfD	-	-	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
PHALIAPI_01345	224308.BSU13010	6.64e-260	711.0	COG2706@1|root,COG2706@2|Bacteria,1TQ3J@1239|Firmicutes,4HBHB@91061|Bacilli,1ZANH@1386|Bacillus	91061|Bacilli	G	6-phosphogluconolactonase	pgl	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0016788,GO:0017057,GO:0044424,GO:0044444,GO:0044464,GO:0052689	3.1.1.31	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Lactonase
PHALIAPI_01346	224308.BSU13020	1.4e-202	561.0	COG1834@1|root,COG1834@2|Bacteria,1VDT8@1239|Firmicutes,4ISAW@91061|Bacilli,1ZCTN@1386|Bacillus	91061|Bacilli	E	Amidinotransferase	ykgA	-	-	-	-	-	-	-	-	-	-	-	Amidinotransf
PHALIAPI_01347	224308.BSU13030	1.55e-119	342.0	COG1607@1|root,COG1607@2|Bacteria,1V3S2@1239|Firmicutes,4HJ0Z@91061|Bacilli,1ZGQ9@1386|Bacillus	91061|Bacilli	I	Acyl-CoA hydrolase	ykhA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0047617,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564	-	-	-	-	-	-	-	-	-	-	4HBT
PHALIAPI_01348	224308.BSU13040	2.84e-284	777.0	COG1017@1|root,COG1018@1|root,COG1017@2|Bacteria,COG1018@2|Bacteria,1TRG2@1239|Firmicutes,4HAU3@91061|Bacilli,1ZAP9@1386|Bacillus	91061|Bacilli	C	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress	hmp	GO:0000041,GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004155,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008941,GO:0009056,GO:0009987,GO:0015669,GO:0015671,GO:0015893,GO:0016491,GO:0016645,GO:0016646,GO:0016705,GO:0016708,GO:0017144,GO:0019825,GO:0030001,GO:0033554,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042493,GO:0042737,GO:0043167,GO:0043168,GO:0044237,GO:0044248,GO:0044270,GO:0044464,GO:0046209,GO:0046210,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051213,GO:0051234,GO:0051409,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0071500,GO:0071949,GO:0072593,GO:0097159,GO:1901265,GO:1901363,GO:2001057	1.14.12.17,1.18.1.3	ko:K05916,ko:K15765	ko00623,ko00920,ko01100,ko01120,ko01220,ko05132,map00623,map00920,map01100,map01120,map01220,map05132	M00538	R02550,R03562,R05666,R09513	RC00269,RC00490,RC02556	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_6,Globin,NAD_binding_1
PHALIAPI_01349	279010.BL05199	3.55e-14	67.8	290T0@1|root,2ZNF3@2|Bacteria,1W534@1239|Firmicutes,4I1ZV@91061|Bacilli,1ZPGP@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01350	224308.BSU13060	2.67e-165	463.0	COG2323@1|root,COG2323@2|Bacteria,1V95K@1239|Firmicutes,4HIRN@91061|Bacilli,1ZQ05@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF421)	ykjA	-	-	-	-	-	-	-	-	-	-	-	DUF421
PHALIAPI_01351	224308.BSU13070	3.57e-125	356.0	COG2318@1|root,COG2318@2|Bacteria,1VXC8@1239|Firmicutes,4HWVP@91061|Bacilli,1ZH7I@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF664)	ykkA	-	-	-	-	-	-	-	-	-	-	-	DUF664,DinB_2
PHALIAPI_01352	224308.BSU13080	2e-125	356.0	COG1670@1|root,COG1670@2|Bacteria,1V4IY@1239|Firmicutes,4HG60@91061|Bacilli,1ZFNH@1386|Bacillus	91061|Bacilli	J	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins	ykkB	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
PHALIAPI_01353	224308.BSU13090	7.34e-72	216.0	COG2076@1|root,COG2076@2|Bacteria,1VA2G@1239|Firmicutes,4HKGV@91061|Bacilli,1ZHW4@1386|Bacillus	91061|Bacilli	P	Multidrug resistance protein	ykkC	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046618,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K18924	-	M00712	-	-	ko00000,ko00002,ko02000	2.A.7.1.5	-	-	Multi_Drug_Res
PHALIAPI_01354	224308.BSU13100	1.94e-66	202.0	COG2076@1|root,COG2076@2|Bacteria,1VAQQ@1239|Firmicutes,4HKMP@91061|Bacilli,1ZHZ0@1386|Bacillus	91061|Bacilli	P	Multidrug resistance protein	ykkD	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046618,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K18925	-	M00712	-	-	ko00000,ko00002,ko02000	2.A.7.1.5	-	-	Multi_Drug_Res
PHALIAPI_01355	224308.BSU13110	1.94e-216	597.0	COG0788@1|root,COG0788@2|Bacteria,1TSN4@1239|Firmicutes,4HAW2@91061|Bacilli,1ZAYE@1386|Bacillus	91061|Bacilli	F	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)	purU	-	3.5.1.10	ko:K01433	ko00630,ko00670,map00630,map00670	-	R00944	RC00026,RC00111	ko00000,ko00001,ko01000	-	-	-	ACT,Formyl_trans_N
PHALIAPI_01356	224308.BSU13120	3.68e-256	703.0	COG0263@1|root,COG0263@2|Bacteria,1TPG6@1239|Firmicutes,4HA9B@91061|Bacilli,1ZAPU@1386|Bacillus	91061|Bacilli	E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate	proB	GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.11	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	M00015	R00239	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,PUA
PHALIAPI_01357	224308.BSU13130	2.18e-287	786.0	COG0014@1|root,COG0014@2|Bacteria,1TQ9V@1239|Firmicutes,4HB7B@91061|Bacilli,1ZC00@1386|Bacillus	91061|Bacilli	E	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate	proA	GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114	1.2.1.41	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	M00015	R03313	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU13130	Aldedh
PHALIAPI_01358	224308.BSU13140	2.39e-93	273.0	COG1764@1|root,COG1764@2|Bacteria,1V54N@1239|Firmicutes,4HJCS@91061|Bacilli,1ZHD3@1386|Bacillus	91061|Bacilli	O	Organic hydroperoxide resistance protein	ohrA	-	-	-	-	-	-	-	-	-	-	-	OsmC
PHALIAPI_01359	224308.BSU13150	1.42e-97	284.0	COG1846@1|root,COG1846@2|Bacteria,1V6G0@1239|Firmicutes,4HKQR@91061|Bacilli,1ZHB6@1386|Bacillus	91061|Bacilli	K	COG1846 Transcriptional regulators	ohrR	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_01360	224308.BSU13160	2.34e-93	272.0	COG1764@1|root,COG1764@2|Bacteria,1V54N@1239|Firmicutes,4HJCS@91061|Bacilli,1ZHD3@1386|Bacillus	91061|Bacilli	O	Organic hydroperoxide resistance protein	ohrB	-	-	-	-	-	-	-	-	-	-	-	OsmC
PHALIAPI_01361	224308.BSU13170	5.46e-113	323.0	COG0590@1|root,COG0590@2|Bacteria,1V7G0@1239|Firmicutes,4HJIH@91061|Bacilli,1ZEIN@1386|Bacillus	91061|Bacilli	FJ	COG0590 Cytosine adenosine deaminases	guaD	GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	3.5.4.3	ko:K01487	ko00230,ko01100,map00230,map01100	-	R01676	RC00204	ko00000,ko00001,ko01000	-	-	-	MafB19-deam,dCMP_cyt_deam_1
PHALIAPI_01362	1051501.AYTL01000027_gene901	1.86e-125	359.0	COG0406@1|root,COG0406@2|Bacteria,1V6ES@1239|Firmicutes,4HGZI@91061|Bacilli,1ZHNV@1386|Bacillus	91061|Bacilli	G	Belongs to the phosphoglycerate mutase family	-	-	-	-	-	-	-	-	-	-	-	-	His_Phos_1
PHALIAPI_01363	224308.BSU13180	0.0	1513.0	COG0620@1|root,COG0620@2|Bacteria,1TP2H@1239|Firmicutes,4H9QC@91061|Bacilli,1ZBI7@1386|Bacillus	91061|Bacilli	E	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation	metE	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0042085,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050667,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_1,Meth_synt_2
PHALIAPI_01364	224308.BSU13190	1.49e-225	622.0	COG1404@1|root,COG1404@2|Bacteria,1TPZ5@1239|Firmicutes,4HA5F@91061|Bacilli,1ZPUP@1386|Bacillus	91061|Bacilli	O	Belongs to the peptidase S8 family	isp	-	-	ko:K13275	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	Peptidase_S8
PHALIAPI_01365	224308.BSU13200	3.99e-193	536.0	COG1366@1|root,COG1366@2|Bacteria,1V1QF@1239|Firmicutes,4HGBT@91061|Bacilli,1ZDJX@1386|Bacillus	91061|Bacilli	T	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)	-	-	-	ko:K17763	-	-	-	-	ko00000,ko03021	-	-	-	STAS
PHALIAPI_01366	224308.BSU13210	1.81e-173	484.0	COG0619@1|root,COG0619@2|Bacteria,1TUDZ@1239|Firmicutes,4HCPC@91061|Bacilli,1ZEHA@1386|Bacillus	91061|Bacilli	P	Cobalt transport protein	ykoC	-	-	ko:K16785	ko02010,map02010	M00582	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35	-	-	CbiQ
PHALIAPI_01367	224308.BSU13220	0.0	1052.0	COG1122@1|root,COG1122@2|Bacteria,1TPH8@1239|Firmicutes,4HAJM@91061|Bacilli,1ZD95@1386|Bacillus	91061|Bacilli	P	ABC transporter, ATP-binding protein	ykoD	GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085	-	ko:K16786,ko:K16787	ko02010,map02010	M00582	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35	-	-	ABC_tran,DUF3744
PHALIAPI_01368	224308.BSU13230	5.67e-127	362.0	COG4721@1|root,COG4721@2|Bacteria,1V39N@1239|Firmicutes,4HF32@91061|Bacilli,1ZEPF@1386|Bacillus	91061|Bacilli	S	ABC-type cobalt transport system, permease component	ykoE	-	-	ko:K16925	-	M00582	-	-	ko00000,ko00002,ko02000	3.A.1.30	-	-	ABC_cobalt
PHALIAPI_01369	224308.BSU13240	2.44e-142	401.0	28NV2@1|root,2ZBT9@2|Bacteria,1TQQC@1239|Firmicutes,4HCCT@91061|Bacilli,1ZFNS@1386|Bacillus	91061|Bacilli	S	YKOF-related Family	ykoF	-	-	-	-	-	-	-	-	-	-	-	Ykof
PHALIAPI_01370	224308.BSU13250	1.23e-158	445.0	COG0745@1|root,COG0745@2|Bacteria,1TS81@1239|Firmicutes,4H9NE@91061|Bacilli,1ZD1X@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	ykoG	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_01371	224308.BSU13260	3.65e-308	842.0	COG3850@1|root,COG5002@1|root,COG3850@2|Bacteria,COG5002@2|Bacteria,1TPSK@1239|Firmicutes,4HAH5@91061|Bacilli,1ZB8J@1386|Bacillus	91061|Bacilli	T	Histidine kinase	ykoH	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
PHALIAPI_01372	224308.BSU13270	1.12e-144	409.0	COG3212@1|root,COG3212@2|Bacteria,1VHVW@1239|Firmicutes,4HP4W@91061|Bacilli,1ZDTW@1386|Bacillus	91061|Bacilli	S	Peptidase propeptide and YPEB domain	ykoI	-	-	-	-	-	-	-	-	-	-	-	PepSY
PHALIAPI_01373	224308.BSU13280	2.24e-112	323.0	COG3212@1|root,COG3212@2|Bacteria,1VEU1@1239|Firmicutes,4HPJK@91061|Bacilli,1ZJ8Z@1386|Bacillus	91061|Bacilli	S	Peptidase propeptide and YPEB domain	ykoJ	-	-	-	-	-	-	-	-	-	-	-	PepSY
PHALIAPI_01374	1178537.BA1_12699	1.45e-08	51.6	29TAK@1|root,30EHN@2|Bacteria,1UCJT@1239|Firmicutes,4IP1Y@91061|Bacilli,1ZP9H@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01376	224308.BSU13300	9.44e-298	815.0	COG2239@1|root,COG2239@2|Bacteria,1TP4V@1239|Firmicutes,4HASP@91061|Bacilli,1ZCSG@1386|Bacillus	91061|Bacilli	P	Acts as a magnesium transporter	mgtE	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	iYO844.BSU13300	CBS,MgtE,MgtE_N
PHALIAPI_01377	224308.BSU13310	1.49e-70	213.0	COG0789@1|root,COG0789@2|Bacteria,1VABB@1239|Firmicutes,4HMSS@91061|Bacilli,1ZHYS@1386|Bacillus	91061|Bacilli	K	transcriptional	tnrA	GO:0001047,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0042221,GO:0043562,GO:0044212,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071944,GO:0080090,GO:0090293,GO:0090294,GO:0097159,GO:1901363,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MerR_1
PHALIAPI_01378	224308.BSU13320	1.63e-25	94.7	29S82@1|root,30DCJ@2|Bacteria,1UB54@1239|Firmicutes,4IMHP@91061|Bacilli,1ZK6F@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01379	224308.BSU13330	3.04e-36	122.0	29SC8@1|root,30DGU@2|Bacteria,1UB9W@1239|Firmicutes,4IMNN@91061|Bacilli,1ZKHJ@1386|Bacillus	91061|Bacilli	-	-	ykoL	-	-	-	-	-	-	-	-	-	-	-	Fur_reg_FbpA
PHALIAPI_01380	224308.BSU13340	9.83e-106	305.0	COG1846@1|root,COG1846@2|Bacteria,1V7Z7@1239|Firmicutes,4HJ25@91061|Bacilli,1ZCI8@1386|Bacillus	91061|Bacilli	K	transcriptional	ykoM	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	ko:K15973	-	-	-	-	ko00000,ko03000	-	-	-	MarR
PHALIAPI_01381	224308.BSU13350	9.52e-272	743.0	COG0707@1|root,COG0707@2|Bacteria,1UQ6A@1239|Firmicutes,4HDYW@91061|Bacilli,1ZC45@1386|Bacillus	91061|Bacilli	M	COG0707 UDP-N-acetylglucosamine LPS N-acetylglucosamine transferase	ugtP	-	2.4.1.315	ko:K03429	ko00561,ko01100,map00561,map01100	-	R02689,R04377	RC00005,RC00059	ko00000,ko00001,ko01000,ko01003	-	GT28	-	Glyco_tran_28_C,MGDG_synth
PHALIAPI_01382	224308.BSU13360	3.96e-126	359.0	COG0726@1|root,COG0726@2|Bacteria,1V6E9@1239|Firmicutes,4HIR9@91061|Bacilli,1ZHR8@1386|Bacillus	91061|Bacilli	G	polysaccharide deacetylase	ykoP	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01383	224308.BSU13370	2.07e-196	544.0	COG1408@1|root,COG1408@2|Bacteria,1TUM2@1239|Firmicutes,4HAX1@91061|Bacilli,1ZDBZ@1386|Bacillus	91061|Bacilli	S	Calcineurin-like phosphoesterase superfamily domain	ykoQ	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos,Metallophos_2
PHALIAPI_01384	224308.BSU13380	0.0	1132.0	28H8D@1|root,2Z7KA@2|Bacteria,1UB21@1239|Firmicutes,4HA47@91061|Bacilli,1ZB3G@1386|Bacillus	91061|Bacilli	-	-	ykoS	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01385	224308.BSU13390	4.51e-236	650.0	COG0463@1|root,COG0463@2|Bacteria,1TPR3@1239|Firmicutes,4HC2Z@91061|Bacilli,1ZD2D@1386|Bacillus	91061|Bacilli	M	COG0463 Glycosyltransferases involved in cell wall biogenesis	ykoT	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
PHALIAPI_01386	224308.BSU13400	0.0	1246.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,1TSAC@1239|Firmicutes,4HAJG@91061|Bacilli,1ZB2G@1386|Bacillus	91061|Bacilli	L	ATP-dependent DNA ligase	ligD	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_M
PHALIAPI_01387	224308.BSU13410	1.46e-203	565.0	COG1273@1|root,COG1273@2|Bacteria,1TSY5@1239|Firmicutes,4HC5V@91061|Bacilli,1ZB9J@1386|Bacillus	91061|Bacilli	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
PHALIAPI_01388	224308.BSU13420	0.0	1532.0	COG3300@1|root,COG5001@1|root,COG3300@2|Bacteria,COG5001@2|Bacteria,1TP8V@1239|Firmicutes,4HA3G@91061|Bacilli,1ZAVY@1386|Bacillus	91061|Bacilli	T	Diguanylate cyclase	ykoW	-	2.7.7.65	ko:K21023	ko02025,map02025	-	-	-	ko00000,ko00001,ko01000	-	-	-	EAL,GGDEF,MHYT
PHALIAPI_01389	224308.BSU13430	3.44e-143	405.0	COG0586@1|root,COG0586@2|Bacteria,1V1D4@1239|Firmicutes,4HFSU@91061|Bacilli,1ZCPB@1386|Bacillus	91061|Bacilli	S	membrane-associated protein	ykoX	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
PHALIAPI_01390	224308.BSU13440	7.67e-226	623.0	COG0861@1|root,COG0861@2|Bacteria,1TQ09@1239|Firmicutes,4HB99@91061|Bacilli,1ZBPQ@1386|Bacillus	91061|Bacilli	P	COG0861 Membrane protein TerC, possibly involved in tellurium resistance	ykoY	-	-	-	-	-	-	-	-	-	-	-	TerC
PHALIAPI_01391	224308.BSU13450	1.8e-167	469.0	COG1191@1|root,COG1191@2|Bacteria,1V5E6@1239|Firmicutes,4HEBS@91061|Bacilli,1ZCY4@1386|Bacillus	91061|Bacilli	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	sigI	-	-	ko:K03093	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2
PHALIAPI_01392	224308.BSU13460	6.63e-191	539.0	2E3R1@1|root,32YNU@2|Bacteria,1VEND@1239|Firmicutes,4HNII@91061|Bacilli,1ZFAW@1386|Bacillus	91061|Bacilli	S	Anti-sigma factor N-terminus	rsgI	-	-	-	-	-	-	-	-	-	-	-	RsgI_N
PHALIAPI_01393	224308.BSU13470	1.4e-36	123.0	2BX75@1|root,32YR8@2|Bacteria,1VJMT@1239|Firmicutes,4HP70@91061|Bacilli,1ZIU2@1386|Bacillus	91061|Bacilli	S	small acid-soluble spore protein	sspD	-	-	ko:K06421	-	-	-	-	ko00000	-	-	-	SASP
PHALIAPI_01394	224308.BSU13480	7.37e-158	443.0	28PJY@1|root,2ZC9F@2|Bacteria,1V390@1239|Firmicutes,4HG7F@91061|Bacilli,1ZDN7@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF1836)	ykrK	-	-	-	-	-	-	-	-	-	-	-	DUF1836
PHALIAPI_01395	224308.BSU13490	3.97e-199	553.0	COG0501@1|root,COG0501@2|Bacteria,1TP23@1239|Firmicutes,4HB11@91061|Bacilli,1ZBW6@1386|Bacillus	91061|Bacilli	O	Belongs to the peptidase M48B family	htpX	-	-	ko:K03799	-	M00743	-	-	ko00000,ko00002,ko01000,ko01002	-	-	-	Peptidase_M48
PHALIAPI_01396	224308.BSU13500	2.58e-310	847.0	COG0168@1|root,COG0168@2|Bacteria,1TQ4S@1239|Firmicutes,4H9ME@91061|Bacilli,1ZD2H@1386|Bacillus	91061|Bacilli	P	COG0168 Trk-type K transport systems, membrane components	ktrD	-	-	-	-	-	-	-	-	-	-	-	TrkH
PHALIAPI_01398	224308.BSU13510	8.33e-31	108.0	29S13@1|root,30D5G@2|Bacteria,1UAVK@1239|Firmicutes,4IM8F@91061|Bacilli,1ZJGH@1386|Bacillus	91061|Bacilli	-	-	ykzE	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01399	224308.BSU13520	1.93e-243	669.0	COG3594@1|root,COG3594@2|Bacteria,1TPGY@1239|Firmicutes,4HCER@91061|Bacilli,1ZDAV@1386|Bacillus	91061|Bacilli	G	COG3594 Fucose 4-O-acetylase and related acetyltransferases	ykrP	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
PHALIAPI_01400	224308.BSU13530	0.0	1432.0	COG5002@1|root,COG5002@2|Bacteria,1VUBP@1239|Firmicutes,4HUPW@91061|Bacilli,1ZS15@1386|Bacillus	91061|Bacilli	T	Histidine kinase	kinE	-	2.7.13.3	ko:K13533	ko02020,map02020	M00485	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_4,PAS_8,PAS_9
PHALIAPI_01401	224308.BSU13540	3.77e-113	325.0	COG0350@1|root,COG0350@2|Bacteria,1VA03@1239|Firmicutes,4HKC0@91061|Bacilli,1ZGW4@1386|Bacillus	91061|Bacilli	L	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated	ogt	GO:0003674,GO:0003824,GO:0003908,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360	2.1.1.63	ko:K00567,ko:K13531	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1,Methyltransf_1N
PHALIAPI_01403	224308.BSU13550	1.09e-251	691.0	COG0182@1|root,COG0182@2|Bacteria,1TPDK@1239|Firmicutes,4H9WM@91061|Bacilli,1ZCD9@1386|Bacillus	91061|Bacilli	E	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)	mtnA	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.3.1.23	ko:K08963	ko00270,ko01100,map00270,map01100	M00034	R04420	RC01151	ko00000,ko00001,ko00002,ko01000	-	-	-	IF-2B
PHALIAPI_01404	224308.BSU13560	1.49e-292	798.0	COG4857@1|root,COG4857@2|Bacteria,1TPHY@1239|Firmicutes,4H9QU@91061|Bacilli,1ZBZS@1386|Bacillus	91061|Bacilli	F	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate	mtnK	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.1.100	ko:K00899	ko00270,ko01100,map00270,map01100	M00034	R04143	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	APH
PHALIAPI_01405	224308.BSU13570	1.99e-193	535.0	COG0388@1|root,COG0388@2|Bacteria,1TQDK@1239|Firmicutes,4HC44@91061|Bacilli,1ZB5Z@1386|Bacillus	91061|Bacilli	S	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	mtnU	-	3.5.1.3	ko:K13566	ko00250,map00250	-	R00269,R00348	RC00010	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
PHALIAPI_01406	224308.BSU13580	2.67e-293	800.0	COG0436@1|root,COG0436@2|Bacteria,1TQD6@1239|Firmicutes,4HAHQ@91061|Bacilli,1ZBB2@1386|Bacillus	91061|Bacilli	E	Aminotransferase	mtnE	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009987,GO:0016740,GO:0016769,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249	-	ko:K08969,ko:K19549	ko00270,ko01100,ko01130,map00270,map01100,map01130	M00034,M00787	R07396,R11068	RC00006	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
PHALIAPI_01407	224308.BSU13590	9.72e-295	804.0	COG1850@1|root,COG1850@2|Bacteria,1TSZQ@1239|Firmicutes,4HBIK@91061|Bacilli,1ZC2J@1386|Bacillus	91061|Bacilli	G	Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)	mtnW	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009853,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016984,GO:0043094,GO:0044237	5.3.2.5	ko:K08965	ko00270,ko01100,map00270,map01100	M00034	R07393	RC02421	ko00000,ko00001,ko00002,ko01000	-	-	-	RuBisCO_large,RuBisCO_large_N
PHALIAPI_01408	224308.BSU13600	7.2e-175	486.0	COG4359@1|root,COG4359@2|Bacteria,1TSZ9@1239|Firmicutes,4H9ZE@91061|Bacilli,1ZBXD@1386|Bacillus	91061|Bacilli	E	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)	mtnX	-	3.1.3.87	ko:K08966	ko00270,ko01100,map00270,map01100	M00034	R07394	RC02074	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU13600	HAD
PHALIAPI_01409	224308.BSU13610	5.28e-146	411.0	COG0235@1|root,COG0235@2|Bacteria,1V516@1239|Firmicutes,4IQSM@91061|Bacilli,1ZRN8@1386|Bacillus	91061|Bacilli	E	Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)	mtnB	-	4.2.1.109	ko:K08964	ko00270,ko01100,map00270,map01100	M00034	R07392	RC01939	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase_II
PHALIAPI_01410	224308.BSU13620	3.54e-122	348.0	COG1791@1|root,COG1791@2|Bacteria,1TT4W@1239|Firmicutes,4HFN3@91061|Bacilli,1ZFZ5@1386|Bacillus	91061|Bacilli	S	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway	mtnD	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0010309,GO:0016053,GO:0016491,GO:0016701,GO:0016702,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0051213,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.13.11.53,1.13.11.54	ko:K08967	ko00270,ko01100,map00270,map01100	M00034	R07363,R07364	RC01866,RC02018,RC02118	ko00000,ko00001,ko00002,ko01000	-	-	-	ARD
PHALIAPI_01411	224308.BSU13630	5.11e-67	203.0	COG3339@1|root,COG3339@2|Bacteria,1VPY4@1239|Firmicutes,4IRH9@91061|Bacilli,1ZRUF@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1232)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1232
PHALIAPI_01413	224308.BSU13650	2.67e-91	268.0	2E06E@1|root,32VUE@2|Bacteria,1VCMY@1239|Firmicutes,4HNC3@91061|Bacilli,1ZI1S@1386|Bacillus	91061|Bacilli	-	-	eag	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01414	224308.BSU13660	0.0	946.0	COG3852@1|root,COG3852@2|Bacteria,1TPU8@1239|Firmicutes,4HF96@91061|Bacilli,1ZD24@1386|Bacillus	91061|Bacilli	T	COG0642 Signal transduction histidine kinase	kinD	-	2.7.13.3	ko:K13532	ko02020,map02020	M00485	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,dCache_1
PHALIAPI_01415	224308.BSU13670	7.35e-99	287.0	COG1846@1|root,COG1846@2|Bacteria,1V6EE@1239|Firmicutes,4HJ8T@91061|Bacilli,1ZGC6@1386|Bacillus	91061|Bacilli	K	transcriptional	ykvE	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	ko:K15973	-	-	-	-	ko00000,ko03000	-	-	-	MarR
PHALIAPI_01416	224308.BSU13680	4.91e-170	476.0	COG1360@1|root,COG1360@2|Bacteria,1UXY4@1239|Firmicutes,4HCCI@91061|Bacilli,1ZB4F@1386|Bacillus	91061|Bacilli	N	Flagellar motor protein	motB	-	-	ko:K02557	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	MotB_plug,OmpA
PHALIAPI_01417	224308.BSU13690	1.65e-177	496.0	COG1291@1|root,COG1291@2|Bacteria,1TRH1@1239|Firmicutes,4HAXG@91061|Bacilli,1ZB8I@1386|Bacillus	91061|Bacilli	N	flagellar motor	motA	GO:0001539,GO:0005575,GO:0005623,GO:0005886,GO:0006928,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0040011,GO:0044425,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071944,GO:0071973,GO:0071978,GO:0097588	-	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	MotA_ExbB
PHALIAPI_01418	224308.BSU13700	0.0	1330.0	COG0542@1|root,COG0542@2|Bacteria,1TPMU@1239|Firmicutes,4HA0V@91061|Bacilli,1ZBTK@1386|Bacillus	91061|Bacilli	O	Belongs to the ClpA ClpB family	clpE	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03697,ko:K04086	-	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,UVR
PHALIAPI_01419	224308.BSU13710	7.06e-229	632.0	COG3949@1|root,COG3949@2|Bacteria,1U601@1239|Firmicutes,4HBYW@91061|Bacilli,1ZAX1@1386|Bacillus	91061|Bacilli	S	membrane	ykvI	-	-	-	-	-	-	-	-	-	-	-	Spore_permease
PHALIAPI_01420	224308.BSU13720	4.52e-161	450.0	COG0603@1|root,COG0603@2|Bacteria,1TP4Z@1239|Firmicutes,4HB1Y@91061|Bacilli,1ZCJD@1386|Bacillus	91061|Bacilli	F	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))	queC	-	6.3.4.20	ko:K06920	ko00790,ko01100,map00790,map01100	-	R09978	RC00959	ko00000,ko00001,ko01000,ko03016	-	-	-	QueC
PHALIAPI_01421	224308.BSU13730	6.96e-105	302.0	COG0720@1|root,COG0720@2|Bacteria,1V6X6@1239|Firmicutes,4HJ9P@91061|Bacilli,1ZDDT@1386|Bacillus	91061|Bacilli	H	synthase	queD	-	4.1.2.50,4.2.3.12	ko:K01737	ko00790,ko01100,map00790,map01100	M00842,M00843	R04286,R09959	RC01117,RC02846,RC02847	ko00000,ko00001,ko00002,ko01000,ko03016	-	-	-	PTPS
PHALIAPI_01422	224308.BSU13740	3.56e-179	498.0	COG0602@1|root,COG0602@2|Bacteria,1TQ58@1239|Firmicutes,4HAJ3@91061|Bacilli,1ZBRU@1386|Bacillus	91061|Bacilli	H	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds	queE	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047	4.3.99.3	ko:K10026	ko00790,ko01100,map00790,map01100	-	R10002	RC02989	ko00000,ko00001,ko01000,ko03016	-	-	-	Fer4_12,Fer4_14,Radical_SAM
PHALIAPI_01423	1051501.AYTL01000027_gene960	2.36e-125	355.0	COG0780@1|root,COG0780@2|Bacteria,1TPYC@1239|Firmicutes,4HB14@91061|Bacilli,1ZB8C@1386|Bacillus	91061|Bacilli	S	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)	queF	-	1.7.1.13	ko:K09457	ko00790,ko01100,map00790,map01100	-	R07605	RC01875	ko00000,ko00001,ko01000,ko03016	-	-	-	QueF
PHALIAPI_01424	224308.BSU13780	1.17e-269	739.0	COG1388@1|root,COG4641@1|root,COG1388@2|Bacteria,COG4641@2|Bacteria,1TRY6@1239|Firmicutes,4HJAS@91061|Bacilli,1ZARJ@1386|Bacillus	91061|Bacilli	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_2,LysM
PHALIAPI_01425	224308.BSU13789	8.85e-47	150.0	COG1388@1|root,COG1388@2|Bacteria	2|Bacteria	M	LysM domain	-	-	3.5.1.104	ko:K22278	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_25,LysM,Polysacc_deac_1
PHALIAPI_01426	720555.BATR1942_06725	6.81e-202	561.0	COG3858@1|root,COG3858@2|Bacteria,1TQK2@1239|Firmicutes,4HE0C@91061|Bacilli,1ZPVK@1386|Bacillus	91061|Bacilli	G	Glycosyl hydrolases family 18	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_18,SLH
PHALIAPI_01427	224308.BSU13800	3.12e-61	188.0	2E4N6@1|root,32ZH2@2|Bacteria,1VGMB@1239|Firmicutes,4HPMV@91061|Bacilli,1ZJ10@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3219)	ykvR	-	-	-	-	-	-	-	-	-	-	-	DUF3219
PHALIAPI_01428	224308.BSU13810	5.43e-35	119.0	COG4873@1|root,COG4873@2|Bacteria,1VF7M@1239|Firmicutes,4HPMH@91061|Bacilli,1ZIXH@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ykvS	-	-	-	-	-	-	-	-	-	-	-	DUF2187
PHALIAPI_01429	224308.BSU13819	5.91e-38	127.0	2EI19@1|root,33BSS@2|Bacteria,1VKXC@1239|Firmicutes,4HR2E@91061|Bacilli,1ZIUC@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01430	224308.BSU13820	1.92e-111	322.0	COG3773@1|root,COG3773@2|Bacteria,1TRFW@1239|Firmicutes,4IPK9@91061|Bacilli,1ZRER@1386|Bacillus	91061|Bacilli	M	Cell Wall Hydrolase	ykvT	-	3.5.1.28	ko:K01449	-	-	R04112	RC00064,RC00141	ko00000,ko01000	-	-	-	Hydrolase_2,LysM
PHALIAPI_01431	224308.BSU13830	2.16e-300	822.0	COG2244@1|root,COG2244@2|Bacteria,1VRYZ@1239|Firmicutes,4HV8Z@91061|Bacilli,1ZCGG@1386|Bacillus	91061|Bacilli	S	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid	ykvU	-	-	-	-	-	-	-	-	-	-	-	MatE,Polysacc_synt,Polysacc_synt_C
PHALIAPI_01432	224308.BSU13840	2.36e-116	333.0	COG0526@1|root,COG0526@2|Bacteria,1VAPY@1239|Firmicutes,4HJN1@91061|Bacilli,1ZEK2@1386|Bacillus	91061|Bacilli	CO	thiol-disulfide	stoA	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
PHALIAPI_01433	224308.BSU13850	0.0	1187.0	COG2217@1|root,COG2217@2|Bacteria,1TQ07@1239|Firmicutes,4H9SP@91061|Bacilli,1ZAPS@1386|Bacillus	91061|Bacilli	P	COG2217 Cation transport ATPase	zosA	-	3.6.3.3,3.6.3.5	ko:K01534	-	-	-	-	ko00000,ko01000	3.A.3.6	-	-	E1-E2_ATPase,Hydrolase
PHALIAPI_01434	1051501.AYTL01000027_gene972	3.99e-09	54.7	2BH4M@1|root,32B5K@2|Bacteria,1UB74@1239|Firmicutes,4IMJU@91061|Bacilli,1ZKBC@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01435	224308.BSU13860	1.3e-262	719.0	COG0006@1|root,COG0006@2|Bacteria,1TQ6R@1239|Firmicutes,4HA5I@91061|Bacilli,1ZBZE@1386|Bacillus	91061|Bacilli	E	COG0006 Xaa-Pro aminopeptidase	ykvY	-	3.4.13.9	ko:K01271	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Creatinase_N,Peptidase_M24
PHALIAPI_01437	224308.BSU13870	3.82e-229	631.0	COG1609@1|root,COG1609@2|Bacteria,1TQSQ@1239|Firmicutes,4HBNR@91061|Bacilli,1ZC0J@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ykvZ	-	-	-	-	-	-	-	-	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
PHALIAPI_01439	224308.BSU13880	2.79e-167	471.0	COG3711@1|root,COG3711@2|Bacteria,1TQJJ@1239|Firmicutes,4HBB3@91061|Bacilli,1ZBDU@1386|Bacillus	91061|Bacilli	K	antiterminator	glcT	-	-	ko:K03480,ko:K03488	-	-	-	-	ko00000,ko03000	-	-	-	CAT_RBD,PRD
PHALIAPI_01440	224308.BSU13890	0.0	1342.0	COG1263@1|root,COG1264@1|root,COG2190@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,COG2190@2|Bacteria,1TPJ8@1239|Firmicutes,4HA8X@91061|Bacilli,1ZC48@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	ptsG	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.7.1.199	ko:K02763,ko:K02764,ko:K02765,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	M00282,M00809	R02631,R02738	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.13,4.A.1.1.14,4.A.1.1.6,4.A.1.1.9	-	-	PTS_EIIA_1,PTS_EIIB,PTS_EIIC
PHALIAPI_01441	224308.BSU13900	1.51e-53	168.0	COG1925@1|root,COG1925@2|Bacteria,1VA0R@1239|Firmicutes,4HKGA@91061|Bacilli,1ZHX7@1386|Bacillus	91061|Bacilli	G	phosphocarrier protein HPr	ptsH	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0043610,GO:0044424,GO:0044464,GO:0050789,GO:0065007	-	ko:K11189	-	-	-	-	ko00000,ko02000	4.A.2.1	-	-	PTS-HPr
PHALIAPI_01442	224308.BSU13910	0.0	1091.0	COG1080@1|root,COG1080@2|Bacteria,1TPK8@1239|Firmicutes,4H9VD@91061|Bacilli,1ZAU2@1386|Bacillus	91061|Bacilli	G	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)	ptsI	-	2.7.3.9	ko:K08483	ko02060,map02060	-	-	-	ko00000,ko00001,ko01000,ko02000	8.A.7	-	-	PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C
PHALIAPI_01443	224308.BSU13920	1.54e-51	162.0	2EURH@1|root,33N73@2|Bacteria,1VNQV@1239|Firmicutes,4HRM4@91061|Bacilli,1ZIV4@1386|Bacillus	91061|Bacilli	S	Transcriptional regulator	splA	-	-	ko:K06315	-	-	-	-	ko00000,ko03000	-	-	-	SplA
PHALIAPI_01444	224308.BSU13930	2.13e-257	704.0	COG1533@1|root,COG1533@2|Bacteria,1TPA3@1239|Firmicutes,4HACB@91061|Bacilli,1ZBPU@1386|Bacillus	91061|Bacilli	L	Spore photoproduct lyase	splB	GO:0003674,GO:0003824,GO:0003913,GO:0005488,GO:0005575,GO:0005623,GO:0016829,GO:0016830,GO:0042601,GO:0042763,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070283,GO:0140097	4.1.99.14	ko:K03716	-	-	-	-	ko00000,ko01000	-	-	-	-
PHALIAPI_01445	224308.BSU13940	8.47e-160	448.0	COG0454@1|root,COG0456@2|Bacteria,1U521@1239|Firmicutes,4HBEJ@91061|Bacilli,1ZCHR@1386|Bacillus	91061|Bacilli	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	ykwB	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_01446	224308.BSU13950	0.0	1004.0	COG0840@1|root,COG0840@2|Bacteria,1TP5A@1239|Firmicutes,4H9RZ@91061|Bacilli,1ZBEA@1386|Bacillus	91061|Bacilli	NT	chemotaxis protein	mcpC	GO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0008150,GO:0009605,GO:0016020,GO:0040011,GO:0042221,GO:0042330,GO:0044464,GO:0050896,GO:0050918,GO:0071944	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,dCache_1
PHALIAPI_01447	224308.BSU13960	1.15e-202	561.0	COG2084@1|root,COG2084@2|Bacteria,1TR4F@1239|Firmicutes,4H9MA@91061|Bacilli,1ZBSG@1386|Bacillus	91061|Bacilli	I	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	glxR	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
PHALIAPI_01448	224308.BSU13970	2.18e-171	479.0	COG2340@1|root,COG2340@2|Bacteria,1V6GZ@1239|Firmicutes,4HJ21@91061|Bacilli,1ZDSK@1386|Bacillus	91061|Bacilli	J	protein with SCP PR1 domains	ykwD	-	-	-	-	-	-	-	-	-	-	-	CAP,LysM
PHALIAPI_01449	224308.BSU13980	0.0	1287.0	COG0768@1|root,COG0768@2|Bacteria,1TQHY@1239|Firmicutes,4HAFX@91061|Bacilli,1ZEGD@1386|Bacillus	91061|Bacilli	M	Penicillin-binding Protein	pbp2b	-	-	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011	-	-	-	PBP_dimer,Transpeptidase
PHALIAPI_01450	224308.BSU13990	0.0	1179.0	COG4191@1|root,COG4191@2|Bacteria,1VCNJ@1239|Firmicutes,4HVBX@91061|Bacilli,1ZS41@1386|Bacillus	91061|Bacilli	T	Histidine kinase	kinA	GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0009653,GO:0009987,GO:0030154,GO:0030435,GO:0032502,GO:0042802,GO:0043934,GO:0043937,GO:0043938,GO:0048518,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0051094,GO:0065007	2.7.13.3	ko:K02491	ko02020,map02020	M00485	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,MEDS,PAS,PAS_9
PHALIAPI_01451	224308.BSU14000	1.4e-281	769.0	COG0436@1|root,COG0436@2|Bacteria,1TP0J@1239|Firmicutes,4HA13@91061|Bacilli,1ZAWQ@1386|Bacillus	91061|Bacilli	E	Aminotransferase	patA	-	-	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	M00525	R04467	RC00006	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
PHALIAPI_01452	720555.BATR1942_04770	1.05e-22	87.8	29SAK@1|root,30DF4@2|Bacteria,1UB88@1239|Firmicutes,4IMKY@91061|Bacilli,1ZKDP@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01453	224308.BSU14010	4.95e-216	596.0	COG0784@1|root,COG0835@1|root,COG0784@2|Bacteria,COG0835@2|Bacteria,1TRJU@1239|Firmicutes,4HCPT@91061|Bacilli,1ZAYA@1386|Bacillus	91061|Bacilli	T	Chemotaxis protein CheV	cheV	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0044424,GO:0044444,GO:0044464,GO:0050896	-	ko:K03408,ko:K03415	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	CheW,Response_reg
PHALIAPI_01454	224308.BSU14020	3.71e-110	316.0	2ABH1@1|root,310Y3@2|Bacteria,1V4IK@1239|Firmicutes,4HI56@91061|Bacilli,1ZGD1@1386|Bacillus	91061|Bacilli	S	YkyB-like protein	ykyB	-	-	-	-	-	-	-	-	-	-	-	YkyB
PHALIAPI_01455	224308.BSU14030	2.55e-305	833.0	COG0477@1|root,COG2814@2|Bacteria,1U72T@1239|Firmicutes,4HCHH@91061|Bacilli,1ZCHP@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	ykuC	-	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_01456	224308.BSU14040	2.38e-114	328.0	COG1376@1|root,COG1376@2|Bacteria,1V9XU@1239|Firmicutes,4HKDD@91061|Bacilli,1ZGIN@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ykuD	-	-	-	-	-	-	-	-	-	-	-	LysM,YkuD
PHALIAPI_01457	224308.BSU14050	1.42e-211	583.0	COG1408@1|root,COG1408@2|Bacteria,1UU17@1239|Firmicutes,4HC8Q@91061|Bacilli,1ZB99@1386|Bacillus	91061|Bacilli	S	Metallophosphoesterase	ykuE	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
PHALIAPI_01458	224308.BSU14060	2.6e-182	507.0	COG1028@1|root,COG1028@2|Bacteria,1TPDB@1239|Firmicutes,4HAKR@91061|Bacilli,1ZDEP@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	fadH	-	1.3.1.34	ko:K00219	-	-	-	-	ko00000,ko01000	-	-	-	adh_short_C2
PHALIAPI_01459	224308.BSU14090	2.39e-296	808.0	COG2200@1|root,COG2200@2|Bacteria,1UADD@1239|Firmicutes,4HCNX@91061|Bacilli,1ZBWD@1386|Bacillus	91061|Bacilli	T	Diguanylate phosphodiesterase	ykuI	-	-	-	-	-	-	-	-	-	-	-	EAL,YkuI_C
PHALIAPI_01461	224308.BSU14100	5.16e-50	158.0	COG4703@1|root,COG4703@2|Bacteria,1VKD0@1239|Firmicutes,4HRGC@91061|Bacilli,1ZI15@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ykuJ	-	-	-	-	-	-	-	-	-	-	-	DUF1797
PHALIAPI_01462	224308.BSU14110	2.62e-121	346.0	COG1978@1|root,COG1978@2|Bacteria,1V6RQ@1239|Firmicutes,4HHG1@91061|Bacilli,1ZR7G@1386|Bacillus	91061|Bacilli	S	Ribonuclease H-like	-	-	-	ko:K09776	-	-	-	-	ko00000	-	-	-	RNaseH_like
PHALIAPI_01463	1051501.AYTL01000027_gene1002	7.83e-38	126.0	2DFUR@1|root,2ZT80@2|Bacteria,1VPE1@1239|Firmicutes,4HZWS@91061|Bacilli,1ZIPB@1386|Bacillus	91061|Bacilli	S	Antirepressor AbbA	ykzF	-	-	-	-	-	-	-	-	-	-	-	AbbA_antirepres
PHALIAPI_01464	224308.BSU14130	5.15e-100	290.0	COG0517@1|root,COG0517@2|Bacteria,1V9HN@1239|Firmicutes,4HH3X@91061|Bacilli,1ZGY8@1386|Bacillus	91061|Bacilli	S	CBS domain	ykuL	-	-	-	-	-	-	-	-	-	-	-	CBS
PHALIAPI_01465	224308.BSU14140	6.52e-216	595.0	COG0583@1|root,COG0583@2|Bacteria,1TZ6U@1239|Firmicutes,4HB3Y@91061|Bacilli,1ZB8N@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ccpC	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
PHALIAPI_01466	224308.BSU14150	2.22e-107	310.0	COG0716@1|root,COG0716@2|Bacteria,1V7AG@1239|Firmicutes,4HYY9@91061|Bacilli,1ZQAR@1386|Bacillus	91061|Bacilli	C	Flavodoxin domain	-	-	-	ko:K03839	-	-	-	-	ko00000	-	-	-	Flavodoxin_1
PHALIAPI_01467	224308.BSU14160	2.47e-222	612.0	2AQTM@1|root,31G1Q@2|Bacteria,1U9SX@1239|Firmicutes,4IK02@91061|Bacilli,1ZEXC@1386|Bacillus	91061|Bacilli	-	-	ykuO	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01468	224308.BSU14170	2.95e-101	293.0	COG0716@1|root,COG0716@2|Bacteria,1V7AG@1239|Firmicutes,4HMJF@91061|Bacilli,1ZGS6@1386|Bacillus	91061|Bacilli	C	Flavodoxin	fld	-	-	ko:K03839	-	-	-	-	ko00000	-	-	-	Flavodoxin_1
PHALIAPI_01469	224308.BSU14180	1.31e-125	362.0	COG2171@1|root,COG2171@2|Bacteria,1TQUJ@1239|Firmicutes,4H9KY@91061|Bacilli,1ZBFG@1386|Bacillus	91061|Bacilli	E	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate	dapH	-	2.3.1.117,2.3.1.89	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	M00016,M00525	R04364,R04365	RC00004,RC01136	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU14180	DapH_N,Hexapep
PHALIAPI_01470	224308.BSU14190	5.17e-272	744.0	COG1473@1|root,COG1473@2|Bacteria,1TPD7@1239|Firmicutes,4H9SG@91061|Bacilli,1ZC15@1386|Bacillus	91061|Bacilli	E	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate	hipO	GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0050118,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	3.5.1.47	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	M00525	R02733	RC00064,RC00300	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
PHALIAPI_01471	224308.BSU14200	7.23e-51	160.0	2E5FN@1|root,3307C@2|Bacteria,1VH91@1239|Firmicutes,4HP9B@91061|Bacilli,1ZJ6Z@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0180 family	ykuS	-	-	-	-	-	-	-	-	-	-	-	UPF0180
PHALIAPI_01472	224308.BSU14210	4.78e-180	502.0	COG0668@1|root,COG0668@2|Bacteria,1TR9Z@1239|Firmicutes,4HCB8@91061|Bacilli,1ZCW4@1386|Bacillus	91061|Bacilli	M	Mechanosensitive ion channel	ykuT	GO:0003674,GO:0005215,GO:0006810,GO:0006950,GO:0006970,GO:0008150,GO:0008381,GO:0009628,GO:0009987,GO:0015267,GO:0022803,GO:0022836,GO:0022857,GO:0033554,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071214,GO:0071470,GO:0104004	-	ko:K22044	-	-	-	-	ko00000,ko02000	1.A.23.3	-	-	MS_channel
PHALIAPI_01473	224308.BSU14220	9.78e-130	368.0	COG0450@1|root,COG0450@2|Bacteria,1TQU7@1239|Firmicutes,4HA2M@91061|Bacilli,1ZCZP@1386|Bacillus	91061|Bacilli	O	Alkyl hydroperoxide reductase	ykuU	-	-	-	-	-	-	-	-	-	-	-	1-cysPrx_C,AhpC-TSA
PHALIAPI_01474	224308.BSU14230	4.94e-103	298.0	COG0526@1|root,COG0526@2|Bacteria,1V1R4@1239|Firmicutes,4HFWU@91061|Bacilli,1ZBFR@1386|Bacillus	91061|Bacilli	CO	thiol-disulfide	ykuV	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
PHALIAPI_01475	224308.BSU14240	4.71e-122	349.0	29AGR@1|root,2ZXGY@2|Bacteria,1W2P8@1239|Firmicutes,4HZNQ@91061|Bacilli,1ZEC3@1386|Bacillus	91061|Bacilli	K	Repressor of ComK	rok	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01476	224308.BSU14250	2.71e-197	550.0	29RCT@1|root,30CEZ@2|Bacteria,1U9S5@1239|Firmicutes,4IJYN@91061|Bacilli,1ZEMZ@1386|Bacillus	91061|Bacilli	-	-	yknT	-	-	ko:K06437	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_01477	224308.BSU14260	4.38e-140	395.0	COG0746@1|root,COG0746@2|Bacteria,1VA6T@1239|Firmicutes,4HPX3@91061|Bacilli,1ZIA7@1386|Bacillus	91061|Bacilli	H	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor	mobA	-	2.7.7.77	ko:K03752	ko00790,ko01100,map00790,map01100	-	R11581	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
PHALIAPI_01478	224308.BSU14270	1.26e-243	669.0	COG0476@1|root,COG0476@2|Bacteria,1TQ3U@1239|Firmicutes,4HBGP@91061|Bacilli,1ZBR4@1386|Bacillus	91061|Bacilli	H	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2	moeB	GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779	2.7.7.73,2.7.7.80	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07459	RC00043	ko00000,ko00001,ko01000	-	-	-	ThiF
PHALIAPI_01479	224308.BSU14280	7.12e-312	849.0	COG0303@1|root,COG0303@2|Bacteria,1TQJ8@1239|Firmicutes,4HAFT@91061|Bacilli,1ZB4V@1386|Bacillus	91061|Bacilli	H	molybdopterin	moeA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657	2.10.1.1	ko:K03750	ko00790,ko01100,map00790,map01100	-	R09735	RC03462	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth,MoeA_C,MoeA_N
PHALIAPI_01480	224308.BSU14290	3.44e-122	348.0	COG1763@1|root,COG1763@2|Bacteria,1VFA0@1239|Firmicutes,4HNMQ@91061|Bacilli,1ZH3K@1386|Bacillus	91061|Bacilli	H	molybdopterin-guanine dinucleotide biosynthesis protein	mobB	-	-	ko:K03753	-	-	-	-	ko00000	-	-	-	MobB
PHALIAPI_01481	224308.BSU14300	6.61e-110	316.0	COG0314@1|root,COG0314@2|Bacteria,1V3V0@1239|Firmicutes,4HGZD@91061|Bacilli,1ZG9N@1386|Bacillus	91061|Bacilli	H	COG0314 Molybdopterin converting factor, large subunit	moaE	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657	2.8.1.12	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09395	RC02507	ko00000,ko00001,ko01000	-	-	-	MoaE
PHALIAPI_01482	224308.BSU14310	2.82e-44	144.0	COG1977@1|root,COG1977@2|Bacteria,1VERN@1239|Firmicutes,4HNP5@91061|Bacilli,1ZIV7@1386|Bacillus	91061|Bacilli	H	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin	moaD	-	-	ko:K03636	ko04122,map04122	-	-	-	ko00000,ko00001	-	-	-	ThiS
PHALIAPI_01483	224308.BSU14320	0.0	1118.0	COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4HA3S@91061|Bacilli,1ZASV@1386|Bacillus	91061|Bacilli	V	COG1132 ABC-type multidrug transport system, ATPase and permease components	yknU	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702	-	ko:K06147,ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
PHALIAPI_01484	224308.BSU14330	0.0	1132.0	COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4HA3S@91061|Bacilli,1ZBIW@1386|Bacillus	91061|Bacilli	V	COG1132 ABC-type multidrug transport system, ATPase and permease components	yknV	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702	-	ko:K02021,ko:K06147,ko:K18890	ko02010,map02010	M00707	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.106,3.A.1.106.13,3.A.1.106.5,3.A.1.109,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21	-	-	ABC_membrane,ABC_tran
PHALIAPI_01485	224308.BSU14340	1.31e-150	425.0	2EJ6V@1|root,33CY2@2|Bacteria,1VPDN@1239|Firmicutes,4HS8D@91061|Bacilli,1ZIQW@1386|Bacillus	91061|Bacilli	S	Yip1 domain	yknW	-	-	-	-	-	-	-	-	-	-	-	Yip1
PHALIAPI_01486	224308.BSU14350	3.17e-231	641.0	COG0845@1|root,COG0845@2|Bacteria,1V5DX@1239|Firmicutes,4HMQM@91061|Bacilli,1ZD1D@1386|Bacillus	91061|Bacilli	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	yknX	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K02005,ko:K13888	-	M00709	-	-	ko00000,ko00002,ko02000	8.A.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
PHALIAPI_01487	224308.BSU14360	6.1e-160	448.0	COG1136@1|root,COG1136@2|Bacteria,1TPBJ@1239|Firmicutes,4HBMF@91061|Bacilli,1ZC14@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	yknY	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_01488	224308.BSU14370	1.84e-263	724.0	COG0577@1|root,COG0577@2|Bacteria,1TPUU@1239|Firmicutes,4HATE@91061|Bacilli,1ZDCS@1386|Bacillus	91061|Bacilli	V	COG0577 ABC-type antimicrobial peptide transport system, permease component	yknZ	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
PHALIAPI_01489	224308.BSU14380	7.41e-176	490.0	COG1349@1|root,COG1349@2|Bacteria,1TSF8@1239|Firmicutes,4HDT9@91061|Bacilli,1ZBIR@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	fruR	-	-	ko:K03436	-	-	-	-	ko00000,ko03000	-	-	-	DeoRC,HTH_DeoR
PHALIAPI_01490	224308.BSU14390	1.66e-214	592.0	COG1105@1|root,COG1105@2|Bacteria,1TQ36@1239|Firmicutes,4HANU@91061|Bacilli,1ZB76@1386|Bacillus	91061|Bacilli	G	Belongs to the carbohydrate kinase PfkB family	pfkB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704	2.7.1.56	ko:K00882	ko00051,map00051	-	R02071	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	iYO844.BSU14390	PfkB
PHALIAPI_01491	224308.BSU14400	0.0	1143.0	COG1299@1|root,COG1445@1|root,COG1762@1|root,COG1299@2|Bacteria,COG1445@2|Bacteria,COG1762@2|Bacteria,1TPKU@1239|Firmicutes,4H9KR@91061|Bacilli,1ZAVB@1386|Bacillus	91061|Bacilli	GT	COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)	fruA	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563	2.7.1.202	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	M00273	R03232	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.2.1	-	-	PTS_EIIA_2,PTS_EIIC,PTS_IIB
PHALIAPI_01492	224308.BSU14410	1.72e-134	381.0	COG0681@1|root,COG0681@2|Bacteria,1V2BJ@1239|Firmicutes,4HGCB@91061|Bacilli,1ZGNJ@1386|Bacillus	91061|Bacilli	U	Belongs to the peptidase S26 family	sipT	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
PHALIAPI_01493	224308.BSU14420	5.43e-52	164.0	29RS7@1|root,30CVY@2|Bacteria,1UAG3@1239|Firmicutes,4IKUG@91061|Bacilli,1ZHMP@1386|Bacillus	91061|Bacilli	-	-	ykoA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01494	224308.BSU14430	0.0	1058.0	COG0488@1|root,COG0488@2|Bacteria,1TPW0@1239|Firmicutes,4HATH@91061|Bacilli,1ZBVV@1386|Bacillus	91061|Bacilli	S	COG0488 ATPase components of ABC transporters with duplicated ATPase domains	ykpA	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
PHALIAPI_01495	224308.BSU14440	3.63e-72	224.0	COG1893@1|root,COG1893@2|Bacteria,1TSZ1@1239|Firmicutes,4HB4T@91061|Bacilli,1ZAU6@1386|Bacillus	91061|Bacilli	H	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid	panE1	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	-	ApbA,ApbA_C
PHALIAPI_01496	224308.BSU14440	2.23e-126	364.0	COG1893@1|root,COG1893@2|Bacteria,1TSZ1@1239|Firmicutes,4HB4T@91061|Bacilli,1ZAU6@1386|Bacillus	91061|Bacilli	H	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid	panE1	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	-	ApbA,ApbA_C
PHALIAPI_01497	224308.BSU14450	2.42e-302	823.0	COG2309@1|root,COG2309@2|Bacteria,1TP65@1239|Firmicutes,4H9W8@91061|Bacilli,1ZCU3@1386|Bacillus	91061|Bacilli	E	COG2309 Leucyl aminopeptidase (aminopeptidase T)	pepS	-	-	ko:K19689	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M29
PHALIAPI_01498	720555.BATR1942_04995	1.09e-18	77.0	29SAF@1|root,30DEY@2|Bacteria,1UB7X@1239|Firmicutes,4IMKP@91061|Bacilli,1ZKCX@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein YkpC	-	-	-	-	-	-	-	-	-	-	-	-	ykpC
PHALIAPI_01499	224308.BSU14470	6.17e-234	644.0	COG1077@1|root,COG1077@2|Bacteria,1TP51@1239|Firmicutes,4HC52@91061|Bacilli,1ZCN2@1386|Bacillus	91061|Bacilli	D	Rod-share determining protein MreBH	mreBH	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
PHALIAPI_01500	1051501.AYTL01000027_gene1038	2.63e-58	180.0	COG2002@1|root,COG2002@2|Bacteria,1VA3H@1239|Firmicutes,4HKCH@91061|Bacilli,1ZH5A@1386|Bacillus	91061|Bacilli	K	of stationary sporulation gene expression	abrB	-	-	ko:K06284	-	-	-	-	ko00000,ko03000	-	-	-	MazE_antitoxin
PHALIAPI_01501	224308.BSU14490	3.77e-306	835.0	COG3852@1|root,COG3852@2|Bacteria,1TRH0@1239|Firmicutes,4HD4A@91061|Bacilli,1ZDWU@1386|Bacillus	91061|Bacilli	T	COG0642 Signal transduction histidine kinase	kinC	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.7.13.3	ko:K07698	ko02020,map02020	M00485	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_9
PHALIAPI_01502	224308.BSU14500	1.7e-198	550.0	COG2105@1|root,COG3703@1|root,COG2105@2|Bacteria,COG3703@2|Bacteria,1V4XC@1239|Firmicutes,4HH0F@91061|Bacilli,1ZJQH@1386|Bacillus	91061|Bacilli	P	Gamma-glutamyl cyclotransferase, AIG2-like	ykqA	-	-	-	-	-	-	-	-	-	-	-	AIG2_2,GGACT
PHALIAPI_01503	224308.BSU14510	1.68e-148	419.0	COG0569@1|root,COG0569@2|Bacteria,1TQ9H@1239|Firmicutes,4HBPH@91061|Bacilli,1ZC2N@1386|Bacillus	91061|Bacilli	P	COG0569 K transport systems, NAD-binding component	ktrA	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K03499	-	-	-	-	ko00000,ko02000	2.A.38.1,2.A.38.4	-	-	TrkA_C,TrkA_N
PHALIAPI_01504	224308.BSU14520	0.0	1099.0	COG1001@1|root,COG1001@2|Bacteria,1TP84@1239|Firmicutes,4HBB2@91061|Bacilli,1ZCHI@1386|Bacillus	91061|Bacilli	F	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family	ade	GO:0003674,GO:0003824,GO:0006040,GO:0006044,GO:0006046,GO:0008150,GO:0008152,GO:0008448,GO:0009056,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0046348,GO:0071704,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901575	3.5.4.2	ko:K01486	ko00230,ko01100,map00230,map01100	-	R01244	RC00477	ko00000,ko00001,ko01000	-	-	iYO844.BSU14520	Adenine_deam_C,Amidohydro_1
PHALIAPI_01505	224308.BSU14530	0.0	1108.0	COG0595@1|root,COG0595@2|Bacteria,1TQ9G@1239|Firmicutes,4HAAP@91061|Bacilli,1ZBCD@1386|Bacillus	91061|Bacilli	S	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay	rnjA	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004527,GO:0004532,GO:0004534,GO:0004540,GO:0005488,GO:0005515,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008409,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042802,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140098,GO:1901360	-	ko:K12574	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	Lactamase_B,RMMBL
PHALIAPI_01506	224308.BSU14540	8.98e-42	137.0	COG5503@1|root,COG5503@2|Bacteria,1VEI7@1239|Firmicutes,4HNSK@91061|Bacilli,1ZIUI@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0356 family	ykzG	-	-	-	-	-	-	-	-	-	-	-	DUF1447
PHALIAPI_01507	224308.BSU14550	7.94e-185	514.0	COG0561@1|root,COG0561@2|Bacteria,1TSZZ@1239|Firmicutes,4HB54@91061|Bacilli,1ZBY4@1386|Bacillus	91061|Bacilli	S	hydrolases of the HAD superfamily	ykrA	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_3,S6PP
PHALIAPI_01508	224308.BSU14560	3.96e-131	372.0	COG0242@1|root,COG0242@2|Bacteria,1V70B@1239|Firmicutes,4HH0G@91061|Bacilli,1ZB0K@1386|Bacillus	91061|Bacilli	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
PHALIAPI_01509	224308.BSU14569	2.24e-19	79.3	2DRND@1|root,33CCV@2|Bacteria,1VNPA@1239|Firmicutes	1239|Firmicutes	S	Protein of unknown function (Tiny_TM_bacill)	-	-	-	-	-	-	-	-	-	-	-	-	Tiny_TM_bacill
PHALIAPI_01510	224308.BSU14570	2.59e-139	395.0	COG0497@1|root,COG0497@2|Bacteria,1V4G3@1239|Firmicutes,4HHDM@91061|Bacilli,1ZH4B@1386|Bacillus	91061|Bacilli	L	Putative cell-wall binding lipoprotein	ykyA	-	-	-	-	-	-	-	-	-	-	-	YkyA
PHALIAPI_01511	224308.BSU14580	1.06e-258	710.0	COG1071@1|root,COG1071@2|Bacteria,1TQDG@1239|Firmicutes,4H9PQ@91061|Bacilli,1ZBE0@1386|Bacillus	91061|Bacilli	C	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit	pdhA	-	1.2.4.1	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh
PHALIAPI_01512	1051501.AYTL01000027_gene1050	3.52e-227	626.0	COG0022@1|root,COG0022@2|Bacteria,1TP3J@1239|Firmicutes,4HA4H@91061|Bacilli,1ZBJ1@1386|Bacillus	91061|Bacilli	C	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit	pdhB	-	1.2.4.1	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS05355,iYO844.BSU14590	Transket_pyr,Transketolase_C
PHALIAPI_01513	224308.BSU14600	1.47e-301	824.0	COG0508@1|root,COG0508@2|Bacteria,1TR5N@1239|Firmicutes,4HA7A@91061|Bacilli,1ZAQR@1386|Bacillus	91061|Bacilli	C	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	pdhC	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
PHALIAPI_01514	224308.BSU14610	0.0	911.0	COG1249@1|root,COG1249@2|Bacteria,1TP1W@1239|Firmicutes,4HB3K@91061|Bacilli,1ZCJR@1386|Bacillus	91061|Bacilli	C	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes	pdhD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
PHALIAPI_01515	224308.BSU14620	4.55e-83	245.0	COG0526@1|root,COG0526@2|Bacteria,1UAWB@1239|Firmicutes,4IM94@91061|Bacilli,1ZJHW@1386|Bacillus	91061|Bacilli	CO	COG0526, thiol-disulfide isomerase and thioredoxins	slp	-	-	-	-	-	-	-	-	-	-	-	HyaE
PHALIAPI_01517	224308.BSU14630	0.0	956.0	COG1982@1|root,COG1982@2|Bacteria,1TNZ9@1239|Firmicutes,4HBGC@91061|Bacilli,1ZAR0@1386|Bacillus	91061|Bacilli	E	Arginine	speA	GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008923,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564	4.1.1.17,4.1.1.19	ko:K01581,ko:K01585	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	M00133,M00134	R00566,R00670	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	OKR_DC_1,OKR_DC_1_C
PHALIAPI_01518	224308.BSU14640	1.34e-56	176.0	COG4476@1|root,COG4476@2|Bacteria,1VEK8@1239|Firmicutes,4HNKR@91061|Bacilli,1ZHT9@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0223 family	yktA	-	-	-	-	-	-	-	-	-	-	-	UPF0223
PHALIAPI_01519	224308.BSU14650	5.28e-152	427.0	COG4493@1|root,COG4493@2|Bacteria,1UY83@1239|Firmicutes,4HEDB@91061|Bacilli,1ZCEH@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0637 family	yktB	-	-	-	-	-	-	-	-	-	-	-	DUF1054
PHALIAPI_01520	224308.BSU14660	4.48e-35	120.0	29S19@1|root,30D5Q@2|Bacteria,1UAVY@1239|Firmicutes,4IM8R@91061|Bacilli,1ZJH7@1386|Bacillus	91061|Bacilli	-	-	ykzI	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01521	224308.BSU14670	3.18e-193	535.0	COG0483@1|root,COG0483@2|Bacteria,1TR4E@1239|Firmicutes,4HB92@91061|Bacilli,1ZAS1@1386|Bacillus	91061|Bacilli	G	Inositol monophosphatase	suhB	GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
PHALIAPI_01522	224308.BSU14680	2.36e-97	283.0	2FENS@1|root,346N3@2|Bacteria,1VZVT@1239|Firmicutes,4HYCA@91061|Bacilli,1ZIPR@1386|Bacillus	91061|Bacilli	S	Acetyltransferase (GNAT) family	ykzC	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_4
PHALIAPI_01523	224308.BSU14690	8.26e-220	606.0	COG3315@1|root,COG3315@2|Bacteria,1TSGJ@1239|Firmicutes,4HCZS@91061|Bacilli,1ZDGN@1386|Bacillus	91061|Bacilli	Q	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	LCM
PHALIAPI_01524	224308.BSU14700	0.0	1012.0	COG3227@1|root,COG3227@2|Bacteria,1TP08@1239|Firmicutes,4H9S6@91061|Bacilli,1ZCEP@1386|Bacillus	91061|Bacilli	E	Peptidase M4	mpl	GO:0005575,GO:0005576	3.4.24.28,3.4.24.29	ko:K01400,ko:K01401,ko:K19351	ko01503,ko05150,map01503,map05150	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	FTP,PepSY,Peptidase_M4,Peptidase_M4_C
PHALIAPI_01525	224308.BSU14710	0.0	1157.0	2FH24@1|root,348WX@2|Bacteria,1VZQR@1239|Firmicutes,4IJQ4@91061|Bacilli,1ZDGJ@1386|Bacillus	91061|Bacilli	-	-	ylaA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01526	224308.BSU14720	1.44e-56	176.0	29RZZ@1|root,30D4A@2|Bacteria,1UATQ@1239|Firmicutes,4IM6J@91061|Bacilli,1ZJBE@1386|Bacillus	91061|Bacilli	-	-	ylaB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01527	224308.BSU14730	1.76e-115	331.0	COG1595@1|root,COG1595@2|Bacteria,1V1S3@1239|Firmicutes,4HG2H@91061|Bacilli,1ZGKM@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	ylaC	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
PHALIAPI_01529	224308.BSU14750	5.7e-56	183.0	2AR0Q@1|root,31G9I@2|Bacteria,1U9T9@1239|Firmicutes,4IK0K@91061|Bacilli,1ZEZ2@1386|Bacillus	91061|Bacilli	-	-	ylaE	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01530	1051501.AYTL01000027_gene1064	1.06e-28	103.0	2DR2B@1|root,339VK@2|Bacteria,1VNV6@1239|Firmicutes	1239|Firmicutes	S	Family of unknown function (DUF5325)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5325
PHALIAPI_01531	224308.BSU14770	0.0	1189.0	COG1217@1|root,COG1217@2|Bacteria,1TQ5Y@1239|Firmicutes,4HAQ6@91061|Bacilli,1ZB9R@1386|Bacillus	91061|Bacilli	T	GTP-binding protein TypA	typA	-	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2
PHALIAPI_01532	224308.BSU14780	4.4e-63	193.0	2E309@1|root,32TAR@2|Bacteria,1VBNE@1239|Firmicutes,4HM33@91061|Bacilli,1ZI2F@1386|Bacillus	91061|Bacilli	S	YlaH-like protein	ylaH	-	-	-	-	-	-	-	-	-	-	-	YlaH
PHALIAPI_01533	224308.BSU14790	8.92e-44	142.0	COG4896@1|root,COG4896@2|Bacteria,1VFMW@1239|Firmicutes,4HNPM@91061|Bacilli,1ZIXV@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ylaI	-	-	-	-	-	-	-	-	-	-	-	DUF2197
PHALIAPI_01534	224308.BSU14800	2.97e-127	364.0	2A3AP@1|root,30RSQ@2|Bacteria,1VA69@1239|Firmicutes,4HKTQ@91061|Bacilli,1ZFXZ@1386|Bacillus	91061|Bacilli	S	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)	ylaJ	-	-	-	-	-	-	-	-	-	-	-	Spore_YhcN_YlaJ
PHALIAPI_01535	224308.BSU14810	5.64e-315	858.0	COG1875@1|root,COG1875@2|Bacteria,1UHTD@1239|Firmicutes,4HA4V@91061|Bacilli,1ZDIF@1386|Bacillus	91061|Bacilli	T	ATPase related to phosphate starvation-inducible protein PhoH	ylaK	-	-	ko:K07175	-	-	-	-	ko00000	-	-	-	PIN_4,PhoH
PHALIAPI_01536	224308.BSU14820	1.88e-111	320.0	COG2041@1|root,COG2041@2|Bacteria,1V1EZ@1239|Firmicutes,4HIWI@91061|Bacilli,1ZDPV@1386|Bacillus	91061|Bacilli	S	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide	ylaL	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01537	224308.BSU14830	4.25e-220	607.0	COG2066@1|root,COG2066@2|Bacteria,1TP64@1239|Firmicutes,4H9XA@91061|Bacilli,1ZBXX@1386|Bacillus	91061|Bacilli	E	Belongs to the glutaminase family	glsA	GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	iYO844.BSU02430	Glutaminase
PHALIAPI_01538	224308.BSU14840	6.94e-59	182.0	COG4838@1|root,COG4838@2|Bacteria,1VAXB@1239|Firmicutes,4HKIX@91061|Bacilli,1ZI2B@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0358 family	ylaN	-	-	-	-	-	-	-	-	-	-	-	DUF1507
PHALIAPI_01539	224308.BSU14850	3.49e-271	744.0	COG0772@1|root,COG0772@2|Bacteria,1TPT7@1239|Firmicutes,4HAEV@91061|Bacilli,1ZBDZ@1386|Bacillus	91061|Bacilli	D	Belongs to the SEDS family	ftsW	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03588	ko04112,map04112	-	-	-	ko00000,ko00001,ko02000,ko03036	2.A.103.1	-	-	FTSW_RODA_SPOVE
PHALIAPI_01540	224308.BSU14860	0.0	2271.0	COG1038@1|root,COG1038@2|Bacteria,1UHP9@1239|Firmicutes,4IS56@91061|Bacilli,1ZC4R@1386|Bacillus	91061|Bacilli	C	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second	pyc	-	6.4.1.1	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	M00173	R00344	RC00040,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2,HMGL-like,PYC_OADA
PHALIAPI_01541	224308.BSU14870	1.21e-213	590.0	COG1612@1|root,COG1612@2|Bacteria,1TR4W@1239|Firmicutes,4HC12@91061|Bacilli,1ZC0K@1386|Bacillus	91061|Bacilli	O	Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group	ctaA	GO:0000003,GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0019954,GO:0022607,GO:0030436,GO:0032502,GO:0034622,GO:0043933,GO:0043934,GO:0044085,GO:0065003,GO:0071840	-	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	M00154	R07412	RC00769	ko00000,ko00001,ko00002,ko03029	3.D.4.4	-	iSB619.SA_RS05460,iYO844.BSU14870	COX15-CtaA
PHALIAPI_01542	224308.BSU14880	1.7e-208	577.0	COG0109@1|root,COG0109@2|Bacteria,1TPS1@1239|Firmicutes,4HBJT@91061|Bacilli,1ZCJT@1386|Bacillus	91061|Bacilli	O	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group	ctaB	GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.141	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	M00154	R07411	RC01786	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	iSB619.SA_RS05465	UbiA
PHALIAPI_01543	224308.BSU14890	3.38e-252	692.0	COG1622@1|root,COG2010@1|root,COG1622@2|Bacteria,COG2010@2|Bacteria,1TRC3@1239|Firmicutes,4HADQ@91061|Bacilli,1ZAP8@1386|Bacillus	91061|Bacilli	C	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	ctaC	GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	COX2,COX2_TM,Cytochrom_C,Cytochrome_CBB3
PHALIAPI_01544	224308.BSU14900	0.0	1243.0	COG0843@1|root,COG0843@2|Bacteria,1TP2U@1239|Firmicutes,4HA4X@91061|Bacilli,1ZBD5@1386|Bacillus	91061|Bacilli	C	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B	ctaD	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009486,GO:0009987,GO:0015002,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0034220,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600	1.9.3.1	ko:K02274	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6	-	-	COX1
PHALIAPI_01545	224308.BSU14910	1.84e-145	410.0	COG1845@1|root,COG1845@2|Bacteria,1TQJ1@1239|Firmicutes,4HAHK@91061|Bacilli,1ZBVD@1386|Bacillus	91061|Bacilli	C	COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3	ctaE	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.9.3.1	ko:K02276	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.6	-	-	COX3
PHALIAPI_01546	224308.BSU14920	6.09e-70	211.0	COG3125@1|root,COG3125@2|Bacteria,1V855@1239|Firmicutes,4HJV7@91061|Bacilli,1ZH0W@1386|Bacillus	91061|Bacilli	C	COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4	ctaF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.9.3.1	ko:K02277	ko00190,ko01100,map00190,map01100	M00155	-	-	ko00000,ko00001,ko00002,ko01000	3.D.4.4	-	iYO844.BSU14920	COX4_pro
PHALIAPI_01547	224308.BSU14930	4.23e-214	591.0	COG3336@1|root,COG3336@2|Bacteria,1TQFK@1239|Firmicutes,4H9WN@91061|Bacilli,1ZBC8@1386|Bacillus	91061|Bacilli	S	cytochrome c oxidase	ctaG	-	-	ko:K02862	-	-	-	-	ko00000	-	-	-	Caa3_CtaG
PHALIAPI_01548	224308.BSU14940	6.56e-81	239.0	2AHI2@1|root,317VK@2|Bacteria,1V6HY@1239|Firmicutes,4HJHD@91061|Bacilli,1ZHCP@1386|Bacillus	91061|Bacilli	S	YugN-like family	ylbA	-	-	-	-	-	-	-	-	-	-	-	YugN
PHALIAPI_01549	224308.BSU14950	1.08e-97	284.0	COG2905@1|root,COG2905@2|Bacteria,1VW3X@1239|Firmicutes,4HJ81@91061|Bacilli,1ZH6S@1386|Bacillus	91061|Bacilli	T	COG0517 FOG CBS domain	ylbB	-	-	-	-	-	-	-	-	-	-	-	CBS
PHALIAPI_01550	224308.BSU14960	4.39e-256	702.0	COG2340@1|root,COG2340@2|Bacteria,1UYZ4@1239|Firmicutes,4HBTC@91061|Bacilli,1ZCGK@1386|Bacillus	91061|Bacilli	S	protein with SCP PR1 domains	ylbC	-	-	-	-	-	-	-	-	-	-	-	CAP,CAP_assoc_N
PHALIAPI_01551	224308.BSU14970	3.24e-89	261.0	2DV4S@1|root,32UYM@2|Bacteria,1VA7R@1239|Firmicutes,4HMUX@91061|Bacilli,1ZI1G@1386|Bacillus	91061|Bacilli	S	Putative coat protein	ylbD	-	-	-	-	-	-	-	-	-	-	-	YlbD_coat
PHALIAPI_01552	224308.BSU14980	1.73e-48	154.0	2ED1C@1|root,336YB@2|Bacteria,1VJ46@1239|Firmicutes,4HPWX@91061|Bacilli,1ZJ6S@1386|Bacillus	91061|Bacilli	S	YlbE-like protein	ylbE	-	-	-	-	-	-	-	-	-	-	-	YlbE
PHALIAPI_01553	224308.BSU14990	2.34e-97	283.0	COG3679@1|root,COG3679@2|Bacteria,1V3R6@1239|Firmicutes,4HGYS@91061|Bacilli,1ZG76@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0342 family	ylbF	-	-	-	-	-	-	-	-	-	-	-	Com_YlbF
PHALIAPI_01554	224308.BSU15000	4.36e-52	164.0	COG4471@1|root,COG4471@2|Bacteria,1VF52@1239|Firmicutes,4HNTH@91061|Bacilli,1ZI4I@1386|Bacillus	91061|Bacilli	S	UPF0298 protein	ylbG	-	-	-	-	-	-	-	-	-	-	-	DUF2129
PHALIAPI_01555	224308.BSU15010	6.07e-126	358.0	COG0742@1|root,COG0742@2|Bacteria,1V3JF@1239|Firmicutes,4HGXT@91061|Bacilli,1ZFNI@1386|Bacillus	91061|Bacilli	L	Methyltransferase	rsmD	-	2.1.1.171	ko:K08316	-	-	R07234	RC00003	ko00000,ko01000,ko03009	-	-	-	Cons_hypoth95
PHALIAPI_01556	224308.BSU15020	3.8e-111	319.0	COG0669@1|root,COG0669@2|Bacteria,1V3MR@1239|Firmicutes,4HH47@91061|Bacilli,1ZFNZ@1386|Bacillus	91061|Bacilli	H	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate	coaD	GO:0003674,GO:0003824,GO:0004595,GO:0006082,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0051186,GO:0051188,GO:0070566,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576	2.7.7.3	ko:K00954	ko00770,ko01100,map00770,map01100	M00120	R03035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
PHALIAPI_01557	224308.BSU15030	4.51e-281	769.0	COG3314@1|root,COG3314@2|Bacteria,1TR0V@1239|Firmicutes,4HB55@91061|Bacilli,1ZCCT@1386|Bacillus	91061|Bacilli	S	Sporulation integral membrane protein YlbJ	ylbJ	-	-	-	-	-	-	-	-	-	-	-	Gate
PHALIAPI_01558	224308.BSU15040	2.11e-175	490.0	COG1752@1|root,COG1752@2|Bacteria,1UUVB@1239|Firmicutes,4HDFQ@91061|Bacilli,1ZBCG@1386|Bacillus	91061|Bacilli	S	esterase of the alpha-beta hydrolase superfamily	ylbK	GO:0003674,GO:0003824,GO:0016787	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
PHALIAPI_01559	224308.BSU15050	2.51e-237	653.0	COG3480@1|root,COG3480@2|Bacteria,1TRUF@1239|Firmicutes,4HBAY@91061|Bacilli,1ZAW6@1386|Bacillus	91061|Bacilli	T	Belongs to the peptidase S16 family	ylbL	-	-	ko:K07177	ko02024,map02024	-	-	-	ko00000,ko00001,ko01002	-	-	-	Lon_C,PDZ_2
PHALIAPI_01560	224308.BSU25050	1.55e-18	84.3	28U06@1|root,2ZSTF@2|Bacteria,1W475@1239|Firmicutes,4I0TG@91061|Bacilli	91061|Bacilli	-	-	yqgA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01561	326423.RBAM_014920	7.68e-153	445.0	COG1323@1|root,COG1323@2|Bacteria,1TPP2@1239|Firmicutes,4HAZJ@91061|Bacilli,1ZC63@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0348 family	ylbM	-	-	-	-	-	-	-	-	-	-	-	HIGH_NTase1
PHALIAPI_01563	224308.BSU15070	6.94e-117	335.0	COG1399@1|root,COG1399@2|Bacteria,1VB08@1239|Firmicutes,4HME9@91061|Bacilli,1ZGJH@1386|Bacillus	91061|Bacilli	S	metal-binding, possibly nucleic acid-binding protein	ylbN	-	-	ko:K07040	-	-	-	-	ko00000	-	-	-	DUF177
PHALIAPI_01564	224308.BSU15080	1.71e-37	125.0	COG0333@1|root,COG0333@2|Bacteria,1VEFI@1239|Firmicutes,4HNIZ@91061|Bacilli	91061|Bacilli	J	Belongs to the bacterial ribosomal protein bL32 family	rpmF	GO:0003674,GO:0003735,GO:0005198	-	ko:K02911	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_L32p
PHALIAPI_01565	224308.BSU15090	4.72e-107	311.0	2C8MW@1|root,305IT@2|Bacteria,1V5HI@1239|Firmicutes,4HGP6@91061|Bacilli,1ZBX1@1386|Bacillus	91061|Bacilli	S	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	ylbO	-	-	ko:K06314	-	-	-	-	ko00000,ko03000	-	-	-	Myb_DNA-bind_6
PHALIAPI_01566	224308.BSU15100	1.33e-115	330.0	COG0454@1|root,COG0454@2|Bacteria,1V259@1239|Firmicutes,4HFSD@91061|Bacilli,1ZFN4@1386|Bacillus	91061|Bacilli	K	n-acetyltransferase	ylbP	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_7
PHALIAPI_01567	224308.BSU15110	1.08e-212	587.0	COG1893@1|root,COG1893@2|Bacteria,1V1NJ@1239|Firmicutes,4HFWT@91061|Bacilli,1ZFJY@1386|Bacillus	91061|Bacilli	H	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid	panE	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008677,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15110	ApbA,ApbA_C
PHALIAPI_01568	224308.BSU15120	0.0	1051.0	COG4365@1|root,COG4365@2|Bacteria,1TQ2P@1239|Firmicutes,4HA2Z@91061|Bacilli,1ZBMV@1386|Bacillus	91061|Bacilli	S	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH	bshC	-	-	ko:K22136	-	-	-	-	ko00000	-	-	-	BshC
PHALIAPI_01569	224308.BSU15130	9.82e-102	294.0	COG2001@1|root,COG2001@2|Bacteria,1V3JD@1239|Firmicutes,4HH23@91061|Bacilli,1ZFN0@1386|Bacillus	91061|Bacilli	K	Belongs to the MraZ family	mraZ	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141	-	ko:K03925	-	-	-	-	ko00000	-	-	-	MraZ
PHALIAPI_01570	224308.BSU15140	4.76e-218	602.0	COG0275@1|root,COG0275@2|Bacteria,1TNZV@1239|Firmicutes,4H9U2@91061|Bacilli,1ZCHN@1386|Bacillus	91061|Bacilli	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
PHALIAPI_01571	224308.BSU15150	3.42e-68	207.0	COG4839@1|root,COG4839@2|Bacteria,1VDUV@1239|Firmicutes,4HKM7@91061|Bacilli,1ZIVC@1386|Bacillus	91061|Bacilli	D	Essential cell division protein	ftsL	-	-	-	-	-	-	-	-	-	-	-	DivIC
PHALIAPI_01572	224308.BSU15160	0.0	1375.0	COG0768@1|root,COG0768@2|Bacteria,1TP93@1239|Firmicutes,4H9VQ@91061|Bacilli,1ZASE@1386|Bacillus	91061|Bacilli	M	Penicillin-binding Protein	pbpX	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011	-	-	-	PASTA,PBP_dimer,Transpeptidase
PHALIAPI_01573	224308.BSU15170	0.0	1267.0	COG0768@1|root,COG0768@2|Bacteria,1TP93@1239|Firmicutes,4H9VQ@91061|Bacilli,1ZBC0@1386|Bacillus	91061|Bacilli	M	stage V sporulation protein D	spoVD	-	-	ko:K08384	ko00550,map00550	-	-	-	ko00000,ko00001,ko01011	-	-	-	PASTA,PBP_dimer,Transpeptidase
PHALIAPI_01574	224308.BSU15180	0.0	967.0	COG0769@1|root,COG0769@2|Bacteria,1TPQE@1239|Firmicutes,4H9T1@91061|Bacilli,1ZB77@1386|Bacillus	91061|Bacilli	M	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan	murE	GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	6.3.2.13	ko:K01928	ko00300,ko00550,map00300,map00550	-	R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
PHALIAPI_01575	224308.BSU15190	9.59e-220	607.0	COG0472@1|root,COG0472@2|Bacteria,1TP8W@1239|Firmicutes,4H9TP@91061|Bacilli,1ZBIK@1386|Bacillus	91061|Bacilli	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	-	Glycos_transf_4,MraY_sig1
PHALIAPI_01576	224308.BSU15200	0.0	881.0	COG0771@1|root,COG0771@2|Bacteria,1TQ3P@1239|Firmicutes,4HA5P@91061|Bacilli,1ZARV@1386|Bacillus	91061|Bacilli	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase_C,Mur_ligase_M
PHALIAPI_01577	224308.BSU15210	6.64e-237	653.0	COG0772@1|root,COG0772@2|Bacteria,1TPT7@1239|Firmicutes,4HAEV@91061|Bacilli,1ZBY5@1386|Bacillus	91061|Bacilli	D	Belongs to the SEDS family	spoVE	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03588	ko04112,map04112	-	-	-	ko00000,ko00001,ko02000,ko03036	2.A.103.1	-	-	FTSW_RODA_SPOVE
PHALIAPI_01578	224308.BSU15220	7.74e-257	704.0	COG0707@1|root,COG0707@2|Bacteria,1TQFT@1239|Firmicutes,4HBAQ@91061|Bacilli,1ZBA5@1386|Bacillus	91061|Bacilli	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)	murG	-	2.4.1.227	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	-	R05032,R05662	RC00005,RC00049	ko00000,ko00001,ko01000,ko01011	-	GT28	-	Glyco_tran_28_C,Glyco_transf_28
PHALIAPI_01579	224308.BSU15230	3.74e-211	584.0	COG0812@1|root,COG0812@2|Bacteria,1TP3W@1239|Firmicutes,4HAD8@91061|Bacilli,1ZC3F@1386|Bacillus	91061|Bacilli	M	cell wall formation	murB	-	1.3.1.98	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R03191,R03192	RC02639	ko00000,ko00001,ko01000,ko01011	-	-	iYO844.BSU15230	FAD_binding_4,MurB_C
PHALIAPI_01580	224308.BSU15240	1.18e-178	498.0	COG1589@1|root,COG1589@2|Bacteria,1V6V5@1239|Firmicutes,4HDFD@91061|Bacilli,1ZDSW@1386|Bacillus	91061|Bacilli	D	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex	divIB	-	-	ko:K03589	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036	-	-	-	FtsQ,POTRA_1
PHALIAPI_01581	224308.BSU15250	2.23e-142	404.0	COG3879@1|root,COG3879@2|Bacteria,1V0FG@1239|Firmicutes,4HAN4@91061|Bacilli,1ZE4Z@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ylxW	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	DUF881
PHALIAPI_01582	224308.BSU15260	1.06e-132	378.0	COG3879@1|root,COG3879@2|Bacteria,1V2J7@1239|Firmicutes,4HG14@91061|Bacilli,1ZDER@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ylxX	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	DUF881
PHALIAPI_01583	224308.BSU15270	9.61e-74	221.0	COG3856@1|root,COG3856@2|Bacteria,1VA6N@1239|Firmicutes,4HIMZ@91061|Bacilli,1ZGAQ@1386|Bacillus	91061|Bacilli	S	small basic protein	sbp	-	-	-	-	-	-	-	-	-	-	-	DUF1290
PHALIAPI_01584	224308.BSU15280	2.82e-298	816.0	COG0849@1|root,COG0849@2|Bacteria,1TP1Z@1239|Firmicutes,4H9NF@91061|Bacilli,1ZBH1@1386|Bacillus	91061|Bacilli	D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring	ftsA	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0098552,GO:0098562	-	ko:K03590	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036,ko04812	-	-	-	DUF3484,FtsA,SHS2_FTSA
PHALIAPI_01585	224308.BSU15290	1.84e-260	715.0	COG0206@1|root,COG0206@2|Bacteria,1TP6W@1239|Firmicutes,4H9WZ@91061|Bacilli,1ZC2F@1386|Bacillus	91061|Bacilli	D	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity	ftsZ	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030428,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363	-	ko:K03531	ko04112,map04112	-	-	-	ko00000,ko00001,ko02048,ko03036,ko04812	-	-	-	FtsZ_C,Tubulin
PHALIAPI_01586	224308.BSU15300	0.0	2776.0	COG1404@1|root,COG4412@1|root,COG1404@2|Bacteria,COG4412@2|Bacteria,1TPUY@1239|Firmicutes,4HBDE@91061|Bacilli,1ZDEQ@1386|Bacillus	91061|Bacilli	O	COG1404 Subtilisin-like serine proteases	bpr	GO:0005575,GO:0005576	-	ko:K13276	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Inhibitor_I9,Peptidase_M6,Peptidase_S8
PHALIAPI_01588	224308.BSU15310	4.96e-219	604.0	29ECG@1|root,301AF@2|Bacteria,1UY4W@1239|Firmicutes,4HDX6@91061|Bacilli,1ZAV2@1386|Bacillus	91061|Bacilli	M	aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR	spoIIGA	GO:0003674,GO:0003824,GO:0004175,GO:0004190,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0043170,GO:0043621,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0070001,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564	-	ko:K06383	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_U4
PHALIAPI_01589	224308.BSU15320	1.48e-160	451.0	COG1191@1|root,COG1191@2|Bacteria,1TP3T@1239|Firmicutes,4H9PG@91061|Bacilli,1ZBKD@1386|Bacillus	91061|Bacilli	K	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	sigE	GO:0000003,GO:0000988,GO:0000990,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0043934,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141	-	ko:K03091	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4
PHALIAPI_01590	224308.BSU15330	7.99e-180	501.0	COG1191@1|root,COG1191@2|Bacteria,1TPDD@1239|Firmicutes,4H9MN@91061|Bacilli,1ZB53@1386|Bacillus	91061|Bacilli	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	sigG	-	-	ko:K03091	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r3,Sigma70_r4
PHALIAPI_01591	224308.BSU15340	6.37e-188	522.0	COG1119@1|root,COG1119@2|Bacteria,1TRR4@1239|Firmicutes,4HB4U@91061|Bacilli,1ZBUE@1386|Bacillus	91061|Bacilli	P	COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA	ylmA	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
PHALIAPI_01592	224308.BSU15350	0.0	863.0	COG0624@1|root,COG0624@2|Bacteria,1TQS9@1239|Firmicutes,4HBWM@91061|Bacilli,1ZQFB@1386|Bacillus	91061|Bacilli	E	Acetylornithine deacetylase	argE	-	-	ko:K20895	ko00730,ko01100,map00730,map01100	-	R11313	RC00197	ko00000,ko00001,ko01000	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
PHALIAPI_01593	224308.BSU15360	3.58e-51	161.0	COG1873@1|root,COG1873@2|Bacteria,1VEMT@1239|Firmicutes,4HNT3@91061|Bacilli,1ZI0Y@1386|Bacillus	91061|Bacilli	S	sporulation protein	ylmC	-	-	-	-	-	-	-	-	-	-	-	PRC
PHALIAPI_01594	224308.BSU15370	9.17e-204	563.0	COG1496@1|root,COG1496@2|Bacteria,1TS34@1239|Firmicutes,4HFUM@91061|Bacilli,1ZBZZ@1386|Bacillus	91061|Bacilli	S	Belongs to the multicopper oxidase YfiH RL5 family	ylmD	GO:0003674,GO:0005488,GO:0005507,GO:0043167,GO:0043169,GO:0046872,GO:0046914	-	ko:K05810	-	-	-	-	ko00000,ko01000	-	-	-	Cu-oxidase_4
PHALIAPI_01595	224308.BSU15380	9.03e-162	453.0	COG0325@1|root,COG0325@2|Bacteria,1TRDN@1239|Firmicutes,4HC45@91061|Bacilli,1ZARM@1386|Bacillus	91061|Bacilli	S	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis	ylmE	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363	-	ko:K06997	-	-	-	-	ko00000	-	-	-	Ala_racemase_N
PHALIAPI_01596	224308.BSU15390	4.47e-87	258.0	COG1799@1|root,COG1799@2|Bacteria,1VER3@1239|Firmicutes,4HKIC@91061|Bacilli,1ZGE0@1386|Bacillus	91061|Bacilli	D	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA	sepF	GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0032506,GO:0042802,GO:0044085,GO:0051301,GO:0071840,GO:0090529	-	ko:K09772	-	-	-	-	ko00000,ko03036	-	-	-	SepF
PHALIAPI_01597	224308.BSU15400	1.22e-53	168.0	COG0762@1|root,COG0762@2|Bacteria,1VEKA@1239|Firmicutes,4HNJR@91061|Bacilli,1ZHUZ@1386|Bacillus	91061|Bacilli	S	membrane	ylmG	-	-	ko:K02221	-	-	-	-	ko00000,ko02044	-	-	-	YGGT
PHALIAPI_01598	224308.BSU15410	1.49e-178	498.0	COG2302@1|root,COG2302@2|Bacteria,1U5V2@1239|Firmicutes,4HD3F@91061|Bacilli,1ZC97@1386|Bacillus	91061|Bacilli	S	conserved protein, contains S4-like domain	ylmH	-	-	-	-	-	-	-	-	-	-	-	S4
PHALIAPI_01599	224308.BSU15420	6.44e-100	291.0	COG3599@1|root,COG3599@2|Bacteria,1V27M@1239|Firmicutes,4HG80@91061|Bacilli,1ZFNB@1386|Bacillus	91061|Bacilli	D	Cell division initiation protein	divIVA	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K04074	-	-	-	-	ko00000,ko03036	-	-	-	DivIVA
PHALIAPI_01600	224308.BSU15430	0.0	1863.0	COG0060@1|root,COG0060@2|Bacteria,1TPS7@1239|Firmicutes,4HAWB@91061|Bacilli,1ZAQK@1386|Bacillus	91061|Bacilli	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	-	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1,zf-FPG_IleRS
PHALIAPI_01601	224308.BSU15440	7.55e-82	242.0	COG1734@1|root,COG1734@2|Bacteria,1UA3Y@1239|Firmicutes,4IKDQ@91061|Bacilli,1ZGM6@1386|Bacillus	91061|Bacilli	T	COG1734 DnaK suppressor protein	ylyA	-	-	-	-	-	-	-	-	-	-	-	zf-dskA_traR
PHALIAPI_01602	224308.BSU15450	2.71e-103	299.0	COG0597@1|root,COG0597@2|Bacteria,1VA9R@1239|Firmicutes,4HIR4@91061|Bacilli,1ZGBF@1386|Bacillus	91061|Bacilli	MU	This protein specifically catalyzes the removal of signal peptides from prolipoproteins	lspA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
PHALIAPI_01603	224308.BSU15460	2.04e-224	617.0	COG0564@1|root,COG0564@2|Bacteria,1TPCM@1239|Firmicutes,4HBG2@91061|Bacilli,1ZC3M@1386|Bacillus	91061|Bacilli	J	Responsible for synthesis of pseudouridine from uracil	rluD	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
PHALIAPI_01604	224308.BSU15470	4.45e-122	348.0	COG2065@1|root,COG2065@2|Bacteria,1V3GV@1239|Firmicutes,4HGYE@91061|Bacilli,1ZB3P@1386|Bacillus	91061|Bacilli	F	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant	pyrR	GO:0003674,GO:0003700,GO:0006139,GO:0006220,GO:0006221,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0031323,GO:0031326,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0140110,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141	2.4.2.9	ko:K02825	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000,ko03000	-	-	-	Pribosyltran
PHALIAPI_01605	224308.BSU15480	4.31e-295	807.0	COG2233@1|root,COG2233@2|Bacteria,1TQKX@1239|Firmicutes,4HAEU@91061|Bacilli,1ZBWN@1386|Bacillus	91061|Bacilli	F	Xanthine uracil	pyrP	-	-	ko:K02824	-	-	-	-	ko00000,ko02000	2.A.40.1.1,2.A.40.1.2	-	-	Xan_ur_permease
PHALIAPI_01606	224308.BSU15490	1.79e-214	592.0	COG0540@1|root,COG0540@2|Bacteria,1TQ96@1239|Firmicutes,4H9M6@91061|Bacilli,1ZBHG@1386|Bacillus	91061|Bacilli	F	Belongs to the ATCase OTCase family	pyrB	GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.3.2	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R01397	RC00064,RC02850	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15490	OTCace,OTCace_N
PHALIAPI_01607	224308.BSU15500	0.0	865.0	COG0044@1|root,COG0044@2|Bacteria,1TPQM@1239|Firmicutes,4HA90@91061|Bacilli,1ZAS7@1386|Bacillus	91061|Bacilli	F	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily	pyrC	GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
PHALIAPI_01608	224308.BSU15510	1.31e-269	737.0	COG0505@1|root,COG0505@2|Bacteria,1TQ8N@1239|Firmicutes,4H9Z0@91061|Bacilli,1ZB7G@1386|Bacillus	91061|Bacilli	F	Carbamoyl-phosphate synthetase glutamine chain	carA	GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	6.3.5.5	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15510	CPSase_sm_chain,GATase
PHALIAPI_01609	224308.BSU15520	0.0	2075.0	COG0458@1|root,COG0458@2|Bacteria,1TPID@1239|Firmicutes,4HAEY@91061|Bacilli,1ZCEM@1386|Bacillus	91061|Bacilli	F	Belongs to the CarB family	carB	GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_L_D2,CPSase_L_D3,MGS
PHALIAPI_01610	224308.BSU15530	7.44e-183	508.0	COG0543@1|root,COG0543@2|Bacteria,1TQ5D@1239|Firmicutes,4HAU4@91061|Bacilli,1ZBJI@1386|Bacillus	91061|Bacilli	C	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )	pyrK	GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042602,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0052875,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	-	ko:K02823	ko00240,ko01100,map00240,map01100	-	-	-	ko00000,ko00001	-	-	iYO844.BSU15530	DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1
PHALIAPI_01611	224308.BSU15540	5.18e-222	612.0	COG0167@1|root,COG0167@2|Bacteria,1TPFV@1239|Firmicutes,4HA5H@91061|Bacilli,1ZBNC@1386|Bacillus	91061|Bacilli	F	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily	pyrD	GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	1.3.1.14	ko:K17828	ko00240,ko01100,map00240,map01100	M00051	R01869	RC00051	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15540	DHO_dh
PHALIAPI_01612	224308.BSU15550	6.56e-164	459.0	COG0284@1|root,COG0284@2|Bacteria,1TPPH@1239|Firmicutes,4HAJ2@91061|Bacilli,1ZB1I@1386|Bacillus	91061|Bacilli	F	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)	pyrF	GO:0003674,GO:0003824,GO:0004590,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.23	ko:K01591	ko00240,ko01100,map00240,map01100	M00051	R00965	RC00409	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
PHALIAPI_01613	224308.BSU15560	3.65e-148	417.0	COG0461@1|root,COG0461@2|Bacteria,1V1BZ@1239|Firmicutes,4HFV7@91061|Bacilli,1ZASD@1386|Bacillus	91061|Bacilli	F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)	pyrE	-	2.4.2.10	ko:K00762	ko00240,ko01100,map00240,map01100	M00051	R01870	RC00611	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15560	Pribosyltran
PHALIAPI_01615	224308.BSU15570	3.44e-181	502.0	COG0175@1|root,COG0175@2|Bacteria,1TSMI@1239|Firmicutes,4HA9E@91061|Bacilli,1ZCBJ@1386|Bacillus	91061|Bacilli	EH	Belongs to the PAPS reductase family. CysH subfamily	cysH	GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114	1.8.4.10,1.8.4.8	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R02021	RC00007,RC02862	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15570	PAPS_reduct
PHALIAPI_01616	224308.BSU15580	8.54e-229	633.0	COG0306@1|root,COG0306@2|Bacteria,1TQ3D@1239|Firmicutes,4HAPD@91061|Bacilli,1ZBFE@1386|Bacillus	91061|Bacilli	P	phosphate transporter	cysP	GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661	-	ko:K16331	-	-	-	-	ko00000,ko02000	2.A.20.4	-	-	PHO4
PHALIAPI_01617	224308.BSU15590	2.62e-285	778.0	COG2046@1|root,COG2046@2|Bacteria,1TR4C@1239|Firmicutes,4HC20@91061|Bacilli,1ZCB4@1386|Bacillus	91061|Bacilli	P	Belongs to the sulfate adenylyltransferase family	sat	-	2.7.7.4	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00529,R04929	RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-sulfurylase,PUA_2
PHALIAPI_01618	224308.BSU15600	1.59e-141	399.0	COG0529@1|root,COG0529@2|Bacteria,1TQXK@1239|Firmicutes,4HB96@91061|Bacilli,1ZBCZ@1386|Bacillus	91061|Bacilli	P	Catalyzes the synthesis of activated sulfate	cysC	GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237	2.7.1.25	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	M00176	R00509,R04928	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	APS_kinase
PHALIAPI_01619	224308.BSU15610	7.18e-186	516.0	COG0007@1|root,COG0007@2|Bacteria,1TQNH@1239|Firmicutes,4HBB7@91061|Bacilli,1ZBV1@1386|Bacillus	91061|Bacilli	H	Belongs to the precorrin methyltransferase family	cobA	GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.1.107	ko:K02303	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03194	RC00003,RC00871	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15610	TP_methylase
PHALIAPI_01620	224308.BSU15620	9.78e-186	516.0	COG2138@1|root,COG2138@2|Bacteria,1TRDV@1239|Firmicutes,4H9RT@91061|Bacilli,1ZGH1@1386|Bacillus	91061|Bacilli	S	Sirohydrochlorin ferrochelatase	sirB	-	4.99.1.4	ko:K03794	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R02864	RC01012	ko00000,ko00001,ko00002,ko01000	-	-	-	CbiX
PHALIAPI_01621	224308.BSU15630	3.78e-107	309.0	COG1648@1|root,COG1648@2|Bacteria,1VA2E@1239|Firmicutes,4HIRG@91061|Bacilli,1ZHMG@1386|Bacillus	91061|Bacilli	H	Siroheme synthase	sirC	-	1.3.1.76,4.99.1.4	ko:K02304	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02864,R03947	RC01012,RC01034	ko00000,ko00001,ko00002,ko01000	-	-	-	NAD_binding_7,Sirohm_synth_M
PHALIAPI_01622	224308.BSU15640	0.0	1116.0	COG1293@1|root,COG1293@2|Bacteria,1TQ8A@1239|Firmicutes,4H9UF@91061|Bacilli,1ZBGD@1386|Bacillus	91061|Bacilli	K	RNA-binding protein homologous to eukaryotic snRNP	FbpA	-	-	-	-	-	-	-	-	-	-	-	DUF814,FbpA
PHALIAPI_01623	224308.BSU15650	0.0	1679.0	COG0474@1|root,COG0474@2|Bacteria,1TPF5@1239|Firmicutes,4H9S5@91061|Bacilli,1ZCDJ@1386|Bacillus	91061|Bacilli	P	COG0474 Cation transport ATPase	yloB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	iYO844.BSU15650	Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
PHALIAPI_01624	224308.BSU15660	8.41e-202	559.0	COG1561@1|root,COG1561@2|Bacteria,1TQHJ@1239|Firmicutes,4HAK9@91061|Bacilli,1ZCGE@1386|Bacillus	91061|Bacilli	S	stress-induced protein	yloC	-	-	-	-	-	-	-	-	-	-	-	DUF1732,YicC_N
PHALIAPI_01625	1051501.AYTL01000027_gene1154	3.97e-54	169.0	COG2052@1|root,COG2052@2|Bacteria,1VA40@1239|Firmicutes,4HKDP@91061|Bacilli,1ZHVQ@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0296 family	ylzA	-	-	ko:K09777	-	-	-	-	ko00000	-	-	-	DUF370
PHALIAPI_01626	224308.BSU15680	5.73e-143	403.0	COG0194@1|root,COG0194@2|Bacteria,1TP0M@1239|Firmicutes,4HAYW@91061|Bacilli,1ZBZI@1386|Bacillus	91061|Bacilli	F	Essential for recycling GMP and indirectly, cGMP	gmk	GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.4.8	ko:K00942	ko00230,ko01100,map00230,map01100	M00050	R00332,R02090	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15680	Guanylate_kin
PHALIAPI_01627	1051501.AYTL01000027_gene1156	6.21e-39	129.0	COG1758@1|root,COG1758@2|Bacteria,1VK74@1239|Firmicutes,4HNHS@91061|Bacilli,1ZIVD@1386|Bacillus	91061|Bacilli	K	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits	rpoZ	-	2.7.7.6	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb6
PHALIAPI_01628	224308.BSU15700	4.03e-283	775.0	COG0452@1|root,COG0452@2|Bacteria,1TPP3@1239|Firmicutes,4HAK8@91061|Bacilli,1ZD3R@1386|Bacillus	91061|Bacilli	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
PHALIAPI_01629	224308.BSU15710	0.0	1538.0	COG1198@1|root,COG1198@2|Bacteria,1TNYB@1239|Firmicutes,4H9WW@91061|Bacilli,1ZCBY@1386|Bacillus	91061|Bacilli	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,ResIII
PHALIAPI_01630	224308.BSU15720	4.8e-109	314.0	COG0242@1|root,COG0242@2|Bacteria,1V70B@1239|Firmicutes,4HHMA@91061|Bacilli,1ZGES@1386|Bacillus	91061|Bacilli	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008463,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
PHALIAPI_01631	224308.BSU15730	4.98e-223	615.0	COG0223@1|root,COG0223@2|Bacteria,1TQ32@1239|Firmicutes,4HART@91061|Bacilli,1ZBSP@1386|Bacillus	91061|Bacilli	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	fmt	GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.1.2.9	ko:K00604	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS06010	Formyl_trans_C,Formyl_trans_N
PHALIAPI_01632	224308.BSU15740	0.0	882.0	COG0144@1|root,COG0781@1|root,COG0144@2|Bacteria,COG0781@2|Bacteria,1TP3N@1239|Firmicutes,4HBQ6@91061|Bacilli,1ZCWU@1386|Bacillus	91061|Bacilli	J	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA	sun	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.176	ko:K03500	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltr_RsmB-F,Methyltr_RsmF_N,NusB
PHALIAPI_01633	224308.BSU15750	2.16e-263	721.0	COG0820@1|root,COG0820@2|Bacteria,1TPVF@1239|Firmicutes,4H9NU@91061|Bacilli,1ZBCJ@1386|Bacillus	91061|Bacilli	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	rlmN	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Fer4_14,Radical_SAM
PHALIAPI_01634	224308.BSU15760	5.87e-179	498.0	COG0631@1|root,COG0631@2|Bacteria,1V6K5@1239|Firmicutes,4HCDR@91061|Bacilli,1ZCYC@1386|Bacillus	91061|Bacilli	T	phosphatase	stp	-	3.1.3.16	ko:K20074	-	-	-	-	ko00000,ko01000,ko01009	-	-	-	PP2C,PP2C_2
PHALIAPI_01635	224308.BSU15770	0.0	1239.0	COG0515@1|root,COG2815@1|root,COG0515@2|Bacteria,COG2815@2|Bacteria,1TP3F@1239|Firmicutes,4H9KD@91061|Bacilli,1ZBBU@1386|Bacillus	91061|Bacilli	KLT	serine threonine protein kinase	prkC	GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701	2.7.11.1	ko:K08884,ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	PASTA,Pkinase
PHALIAPI_01636	224308.BSU15780	1.12e-214	592.0	COG1162@1|root,COG1162@2|Bacteria,1TPSQ@1239|Firmicutes,4HA9W@91061|Bacilli,1ZB4W@1386|Bacillus	91061|Bacilli	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit	rsgA	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase,RsgA_N
PHALIAPI_01637	224308.BSU15790	1.34e-152	429.0	COG0036@1|root,COG0036@2|Bacteria,1TQK8@1239|Firmicutes,4H9RW@91061|Bacilli,1ZCUF@1386|Bacillus	91061|Bacilli	G	Belongs to the ribulose-phosphate 3-epimerase family	rpe	GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575	5.1.3.1	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01529	RC00540	ko00000,ko00001,ko00002,ko01000	-	-	-	Ribul_P_3_epim
PHALIAPI_01638	224308.BSU15800	4.7e-156	437.0	COG1564@1|root,COG1564@2|Bacteria,1VA0W@1239|Firmicutes,4HHS1@91061|Bacilli,1ZD4A@1386|Bacillus	91061|Bacilli	H	thiamine pyrophosphokinase	thiN	-	2.7.6.2	ko:K00949	ko00730,ko01100,map00730,map01100	-	R00619	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	TPK_B1_binding,TPK_catalytic
PHALIAPI_01639	224308.BSU15820	7.06e-36	121.0	COG0227@1|root,COG0227@2|Bacteria,1VEI2@1239|Firmicutes,4HNIK@91061|Bacilli,1ZIVY@1386|Bacillus	91061|Bacilli	J	Belongs to the bacterial ribosomal protein bL28 family	rpmB	-	-	ko:K02902	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L28
PHALIAPI_01640	224308.BSU15830	3.65e-78	233.0	COG1302@1|root,COG1302@2|Bacteria,1V731@1239|Firmicutes,4HIS4@91061|Bacilli,1ZG6I@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yloU	-	-	-	-	-	-	-	-	-	-	-	Asp23
PHALIAPI_01641	224308.BSU15840	0.0	1041.0	COG1461@1|root,COG1461@2|Bacteria,1TQMX@1239|Firmicutes,4HBSE@91061|Bacilli,1ZBRP@1386|Bacillus	91061|Bacilli	S	kinase related to dihydroxyacetone kinase	yloV	-	-	ko:K07030	-	-	-	-	ko00000	-	-	-	Dak1_2,Dak2
PHALIAPI_01642	224308.BSU15850	1.45e-153	431.0	COG1760@1|root,COG1760@2|Bacteria,1U8TZ@1239|Firmicutes,4HBD6@91061|Bacilli,1ZCRK@1386|Bacillus	91061|Bacilli	E	L-serine dehydratase	sdaAB	GO:0003674,GO:0003824,GO:0003941,GO:0016829,GO:0016840,GO:0016841	4.3.1.17	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	-	R00220,R00590	RC00331,RC02600	ko00000,ko00001,ko01000	-	-	-	ACT,SDH_beta
PHALIAPI_01643	224308.BSU15860	1.19e-201	560.0	COG1760@1|root,COG1760@2|Bacteria,1TP79@1239|Firmicutes,4HAI1@91061|Bacilli,1ZC9A@1386|Bacillus	91061|Bacilli	E	L-serine dehydratase	sdaAA	GO:0003674,GO:0003824,GO:0003941,GO:0016829,GO:0016840,GO:0016841	4.3.1.17	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	-	R00220,R00590	RC00331,RC02600	ko00000,ko00001,ko01000	-	-	-	SDH_alpha
PHALIAPI_01644	224308.BSU15870	0.0	1332.0	COG1200@1|root,COG1200@2|Bacteria,1TQ6I@1239|Firmicutes,4HAWN@91061|Bacilli,1ZC17@1386|Bacillus	91061|Bacilli	L	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)	recG	GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecG_wedge
PHALIAPI_01645	224308.BSU15880	6.22e-121	346.0	COG1349@1|root,COG2050@1|root,COG1349@2|Bacteria,COG2050@2|Bacteria,1V3MJ@1239|Firmicutes,4HHFC@91061|Bacilli,1ZAV1@1386|Bacillus	91061|Bacilli	K	Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism	fapR	-	-	-	-	-	-	-	-	-	-	-	4HBT,HTH_DeoR,MaoC_dehydratas
PHALIAPI_01646	224308.BSU15890	8.33e-230	634.0	COG0416@1|root,COG0416@2|Bacteria,1TPXS@1239|Firmicutes,4HA0R@91061|Bacilli,1ZBW8@1386|Bacillus	91061|Bacilli	I	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA	plsX	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.3.1.15	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FA_synthesis
PHALIAPI_01647	224308.BSU15900	3.09e-217	600.0	COG0331@1|root,COG0331@2|Bacteria,1TPB7@1239|Firmicutes,4HBCU@91061|Bacilli,1ZBGQ@1386|Bacillus	91061|Bacilli	I	malonyl CoA-acyl carrier protein transacylase	fabD	-	2.3.1.39	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	M00082	R01626,R11671	RC00004,RC00039,RC02727	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	-	-	-	Acyl_transf_1
PHALIAPI_01648	224308.BSU15910	5.81e-166	465.0	COG1028@1|root,COG1028@2|Bacteria,1TP76@1239|Firmicutes,4HAA6@91061|Bacilli,1ZCDY@1386|Bacillus	91061|Bacilli	IQ	reductase	fabG	GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	iYO844.BSU15910	adh_short_C2
PHALIAPI_01649	1051501.AYTL01000027_gene1178	1.15e-43	142.0	COG0236@1|root,COG0236@2|Bacteria,1VEE3@1239|Firmicutes,4HNQ0@91061|Bacilli,1ZHY7@1386|Bacillus	91061|Bacilli	IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis	acpP	GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
PHALIAPI_01650	224308.BSU15930	2.12e-174	486.0	COG0571@1|root,COG0571@2|Bacteria,1TPGC@1239|Firmicutes,4HAWU@91061|Bacilli,1ZAPM@1386|Bacillus	91061|Bacilli	J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism	rnc	GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363	3.1.26.3	ko:K03685	ko03008,ko05205,map03008,map05205	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	-	-	-	Ribonucleas_3_3,dsrm
PHALIAPI_01651	224308.BSU15940	0.0	1899.0	COG1196@1|root,COG1196@2|Bacteria,1TPJV@1239|Firmicutes,4HB89@91061|Bacilli,1ZAWM@1386|Bacillus	91061|Bacilli	D	Required for chromosome condensation and partitioning	smc	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K03529	-	-	-	-	ko00000,ko03036	-	-	-	SMC_N,SMC_hinge
PHALIAPI_01652	224308.BSU15950	3.38e-227	627.0	COG0552@1|root,COG0552@2|Bacteria,1TPRI@1239|Firmicutes,4HA6A@91061|Bacilli,1ZB46@1386|Bacillus	91061|Bacilli	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)	ftsY	-	-	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2,3.A.5.7	-	-	SRP54,SRP54_N
PHALIAPI_01653	224308.BSU15960	1.67e-114	328.0	28M0G@1|root,2ZJQW@2|Bacteria,1V1BK@1239|Firmicutes,4HHTK@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01654	1051501.AYTL01000027_gene1184	5.64e-66	201.0	COG2739@1|root,COG2739@2|Bacteria,1VEGP@1239|Firmicutes,4HKK6@91061|Bacilli,1ZH7Z@1386|Bacillus	91061|Bacilli	S	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein	ylxM	GO:0003674,GO:0008150,GO:0030234,GO:0030695,GO:0050790,GO:0060589,GO:0065007,GO:0065009,GO:0098772	-	ko:K09787	-	-	-	-	ko00000	-	-	-	UPF0122
PHALIAPI_01655	224308.BSU15980	3.95e-308	841.0	COG0541@1|root,COG0541@2|Bacteria,1TP06@1239|Firmicutes,4H9T4@91061|Bacilli,1ZB4I@1386|Bacillus	91061|Bacilli	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY	ffh	-	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9	-	-	SRP54,SRP54_N,SRP_SPB
PHALIAPI_01656	1051501.AYTL01000027_gene1186	1.13e-58	181.0	COG0228@1|root,COG0228@2|Bacteria,1VA0X@1239|Firmicutes,4HKNN@91061|Bacilli,1ZGXP@1386|Bacillus	91061|Bacilli	J	Belongs to the bacterial ribosomal protein bS16 family	rpsP	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02959	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S16
PHALIAPI_01657	224308.BSU16000	1.2e-49	157.0	COG1837@1|root,COG1837@2|Bacteria,1VEG7@1239|Firmicutes,4HNX0@91061|Bacilli,1ZIW7@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0109 family	ylqC	-	-	ko:K06960	-	-	-	-	ko00000	-	-	-	KH_4
PHALIAPI_01658	224308.BSU16010	1.39e-79	237.0	2FI10@1|root,349TX@2|Bacteria,1W0UI@1239|Firmicutes,4HYP9@91061|Bacilli,1ZQSB@1386|Bacillus	91061|Bacilli	S	YlqD protein	ylqD	-	-	-	-	-	-	-	-	-	-	-	YlqD
PHALIAPI_01659	224308.BSU16020	1.84e-122	349.0	COG0806@1|root,COG0806@2|Bacteria,1V6HD@1239|Firmicutes,4HH3H@91061|Bacilli,1ZFP2@1386|Bacillus	91061|Bacilli	J	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes	rimM	-	-	ko:K02860	-	-	-	-	ko00000,ko03009	-	-	-	PRC,RimM
PHALIAPI_01660	224308.BSU16030	9.8e-177	492.0	COG0336@1|root,COG0336@2|Bacteria,1TPBV@1239|Firmicutes,4HBFV@91061|Bacilli,1ZD4X@1386|Bacillus	91061|Bacilli	J	Belongs to the RNA methyltransferase TrmD family	trmD	GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.228	ko:K00554	-	-	R00597	RC00003,RC00334	ko00000,ko01000,ko03016	-	-	-	tRNA_m1G_MT
PHALIAPI_01661	224308.BSU16040	8.14e-75	224.0	COG0335@1|root,COG0335@2|Bacteria,1V6FT@1239|Firmicutes,4HIK3@91061|Bacilli,1ZGDK@1386|Bacillus	91061|Bacilli	J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site	rplS	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02884	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L19
PHALIAPI_01662	224308.BSU16050	1.63e-199	553.0	COG1161@1|root,COG1161@2|Bacteria,1TQGK@1239|Firmicutes,4HA4D@91061|Bacilli,1ZB63@1386|Bacillus	91061|Bacilli	S	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity	rbgA	GO:0003674,GO:0003824,GO:0003924,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022613,GO:0042254,GO:0044085,GO:0071840	-	ko:K14540	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1
PHALIAPI_01663	224308.BSU16060	2.04e-175	489.0	COG0164@1|root,COG0164@2|Bacteria,1V1D6@1239|Firmicutes,4HB7M@91061|Bacilli,1ZB7H@1386|Bacillus	91061|Bacilli	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03470	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_HII
PHALIAPI_01664	224308.BSU16070	0.0	1055.0	2C5DW@1|root,2Z7RX@2|Bacteria,1TT0I@1239|Firmicutes,4HDMQ@91061|Bacilli,1ZCY5@1386|Bacillus	91061|Bacilli	-	-	ylqG	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01665	224308.BSU16080	1.7e-59	183.0	COG2257@1|root,COG2257@2|Bacteria,1VF4R@1239|Firmicutes,4HPCF@91061|Bacilli,1ZIW6@1386|Bacillus	91061|Bacilli	S	homolog of the cytoplasmic domain of flagellar protein FhlB	ylqH	-	-	ko:K04061	-	-	-	-	ko00000,ko02044	-	-	-	Bac_export_2
PHALIAPI_01666	224308.BSU16090	6.77e-269	737.0	COG0045@1|root,COG0045@2|Bacteria,1TQG4@1239|Firmicutes,4HA3W@91061|Bacilli,1ZB9P@1386|Bacillus	91061|Bacilli	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit	sucC	GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350	6.2.1.5	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU16090	ATP-grasp_2,Ligase_CoA
PHALIAPI_01667	224308.BSU16100	1.53e-213	590.0	COG0074@1|root,COG0074@2|Bacteria,1TPIT@1239|Firmicutes,4HA2J@91061|Bacilli,1ZCHE@1386|Bacillus	91061|Bacilli	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU16100	CoA_binding,Ligase_CoA
PHALIAPI_01668	224308.BSU16110	6.32e-171	480.0	COG0758@1|root,COG0758@2|Bacteria,1TPP7@1239|Firmicutes,4HGWM@91061|Bacilli,1ZBZ3@1386|Bacillus	91061|Bacilli	LU	Rossmann fold nucleotide-binding protein involved in DNA uptake	dprA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0044424,GO:0044464,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496	-	ko:K04096	-	-	-	-	ko00000	-	-	-	DNA_processg_A
PHALIAPI_01669	224308.BSU16120	0.0	1375.0	COG0550@1|root,COG0550@2|Bacteria,1TPUS@1239|Firmicutes,4HA6C@91061|Bacilli,1ZB7D@1386|Bacillus	91061|Bacilli	L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone	topA	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_bac,Toprim,zf-C4_Topoisom
PHALIAPI_01670	224308.BSU16130	5.45e-314	855.0	COG1206@1|root,COG1206@2|Bacteria,1TP67@1239|Firmicutes,4HB27@91061|Bacilli,1ZAR2@1386|Bacillus	91061|Bacilli	J	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs	trmFO	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363	2.1.1.74	ko:K04094	-	-	-	-	ko00000,ko01000,ko03016,ko03036	-	-	-	GIDA
PHALIAPI_01671	224308.BSU16140	3.23e-217	599.0	COG4974@1|root,COG4974@2|Bacteria,1TPQB@1239|Firmicutes,4HARA@91061|Bacilli,1ZB91@1386|Bacillus	91061|Bacilli	L	tyrosine recombinase XerC	xerC	-	-	ko:K03733,ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
PHALIAPI_01672	224308.BSU16150	3.01e-120	344.0	COG5405@1|root,COG5405@2|Bacteria,1TPXK@1239|Firmicutes,4H9PD@91061|Bacilli,1ZCMN@1386|Bacillus	91061|Bacilli	O	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery	hslV	-	3.4.25.2	ko:K01419	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Proteasome
PHALIAPI_01673	224308.BSU16160	0.0	877.0	COG1220@1|root,COG1220@2|Bacteria,1TPKQ@1239|Firmicutes,4HA83@91061|Bacilli,1ZCWK@1386|Bacillus	91061|Bacilli	O	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis	hslU	-	-	ko:K03667	-	-	-	-	ko00000,ko03110	-	-	-	AAA_2,ClpB_D2-small
PHALIAPI_01674	1051501.AYTL01000027_gene1204	1.95e-175	490.0	COG4465@1|root,COG4465@2|Bacteria,1TS7A@1239|Firmicutes,4HA9U@91061|Bacilli,1ZBT9@1386|Bacillus	91061|Bacilli	K	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor	codY	GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	ko:K03706	-	-	-	-	ko00000,ko03000	-	-	-	CodY,HTH_CodY
PHALIAPI_01675	224308.BSU16180	1.62e-83	247.0	COG1815@1|root,COG1815@2|Bacteria,1VIK5@1239|Firmicutes,4HX5S@91061|Bacilli,1ZQN0@1386|Bacillus	91061|Bacilli	N	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body	flgB	GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588	-	ko:K02387	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod
PHALIAPI_01676	224308.BSU16190	2.16e-98	286.0	COG1558@1|root,COG1558@2|Bacteria,1V6NB@1239|Firmicutes,4HH4W@91061|Bacilli,1ZGA0@1386|Bacillus	91061|Bacilli	N	Belongs to the flagella basal body rod proteins family	flgC	GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588	-	ko:K02388	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
PHALIAPI_01677	224308.BSU16200	5.5e-53	168.0	COG1677@1|root,COG1677@2|Bacteria,1VEEY@1239|Firmicutes,4HNZW@91061|Bacilli,1ZIT0@1386|Bacillus	91061|Bacilli	N	Flagellar hook-basal body	fliE	-	-	ko:K02408	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliE
PHALIAPI_01678	224308.BSU16210	0.0	931.0	COG1766@1|root,COG1766@2|Bacteria,1TRK0@1239|Firmicutes,4HBF0@91061|Bacilli,1ZAZN@1386|Bacillus	91061|Bacilli	N	The M ring may be actively involved in energy transduction	fliF	-	-	ko:K02409	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	YscJ_FliF,YscJ_FliF_C
PHALIAPI_01679	1051501.AYTL01000027_gene1209	6.08e-230	634.0	COG1536@1|root,COG1536@2|Bacteria,1TP01@1239|Firmicutes,4HAFZ@91061|Bacilli,1ZAQU@1386|Bacillus	91061|Bacilli	N	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation	fliG	-	-	ko:K02410	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliG_C,FliG_M,FliG_N
PHALIAPI_01680	1051501.AYTL01000027_gene1210	7.8e-144	409.0	COG1317@1|root,COG1317@2|Bacteria,1VEUV@1239|Firmicutes,4HG3R@91061|Bacilli,1ZE47@1386|Bacillus	91061|Bacilli	NU	COG1317 Flagellar biosynthesis type III secretory pathway protein	fliH	-	-	ko:K02411	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	FliH
PHALIAPI_01681	224308.BSU16240	1.59e-303	829.0	COG1157@1|root,COG1157@2|Bacteria,1TP0R@1239|Firmicutes,4HAUY@91061|Bacilli,1ZBXU@1386|Bacillus	91061|Bacilli	NU	COG1157 Flagellar biosynthesis type III secretory pathway ATPase	fliI	-	3.6.3.14	ko:K02412	ko02040,map02040	-	-	-	ko00000,ko00001,ko01000,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	ATP-synt_ab,ATP-synt_ab_N
PHALIAPI_01682	224308.BSU16250	1.79e-91	268.0	COG2882@1|root,COG2882@2|Bacteria,1V6SQ@1239|Firmicutes,4HJZP@91061|Bacilli,1ZGXV@1386|Bacillus	91061|Bacilli	N	Flagellar biosynthesis chaperone	fliJ	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02413	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliJ
PHALIAPI_01683	224308.BSU16260	7.92e-81	246.0	COG3334@1|root,COG3334@2|Bacteria,1V87H@1239|Firmicutes,4HM5Z@91061|Bacilli,1ZCXR@1386|Bacillus	91061|Bacilli	S	MgtE intracellular N domain	ylxF	-	-	-	-	-	-	-	-	-	-	-	MgtE_N
PHALIAPI_01684	224308.BSU16270	3.66e-311	852.0	COG3144@1|root,COG3144@2|Bacteria,1VI6B@1239|Firmicutes,4HGUR@91061|Bacilli,1ZERA@1386|Bacillus	91061|Bacilli	N	Flagellar hook-length control protein	fliK	GO:0001539,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588	-	ko:K02414	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_hook
PHALIAPI_01685	224308.BSU16280	4.67e-95	277.0	COG1843@1|root,COG1843@2|Bacteria,1VF85@1239|Firmicutes,4HNQK@91061|Bacilli,1ZI5S@1386|Bacillus	91061|Bacilli	N	Flagellar basal body rod modification protein	flgD	GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588	-	ko:K02389	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgD
PHALIAPI_01686	224308.BSU16290	1.73e-176	493.0	COG4786@1|root,COG4786@2|Bacteria,1TRA2@1239|Firmicutes,4HBNB@91061|Bacilli,1ZCVW@1386|Bacillus	91061|Bacilli	N	Flagellar basal body rod	flgG	GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588	-	ko:K02390	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
PHALIAPI_01687	224308.BSU16300	2.28e-77	232.0	COG1580@1|root,COG1580@2|Bacteria,1V6K9@1239|Firmicutes,4HIJZ@91061|Bacilli,1ZI2U@1386|Bacillus	91061|Bacilli	N	Controls the rotational direction of flagella during chemotaxis	fliL	-	-	ko:K02415	-	-	-	-	ko00000,ko02035	-	-	-	FliL
PHALIAPI_01688	224308.BSU16310	6.61e-231	636.0	COG1868@1|root,COG1868@2|Bacteria,1TPTM@1239|Firmicutes,4HAAY@91061|Bacilli,1ZCI6@1386|Bacillus	91061|Bacilli	N	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation	fliM	GO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0008150,GO:0009288,GO:0009425,GO:0009605,GO:0016020,GO:0040011,GO:0042221,GO:0042330,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0050896,GO:0050918,GO:0071944	-	ko:K02416	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliM,FliMN_C
PHALIAPI_01689	224308.BSU16320	1.38e-253	697.0	COG1776@1|root,COG1886@1|root,COG1776@2|Bacteria,COG1886@2|Bacteria,1TPT8@1239|Firmicutes,4HC56@91061|Bacilli,1ZB7S@1386|Bacillus	91061|Bacilli	N	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation	fliY	GO:0003674,GO:0003824,GO:0004721,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0032879,GO:0036211,GO:0040011,GO:0040012,GO:0042221,GO:0042330,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051270,GO:0065007,GO:0071704,GO:0140096,GO:1901564,GO:1902021,GO:2000145	-	ko:K02417	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	CheC,FliMN_C
PHALIAPI_01690	224308.BSU16330	1.22e-76	229.0	COG2201@1|root,COG2201@2|Bacteria,1V3IU@1239|Firmicutes,4HGY2@91061|Bacilli,1ZG7Q@1386|Bacillus	91061|Bacilli	T	response regulator	cheY	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
PHALIAPI_01691	224308.BSU16340	4.35e-134	382.0	COG3190@1|root,COG3190@2|Bacteria,1VGFI@1239|Firmicutes,4HJJQ@91061|Bacilli,1ZQNA@1386|Bacillus	91061|Bacilli	N	Flagellar biosynthesis protein, FliO	fliZ	-	-	ko:K02418	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	FliO
PHALIAPI_01692	224308.BSU16350	1.21e-141	401.0	COG1338@1|root,COG1338@2|Bacteria,1TPIE@1239|Firmicutes,4HA79@91061|Bacilli,1ZCWT@1386|Bacillus	91061|Bacilli	N	Plays a role in the flagellum-specific transport system	fliP	-	-	ko:K02419	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	FliP
PHALIAPI_01693	224308.BSU16360	5.23e-50	159.0	COG1987@1|root,COG1987@2|Bacteria,1VEHF@1239|Firmicutes,4HKVS@91061|Bacilli,1ZI12@1386|Bacillus	91061|Bacilli	N	Role in flagellar biosynthesis	fliQ	-	-	ko:K02420	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_3
PHALIAPI_01694	224308.BSU16370	1.21e-169	475.0	COG1684@1|root,COG1684@2|Bacteria,1TRB2@1239|Firmicutes,4HA2E@91061|Bacilli,1ZBJF@1386|Bacillus	91061|Bacilli	N	Flagellar biosynthetic protein FliR	fliR	-	-	ko:K02421	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_1
PHALIAPI_01695	224308.BSU16380	5.53e-244	672.0	COG1377@1|root,COG1377@2|Bacteria,1TPRP@1239|Firmicutes,4HB7Y@91061|Bacilli,1ZBSH@1386|Bacillus	91061|Bacilli	N	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin	flhB	-	-	ko:K02401	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_2
PHALIAPI_01696	224308.BSU16390	0.0	1248.0	COG1298@1|root,COG1298@2|Bacteria,1TQBM@1239|Firmicutes,4H9XU@91061|Bacilli,1ZBID@1386|Bacillus	91061|Bacilli	N	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin	flhA	-	-	ko:K02400	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	FHIPEP
PHALIAPI_01697	224308.BSU16400	5.65e-256	702.0	COG1419@1|root,COG1419@2|Bacteria,1TSP7@1239|Firmicutes,4H9VG@91061|Bacilli,1ZCJ9@1386|Bacillus	91061|Bacilli	N	Flagellar biosynthesis regulator FlhF	flhF	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K02404	-	-	-	-	ko00000,ko02035	-	-	-	SRP54
PHALIAPI_01698	224308.BSU16410	1.55e-200	556.0	COG0455@1|root,COG0455@2|Bacteria,1TRZ5@1239|Firmicutes,4HCWZ@91061|Bacilli,1ZE3G@1386|Bacillus	91061|Bacilli	D	Belongs to the ParA family	ylxH	-	-	ko:K04562	-	-	-	-	ko00000,ko02035	-	-	-	AAA_31,CbiA,ParA
PHALIAPI_01699	224308.BSU16420	1.49e-251	691.0	COG2201@1|root,COG2201@2|Bacteria,1TRHC@1239|Firmicutes,4HBJY@91061|Bacilli,1ZC36@1386|Bacillus	91061|Bacilli	NT	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	cheB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,Response_reg
PHALIAPI_01700	224308.BSU16430	0.0	1265.0	COG0643@1|root,COG2198@1|root,COG0643@2|Bacteria,COG2198@2|Bacteria,1TPMS@1239|Firmicutes,4HAQD@91061|Bacilli,1ZATW@1386|Bacillus	91061|Bacilli	NT	COG0643 Chemotaxis protein histidine kinase and related kinases	cheA	-	2.7.13.3	ko:K03407	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	CheW,H-kinase_dim,HATPase_c,Hpt,P2
PHALIAPI_01701	224308.BSU16440	1.56e-103	300.0	COG0835@1|root,COG0835@2|Bacteria,1V4HH@1239|Firmicutes,4HHB5@91061|Bacilli,1ZGZE@1386|Bacillus	91061|Bacilli	NT	COG0835 Chemotaxis signal transduction protein	cheW	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006935,GO:0008150,GO:0009453,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0042333,GO:0044424,GO:0044444,GO:0044464,GO:0050896	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
PHALIAPI_01702	224308.BSU16450	5.06e-144	406.0	COG1776@1|root,COG1776@2|Bacteria,1UNKB@1239|Firmicutes,4HB40@91061|Bacilli,1ZDIE@1386|Bacillus	91061|Bacilli	NT	COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation	cheC	GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0050896,GO:0050918	-	ko:K03410	ko02030,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheC,CheX
PHALIAPI_01703	224308.BSU16460	3.34e-112	322.0	COG1871@1|root,COG1871@2|Bacteria,1V70X@1239|Firmicutes,4HIVG@91061|Bacilli,1ZGE3@1386|Bacillus	91061|Bacilli	NT	Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase	cheD	-	3.5.1.44	ko:K03411	ko02030,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheD
PHALIAPI_01704	224308.BSU16470	6.57e-176	491.0	COG1191@1|root,COG1191@2|Bacteria,1TP9K@1239|Firmicutes,4HCJV@91061|Bacilli,1ZAPF@1386|Bacillus	91061|Bacilli	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	sigD	-	-	ko:K02405	ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111	-	-	-	ko00000,ko00001,ko02035,ko03021	-	-	-	Sigma70_r2,Sigma70_r3,Sigma70_r4
PHALIAPI_01705	224308.BSU16480	4.66e-99	289.0	2D5MU@1|root,32TJF@2|Bacteria,1V9ZA@1239|Firmicutes,4HMQI@91061|Bacilli,1ZF9N@1386|Bacillus	91061|Bacilli	-	-	ylxL	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01706	224308.BSU16490	1.49e-168	471.0	COG0052@1|root,COG0052@2|Bacteria,1TPNA@1239|Firmicutes,4H9N5@91061|Bacilli,1ZAYU@1386|Bacillus	91061|Bacilli	J	Belongs to the universal ribosomal protein uS2 family	rpsB	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
PHALIAPI_01707	224308.BSU16500	9.82e-202	559.0	COG0264@1|root,COG0264@2|Bacteria,1TPFJ@1239|Firmicutes,4HBDV@91061|Bacilli,1ZB7R@1386|Bacillus	91061|Bacilli	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome	tsf	GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005623,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065	-	ko:K02357	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EF_TS
PHALIAPI_01708	224308.BSU16510	5.82e-163	457.0	COG0528@1|root,COG0528@2|Bacteria,1TPXN@1239|Firmicutes,4H9UB@91061|Bacilli,1ZBMW@1386|Bacillus	91061|Bacilli	F	Catalyzes the reversible phosphorylation of UMP to UDP	pyrH	-	2.7.4.22	ko:K09903	ko00240,ko01100,map00240,map01100	-	R00158	RC00002	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS06240	AA_kinase
PHALIAPI_01709	224308.BSU16520	9.6e-119	340.0	COG0233@1|root,COG0233@2|Bacteria,1V1F2@1239|Firmicutes,4HFSH@91061|Bacilli,1ZAZF@1386|Bacillus	91061|Bacilli	J	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another	frr	GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K02838	-	-	-	-	ko00000,ko03012	-	-	-	RRF
PHALIAPI_01710	224308.BSU16530	1.1e-186	518.0	COG0020@1|root,COG0020@2|Bacteria,1TQTS@1239|Firmicutes,4HA37@91061|Bacilli,1ZC2T@1386|Bacillus	91061|Bacilli	I	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	uppS	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
PHALIAPI_01711	224308.BSU16540	5.77e-179	499.0	COG4589@1|root,COG4589@2|Bacteria,1TT0Q@1239|Firmicutes,4HAMN@91061|Bacilli,1ZBWF@1386|Bacillus	91061|Bacilli	S	Belongs to the CDS family	cdsA	GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS06255	CTP_transf_1
PHALIAPI_01712	224308.BSU16550	1.39e-276	756.0	COG0743@1|root,COG0743@2|Bacteria,1TP1C@1239|Firmicutes,4HBAV@91061|Bacilli,1ZC3I@1386|Bacillus	91061|Bacilli	I	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)	dxr	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576	1.1.1.267	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05688	RC01452	ko00000,ko00001,ko00002,ko01000	-	-	-	DXPR_C,DXP_redisom_C,DXP_reductoisom
PHALIAPI_01713	224308.BSU16560	5.62e-293	801.0	COG0750@1|root,COG0750@2|Bacteria,1TPMC@1239|Firmicutes,4HAQ5@91061|Bacilli,1ZCPQ@1386|Bacillus	91061|Bacilli	M	zinc metalloprotease	rasP	-	-	ko:K11749	ko02024,ko04112,map02024,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_M50
PHALIAPI_01714	224308.BSU16570	0.0	1106.0	COG0442@1|root,COG0442@2|Bacteria,1TRBV@1239|Firmicutes,4H9NN@91061|Bacilli,1ZD7M@1386|Bacillus	91061|Bacilli	J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS	proS	-	6.1.1.15	ko:K01881	ko00970,map00970	M00359,M00360	R03661	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_2b,tRNA_edit
PHALIAPI_01715	224308.BSU16580	0.0	2852.0	COG2176@1|root,COG2176@2|Bacteria,1TPAG@1239|Firmicutes,4H9RF@91061|Bacilli,1ZCIB@1386|Bacillus	91061|Bacilli	L	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity	polC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.7.7.7	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_a_NI,DNA_pol3_a_NII,DNA_pol3_alpha,HHH_6,PHP,RNase_T,tRNA_anti-codon
PHALIAPI_01716	224308.BSU16590	1.34e-104	302.0	COG0779@1|root,COG0779@2|Bacteria,1V6KT@1239|Firmicutes,4HH88@91061|Bacilli,1ZG6S@1386|Bacillus	91061|Bacilli	S	Required for maturation of 30S ribosomal subunits	rimP	GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K09748	-	-	-	-	ko00000,ko03009	-	-	-	DUF150,DUF150_C
PHALIAPI_01717	224308.BSU16600	5.49e-261	716.0	COG0195@1|root,COG0195@2|Bacteria,1TPB3@1239|Firmicutes,4HA7F@91061|Bacilli,1ZDAH@1386|Bacillus	91061|Bacilli	K	Participates in both transcription termination and antitermination	nusA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141	-	ko:K02600	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	KH_5,NusA_N,S1
PHALIAPI_01718	224308.BSU16610	2.01e-57	178.0	COG2740@1|root,COG2740@2|Bacteria,1VEJS@1239|Firmicutes,4HKBY@91061|Bacilli,1ZHSV@1386|Bacillus	91061|Bacilli	K	nucleic-acid-binding protein implicated in transcription termination	ylxR	-	-	ko:K07742	-	-	-	-	ko00000	-	-	-	DUF448
PHALIAPI_01719	224308.BSU16620	6.16e-63	192.0	COG1358@1|root,COG1358@2|Bacteria,1VEYG@1239|Firmicutes,4HNY7@91061|Bacilli,1ZI1N@1386|Bacillus	91061|Bacilli	J	ribosomal protein	ylxQ	-	-	-	-	-	-	-	-	-	-	-	Ribosomal_L7Ae
PHALIAPI_01720	224308.BSU16630	0.0	1304.0	COG0532@1|root,COG0532@2|Bacteria,1TPAI@1239|Firmicutes,4HA8S@91061|Bacilli,1ZBWA@1386|Bacillus	91061|Bacilli	J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex	infB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K02519	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	GTP_EFTU,IF-2,IF2_N
PHALIAPI_01721	224308.BSU16640	1.11e-59	184.0	COG1550@1|root,COG1550@2|Bacteria,1VEHY@1239|Firmicutes,4HNXC@91061|Bacilli,1ZI43@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ylxP	-	-	ko:K09764	-	-	-	-	ko00000	-	-	-	DUF503
PHALIAPI_01722	224308.BSU16650	3.29e-75	225.0	COG0858@1|root,COG0858@2|Bacteria,1VA0P@1239|Firmicutes,4HII1@91061|Bacilli,1ZGB3@1386|Bacillus	91061|Bacilli	J	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA	rbfA	-	-	ko:K02834	-	-	-	-	ko00000,ko03009	-	-	-	RBFA
PHALIAPI_01723	224308.BSU16660	6.04e-220	607.0	COG0130@1|root,COG0130@2|Bacteria,1TP9Y@1239|Firmicutes,4HA9X@91061|Bacilli,1ZBKE@1386|Bacillus	91061|Bacilli	J	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs	truB	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481	5.4.99.25	ko:K03177,ko:K03483	-	-	-	-	ko00000,ko01000,ko03000,ko03016	-	-	iSB619.SA_RS06305	TruB-C_2,TruB_C_2,TruB_N
PHALIAPI_01724	224308.BSU16670	4.48e-230	633.0	COG0196@1|root,COG0196@2|Bacteria,1TPKS@1239|Firmicutes,4H9KE@91061|Bacilli,1ZBFH@1386|Bacillus	91061|Bacilli	H	Belongs to the ribF family	ribF	-	2.7.1.26,2.7.7.2	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS06310	FAD_syn,Flavokinase
PHALIAPI_01725	224308.BSU16680	7.11e-57	176.0	COG0184@1|root,COG0184@2|Bacteria,1VA5C@1239|Firmicutes,4HKE9@91061|Bacilli,1ZH7M@1386|Bacillus	91061|Bacilli	J	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome	rpsO	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02956	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S15
PHALIAPI_01726	224308.BSU16690	0.0	1332.0	COG1185@1|root,COG1185@2|Bacteria,1TQDW@1239|Firmicutes,4H9Z3@91061|Bacilli,1ZB24@1386|Bacillus	91061|Bacilli	J	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction	pnp	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575	2.7.7.8	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	M00394	R00437,R00438,R00439,R00440	RC02795	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	KH_1,PNPase,RNase_PH,RNase_PH_C,S1
PHALIAPI_01727	224308.BSU16700	3.71e-235	646.0	COG0726@1|root,COG0726@2|Bacteria,1TQ5M@1239|Firmicutes,4HAHC@91061|Bacilli,1ZC6V@1386|Bacillus	91061|Bacilli	G	Sporulation protein, polysaccharide deacetylase	ylxY	GO:0005575,GO:0016020	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
PHALIAPI_01728	224308.BSU16710	1.62e-295	806.0	COG0612@1|root,COG0612@2|Bacteria,1TP5I@1239|Firmicutes,4HBBF@91061|Bacilli,1ZDJE@1386|Bacillus	91061|Bacilli	S	Belongs to the peptidase M16 family	mlpA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
PHALIAPI_01729	224308.BSU16720	1.53e-56	175.0	COG1873@1|root,COG1873@2|Bacteria,1VEJW@1239|Firmicutes,4HPFQ@91061|Bacilli,1ZI6Z@1386|Bacillus	91061|Bacilli	S	YlmC YmxH family	ymxH	-	-	-	-	-	-	-	-	-	-	-	PRC
PHALIAPI_01730	224308.BSU16730	5.3e-208	575.0	COG1052@1|root,COG1052@2|Bacteria,1UI1W@1239|Firmicutes,4HA71@91061|Bacilli,1ZAZJ@1386|Bacillus	91061|Bacilli	CH	Dipicolinate synthase subunit A	dpaA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0016618,GO:0030267,GO:0044424,GO:0044444,GO:0044464,GO:0055114	-	ko:K06410	-	-	-	-	ko00000	-	-	iYO844.BSU16730	2-Hacid_dh_C,AlaDh_PNT_C,DpaA_N
PHALIAPI_01731	224308.BSU16740	1.16e-140	397.0	COG0452@1|root,COG0452@2|Bacteria,1TQPT@1239|Firmicutes,4HAU9@91061|Bacilli,1ZCJQ@1386|Bacillus	91061|Bacilli	H	Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)	spoVFB	-	-	ko:K06411	-	-	-	-	ko00000	-	-	iYO844.BSU16740	Flavoprotein
PHALIAPI_01732	224308.BSU16750	1.12e-245	675.0	COG0136@1|root,COG0136@2|Bacteria,1TPC6@1239|Firmicutes,4HA9H@91061|Bacilli,1ZAVS@1386|Bacillus	91061|Bacilli	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate	asd	-	1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
PHALIAPI_01733	224308.BSU16760	4.9e-283	774.0	COG0527@1|root,COG0527@2|Bacteria,1TPQJ@1239|Firmicutes,4HADX@91061|Bacilli,1ZBSQ@1386|Bacillus	91061|Bacilli	E	Belongs to the aspartokinase family	dapG	GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,ACT_7
PHALIAPI_01734	224308.BSU16770	6.39e-201	557.0	COG0329@1|root,COG0329@2|Bacteria,1TPCK@1239|Firmicutes,4H9K9@91061|Bacilli,1ZBNR@1386|Bacillus	91061|Bacilli	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)	dapA	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
PHALIAPI_01735	224308.BSU16780	0.0	1066.0	COG0595@1|root,COG0595@2|Bacteria,1TQ9G@1239|Firmicutes,4HAAP@91061|Bacilli,1ZB4E@1386|Bacillus	91061|Bacilli	S	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay	rnjB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360	-	ko:K12574	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	Lactamase_B,RMMBL
PHALIAPI_01736	224308.BSU16790	5.01e-171	478.0	COG0740@1|root,COG0740@2|Bacteria,1TPX2@1239|Firmicutes,4H9XG@91061|Bacilli,1ZBH5@1386|Bacillus	91061|Bacilli	OU	COG0740 Protease subunit of ATP-dependent Clp proteases	tepA	-	-	-	-	-	-	-	-	-	-	-	CLP_protease
PHALIAPI_01737	224308.BSU16799	4.94e-44	142.0	2DR6C@1|root,33ACS@2|Bacteria,1VM75@1239|Firmicutes,4IKY5@91061|Bacilli,1ZIB2@1386|Bacillus	91061|Bacilli	S	YlzJ-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YlzJ
PHALIAPI_01738	224308.BSU16800	0.0	1436.0	COG1674@1|root,COG4980@1|root,COG1674@2|Bacteria,COG4980@2|Bacteria,1TPJR@1239|Firmicutes,4H9WA@91061|Bacilli,1ZANX@1386|Bacillus	91061|Bacilli	D	Belongs to the FtsK SpoIIIE SftA family	ftsK	GO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
PHALIAPI_01739	224308.BSU16810	1.28e-171	479.0	COG2188@1|root,COG2188@2|Bacteria,1TQQQ@1239|Firmicutes,4H9TG@91061|Bacilli,1ZB5M@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ymfC	-	-	ko:K03710	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
PHALIAPI_01740	224308.BSU16825	2.95e-265	729.0	COG0477@1|root,COG2814@2|Bacteria,1TQEW@1239|Firmicutes,4HASU@91061|Bacilli,1ZB5B@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	ymfD	-	-	ko:K08221	-	-	-	-	ko00000,ko02000	2.A.1.32	-	-	MFS_1,MFS_2,Sugar_tr
PHALIAPI_01741	224308.BSU16845	3.86e-298	814.0	COG0612@1|root,COG0612@2|Bacteria,1TPN6@1239|Firmicutes,4H9P5@91061|Bacilli,1ZCAJ@1386|Bacillus	91061|Bacilli	S	Peptidase M16	albE	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16_C
PHALIAPI_01742	224308.BSU16860	5.59e-308	839.0	COG0612@1|root,COG0612@2|Bacteria,1TP5I@1239|Firmicutes,4H9YG@91061|Bacilli,1ZBXQ@1386|Bacillus	91061|Bacilli	S	zinc protease	ymfH	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
PHALIAPI_01743	224308.BSU16870	3.01e-166	465.0	COG0300@1|root,COG0300@2|Bacteria,1V5EI@1239|Firmicutes,4ISWY@91061|Bacilli,1ZS7I@1386|Bacillus	91061|Bacilli	S	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis	ymfI	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
PHALIAPI_01744	224308.BSU16880	5.13e-55	171.0	2E5KP@1|root,330BT@2|Bacteria,1VGM7@1239|Firmicutes,4HNNX@91061|Bacilli,1ZHTB@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3243)	ymfJ	-	-	-	-	-	-	-	-	-	-	-	DUF3243
PHALIAPI_01745	1051501.AYTL01000027_gene1276	3.91e-183	510.0	28HGR@1|root,2Z7SI@2|Bacteria,1TRXV@1239|Firmicutes,4HA2I@91061|Bacilli,1ZAU1@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3388)	ymfK	-	-	-	-	-	-	-	-	-	-	-	DUF3388
PHALIAPI_01746	224308.BSU16910	3.05e-177	498.0	COG1426@1|root,COG1426@2|Bacteria,1V1N7@1239|Firmicutes,4HKW3@91061|Bacilli,1ZDC1@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ymfM	-	-	ko:K15539	-	-	-	-	ko00000	-	-	-	DUF4115,HTH_25
PHALIAPI_01747	224308.BSU16920	3.34e-132	375.0	COG0558@1|root,COG0558@2|Bacteria,1V6PJ@1239|Firmicutes,4HCEX@91061|Bacilli,1ZBJ2@1386|Bacillus	91061|Bacilli	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pgsA	GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576	2.7.8.5	ko:K00995	ko00564,ko01100,map00564,map01100	-	R01801	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS06365	CDP-OH_P_transf
PHALIAPI_01748	224308.BSU16930	3.71e-300	818.0	COG1058@1|root,COG1546@1|root,COG1058@2|Bacteria,COG1546@2|Bacteria,1TQ1N@1239|Firmicutes,4HATN@91061|Bacilli,1ZC5R@1386|Bacillus	91061|Bacilli	S	Belongs to the CinA family	cinA	-	3.5.1.42	ko:K03742,ko:K03743	ko00760,map00760	-	R02322	RC00100	ko00000,ko00001,ko01000	-	-	-	CinA,MoCF_biosynth
PHALIAPI_01749	224308.BSU16940	4.7e-239	658.0	COG0468@1|root,COG0468@2|Bacteria,1TPD5@1239|Firmicutes,4HAG5@91061|Bacilli,1ZCUX@1386|Bacillus	91061|Bacilli	L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	recA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496	-	ko:K03553	ko03440,map03440	M00729	-	-	ko00000,ko00001,ko00002,ko03400	-	-	-	RecA
PHALIAPI_01750	224308.BSU16950	5.45e-278	760.0	COG1680@1|root,COG1680@2|Bacteria,1V0GX@1239|Firmicutes,4HCXH@91061|Bacilli,1ZGWP@1386|Bacillus	91061|Bacilli	V	Beta-lactamase	pbpX	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,Cu_amine_oxidN1
PHALIAPI_01751	224308.BSU16960	4.25e-306	842.0	COG1418@1|root,COG1418@2|Bacteria,1TP48@1239|Firmicutes,4HC9J@91061|Bacilli,1ZBGP@1386|Bacillus	91061|Bacilli	S	Endoribonuclease that initiates mRNA decay	rny	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K18682	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DUF3552,HD,KH_1
PHALIAPI_01752	224308.BSU16970	6.18e-195	540.0	COG1692@1|root,COG1692@2|Bacteria,1TR9P@1239|Firmicutes,4HAV5@91061|Bacilli,1ZC3D@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ymdB	GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0016787,GO:0016788,GO:0042578	-	ko:K02029,ko:K02030,ko:K09769	-	M00236	-	-	ko00000,ko00002,ko02000	3.A.1.3	-	-	YmdB
PHALIAPI_01753	1051501.AYTL01000027_gene1285	2.44e-49	157.0	COG2359@1|root,COG2359@2|Bacteria,1V6G8@1239|Firmicutes,4HIQV@91061|Bacilli,1ZH05@1386|Bacillus	91061|Bacilli	S	Stage V sporulation protein S	spoVS	-	-	ko:K06416	-	-	-	-	ko00000	-	-	-	SpoVS
PHALIAPI_01754	224308.BSU16990	2.9e-253	694.0	COG1063@1|root,COG1063@2|Bacteria,1TS6I@1239|Firmicutes,4HD08@91061|Bacilli,1ZPZV@1386|Bacillus	91061|Bacilli	C	Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate	tdh	-	1.1.1.103	ko:K00060	ko00260,map00260	-	R01465	RC00525	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
PHALIAPI_01755	224308.BSU17000	2.68e-274	751.0	COG0156@1|root,COG0156@2|Bacteria,1TPUX@1239|Firmicutes,4HAH3@91061|Bacilli,1ZAUZ@1386|Bacillus	91061|Bacilli	H	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide	kbl	GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	2.3.1.29,2.3.1.47	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	M00123,M00573,M00577	R00371,R03210,R10124	RC00004,RC00039,RC00394,RC02725	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
PHALIAPI_01756	224308.BSU17010	0.0	1012.0	COG0621@1|root,COG0621@2|Bacteria,1TNYN@1239|Firmicutes,4HAAS@91061|Bacilli,1ZBMF@1386|Bacillus	91061|Bacilli	J	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	miaB	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360	2.8.4.3	ko:K06168	-	-	R10645,R10646,R10647	RC00003,RC00980,RC03221,RC03222	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,TRAM,UPF0004
PHALIAPI_01757	224308.BSU17020	1.27e-89	263.0	COG4550@1|root,COG4550@2|Bacteria,1V4W0@1239|Firmicutes,4HH6Y@91061|Bacilli,1ZG72@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0342 family	ymcA	-	3.6.3.21	ko:K02028	-	M00236	-	-	ko00000,ko00002,ko01000,ko02000	3.A.1.3	-	-	Com_YlbF
PHALIAPI_01758	1051501.AYTL01000027_gene1290	1.74e-119	342.0	2BYGR@1|root,2ZIKA@2|Bacteria,1V30V@1239|Firmicutes,4HFX6@91061|Bacilli,1ZE20@1386|Bacillus	91061|Bacilli	S	Spore coat protein	cotE	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K06328	-	-	-	-	ko00000	-	-	-	CotE
PHALIAPI_01759	224308.BSU17040	0.0	1657.0	COG0249@1|root,COG0249@2|Bacteria,1TPRJ@1239|Firmicutes,4HA63@91061|Bacilli,1ZB93@1386|Bacillus	91061|Bacilli	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	mutS	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
PHALIAPI_01760	224308.BSU17050	0.0	1197.0	COG0323@1|root,COG0323@2|Bacteria,1TPGK@1239|Firmicutes,4HB34@91061|Bacilli,1ZB9X@1386|Bacillus	91061|Bacilli	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
PHALIAPI_01761	224308.BSU17060	1.76e-87	259.0	2E08D@1|root,32VW3@2|Bacteria,1VBA4@1239|Firmicutes,4HKHV@91061|Bacilli,1ZIVG@1386|Bacillus	91061|Bacilli	S	Regulatory protein YrvL	-	-	-	-	-	-	-	-	-	-	-	-	YrvL
PHALIAPI_01762	224308.BSU17070	1.13e-126	360.0	28NRE@1|root,2ZBQP@2|Bacteria,1V2C0@1239|Firmicutes,4HGF6@91061|Bacilli,1ZFQD@1386|Bacillus	91061|Bacilli	S	Membrane	ymcC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01763	224308.BSU17080	8.43e-141	398.0	COG3226@1|root,COG3226@2|Bacteria,1V50H@1239|Firmicutes,4HJQ2@91061|Bacilli,1ZGDV@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	pksA	GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_C_6,TetR_N
PHALIAPI_01764	224308.BSU17090	1.57e-164	459.0	COG0491@1|root,COG0491@2|Bacteria,1V5TI@1239|Firmicutes,4HH95@91061|Bacilli	91061|Bacilli	S	Polyketide biosynthesis	pksB	-	3.1.2.6	ko:K01069	ko00620,map00620	-	R01736	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	Lactamase_B
PHALIAPI_01765	224308.BSU17100	1.2e-204	566.0	COG0331@1|root,COG0331@2|Bacteria,1TPB7@1239|Firmicutes,4HBCU@91061|Bacilli,1ZBGQ@1386|Bacillus	91061|Bacilli	I	malonyl CoA-acyl carrier protein transacylase	fabD	-	2.3.1.39	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	M00082	R01626,R11671	RC00004,RC00039,RC02727	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	-	-	-	Acyl_transf_1
PHALIAPI_01767	224308.BSU17110	2.5e-231	637.0	COG3321@1|root,COG3321@2|Bacteria,1TRPC@1239|Firmicutes,4HGJQ@91061|Bacilli,1ZIAR@1386|Bacillus	91061|Bacilli	Q	Acyl transferase domain	pksD	-	-	ko:K15328	-	-	-	-	ko00000,ko01008	-	-	-	Acyl_transf_1
PHALIAPI_01768	224308.BSU17120	0.0	1508.0	COG0331@1|root,COG2070@1|root,COG0331@2|Bacteria,COG2070@2|Bacteria,1TPB7@1239|Firmicutes,4HBCU@91061|Bacilli,1ZBGQ@1386|Bacillus	91061|Bacilli	I	malonyl CoA-acyl carrier protein transacylase	fabD	-	2.3.1.39	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	M00082	R01626,R11671	RC00004,RC00039,RC02727	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	-	-	-	Acyl_transf_1
PHALIAPI_01769	224308.BSU17130	5.46e-51	161.0	COG0236@1|root,COG0236@2|Bacteria,1VH6X@1239|Firmicutes,4HQ20@91061|Bacilli,1ZP8M@1386|Bacillus	91061|Bacilli	IQ	Phosphopantetheine attachment site	acpK	-	-	ko:K15337	-	-	-	-	ko00000,ko01008	-	-	-	PP-binding
PHALIAPI_01770	224308.BSU17140	8.8e-303	825.0	COG0304@1|root,COG0304@2|Bacteria,1TPA7@1239|Firmicutes,4H9SD@91061|Bacilli,1ZD02@1386|Bacillus	91061|Bacilli	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	-	-	2.3.1.179	ko:K00646,ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
PHALIAPI_01771	224308.BSU17150	1.13e-312	850.0	COG3425@1|root,COG3425@2|Bacteria,1TR4K@1239|Firmicutes,4HA67@91061|Bacilli,1ZE86@1386|Bacillus	91061|Bacilli	I	synthase	pksG	-	2.3.3.10	ko:K01641,ko:K15311	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	M00088,M00095	R01978	RC00004,RC00503	ko00000,ko00001,ko00002,ko01000,ko01008	-	-	-	HMG_CoA_synt_C,HMG_CoA_synt_N
PHALIAPI_01772	224308.BSU17160	1.61e-180	503.0	COG1024@1|root,COG1024@2|Bacteria,1TRCQ@1239|Firmicutes,4HDUU@91061|Bacilli,1ZARB@1386|Bacillus	91061|Bacilli	I	enoyl-CoA hydratase	-	-	-	ko:K15312	-	-	-	-	ko00000,ko01008	-	-	-	ECH_1
PHALIAPI_01773	224308.BSU17170	6.35e-176	490.0	COG1024@1|root,COG1024@2|Bacteria,1UY7Y@1239|Firmicutes,4HU35@91061|Bacilli	91061|Bacilli	I	Belongs to the enoyl-CoA hydratase isomerase family	pksI	GO:0003674,GO:0003824,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575	-	ko:K15313	-	-	-	-	ko00000,ko01008	-	-	-	ECH_1
PHALIAPI_01774	224308.BSU17180	0.0	9855.0	COG0300@1|root,COG0318@1|root,COG1020@1|root,COG1028@1|root,COG3321@1|root,COG0300@2|Bacteria,COG0318@2|Bacteria,COG1020@2|Bacteria,COG1028@2|Bacteria,COG3321@2|Bacteria,1TPTH@1239|Firmicutes,4HTBC@91061|Bacilli,1ZS7J@1386|Bacillus	91061|Bacilli	IQ	polyketide synthase	-	-	-	ko:K13611,ko:K13613,ko:K13614	-	-	-	-	ko00000,ko01004,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,KAsynt_C_assoc,KR,Ketoacyl-synt_C,PP-binding,PS-DH,ketoacyl-synt
PHALIAPI_01775	224308.BSU17190	0.0	8821.0	COG0236@1|root,COG0300@1|root,COG3321@1|root,COG4221@1|root,COG0236@2|Bacteria,COG0300@2|Bacteria,COG3321@2|Bacteria,COG4221@2|Bacteria,1VU8Z@1239|Firmicutes,4HV19@91061|Bacilli,1ZD1S@1386|Bacillus	91061|Bacilli	Q	Polyketide synthase of type I	-	-	-	ko:K13612	-	-	-	-	ko00000,ko01004,ko01008	-	-	-	AMP-binding,Acyl_transf_1,Condensation,KAsynt_C_assoc,KR,Ketoacyl-synt_C,NAD_binding_4,PP-binding,PS-DH,ketoacyl-synt
PHALIAPI_01776	224308.BSU17200	0.0	8339.0	COG0236@1|root,COG0451@1|root,COG1020@1|root,COG1028@1|root,COG3321@1|root,COG0236@2|Bacteria,COG0451@2|Bacteria,COG1020@2|Bacteria,COG1028@2|Bacteria,COG3321@2|Bacteria,1TPTH@1239|Firmicutes,4HTBC@91061|Bacilli,1ZS7J@1386|Bacillus	91061|Bacilli	IQ	polyketide synthase	-	-	-	ko:K13611,ko:K13613,ko:K13614	-	-	-	-	ko00000,ko01004,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,KAsynt_C_assoc,KR,Ketoacyl-synt_C,PP-binding,PS-DH,ketoacyl-synt
PHALIAPI_01777	224308.BSU17210	0.0	10686.0	COG1020@1|root,COG1028@1|root,COG3321@1|root,COG4221@1|root,COG1020@2|Bacteria,COG1028@2|Bacteria,COG3321@2|Bacteria,COG4221@2|Bacteria,1TPTH@1239|Firmicutes,4HTBC@91061|Bacilli,1ZS7J@1386|Bacillus	91061|Bacilli	IQ	polyketide synthase	-	-	-	ko:K13611,ko:K13613,ko:K13614	-	-	-	-	ko00000,ko01004,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,KAsynt_C_assoc,KR,Ketoacyl-synt_C,PP-binding,PS-DH,ketoacyl-synt
PHALIAPI_01778	224308.BSU17220	0.0	4965.0	COG0236@1|root,COG2227@1|root,COG3319@1|root,COG3321@1|root,COG0236@2|Bacteria,COG2227@2|Bacteria,COG3319@2|Bacteria,COG3321@2|Bacteria,1VRGS@1239|Firmicutes,4HV13@91061|Bacilli	91061|Bacilli	HQ	Beta-ketoacyl synthase	-	-	-	ko:K13615	-	-	-	-	ko00000,ko01004,ko01008	-	-	-	KAsynt_C_assoc,Ketoacyl-synt_C,Methyltransf_12,PP-binding,PS-DH,Thioesterase,ketoacyl-synt
PHALIAPI_01779	224308.BSU17230	3.96e-294	802.0	COG2124@1|root,COG2124@2|Bacteria,1TPWZ@1239|Firmicutes,4HAGS@91061|Bacilli,1ZC1Y@1386|Bacillus	91061|Bacilli	C	Cytochrome P450	cypA	GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005506,GO:0006066,GO:0006082,GO:0006629,GO:0006706,GO:0006707,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008395,GO:0009056,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016042,GO:0016053,GO:0016125,GO:0016127,GO:0016491,GO:0016705,GO:0016709,GO:0016713,GO:0017144,GO:0018130,GO:0019752,GO:0020037,GO:0032787,GO:0034641,GO:0036199,GO:0042364,GO:0042440,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0046148,GO:0046164,GO:0046394,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1902652	1.14.14.46,1.14.15.13	ko:K15468,ko:K16593,ko:K17474	ko00780,ko01100,map00780,map01100	M00573	R10123	-	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	-	-	-	p450
PHALIAPI_01780	224308.BSU17240	5.65e-81	239.0	2DRIZ@1|root,33BZG@2|Bacteria,1VMJW@1239|Firmicutes,4HR8I@91061|Bacilli,1ZJQF@1386|Bacillus	91061|Bacilli	-	-	ymzB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01781	224308.BSU17250	2.67e-207	572.0	COG0491@1|root,COG0491@2|Bacteria,1TSM4@1239|Firmicutes,4HBZ2@91061|Bacilli,1ZDRZ@1386|Bacillus	91061|Bacilli	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
PHALIAPI_01782	224308.BSU17260	0.0	884.0	COG1404@1|root,COG1404@2|Bacteria,1TQRU@1239|Firmicutes,4HAZA@91061|Bacilli,1ZAZK@1386|Bacillus	91061|Bacilli	O	Belongs to the peptidase S8 family	aprX	-	-	ko:K17734	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S8
PHALIAPI_01784	224308.BSU17270	3.96e-163	457.0	COG4195@1|root,COG4195@2|Bacteria,1VBQ5@1239|Firmicutes,4HK5Q@91061|Bacilli,1ZECB@1386|Bacillus	91061|Bacilli	S	Replication protein	ymaC	-	-	-	-	-	-	-	-	-	-	-	Gamma_PGA_hydro
PHALIAPI_01785	224308.BSU17280	1.71e-104	301.0	COG1764@1|root,COG1764@2|Bacteria,1V41Y@1239|Firmicutes,4HH9W@91061|Bacilli,1ZFXM@1386|Bacillus	91061|Bacilli	O	redox protein, regulator of disulfide bond formation	ymaD	-	-	-	-	-	-	-	-	-	-	-	OsmC
PHALIAPI_01786	224308.BSU17290	6.39e-73	219.0	COG2076@1|root,COG2076@2|Bacteria,1VEUF@1239|Firmicutes,4HNJX@91061|Bacilli,1ZHXE@1386|Bacillus	91061|Bacilli	P	COG2076 Membrane transporters of cations and cationic drugs	ebrB	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K03297,ko:K11814,ko:K11815	-	M00710	-	-	ko00000,ko00002,ko02000	2.A.7.1,2.A.7.1.6	-	-	Multi_Drug_Res
PHALIAPI_01787	224308.BSU17300	2.02e-66	202.0	COG2076@1|root,COG2076@2|Bacteria,1VEUF@1239|Firmicutes,4HM1T@91061|Bacilli,1ZHQQ@1386|Bacillus	91061|Bacilli	P	Small Multidrug Resistance protein	ebrA	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K11814	-	M00710	-	-	ko00000,ko00002,ko02000	2.A.7.1.6	-	-	Multi_Drug_Res
PHALIAPI_01789	224308.BSU17320	5.41e-76	228.0	2DXCY@1|root,344GQ@2|Bacteria,1VZDS@1239|Firmicutes,4HYN9@91061|Bacilli,1ZFZA@1386|Bacillus	91061|Bacilli	S	YmaF family	ymaF	-	-	-	-	-	-	-	-	-	-	-	YmaF
PHALIAPI_01790	224308.BSU17330	3.95e-223	615.0	COG0324@1|root,COG0324@2|Bacteria,1TPSC@1239|Firmicutes,4HAVW@91061|Bacilli,1ZBX9@1386|Bacillus	91061|Bacilli	J	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)	miaA	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.5.1.75	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	-	R01122	RC02820	ko00000,ko00001,ko01000,ko01006,ko03016	-	-	-	IPPT
PHALIAPI_01791	1051501.AYTL01000027_gene1306	1.28e-45	147.0	COG1923@1|root,COG1923@2|Bacteria,1VEGI@1239|Firmicutes,4HNN2@91061|Bacilli,1ZHYZ@1386|Bacillus	91061|Bacilli	J	RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs	hfq	-	-	ko:K03666	ko02024,ko03018,ko05111,map02024,map03018,map05111	-	-	-	ko00000,ko00001,ko03019,ko03036	-	-	-	Hfq
PHALIAPI_01792	326423.RBAM_017150	5.65e-30	108.0	29S7U@1|root,30DCB@2|Bacteria,1UB4T@1239|Firmicutes,4IMHD@91061|Bacilli,1ZK5R@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01793	1274524.BSONL12_21669	1.09e-30	110.0	2BK5Y@1|root,32EJN@2|Bacteria,1UAJ9@1239|Firmicutes,4IKXT@91061|Bacilli,1ZI93@1386|Bacillus	91061|Bacilli	-	-	ymzA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01794	224308.BSU17370	5.01e-66	201.0	COG1780@1|root,COG1780@2|Bacteria,1V9T1@1239|Firmicutes,4HJ0M@91061|Bacilli,1ZIDV@1386|Bacillus	91061|Bacilli	F	Probably involved in ribonucleotide reductase function	nrdI	GO:0000166,GO:0003674,GO:0005488,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010181,GO:0019538,GO:0032553,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564	-	ko:K03647	-	-	-	-	ko00000	-	-	-	Flavodoxin_NdrI
PHALIAPI_01795	224308.BSU17380	0.0	1386.0	COG0209@1|root,COG0209@2|Bacteria,1TPFH@1239|Firmicutes,4H9X0@91061|Bacilli,1ZANT@1386|Bacillus	91061|Bacilli	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdE	-	1.17.4.1	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	iYO844.BSU17380	RNR_N,Ribonuc_red_lgC,Ribonuc_red_lgN
PHALIAPI_01796	224308.BSU17390	1.65e-243	668.0	COG0208@1|root,COG0208@2|Bacteria,1TQTH@1239|Firmicutes,4H9WX@91061|Bacilli,1ZBBM@1386|Bacillus	91061|Bacilli	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdF	-	1.17.4.1	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	iSB619.SA_RS03915,iYO844.BSU17390	Ribonuc_red_sm
PHALIAPI_01797	224308.BSU17400	1.84e-140	397.0	COG4112@1|root,COG4112@2|Bacteria,1V7SZ@1239|Firmicutes,4IRNS@91061|Bacilli,1ZRW4@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
PHALIAPI_01798	224308.BSU17410	9.5e-149	422.0	COG0860@1|root,COG0860@2|Bacteria,1V3MD@1239|Firmicutes,4HHD1@91061|Bacilli,1ZBPF@1386|Bacillus	91061|Bacilli	M	n-acetylmuramoyl-L-alanine amidase	cwlC	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008745,GO:0016787,GO:0016810,GO:0016811,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0061783	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3,SPOR
PHALIAPI_01799	224308.BSU17420	2.29e-226	624.0	COG0464@1|root,COG0464@2|Bacteria,1TPQZ@1239|Firmicutes,4HCQK@91061|Bacilli,1ZBII@1386|Bacillus	91061|Bacilli	O	stage V sporulation protein K	spoVK	-	-	ko:K06413	-	-	-	-	ko00000	-	-	-	AAA
PHALIAPI_01800	224308.BSU17430	1.82e-293	802.0	COG2262@1|root,COG2262@2|Bacteria,1TNZB@1239|Firmicutes,4HACA@91061|Bacilli,1ZBT6@1386|Bacillus	91061|Bacilli	S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis	hflX	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043021,GO:0043022,GO:0044424,GO:0044464,GO:0044877	-	ko:K03665	-	-	-	-	ko00000,ko03009	-	-	-	GTP-bdg_M,GTP-bdg_N,MMR_HSR1
PHALIAPI_01801	224308.BSU17440	4.78e-310	844.0	COG4100@1|root,COG4100@2|Bacteria,1TQ88@1239|Firmicutes,4HAF5@91061|Bacilli,1ZAXI@1386|Bacillus	91061|Bacilli	P	COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance	ynbB	GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0016740,GO:0016765,GO:0016829,GO:0016846	-	-	-	-	-	-	-	-	-	-	Met_gamma_lyase
PHALIAPI_01802	224308.BSU17450	4.05e-89	261.0	COG0789@1|root,COG0789@2|Bacteria,1V6JE@1239|Firmicutes,4HKM6@91061|Bacilli,1ZH1F@1386|Bacillus	91061|Bacilli	K	transcriptional	glnR	GO:0003674,GO:0005488,GO:0005515,GO:0006082,GO:0006355,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016053,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031326,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903506,GO:2000112,GO:2001141	-	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00439	-	-	ko00000,ko00001,ko00002,ko02000,ko03000	3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	MerR_1
PHALIAPI_01803	224308.BSU17460	0.0	902.0	COG0174@1|root,COG0174@2|Bacteria,1TNZA@1239|Firmicutes,4HACE@91061|Bacilli,1ZBIQ@1386|Bacillus	91061|Bacilli	E	glutamine synthetase	glnA	GO:0003674,GO:0005488,GO:0005515,GO:0006082,GO:0006355,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008134,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009605,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016053,GO:0016597,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043392,GO:0043436,GO:0043562,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0045892,GO:0045934,GO:0046394,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051100,GO:0051101,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0061984,GO:0065007,GO:0065009,GO:0070406,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:0090295,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901698,GO:1901699,GO:1902679,GO:1903506,GO:1903507,GO:1904796,GO:1904797,GO:2000112,GO:2000113,GO:2000677,GO:2000678,GO:2001141	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	Gln-synt_C,Gln-synt_N
PHALIAPI_01804	1430331.EP10_16270	3.69e-32	115.0	2BWJU@1|root,340PU@2|Bacteria,1VWNB@1239|Firmicutes,4HX8G@91061|Bacilli,1WHM7@129337|Geobacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01805	1308866.J416_07492	4.16e-35	121.0	2DPGN@1|root,331ZK@2|Bacteria,1VGGX@1239|Firmicutes,4HQCE@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01807	66692.ABC3804	3.89e-67	219.0	COG3209@1|root,COG5444@1|root,COG3209@2|Bacteria,COG5444@2|Bacteria,1V54A@1239|Firmicutes,4HI4F@91061|Bacilli	91061|Bacilli	M	nuclease activity	-	-	-	-	-	-	-	-	-	-	-	-	EndoU_bacteria
PHALIAPI_01808	1051501.AYTL01000027_gene768	2.78e-260	725.0	COG5444@1|root,COG5444@2|Bacteria,1V674@1239|Firmicutes	1239|Firmicutes	M	nucleic acid phosphodiester bond hydrolysis	-	-	-	-	-	-	-	-	-	-	-	-	EndoU_bacteria,Endonuclea_NS_2,LXG
PHALIAPI_01810	586416.GZ22_07760	6.13e-14	68.9	2E5DI@1|root,3305I@2|Bacteria,1VJBB@1239|Firmicutes,4HQRW@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01812	224308.BSU21600	1.11e-158	456.0	2AKQD@1|root,31BH4@2|Bacteria,1UCTS@1239|Firmicutes,4IP9Z@91061|Bacilli,1ZPKS@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01813	224308.BSU17490	1.62e-48	155.0	2E8AN@1|root,332PH@2|Bacteria,1VGVR@1239|Firmicutes,4HNM2@91061|Bacilli,1ZJ76@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	bPH_5
PHALIAPI_01814	1274524.BSONL12_21604	1.56e-120	344.0	COG4282@1|root,COG4282@2|Bacteria,1VDP8@1239|Firmicutes,4IIQ1@91061|Bacilli,1ZIZY@1386|Bacillus	91061|Bacilli	G	SMI1-KNR4 cell-wall	-	-	-	-	-	-	-	-	-	-	-	-	SMI1_KNR4,SUKH_6
PHALIAPI_01815	224308.BSU17510	3.58e-120	347.0	28RYR@1|root,333ED@2|Bacteria,1VRTX@1239|Firmicutes,4HTN7@91061|Bacilli	91061|Bacilli	-	-	ynaC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01816	224308.BSU17520	3.38e-125	356.0	COG1670@1|root,COG1670@2|Bacteria,1V5D0@1239|Firmicutes,4HFTD@91061|Bacilli,1ZFVB@1386|Bacillus	91061|Bacilli	J	Acetyltransferase (GNAT) domain	ynaD	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
PHALIAPI_01817	1501230.ET33_35185	1.61e-93	285.0	COG1266@1|root,COG1266@2|Bacteria,1UMYH@1239|Firmicutes,4IU3B@91061|Bacilli,277HQ@186822|Paenibacillaceae	91061|Bacilli	S	CAAX protease self-immunity	-	-	-	-	-	-	-	-	-	-	-	-	Abi
PHALIAPI_01818	326423.RBAM_034140	8.48e-12	65.1	2B1TR@1|root,31U9Q@2|Bacteria,1UCW8@1239|Firmicutes,4IPC8@91061|Bacilli,1ZPPX@1386|Bacillus	91061|Bacilli	S	Uncharacterised protein family (UPF0715)	ywlA	-	-	-	-	-	-	-	-	-	-	-	UPF0715
PHALIAPI_01819	224308.BSU20950	6.57e-29	105.0	COG3655@1|root,COG3655@2|Bacteria,1VJKD@1239|Firmicutes,4I010@91061|Bacilli	91061|Bacilli	K	Cro/C1-type HTH DNA-binding domain	-	-	-	ko:K07727	-	-	-	-	ko00000,ko03000	-	-	-	HTH_26
PHALIAPI_01820	224308.BSU17530	2.14e-147	415.0	2CHEV@1|root,2ZC9V@2|Bacteria,1V1ZK@1239|Firmicutes,4HGJX@91061|Bacilli,1ZE3N@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF3885)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3885
PHALIAPI_01821	1051501.AYTL01000028_gene2068	3.88e-05	47.0	2B1TR@1|root,31U9Q@2|Bacteria,1UCW8@1239|Firmicutes,4IPC8@91061|Bacilli,1ZPPX@1386|Bacillus	91061|Bacilli	S	Uncharacterised protein family (UPF0715)	ywlA	-	-	-	-	-	-	-	-	-	-	-	UPF0715
PHALIAPI_01823	224308.BSU17570	0.0	887.0	COG2211@1|root,COG2211@2|Bacteria,1TRA5@1239|Firmicutes,4HENT@91061|Bacilli,1ZR5N@1386|Bacillus	91061|Bacilli	G	MFS/sugar transport protein	xynP	-	-	ko:K03292	-	-	-	-	ko00000	2.A.2	-	-	MFS_2
PHALIAPI_01824	224308.BSU17580	0.0	1130.0	COG3507@1|root,COG3507@2|Bacteria,1TP5K@1239|Firmicutes,4HA16@91061|Bacilli,1ZCCV@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 43 family	xynB	-	3.2.1.37	ko:K01198	ko00520,ko01100,map00520,map01100	-	R01433	RC00467	ko00000,ko00001,ko01000	-	GH43	-	DUF1349,Glyco_hydro_43
PHALIAPI_01825	224308.BSU17590	2.48e-275	753.0	COG1940@1|root,COG1940@2|Bacteria,1TQCE@1239|Firmicutes,4HDE3@91061|Bacilli,1ZC4Y@1386|Bacillus	91061|Bacilli	GK	ROK family	xylR	-	-	-	-	-	-	-	-	-	-	-	HTH_24,ROK
PHALIAPI_01826	224308.BSU17600	0.0	905.0	COG2115@1|root,COG2115@2|Bacteria,1TQW2@1239|Firmicutes,4H9WG@91061|Bacilli,1ZE2B@1386|Bacillus	91061|Bacilli	G	Belongs to the xylose isomerase family	xylA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046365,GO:0071704,GO:1901575	5.3.1.5	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	-	R00878,R01432	RC00376,RC00516	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
PHALIAPI_01827	224308.BSU17610	0.0	996.0	COG1070@1|root,COG1070@2|Bacteria,1TQ1I@1239|Firmicutes,4HBRJ@91061|Bacilli,1ZBEJ@1386|Bacillus	91061|Bacilli	G	xylulose kinase	xylB	-	2.7.1.17	ko:K00854	ko00040,ko01100,map00040,map01100	M00014	R01639	RC00002,RC00538	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU17610	FGGY_C,FGGY_N
PHALIAPI_01828	224308.BSU17620	1.24e-145	410.0	COG1525@1|root,COG1525@2|Bacteria,1V46V@1239|Firmicutes,4HHJ1@91061|Bacilli,1ZQ6S@1386|Bacillus	91061|Bacilli	L	RNA catabolic process	yokF	GO:0003674,GO:0003824,GO:0004518,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901361,GO:1901575	3.1.31.1	ko:K01174	-	-	-	-	ko00000,ko01000	-	-	-	Excalibur,SNase
PHALIAPI_01829	224308.BSU17630	0.0	882.0	COG0477@1|root,COG2814@2|Bacteria,1TREV@1239|Firmicutes,4HAN1@91061|Bacilli,1ZAUM@1386|Bacillus	91061|Bacilli	U	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	-	GO:0003674,GO:0005215,GO:0005351,GO:0005402,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034219,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600	-	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	-	-	-	ko00000,ko00001,ko02000	2.A.1.1,2.A.1.1.2,2.A.1.1.26	-	-	Sugar_tr
PHALIAPI_01830	224308.BSU17640	2.8e-277	759.0	COG0787@1|root,COG0787@2|Bacteria,1TNYY@1239|Firmicutes,4HA95@91061|Bacilli,1ZCW9@1386|Bacillus	91061|Bacilli	E	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids	alr	-	5.1.1.1	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	-	R00401	RC00285	ko00000,ko00001,ko01000,ko01011	-	-	-	Ala_racemase_C,Ala_racemase_N
PHALIAPI_01831	224308.BSU17650	9.11e-106	305.0	2CEK2@1|root,32S02@2|Bacteria,1VCYR@1239|Firmicutes,4HXMN@91061|Bacilli,1ZR51@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2691)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2691
PHALIAPI_01832	224308.BSU17660	3.01e-102	295.0	COG0756@1|root,COG0756@2|Bacteria,1V5PP@1239|Firmicutes,4HHFX@91061|Bacilli,1ZGRC@1386|Bacillus	91061|Bacilli	F	Deoxyuridine 5'-triphosphate	yncF	GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576	3.6.1.23	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	M00053	R02100,R11896	RC00002	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	iYO844.BSU17660	dUTPase
PHALIAPI_01835	224308.BSU17680	5.55e-210	579.0	COG0207@1|root,COG0207@2|Bacteria,1TSIR@1239|Firmicutes,4H9QS@91061|Bacilli,1ZM6D@1386|Bacillus	91061|Bacilli	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	thyA	-	2.1.1.45	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	M00053	R02101	RC00219,RC00332	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylat_synt
PHALIAPI_01836	1121090.KB894688_gene1624	5.12e-252	700.0	COG3039@1|root,COG3039@2|Bacteria,1TPFS@1239|Firmicutes,4H9V9@91061|Bacilli,1ZDIP@1386|Bacillus	91061|Bacilli	L	COG3666 Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1,DDE_Tnp_1_6,DUF772
PHALIAPI_01838	224308.BSU17690	1.33e-161	454.0	2CQ69@1|root,32SKI@2|Bacteria,1VCJR@1239|Firmicutes,4HNF9@91061|Bacilli,1ZFBY@1386|Bacillus	91061|Bacilli	S	Domain of unknown function, YrpD	-	-	-	-	-	-	-	-	-	-	-	-	YrpD
PHALIAPI_01841	224308.BSU17710	2.37e-34	117.0	COG1826@1|root,COG1826@2|Bacteria	2|Bacteria	U	protein secretion	tatA	-	-	ko:K03116,ko:K03117,ko:K03646	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02000,ko02044	2.A.64,2.C.1.2	-	-	MttA_Hcf106
PHALIAPI_01842	224308.BSU17720	1.04e-94	275.0	2BAHV@1|root,323YG@2|Bacteria,1U0CE@1239|Firmicutes,4I9P8@91061|Bacilli,1ZKHR@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01843	224308.BSU17730	3.01e-102	295.0	COG3832@1|root,COG3832@2|Bacteria,1V7US@1239|Firmicutes,4HK0E@91061|Bacilli,1ZGHK@1386|Bacillus	91061|Bacilli	S	Activator of Hsp90 ATPase homolog 1-like protein	yndB	-	-	-	-	-	-	-	-	-	-	-	AHSA1
PHALIAPI_01846	224308.BSU17750	0.0	979.0	COG0697@1|root,COG0697@2|Bacteria,1TP7K@1239|Firmicutes,4HAH1@91061|Bacilli,1ZBEF@1386|Bacillus	91061|Bacilli	EG	Spore germination protein	yndD1	-	-	ko:K06288,ko:K06291,ko:K06310	-	-	-	-	ko00000	-	-	-	GerA
PHALIAPI_01847	224308.BSU17760	1.87e-248	683.0	COG0531@1|root,COG0531@2|Bacteria,1TZQ6@1239|Firmicutes,4ISWZ@91061|Bacilli,1ZS7K@1386|Bacillus	91061|Bacilli	U	Spore germination	yndE7	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039	-	ko:K06311	-	-	-	-	ko00000,ko02000	2.A.3.9.4	-	-	Spore_permease
PHALIAPI_01848	224308.BSU17770	2.78e-273	749.0	28IEM@1|root,2Z8GN@2|Bacteria,1UB3Y@1239|Firmicutes,4HV0B@91061|Bacilli,1ZRWJ@1386|Bacillus	91061|Bacilli	S	Spore germination protein	-	-	-	ko:K06293,ko:K06312	-	-	-	-	ko00000	-	-	-	Spore_GerAC
PHALIAPI_01849	224308.BSU17780	1.99e-193	536.0	29RNN@1|root,30CRY@2|Bacteria,1UP6P@1239|Firmicutes,4HBII@91061|Bacilli,1ZF3C@1386|Bacillus	91061|Bacilli	S	DoxX-like family	yndG	-	-	-	-	-	-	-	-	-	-	-	DoxX_3
PHALIAPI_01850	224308.BSU17790	1.65e-147	415.0	arCOG11972@1|root,2ZG4P@2|Bacteria,1V2DB@1239|Firmicutes,4HGUW@91061|Bacilli,1ZGP4@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF4166)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4166
PHALIAPI_01851	224308.BSU17800	0.0	1060.0	28KUD@1|root,2ZAB6@2|Bacteria,1TRII@1239|Firmicutes,4HA8V@91061|Bacilli,1ZCE4@1386|Bacillus	91061|Bacilli	S	YndJ-like protein	yndJ	-	-	-	-	-	-	-	-	-	-	-	YndJ
PHALIAPI_01853	224308.BSU17820	1.61e-175	489.0	COG4195@1|root,COG4195@2|Bacteria,1VBQ5@1239|Firmicutes,4HK5Q@91061|Bacilli,1ZECB@1386|Bacillus	91061|Bacilli	S	Replication protein	yndL	-	-	-	-	-	-	-	-	-	-	-	Gamma_PGA_hydro
PHALIAPI_01854	224308.BSU17830	3.79e-96	281.0	2E4BW@1|root,32Z7G@2|Bacteria,1VH0F@1239|Firmicutes,4HPQD@91061|Bacilli,1ZINT@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2512)	yndM	-	-	-	-	-	-	-	-	-	-	-	DUF2512
PHALIAPI_01855	224308.BSU17840	1.49e-102	296.0	COG0346@1|root,COG0346@2|Bacteria,1V422@1239|Firmicutes,4HH25@91061|Bacilli,1ZG9A@1386|Bacillus	91061|Bacilli	H	Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor	fosB	GO:0003674,GO:0003824,GO:0004364,GO:0008150,GO:0016740,GO:0016765,GO:0042221,GO:0046677,GO:0050896	-	ko:K11210,ko:K21252	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Glyoxalase
PHALIAPI_01856	224308.BSU17850	7.22e-142	400.0	COG1974@1|root,COG1974@2|Bacteria,1TQ3H@1239|Firmicutes,4HBHA@91061|Bacilli,1ZBMU@1386|Bacillus	91061|Bacilli	K	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	lexA	GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141	3.4.21.88	ko:K01356	-	M00729	-	-	ko00000,ko00002,ko01000,ko01002,ko03400	-	-	-	LexA_DNA_bind,Peptidase_S24
PHALIAPI_01857	224308.BSU17860	8.5e-65	197.0	COG1388@1|root,COG1388@2|Bacteria,1VK5T@1239|Firmicutes,4HRE2@91061|Bacilli,1ZH8B@1386|Bacillus	91061|Bacilli	D	Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery	yneA	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	-	-	-	-	-	-	-	-	-	-	LysM
PHALIAPI_01858	224308.BSU17870	3.8e-143	405.0	COG1961@1|root,COG1961@2|Bacteria,1TR74@1239|Firmicutes,4HBJI@91061|Bacilli,1ZCET@1386|Bacillus	91061|Bacilli	L	resolvase	yneB	GO:0000150,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140097,GO:1901360	-	-	-	-	-	-	-	-	-	-	Resolvase
PHALIAPI_01859	224308.BSU17880	1.15e-43	142.0	COG4224@1|root,COG4224@2|Bacteria,1VEKJ@1239|Firmicutes,4HNIB@91061|Bacilli,1ZIU8@1386|Bacillus	91061|Bacilli	S	UPF0291 protein	ynzC	-	-	-	-	-	-	-	-	-	-	-	DUF896
PHALIAPI_01860	224308.BSU17890	0.0	1311.0	COG0021@1|root,COG0021@2|Bacteria,1TPIB@1239|Firmicutes,4HADA@91061|Bacilli,1ZBQ6@1386|Bacillus	91061|Bacilli	G	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate	tkt	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
PHALIAPI_01861	224308.BSU17900	3.09e-106	306.0	2EUDS@1|root,33MW4@2|Bacteria,1VHIA@1239|Firmicutes,4HSFG@91061|Bacilli,1ZEP8@1386|Bacillus	91061|Bacilli	S	Sporulation inhibitor of replication protein sirA	yneE	-	-	-	-	-	-	-	-	-	-	-	SirA
PHALIAPI_01862	1051501.AYTL01000033_gene259	4.36e-39	130.0	COG3763@1|root,COG3763@2|Bacteria,1VEJC@1239|Firmicutes,4HNN9@91061|Bacilli,1ZHYQ@1386|Bacillus	91061|Bacilli	S	UPF0154 protein	yneF	-	-	ko:K09976	-	-	-	-	ko00000	-	-	-	UPF0154
PHALIAPI_01863	224308.BSU17930	1.18e-164	461.0	COG0785@1|root,COG0785@2|Bacteria,1TQH1@1239|Firmicutes,4H9UJ@91061|Bacilli,1ZBPX@1386|Bacillus	91061|Bacilli	O	cytochrome c biogenesis protein	ccdA	-	-	ko:K06196	-	-	-	-	ko00000,ko02000	5.A.1.2	-	-	DsbD
PHALIAPI_01864	224308.BSU17940	7.38e-78	232.0	COG2201@1|root,COG2201@2|Bacteria,1V3IU@1239|Firmicutes,4ISX0@91061|Bacilli,1ZRES@1386|Bacillus	91061|Bacilli	T	cheY-homologous receiver domain	ccdB	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
PHALIAPI_01865	224308.BSU17950	3.57e-98	286.0	COG4846@1|root,COG4846@2|Bacteria,1V7C6@1239|Firmicutes,4HGXI@91061|Bacilli,1ZG68@1386|Bacillus	91061|Bacilli	O	COG4846 Membrane protein involved in cytochrome C biogenesis	yneJ	-	-	-	-	-	-	-	-	-	-	-	DUF1453
PHALIAPI_01866	224308.BSU17960	2.3e-96	280.0	291YW@1|root,2ZPID@2|Bacteria,1V3V6@1239|Firmicutes,4HGYJ@91061|Bacilli,1ZG6E@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2621)	yneK	-	-	-	-	-	-	-	-	-	-	-	DUF2621
PHALIAPI_01867	224308.BSU17970	2.35e-84	249.0	COG0071@1|root,COG0071@2|Bacteria,1UB14@1239|Firmicutes,4IME0@91061|Bacilli,1ZJX9@1386|Bacillus	91061|Bacilli	O	Spore coat protein	cotM	-	-	ko:K06335	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_01868	224308.BSU17980	5.65e-27	98.2	2E54C@1|root,32ZXB@2|Bacteria,1VJFQ@1239|Firmicutes,4HQN1@91061|Bacilli,1ZK01@1386|Bacillus	91061|Bacilli	S	Belongs to the SspP family	sspP	-	-	ko:K06433	-	-	-	-	ko00000	-	-	-	SspP
PHALIAPI_01869	1178537.BA1_08761	3.27e-21	84.0	2EI8E@1|root,33BZS@2|Bacteria,1VNNB@1239|Firmicutes,4HS1A@91061|Bacilli,1ZIU1@1386|Bacillus	91061|Bacilli	S	Belongs to the SspO family	sspO	-	-	ko:K06432	-	-	-	-	ko00000	-	-	-	SspO
PHALIAPI_01870	224308.BSU18000	0.0	1808.0	COG1048@1|root,COG1048@2|Bacteria,1VTMM@1239|Firmicutes,4HB5N@91061|Bacilli,1ZART@1386|Bacillus	91061|Bacilli	C	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate	citB	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0050789,GO:0050793,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0065007,GO:0071704,GO:0072350,GO:0097159,GO:1901363	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS06730	Aconitase,Aconitase_C
PHALIAPI_01871	224308.BSU18010	8.82e-119	339.0	COG0526@1|root,COG0526@2|Bacteria,1VAPY@1239|Firmicutes,4HJN1@91061|Bacilli,1ZG2C@1386|Bacillus	91061|Bacilli	CO	alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	yneN	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
PHALIAPI_01872	1178537.BA1_08746	9.26e-10	54.3	29SCZ@1|root,30DHM@2|Bacteria,1UBAQ@1239|Firmicutes,4IMPJ@91061|Bacilli,1ZKJ9@1386|Bacillus	91061|Bacilli	S	Fur-regulated basic protein B	-	-	-	-	-	-	-	-	-	-	-	-	Fur_reg_FbpB
PHALIAPI_01874	224308.BSU18030	6.62e-48	153.0	2E62M@1|root,330RR@2|Bacteria,1VF8M@1239|Firmicutes,4HPWY@91061|Bacilli,1ZITR@1386|Bacillus	91061|Bacilli	S	Belongs to the Tlp family	tlp	-	-	ko:K06434	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_01875	1051501.AYTL01000033_gene272	5.7e-95	276.0	COG0824@1|root,COG0824@2|Bacteria,1VAGM@1239|Firmicutes,4HIVC@91061|Bacilli,1ZQR3@1386|Bacillus	91061|Bacilli	S	Thioesterase-like superfamily	yneP	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
PHALIAPI_01876	224308.BSU18050	6.65e-71	213.0	2CICC@1|root,32S7S@2|Bacteria,1VC46@1239|Firmicutes,4HKPJ@91061|Bacilli,1ZI00@1386|Bacillus	91061|Bacilli	-	-	yneQ	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01877	224308.BSU18060	8.97e-65	197.0	COG4841@1|root,COG4841@2|Bacteria,1VEQE@1239|Firmicutes,4HNU2@91061|Bacilli,1ZHU4@1386|Bacillus	91061|Bacilli	S	Belongs to the HesB IscA family	yneR	-	-	-	-	-	-	-	-	-	-	-	Fe-S_biosyn
PHALIAPI_01878	224308.BSU18070	5.48e-122	349.0	COG0344@1|root,COG0344@2|Bacteria,1VA3J@1239|Firmicutes,4HC55@91061|Bacilli,1ZFP9@1386|Bacillus	91061|Bacilli	I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP	plsY	-	2.3.1.15	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	G3P_acyltransf
PHALIAPI_01879	224308.BSU18080	1.21e-90	265.0	COG1832@1|root,COG1832@2|Bacteria,1V7C7@1239|Firmicutes,4HIZT@91061|Bacilli,1ZG6W@1386|Bacillus	91061|Bacilli	S	CoA-binding protein	yneT	-	-	ko:K06929	-	-	-	-	ko00000	-	-	-	CoA_binding_2
PHALIAPI_01880	224308.BSU18090	0.0	1268.0	COG0187@1|root,COG0187@2|Bacteria,1TQCF@1239|Firmicutes,4H9UC@91061|Bacilli,1ZBMM@1386|Bacillus	91061|Bacilli	L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule	parE	GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360	-	ko:K02622	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
PHALIAPI_01881	224308.BSU18100	0.0	1575.0	COG0188@1|root,COG0188@2|Bacteria,1TRE7@1239|Firmicutes,4HAQB@91061|Bacilli,1ZBCI@1386|Bacillus	91061|Bacilli	L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule	parC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K02621	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
PHALIAPI_01882	326423.RBAM_017920	1.82e-18	76.3	29SDG@1|root,30DI8@2|Bacteria,1UBB9@1239|Firmicutes,4IMQ6@91061|Bacilli,1ZKKQ@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01883	224308.BSU18110	1.06e-75	227.0	29KWY@1|root,307UE@2|Bacteria,1U284@1239|Firmicutes,4IBSD@91061|Bacilli,1ZHFJ@1386|Bacillus	91061|Bacilli	-	-	ynfC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01884	224308.BSU18120	0.0	870.0	COG1115@1|root,COG1115@2|Bacteria,1TNZP@1239|Firmicutes,4H9SZ@91061|Bacilli,1ZAX7@1386|Bacillus	91061|Bacilli	E	Sodium alanine symporter	alsT	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03310,ko:K11626	ko02020,map02020	-	-	-	ko00000,ko00001	2.A.25	-	-	Na_Ala_symp
PHALIAPI_01885	224308.BSU18130	0.0	1014.0	COG2730@1|root,COG2730@2|Bacteria,1TSJQ@1239|Firmicutes,4HFEH@91061|Bacilli,1ZEYQ@1386|Bacillus	91061|Bacilli	G	PFAM glycoside hydrolase family 5	bglC5	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CBM_3,Cellulase
PHALIAPI_01887	279010.BL01467	7.91e-269	736.0	COG4188@1|root,COG4188@2|Bacteria,1VS5S@1239|Firmicutes,4HUVW@91061|Bacilli,1ZRUV@1386|Bacillus	91061|Bacilli	S	Platelet-activating factor acetylhydrolase, isoform II	-	-	-	-	-	-	-	-	-	-	-	-	PAF-AH_p_II
PHALIAPI_01888	224308.BSU18150	1.18e-315	858.0	COG5520@1|root,COG5520@2|Bacteria,1U8RG@1239|Firmicutes,4HS8Y@91061|Bacilli	91061|Bacilli	M	Belongs to the glycosyl hydrolase 30 family	ynfF	GO:0003674,GO:0003824,GO:0016787	3.2.1.136	ko:K15924	-	-	-	-	ko00000,ko01000	-	GH5	-	CBM_6,Glyco_hydro_30,Glyco_hydro_30C
PHALIAPI_01889	224308.BSU18160	0.0	1011.0	COG3507@1|root,COG3507@2|Bacteria,1TSKZ@1239|Firmicutes,4HTDV@91061|Bacilli,1ZATA@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 43 family	xynD	GO:0005575,GO:0005576	3.2.1.55	ko:K15921	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	CBM6,GH43	-	CBM_6,Glyco_hydro_43
PHALIAPI_01890	224308.BSU18170	2.09e-104	301.0	COG2246@1|root,COG2246@2|Bacteria,1VCBC@1239|Firmicutes,4HM7K@91061|Bacilli,1ZRYB@1386|Bacillus	91061|Bacilli	S	membrane	yngA	-	-	-	-	-	-	-	-	-	-	-	GtrA
PHALIAPI_01891	224308.BSU18180	4.35e-207	573.0	COG1210@1|root,COG1210@2|Bacteria,1TQ24@1239|Firmicutes,4HATY@91061|Bacilli,1ZASX@1386|Bacillus	91061|Bacilli	M	UTP-glucose-1-phosphate uridylyltransferase	yngB	-	2.7.7.9	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	M00129,M00361,M00362,M00549	R00289	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
PHALIAPI_01892	224308.BSU18190	2.01e-134	381.0	COG0586@1|root,COG0586@2|Bacteria,1V1D4@1239|Firmicutes,4HFSU@91061|Bacilli,1ZCPB@1386|Bacillus	91061|Bacilli	S	membrane-associated protein	yngC	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
PHALIAPI_01893	224308.BSU18200	3.01e-295	805.0	COG2404@1|root,COG2404@2|Bacteria,1TQPZ@1239|Firmicutes,4HCSM@91061|Bacilli,1ZCH8@1386|Bacillus	91061|Bacilli	S	phosphohydrolase (DHH superfamily)	yngD	-	-	ko:K07097	-	-	-	-	ko00000	-	-	-	DHHA1
PHALIAPI_01894	224308.BSU18210	0.0	990.0	COG4799@1|root,COG4799@2|Bacteria,1TQCV@1239|Firmicutes,4HBK9@91061|Bacilli,1ZBHM@1386|Bacillus	91061|Bacilli	I	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)	yngE	-	-	-	-	-	-	-	-	-	-	iYO844.BSU18210	Carboxyl_trans
PHALIAPI_01895	224308.BSU18220	9.58e-172	481.0	COG1024@1|root,COG1024@2|Bacteria,1TQ89@1239|Firmicutes,4HCH3@91061|Bacilli,1ZAXG@1386|Bacillus	91061|Bacilli	I	Belongs to the enoyl-CoA hydratase isomerase family	yngF	GO:0003674,GO:0003824,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575	-	-	-	-	-	-	-	-	-	-	ECH_1
PHALIAPI_01896	224308.BSU18230	3.34e-212	586.0	COG0119@1|root,COG0119@2|Bacteria,1TQG3@1239|Firmicutes,4HA1U@91061|Bacilli,1ZC18@1386|Bacillus	91061|Bacilli	E	Hydroxymethylglutaryl-CoA lyase	yngG	GO:0003674,GO:0003824,GO:0004419,GO:0005488,GO:0016829,GO:0016830,GO:0016833,GO:0043167,GO:0043169,GO:0046872	4.1.3.4	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	M00036,M00088	R01360,R08090	RC00502,RC00503,RC01118,RC01946	ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like
PHALIAPI_01897	224308.BSU18239	8.37e-42	137.0	COG0511@1|root,COG0511@2|Bacteria,1UI6N@1239|Firmicutes,4ISFM@91061|Bacilli,1ZIUY@1386|Bacillus	91061|Bacilli	I	Biotin carboxyl carrier protein	-	-	-	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742	RC00040,RC00367	ko00000,ko00001,ko00002	-	-	-	Biotin_lipoyl
PHALIAPI_01898	224308.BSU18240	0.0	866.0	COG0439@1|root,COG0439@2|Bacteria,1TP16@1239|Firmicutes,4HA40@91061|Bacilli,1ZBTG@1386|Bacillus	91061|Bacilli	I	Biotin carboxylase	yngH	-	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
PHALIAPI_01899	224308.BSU18250	0.0	1095.0	COG0318@1|root,COG0318@2|Bacteria,1TPSX@1239|Firmicutes,4HAHB@91061|Bacilli,1ZPZR@1386|Bacillus	91061|Bacilli	IQ	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II	yngI	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
PHALIAPI_01900	224308.BSU18260	7.28e-266	729.0	COG1960@1|root,COG1960@2|Bacteria,1TP57@1239|Firmicutes,4HAWZ@91061|Bacilli,1ZCGC@1386|Bacillus	91061|Bacilli	I	acyl-CoA dehydrogenase	yngJ	-	1.3.8.1	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	-	R01175,R01178,R02661,R03172,R04751	RC00052,RC00068,RC00076,RC00120,RC00148	ko00000,ko00001,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
PHALIAPI_01901	1274524.BSONL12_00627	1.06e-36	127.0	2E1TX@1|root,32X3M@2|Bacteria,1VCTQ@1239|Firmicutes,4HNDY@91061|Bacilli,1ZJF8@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5367)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5367
PHALIAPI_01902	224308.BSU18280	0.0	1046.0	COG1649@1|root,COG1649@2|Bacteria,1TRTG@1239|Firmicutes,4HD0M@91061|Bacilli,1ZC0H@1386|Bacillus	91061|Bacilli	T	Glycosyl hydrolase-like 10	yngK	-	-	-	-	-	-	-	-	-	-	-	Big_2,Cu_amine_oxidN1,GHL10
PHALIAPI_01903	224308.BSU18290	1.68e-81	242.0	2CDF4@1|root,32RXN@2|Bacteria,1VACE@1239|Firmicutes,4HQ6D@91061|Bacilli,1ZGTF@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1360)	yngL	-	-	-	-	-	-	-	-	-	-	-	DUF1360
PHALIAPI_01904	224308.BSU18300	0.0	2493.0	COG1020@1|root,COG3319@1|root,COG1020@2|Bacteria,COG3319@2|Bacteria	2|Bacteria	Q	amino acid activation for nonribosomal peptide biosynthetic process	-	-	6.3.2.14	ko:K02364,ko:K15656,ko:K15668	ko01053,ko01054,ko01110,ko01130,ko02024,map01053,map01054,map01110,map01130,map02024	-	R07644	RC00162,RC03046	ko00000,ko00001,ko01000,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,KR,PP-binding,Thioesterase
PHALIAPI_01905	224308.BSU18310	0.0	7012.0	COG1020@1|root,COG1020@2|Bacteria,1TPTH@1239|Firmicutes,4HAHU@91061|Bacilli,1ZB3S@1386|Bacillus	91061|Bacilli	Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	-	-	-	ko:K15664,ko:K15666,ko:K15667	ko01054,map01054	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding
PHALIAPI_01906	224308.BSU18320	0.0	4300.0	COG1020@1|root,COG1020@2|Bacteria,1TPTH@1239|Firmicutes,4HAHU@91061|Bacilli,1ZB3S@1386|Bacillus	91061|Bacilli	Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	-	-	-	ko:K15664,ko:K15666,ko:K15667	ko01054,map01054	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding
PHALIAPI_01907	224308.BSU18320	7.36e-200	613.0	COG1020@1|root,COG1020@2|Bacteria,1TPTH@1239|Firmicutes,4HAHU@91061|Bacilli,1ZB3S@1386|Bacillus	91061|Bacilli	Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	-	-	-	ko:K15664,ko:K15666,ko:K15667	ko01054,map01054	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding
PHALIAPI_01908	224308.BSU18330	0.0	4974.0	COG1020@1|root,COG1020@2|Bacteria,1TPTH@1239|Firmicutes,4HAHU@91061|Bacilli,1ZB3S@1386|Bacillus	91061|Bacilli	Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	-	-	-	ko:K15665	ko01054,map01054	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding
PHALIAPI_01909	224308.BSU18340	0.0	4977.0	COG1020@1|root,COG1020@2|Bacteria,1TPTH@1239|Firmicutes,4HAHU@91061|Bacilli,1ZB3S@1386|Bacillus	91061|Bacilli	Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	-	-	-	ko:K15664,ko:K15666,ko:K15667	ko01054,map01054	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding
PHALIAPI_01910	224308.BSU18350	0.0	936.0	COG2027@1|root,COG2027@2|Bacteria,1TQFQ@1239|Firmicutes,4HA3X@91061|Bacilli,1ZBNY@1386|Bacillus	91061|Bacilli	M	D-alanyl-D-alanine carboxypeptidase	dacC	-	3.4.16.4	ko:K07259	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	Peptidase_S13
PHALIAPI_01911	224308.BSU18360	1.45e-235	647.0	COG2017@1|root,COG2017@2|Bacteria,1TS6R@1239|Firmicutes,4IRTK@91061|Bacilli,1ZGMA@1386|Bacillus	91061|Bacilli	G	Aldose 1-epimerase	yoxA	GO:0003674,GO:0003824,GO:0004034,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006012,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046365,GO:0071704,GO:1901575	5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldose_epim
PHALIAPI_01912	224308.BSU18370	2.3e-311	851.0	COG0534@1|root,COG0534@2|Bacteria,1TNZN@1239|Firmicutes,4HANM@91061|Bacilli,1ZEAW@1386|Bacillus	91061|Bacilli	V	MATE efflux family protein	yoeA	-	-	-	-	-	-	-	-	-	-	-	MatE
PHALIAPI_01913	224308.BSU18380	4.13e-127	361.0	2DQ89@1|root,33587@2|Bacteria,1VHBN@1239|Firmicutes,4HP4B@91061|Bacilli,1ZH85@1386|Bacillus	91061|Bacilli	S	IseA DL-endopeptidase inhibitor	yoeB	-	-	-	-	-	-	-	-	-	-	-	Endopep_inhib
PHALIAPI_01915	224308.BSU18390	1.14e-124	355.0	COG0582@1|root,COG0582@2|Bacteria,1V2RX@1239|Firmicutes,4HE06@91061|Bacilli,1ZGYW@1386|Bacillus	91061|Bacilli	L	Integrase	-	-	-	-	-	-	-	-	-	-	-	-	Phage_integrase
PHALIAPI_01916	224308.BSU18400	1.11e-45	147.0	COG0166@1|root,COG0166@2|Bacteria,1VFQ2@1239|Firmicutes,4HNRS@91061|Bacilli,1ZIWJ@1386|Bacillus	91061|Bacilli	G	Helix-turn-helix domain	yoeD	-	-	-	-	-	-	-	-	-	-	-	HTH_17
PHALIAPI_01917	224308.BSU18410	0.0	1163.0	COG0405@1|root,COG0405@2|Bacteria,1TR9U@1239|Firmicutes,4HB23@91061|Bacilli,1ZCVJ@1386|Bacillus	91061|Bacilli	E	gamma-glutamyltransferase	ggt	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
PHALIAPI_01918	224308.BSU18420	2.81e-197	547.0	COG0583@1|root,COG0583@2|Bacteria,1UCV1@1239|Firmicutes,4HE6I@91061|Bacilli	91061|Bacilli	K	Transcriptional regulator	gltR1	-	-	ko:K21959	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
PHALIAPI_01919	224308.BSU18430	2.42e-236	650.0	COG0604@1|root,COG0604@2|Bacteria,1TRRF@1239|Firmicutes,4HBSF@91061|Bacilli,1ZC7U@1386|Bacillus	91061|Bacilli	C	COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases	yogA	-	-	ko:K13955	-	-	-	-	ko00000	-	-	-	ADH_N,ADH_zinc_N
PHALIAPI_01920	224308.BSU18440	0.0	999.0	COG0493@1|root,COG0493@2|Bacteria,1TQ1A@1239|Firmicutes,4HAD5@91061|Bacilli,1ZC3C@1386|Bacillus	91061|Bacilli	E	COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases	gltD	-	1.4.1.13,1.4.1.14	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS02450	Fer4_20,Pyr_redox_2
PHALIAPI_01921	224308.BSU18450	0.0	2984.0	COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,1TQ0B@1239|Firmicutes,4HA4G@91061|Bacilli,1ZBFF@1386|Bacillus	91061|Bacilli	E	glutamate synthase	gltA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.4.1.13,1.4.1.14,1.4.7.1	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	-	R00021,R00093,R00114,R00248,R10086	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	GATase_2,GXGXG,Glu_syn_central,Glu_synthase
PHALIAPI_01922	224308.BSU18460	2.61e-205	569.0	COG0583@1|root,COG0583@2|Bacteria,1TRVX@1239|Firmicutes,4HA1X@91061|Bacilli,1ZCDN@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	gltC	GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	ko:K09681	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
PHALIAPI_01923	224308.BSU18470	6.68e-262	718.0	COG0263@1|root,COG0263@2|Bacteria,1TPG6@1239|Firmicutes,4HA9B@91061|Bacilli,1ZAPU@1386|Bacillus	91061|Bacilli	E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate	proB	GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.11	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	M00015	R00239	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,PUA
PHALIAPI_01924	224308.BSU18480	2.72e-185	517.0	COG0345@1|root,COG0345@2|Bacteria,1TP1E@1239|Firmicutes,4H9RV@91061|Bacilli,1ZCWZ@1386|Bacillus	91061|Bacilli	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline	proC	-	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU18480	F420_oxidored,P5CR_dimer
PHALIAPI_01925	224308.BSU18490	5.37e-79	235.0	COG1695@1|root,COG1695@2|Bacteria,1V4I3@1239|Firmicutes,4HHBU@91061|Bacilli,1ZGU9@1386|Bacillus	91061|Bacilli	K	Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat	rtp	-	-	-	-	-	-	-	-	-	-	-	RTP
PHALIAPI_01926	224308.BSU18500	2.28e-159	447.0	COG0300@1|root,COG0300@2|Bacteria,1UG37@1239|Firmicutes,4HC7Y@91061|Bacilli,1ZDQ3@1386|Bacillus	91061|Bacilli	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	fabG	-	1.1.1.100	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short
PHALIAPI_01927	224308.BSU18510	2.7e-51	163.0	COG4768@1|root,COG4768@2|Bacteria	2|Bacteria	S	Bacterial protein of unknown function (DUF948)	yoxC	-	-	-	-	-	-	-	-	-	-	-	DUF948
PHALIAPI_01928	224308.BSU18520	1e-171	480.0	28PVT@1|root,2ZCGB@2|Bacteria,1V3TG@1239|Firmicutes,4HHU4@91061|Bacilli,1ZG2Q@1386|Bacillus	91061|Bacilli	-	-	yoxB	-	-	-	-	-	-	-	-	-	-	-	UDG
PHALIAPI_01929	224308.BSU18530	2.31e-122	349.0	COG1670@1|root,COG1670@2|Bacteria,1V2C6@1239|Firmicutes,4HG3C@91061|Bacilli,1ZGGH@1386|Bacillus	91061|Bacilli	J	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins	yoaA	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
PHALIAPI_01930	224308.BSU18540	2.61e-299	816.0	COG0477@1|root,COG2814@2|Bacteria,1TRNB@1239|Firmicutes,4HCAI@91061|Bacilli,1ZCJH@1386|Bacillus	91061|Bacilli	EGP	the major facilitator superfamily	yoaB	-	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_01931	224308.BSU18550	0.0	947.0	COG1070@1|root,COG1070@2|Bacteria,1TQ1I@1239|Firmicutes,4HBRJ@91061|Bacilli,1ZMJ7@1386|Bacillus	91061|Bacilli	G	FGGY family of carbohydrate kinases, C-terminal domain	lsrK	-	2.7.1.189	ko:K11216	ko02024,map02024	-	R11183	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
PHALIAPI_01932	224308.BSU18560	3.36e-234	645.0	COG0111@1|root,COG0111@2|Bacteria,1UY3Y@1239|Firmicutes,4HMWA@91061|Bacilli,1ZENF@1386|Bacillus	91061|Bacilli	EH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	yoaD	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
PHALIAPI_01933	224308.BSU18570	0.0	1363.0	COG0243@1|root,COG0243@2|Bacteria,1TPZG@1239|Firmicutes,4HBA3@91061|Bacilli,1ZAU8@1386|Bacillus	91061|Bacilli	C	belongs to the prokaryotic molybdopterin-containing oxidoreductase family	yoaE	-	-	-	-	-	-	-	-	-	-	-	Molybdop_Fe4S4,Molybdopterin,Molydop_binding
PHALIAPI_01934	1051501.AYTL01000030_gene2213	4.37e-46	150.0	2CH62@1|root,32S5C@2|Bacteria,1VD6E@1239|Firmicutes,4HKZ3@91061|Bacilli,1ZI0G@1386|Bacillus	91061|Bacilli	-	-	yoaF	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01935	224308.BSU18596	6.99e-18	74.7	2C1AY@1|root,2ZPBJ@2|Bacteria,1W5BI@1239|Firmicutes,4I1SU@91061|Bacilli,1ZK8V@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01936	224308.BSU18600	1.43e-53	169.0	2EIXM@1|root,2ZSX9@2|Bacteria,1W2TZ@1239|Firmicutes,4I06A@91061|Bacilli	91061|Bacilli	S	Protein of unknown function (DUF4025)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4025
PHALIAPI_01937	224308.BSU18610	5.91e-313	863.0	COG0840@1|root,COG5278@1|root,COG0840@2|Bacteria,COG5278@2|Bacteria,1TP5A@1239|Firmicutes,4H9RZ@91061|Bacilli,1ZMP8@1386|Bacillus	91061|Bacilli	NT	methyl-accepting chemotaxis protein	yoaH	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,dCache_1
PHALIAPI_01938	224308.BSU18620	0.0	948.0	COG2368@1|root,COG2368@2|Bacteria,1TQ70@1239|Firmicutes,4HA4I@91061|Bacilli,1ZDRC@1386|Bacillus	91061|Bacilli	Q	COG2368 Aromatic ring hydroxylase	yoaI	-	1.14.14.9	ko:K00483	ko00350,ko01120,ko01220,map00350,map01120,map01220	-	R02698,R03299	RC00046	ko00000,ko00001,ko01000	-	-	-	HpaB,HpaB_N
PHALIAPI_01939	224308.BSU18630	7.48e-171	476.0	COG4305@1|root,COG4305@2|Bacteria,1UYVA@1239|Firmicutes,4HTET@91061|Bacilli,1ZMHI@1386|Bacillus	91061|Bacilli	G	Endoglucanase C-terminal domain subunit and related proteins	yoaJ	-	-	ko:K20628	-	-	-	-	ko00000	-	-	-	DPBB_1,Pollen_allerg_1
PHALIAPI_01940	224308.BSU18640	2.09e-144	409.0	COG3619@1|root,COG3619@2|Bacteria,1VBZN@1239|Firmicutes,4HMQK@91061|Bacilli,1ZFAA@1386|Bacillus	91061|Bacilli	S	Membrane	yoaK	-	-	-	-	-	-	-	-	-	-	-	DUF1275
PHALIAPI_01941	224308.BSU18650	1.23e-251	690.0	COG3866@1|root,COG3866@2|Bacteria,1VQVQ@1239|Firmicutes,4HTPK@91061|Bacilli	91061|Bacilli	G	Amb_all	-	-	4.2.2.10	ko:K01732	-	-	-	-	ko00000,ko01000	-	-	-	Pec_lyase_C
PHALIAPI_01942	224308.BSU18660	1.22e-70	217.0	COG2135@1|root,COG2135@2|Bacteria,1TRRV@1239|Firmicutes,4HDUN@91061|Bacilli,1ZCQB@1386|Bacillus	91061|Bacilli	S	Belongs to the SOS response-associated peptidase family	yoqW	-	-	-	-	-	-	-	-	-	-	-	SRAP
PHALIAPI_01944	224308.BSU18670	6.26e-293	798.0	COG2140@1|root,COG2140@2|Bacteria,1TPC2@1239|Firmicutes,4HA6V@91061|Bacilli,1ZBBS@1386|Bacillus	91061|Bacilli	G	Oxalate decarboxylase	oxdD	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0033609,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0046564,GO:0071704	4.1.1.2	ko:K01569	ko00630,ko01100,map00630,map01100	-	R00522	RC00321	ko00000,ko00001,ko01000	-	-	iYO844.BSU18670	Cupin_1
PHALIAPI_01947	224308.BSU18710	2.86e-108	312.0	2EV9F@1|root,33IVQ@2|Bacteria,1VQIU@1239|Firmicutes,4HRBH@91061|Bacilli,1ZQPK@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01948	224308.BSU18720	1.73e-216	597.0	COG2720@1|root,COG2720@2|Bacteria,1TSH8@1239|Firmicutes,4HCPD@91061|Bacilli,1ZBNK@1386|Bacillus	91061|Bacilli	V	vancomycin resistance protein	yoaR	-	-	-	-	-	-	-	-	-	-	-	PG_binding_4,VanW
PHALIAPI_01949	224308.BSU18730	1.53e-96	282.0	293T3@1|root,2ZR8H@2|Bacteria,1V593@1239|Firmicutes,4HG8Q@91061|Bacilli,1ZFS5@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2975)	yoaS	-	-	-	-	-	-	-	-	-	-	-	DUF2975
PHALIAPI_01950	279010.BL00569	7.19e-41	135.0	COG3655@1|root,COG3655@2|Bacteria,1VESP@1239|Firmicutes,4HKR7@91061|Bacilli,1ZHUY@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yozG	-	-	ko:K07727	-	-	-	-	ko00000,ko03000	-	-	-	HTH_26
PHALIAPI_01951	224308.BSU18750	5.46e-189	525.0	COG3739@1|root,COG3739@2|Bacteria,1TSSG@1239|Firmicutes,4H9MC@91061|Bacilli,1ZCEJ@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF817)	yoaT	-	-	-	-	-	-	-	-	-	-	-	DUF817
PHALIAPI_01952	224308.BSU18760	1.91e-202	561.0	COG0583@1|root,COG0583@2|Bacteria,1V275@1239|Firmicutes,4HCKR@91061|Bacilli,1ZMPJ@1386|Bacillus	91061|Bacilli	K	LysR substrate binding domain	yoaU	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
PHALIAPI_01953	224308.BSU18770	1.76e-199	553.0	COG0697@1|root,COG0697@2|Bacteria,1U3VF@1239|Firmicutes,4IQWZ@91061|Bacilli,1ZHPV@1386|Bacillus	91061|Bacilli	EG	EamA-like transporter family	yoaV	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_01954	224308.BSU18780	1.61e-101	293.0	29QTX@1|root,30BTX@2|Bacteria,1U8NQ@1239|Firmicutes,4IIKN@91061|Bacilli,1ZNRJ@1386|Bacillus	91061|Bacilli	-	-	yoaW	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01955	224308.BSU18790	1.7e-147	415.0	COG0693@1|root,COG0693@2|Bacteria,1TPJK@1239|Firmicutes,4HGTS@91061|Bacilli,1ZCPK@1386|Bacillus	91061|Bacilli	S	DJ-1/PfpI family	lin0465	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
PHALIAPI_01956	224308.BSU18800	4.22e-214	592.0	COG2367@1|root,COG2367@2|Bacteria,1TQFB@1239|Firmicutes,4HAQ1@91061|Bacilli,1ZBKB@1386|Bacillus	91061|Bacilli	V	beta-lactamase	penP	GO:0005575,GO:0005576	3.5.2.6	ko:K17836,ko:K18766	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2
PHALIAPI_01959	224308.BSU18830	0.0	1650.0	COG0574@1|root,COG3848@1|root,COG0574@2|Bacteria,COG3848@2|Bacteria,1UYA0@1239|Firmicutes,4HD4S@91061|Bacilli,1ZAW5@1386|Bacillus	91061|Bacilli	GT	phosphoenolpyruvate synthase	pps	-	2.7.9.2	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	M00173,M00374	R00199	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PPDK_N
PHALIAPI_01960	224308.BSU18840	7.53e-157	439.0	COG0726@1|root,COG0726@2|Bacteria,1UZ2U@1239|Firmicutes,4HVCK@91061|Bacilli,1ZEQK@1386|Bacillus	91061|Bacilli	G	Glycosyl hydrolases family 11	xlnB	GO:0005575,GO:0016020	3.2.1.8	ko:K01181	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_11
PHALIAPI_01962	224308.BSU18960	1.15e-52	167.0	291HX@1|root,2ZP4F@2|Bacteria,1W3P9@1239|Firmicutes,4I063@91061|Bacilli,1ZKG0@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01963	997346.HMPREF9374_1613	5.34e-62	192.0	2927C@1|root,30BU7@2|Bacteria,1U8NW@1239|Firmicutes,4IIKY@91061|Bacilli,27D1V@186824|Thermoactinomycetaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01964	224308.BSU18990	2.24e-110	317.0	2E17N@1|root,32WNB@2|Bacteria,1VDC9@1239|Firmicutes,4HHCQ@91061|Bacilli,1ZFJS@1386|Bacillus	91061|Bacilli	S	SMI1-KNR4 cell-wall	-	-	-	ko:K21488	-	-	-	-	ko00000,ko02048	-	-	-	SUKH_5
PHALIAPI_01965	224308.BSU19000	0.0	1103.0	COG5444@1|root,COG5444@2|Bacteria,1V897@1239|Firmicutes,4HIMS@91061|Bacilli,1ZIHP@1386|Bacillus	91061|Bacilli	L	A nuclease of the HNH/ENDO VII superfamily with conserved LHH	-	-	-	ko:K21487	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	EndoU_bacteria,LHH,LXG
PHALIAPI_01966	224308.BSU19010	9.75e-133	376.0	COG4282@1|root,COG4282@2|Bacteria,1W2DK@1239|Firmicutes,4I1HJ@91061|Bacilli,1ZHYP@1386|Bacillus	91061|Bacilli	G	SMI1 / KNR4 family	yokH	-	-	-	-	-	-	-	-	-	-	-	SMI1_KNR4
PHALIAPI_01967	224308.BSU19020	0.0	948.0	COG1231@1|root,COG1231@2|Bacteria,1TRJC@1239|Firmicutes,4HBN4@91061|Bacilli,1ZBU2@1386|Bacillus	91061|Bacilli	E	COG1231 Monoamine oxidase	iaaM	-	1.4.3.4	ko:K00274	ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034	M00135	R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354	RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
PHALIAPI_01968	224308.BSU19040	5.21e-71	214.0	COG0073@1|root,COG0073@2|Bacteria,1V6N9@1239|Firmicutes,4HINY@91061|Bacilli,1ZH62@1386|Bacillus	91061|Bacilli	J	tRNA-binding protein	csaA	GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K06878	-	-	-	-	ko00000	-	-	-	tRNA_bind
PHALIAPI_01969	224308.BSU19050	1.38e-170	476.0	COG0662@1|root,COG2207@1|root,COG0662@2|Bacteria,COG2207@2|Bacteria,1V4EJ@1239|Firmicutes,4HJ2M@91061|Bacilli,1ZF13@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, arabinose operon control protein	yobQ	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,Cupin_2,HTH_18
PHALIAPI_01970	224308.BSU19060	1.63e-21	90.1	COG0454@1|root,COG0456@2|Bacteria,1V37I@1239|Firmicutes,4HJ2D@91061|Bacilli,1ZQJP@1386|Bacillus	91061|Bacilli	J	FR47-like protein	-	GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_01971	224308.BSU19070	1.16e-105	308.0	COG1309@1|root,COG1309@2|Bacteria,1V1DM@1239|Firmicutes,4HG0Y@91061|Bacilli,1ZCT7@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yobS	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
PHALIAPI_01972	224308.BSU19080	1.44e-164	460.0	COG0491@1|root,COG0491@2|Bacteria,1TPPD@1239|Firmicutes,4HB0S@91061|Bacilli,1ZCBS@1386|Bacillus	91061|Bacilli	S	COG0491 Zn-dependent hydrolases, including glyoxylases	yobT	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
PHALIAPI_01973	224308.BSU19090	2.89e-110	317.0	COG3708@1|root,COG3708@2|Bacteria,1VXXE@1239|Firmicutes,4HWWS@91061|Bacilli,1ZI69@1386|Bacillus	91061|Bacilli	K	Bacterial transcription activator, effector binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Cass2,GyrI-like
PHALIAPI_01974	224308.BSU19100	3.76e-218	602.0	COG2378@1|root,COG2378@2|Bacteria,1TT23@1239|Firmicutes,4HIPG@91061|Bacilli,1ZQBA@1386|Bacillus	91061|Bacilli	K	WYL domain	yobV	-	-	-	-	-	-	-	-	-	-	-	HTH_11,WYL
PHALIAPI_01975	224308.BSU19110	4.27e-120	343.0	2DUZZ@1|root,32UY8@2|Bacteria,1VAX8@1239|Firmicutes,4HMKW@91061|Bacilli,1ZF86@1386|Bacillus	91061|Bacilli	-	-	yobW	-	-	-	-	-	-	-	-	-	-	-	DUF1453
PHALIAPI_01976	224308.BSU19120	8.12e-69	208.0	COG0640@1|root,COG0640@2|Bacteria,1VA6G@1239|Firmicutes,4HKYT@91061|Bacilli,1ZGXI@1386|Bacillus	91061|Bacilli	K	transcriptional	czrA	-	-	ko:K22043	-	-	-	-	ko00000,ko03000	-	-	-	HTH_5
PHALIAPI_01977	224308.BSU19130	3.28e-157	441.0	COG0741@1|root,COG0741@2|Bacteria,1VD4A@1239|Firmicutes,4HN7R@91061|Bacilli,1ZDE7@1386|Bacillus	91061|Bacilli	M	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)	yocA	-	-	-	-	-	-	-	-	-	-	-	CHAP,Lysozyme_like
PHALIAPI_01978	1051501.AYTL01000030_gene2262	3.97e-119	341.0	COG2322@1|root,COG2322@2|Bacteria,1V3KT@1239|Firmicutes,4HH92@91061|Bacilli,1ZFN2@1386|Bacillus	91061|Bacilli	S	membrane	yozB	-	-	ko:K08976	-	-	-	-	ko00000	-	-	-	DUF420
PHALIAPI_01979	224308.BSU19150	2.05e-182	508.0	297WE@1|root,2ZV2Y@2|Bacteria,1VW2D@1239|Firmicutes,4HW4N@91061|Bacilli,1ZSJT@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01980	224308.BSU19160	6.27e-121	344.0	28PIX@1|root,2ZC8R@2|Bacteria,1V2BK@1239|Firmicutes,4HGS0@91061|Bacilli,1ZG7B@1386|Bacillus	91061|Bacilli	-	-	yocC	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_01981	224308.BSU19170	3.72e-238	654.0	COG1619@1|root,COG1619@2|Bacteria,1TRBB@1239|Firmicutes,4HB1P@91061|Bacilli,1ZQ9Y@1386|Bacillus	91061|Bacilli	V	peptidase S66	yocD	-	3.4.17.13	ko:K01297	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_S66
PHALIAPI_01982	224308.BSU19180	1.14e-257	706.0	COG3239@1|root,COG3239@2|Bacteria,1TP3B@1239|Firmicutes,4H9TS@91061|Bacilli,1ZAYJ@1386|Bacillus	91061|Bacilli	I	fatty acid desaturase	des	-	1.14.19.23,1.14.19.45	ko:K10255	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
PHALIAPI_01983	224308.BSU19190	7.91e-249	685.0	COG4585@1|root,COG4585@2|Bacteria,1TSUE@1239|Firmicutes,4HB9N@91061|Bacilli,1ZBZR@1386|Bacillus	91061|Bacilli	T	Histidine kinase	desK	GO:0003674,GO:0003824,GO:0004721,GO:0005488,GO:0005515,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564	2.7.13.3	ko:K07778	ko02020,map02020	M00479	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA_3
PHALIAPI_01984	224308.BSU19200	4.71e-135	383.0	COG2197@1|root,COG2197@2|Bacteria,1TVTF@1239|Firmicutes,4HAJW@91061|Bacilli,1ZC1V@1386|Bacillus	91061|Bacilli	T	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	desR	-	-	ko:K02479,ko:K07693	ko02020,map02020	M00479	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	GerE,Response_reg
PHALIAPI_01986	224308.BSU19210	9.63e-174	488.0	COG1388@1|root,COG3584@1|root,COG1388@2|Bacteria,COG3584@2|Bacteria,1UV4J@1239|Firmicutes,4HCGU@91061|Bacilli,1ZFSM@1386|Bacillus	91061|Bacilli	M	COG1388 FOG LysM repeat	yocH	-	-	-	-	-	-	-	-	-	-	-	3D,LysM
PHALIAPI_01987	224308.BSU19220	0.0	1160.0	COG0514@1|root,COG0514@2|Bacteria,1TPN5@1239|Firmicutes,4H9QP@91061|Bacilli,1ZC4U@1386|Bacillus	91061|Bacilli	L	DNA helicase	recQ	GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind
PHALIAPI_01989	224308.BSU19230	1.46e-147	415.0	COG1182@1|root,COG1182@2|Bacteria,1UGCK@1239|Firmicutes,4HAPQ@91061|Bacilli,1ZR58@1386|Bacillus	91061|Bacilli	I	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity	azoR	-	-	ko:K01118	-	-	-	-	ko00000,ko01000	-	-	-	Flavodoxin_2
PHALIAPI_01990	224308.BSU19240	2.87e-107	310.0	COG1734@1|root,COG1734@2|Bacteria,1W0NA@1239|Firmicutes,4HZ77@91061|Bacilli,1ZG5H@1386|Bacillus	91061|Bacilli	T	general stress protein	yocK	-	-	-	-	-	-	-	-	-	-	-	zf-dskA_traR
PHALIAPI_01991	224308.BSU19250	3.53e-69	209.0	2B51N@1|root,31XUX@2|Bacteria,1U9H0@1239|Firmicutes,4IJM1@91061|Bacilli,1ZGBD@1386|Bacillus	91061|Bacilli	-	-	yocL	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01992	224308.BSU19259	5.79e-43	140.0	29S4P@1|root,30D96@2|Bacteria,1UB0T@1239|Firmicutes,4IMDM@91061|Bacilli,1ZJWA@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01993	224308.BSU19260	6.6e-115	328.0	COG0071@1|root,COG0071@2|Bacteria,1VIHI@1239|Firmicutes,4HPSX@91061|Bacilli,1ZFR8@1386|Bacillus	91061|Bacilli	O	Belongs to the small heat shock protein (HSP20) family	yocM	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
PHALIAPI_01994	224308.BSU19270	2.94e-55	172.0	2EHWS@1|root,33BND@2|Bacteria,1VPU6@1239|Firmicutes,4HRS1@91061|Bacilli,1ZHT1@1386|Bacillus	91061|Bacilli	-	-	yozN	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01995	224308.BSU19280	1.83e-49	157.0	2EFR8@1|root,339HA@2|Bacteria,1VHR4@1239|Firmicutes,4HQMM@91061|Bacilli,1ZIJX@1386|Bacillus	91061|Bacilli	-	-	yocN	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01996	224308.BSU19290	2.17e-74	223.0	arCOG12631@1|root,303Q6@2|Bacteria,1VFEW@1239|Firmicutes,4IKCU@91061|Bacilli,1ZGGS@1386|Bacillus	91061|Bacilli	S	Bacterial PH domain	yozO	-	-	-	-	-	-	-	-	-	-	-	bPH_1
PHALIAPI_01997	224308.BSU19300	1.91e-42	138.0	2E3WX@1|root,32YU3@2|Bacteria,1VFHJ@1239|Firmicutes,4HPQ5@91061|Bacilli,1ZITX@1386|Bacillus	91061|Bacilli	-	-	yozC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_01998	224308.BSU19310	0.0	995.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4H9MF@91061|Bacilli,1ZAY9@1386|Bacillus	91061|Bacilli	C	Belongs to the aldehyde dehydrogenase family	dhaS	-	1.2.1.3,1.2.1.39	ko:K00128,ko:K00146	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00360,ko00380,ko00410,ko00561,ko00620,ko00625,ko00643,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00360,map00380,map00410,map00561,map00620,map00625,map00643,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02536,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
PHALIAPI_01999	224308.BSU19320	0.0	1227.0	COG1657@1|root,COG1657@2|Bacteria,1TRRG@1239|Firmicutes,4HA2Q@91061|Bacilli,1ZBBW@1386|Bacillus	91061|Bacilli	I	COG1657 Squalene cyclase	sqhC	-	4.2.1.137	ko:K18115	-	-	-	-	ko00000,ko01000	-	-	-	SQHop_cyclase_C,SQHop_cyclase_N
PHALIAPI_02000	224308.BSU19330	3.91e-211	582.0	COG0605@1|root,COG0605@2|Bacteria,1TPXT@1239|Firmicutes,4HAX6@91061|Bacilli,1ZB6Q@1386|Bacillus	91061|Bacilli	P	Superoxide dismutase	sodF	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	DUF2935,Sod_Fe_C,Sod_Fe_N
PHALIAPI_02001	224308.BSU19340	3.57e-299	818.0	COG0733@1|root,COG0733@2|Bacteria,1TP6B@1239|Firmicutes,4HAAI@91061|Bacilli,1ZBC5@1386|Bacillus	91061|Bacilli	S	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family	yocR	-	-	ko:K03308	-	-	-	-	ko00000	2.A.22.4,2.A.22.5	-	-	SNF
PHALIAPI_02002	224308.BSU19350	2.72e-213	591.0	COG0385@1|root,COG0385@2|Bacteria,1TP85@1239|Firmicutes,4HBG6@91061|Bacilli,1ZB6V@1386|Bacillus	91061|Bacilli	S	-transporter	yocS	-	-	ko:K03453	-	-	-	-	ko00000	2.A.28	-	iYO844.BSU19350	SBF
PHALIAPI_02003	224308.BSU19360	2.59e-264	728.0	COG0508@1|root,COG0508@2|Bacteria,1TP3C@1239|Firmicutes,4HBVM@91061|Bacilli,1ZBCB@1386|Bacillus	91061|Bacilli	C	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)	odhB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
PHALIAPI_02004	224308.BSU19370	0.0	1879.0	COG0567@1|root,COG0567@2|Bacteria,1TRDW@1239|Firmicutes,4HAUI@91061|Bacilli,1ZAX3@1386|Bacillus	91061|Bacilli	C	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)	odhA	GO:0003674,GO:0003824,GO:0004591,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016624,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0055114,GO:0071704,GO:0072350,GO:1902494,GO:1990204,GO:1990234	1.2.4.2	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R00621,R01933,R01940,R03316,R08549	RC00004,RC00027,RC00627,RC02743,RC02833,RC02883	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr
PHALIAPI_02005	224308.BSU19380	0.0	1238.0	COG4548@1|root,COG4548@2|Bacteria,1TPW1@1239|Firmicutes,4HCPJ@91061|Bacilli,1ZD6R@1386|Bacillus	91061|Bacilli	P	Von Willebrand factor	yojO	-	-	-	-	-	-	-	-	-	-	-	CobT_C,VWA
PHALIAPI_02006	224308.BSU19390	1.33e-207	575.0	COG0714@1|root,COG0714@2|Bacteria,1TQJA@1239|Firmicutes,4HBG4@91061|Bacilli,1ZAT6@1386|Bacillus	91061|Bacilli	S	ATPase family associated with various cellular activities (AAA)	yojN	-	-	ko:K04748	-	-	R00294	RC02794	ko00000	3.D.4.10	-	-	AAA_5,CbbQ_C
PHALIAPI_02007	224308.BSU19400	6.01e-141	397.0	COG2032@1|root,COG2032@2|Bacteria,1V652@1239|Firmicutes,4HH67@91061|Bacilli,1ZE46@1386|Bacillus	91061|Bacilli	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodC	GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044421,GO:0046872,GO:0046914,GO:0046983,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748	1.15.1.1	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Cu
PHALIAPI_02008	224308.BSU19410	1.3e-267	736.0	COG0791@1|root,COG1388@1|root,COG0791@2|Bacteria,COG1388@2|Bacteria,1TP24@1239|Firmicutes,4HA77@91061|Bacilli,1ZCHY@1386|Bacillus	91061|Bacilli	M	COG1388 FOG LysM repeat	-	-	-	ko:K19220,ko:K19223,ko:K19224	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	CBM50	-	LysM,NLPC_P60
PHALIAPI_02009	224308.BSU19420	3.25e-293	800.0	COG1819@1|root,COG1819@2|Bacteria,1TSPC@1239|Firmicutes,4HRJW@91061|Bacilli,1ZRSZ@1386|Bacillus	91061|Bacilli	CG	UDP-glucoronosyl and UDP-glucosyl transferase	yojK	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008194,GO:0016740,GO:0016757,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464	-	-	-	-	-	-	-	-	-	-	UDPGT
PHALIAPI_02010	224308.BSU19430	2.14e-141	399.0	COG1624@1|root,COG1624@2|Bacteria,1V3J8@1239|Firmicutes,4HHIB@91061|Bacilli,1ZGH7@1386|Bacillus	91061|Bacilli	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria	dacB	GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849	2.7.7.85	ko:K18672	-	-	-	-	ko00000,ko01000	-	-	-	DisA_N,YojJ
PHALIAPI_02012	224308.BSU19440	1.69e-312	853.0	COG0534@1|root,COG0534@2|Bacteria,1TP5U@1239|Firmicutes,4HA4W@91061|Bacilli,1ZAX6@1386|Bacillus	91061|Bacilli	V	Multidrug efflux pump	norM	GO:0003674,GO:0005215,GO:0006810,GO:0006855,GO:0008150,GO:0015238,GO:0015893,GO:0022857,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0046677,GO:0050896,GO:0051179,GO:0051234,GO:0055085	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
PHALIAPI_02013	224308.BSU19450	1.01e-193	538.0	COG1366@1|root,COG1366@2|Bacteria,1V1QF@1239|Firmicutes,4HGBT@91061|Bacilli,1ZDJX@1386|Bacillus	91061|Bacilli	T	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)	-	-	-	ko:K17763	-	-	-	-	ko00000,ko03021	-	-	-	STAS
PHALIAPI_02014	224308.BSU19460	1.84e-161	451.0	COG2120@1|root,COG2120@2|Bacteria,1TPSJ@1239|Firmicutes,4HA2P@91061|Bacilli,1ZB3T@1386|Bacillus	91061|Bacilli	S	deacetylase	yojG	-	-	ko:K22135	-	-	-	-	ko00000,ko01000	-	-	-	PIG-L
PHALIAPI_02015	224308.BSU19470	2.32e-79	235.0	COG2120@1|root,COG2120@2|Bacteria,1VA8Q@1239|Firmicutes,4HKMK@91061|Bacilli,1ZH30@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1806)	yojF	-	-	-	-	-	-	-	-	-	-	-	DUF1806
PHALIAPI_02016	224308.BSU19479	3.08e-57	177.0	29HMR@1|root,304J1@2|Bacteria,1TWSW@1239|Firmicutes,4I5M0@91061|Bacilli,1ZJ8C@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02017	224308.BSU19480	8.13e-208	575.0	COG2962@1|root,COG2962@2|Bacteria,1TQF2@1239|Firmicutes,4HAYU@91061|Bacilli,1ZD78@1386|Bacillus	91061|Bacilli	S	-transporter	rarD	-	-	ko:K05786	-	-	-	-	ko00000,ko02000	2.A.7.7	-	-	EamA
PHALIAPI_02018	224308.BSU19490	8.34e-104	300.0	2DR1M@1|root,339SJ@2|Bacteria,1VMD6@1239|Firmicutes,4HRV5@91061|Bacilli,1ZGEB@1386|Bacillus	91061|Bacilli	S	COG0071 Molecular chaperone (small heat shock protein)	yozR	-	-	-	-	-	-	-	-	-	-	-	CS
PHALIAPI_02019	1178540.BA70_14055	9.2e-13	64.3	2B7QS@1|root,320WV@2|Bacteria,1UAN7@1239|Firmicutes,4IM0U@91061|Bacilli,1ZIN1@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02020	224308.BSU19520	2.27e-290	796.0	COG2610@1|root,COG2610@2|Bacteria,1TQ14@1239|Firmicutes,4HB0Y@91061|Bacilli,1ZAYI@1386|Bacillus	91061|Bacilli	EG	COG2610 H gluconate symporter and related permeases	gntP	GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0015075,GO:0015128,GO:0015144,GO:0015318,GO:0015711,GO:0015718,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034219,GO:0034220,GO:0035429,GO:0042873,GO:0042879,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
PHALIAPI_02021	224308.BSU19530	3.27e-83	246.0	COG1942@1|root,COG1942@2|Bacteria,1V3SS@1239|Firmicutes,4HI9G@91061|Bacilli,1ZG7P@1386|Bacillus	91061|Bacilli	S	tautomerase	iolK	-	-	-	-	-	-	-	-	-	-	-	Tautomerase_2
PHALIAPI_02022	224308.BSU19540	3.74e-73	219.0	COG1733@1|root,COG1733@2|Bacteria,1VBI7@1239|Firmicutes,4HKBR@91061|Bacilli,1ZH23@1386|Bacillus	91061|Bacilli	K	transcriptional	yodB	GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	-	-	-	-	-	-	-	-	-	HxlR
PHALIAPI_02023	224308.BSU19550	1.11e-139	395.0	COG0778@1|root,COG0778@2|Bacteria,1UXYI@1239|Firmicutes,4HBMN@91061|Bacilli,1ZQ88@1386|Bacillus	91061|Bacilli	C	nitroreductase	yodC	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
PHALIAPI_02024	224308.BSU19560	7.28e-144	405.0	COG0400@1|root,COG0400@2|Bacteria,1TPBY@1239|Firmicutes,4HB45@91061|Bacilli,1ZAQZ@1386|Bacillus	91061|Bacilli	S	Carboxylesterase	yahD	-	-	ko:K06999	-	-	-	-	ko00000	-	-	-	Abhydrolase_2,DLH
PHALIAPI_02025	224308.BSU19570	5.38e-220	606.0	COG0346@1|root,COG0346@2|Bacteria,1TQCN@1239|Firmicutes,4HAMC@91061|Bacilli,1ZAQY@1386|Bacillus	91061|Bacilli	E	COG0346 Lactoylglutathione lyase and related lyases	yodE	-	-	ko:K15975	-	-	-	-	ko00000	-	-	-	Glyoxalase
PHALIAPI_02026	224308.BSU19579	4.77e-38	127.0	2EFSS@1|root,339IS@2|Bacteria,1VMRC@1239|Firmicutes,4HR88@91061|Bacilli,1ZI2T@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3311)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3311
PHALIAPI_02027	224308.BSU19580	0.0	931.0	COG0591@1|root,COG0591@2|Bacteria,1TRYH@1239|Firmicutes,4HE2W@91061|Bacilli,1ZCBN@1386|Bacillus	91061|Bacilli	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	yodF	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
PHALIAPI_02028	224308.BSU19590	0.0	879.0	COG0793@1|root,COG3409@1|root,COG0793@2|Bacteria,COG3409@2|Bacteria,1TPBI@1239|Firmicutes,4HAKE@91061|Bacilli,1ZBDE@1386|Bacillus	91061|Bacilli	M	Belongs to the peptidase S41A family	ctpA	GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ,PDZ_2,PG_binding_1,Peptidase_S41
PHALIAPI_02029	224308.BSU19600	5.24e-167	466.0	COG0500@1|root,COG2226@2|Bacteria,1V4RW@1239|Firmicutes,4HIF0@91061|Bacilli,1ZE3P@1386|Bacillus	91061|Bacilli	Q	Methyltransferase	yodH	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25,Methyltransf_31
PHALIAPI_02030	224308.BSU19610	4.86e-41	136.0	2DPDU@1|root,331PB@2|Bacteria,1VFH2@1239|Firmicutes,4HQIZ@91061|Bacilli,1ZJAM@1386|Bacillus	91061|Bacilli	-	-	yodI	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02031	224308.BSU19620	2.69e-189	526.0	COG1876@1|root,COG1876@2|Bacteria,1V1F7@1239|Firmicutes,4HBR1@91061|Bacilli,1ZCAG@1386|Bacillus	91061|Bacilli	M	D-alanyl-D-alanine carboxypeptidase	yodJ	-	3.4.17.14	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	M00651	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	-	-	-	VanY
PHALIAPI_02032	224308.BSU19630	1.68e-163	457.0	COG0813@1|root,COG0813@2|Bacteria,1TQPG@1239|Firmicutes,4HADM@91061|Bacilli,1ZCBV@1386|Bacillus	91061|Bacilli	F	Purine nucleoside phosphorylase	deoD	-	2.4.2.1	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244	RC00033,RC00063,RC00122	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
PHALIAPI_02033	1382315.JPOI01000001_gene2627	2.08e-12	61.2	2EKRV@1|root,33EFM@2|Bacteria,1VQ20@1239|Firmicutes,4HSEI@91061|Bacilli,1WGZZ@129337|Geobacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02034	224308.BSU19640	1.17e-71	215.0	2FBM7@1|root,343SB@2|Bacteria,1VAAQ@1239|Firmicutes,4HYUG@91061|Bacilli,1ZIA3@1386|Bacillus	91061|Bacilli	S	YodL-like	yodL	-	-	-	-	-	-	-	-	-	-	-	YodL
PHALIAPI_02035	224308.BSU19650	2.71e-136	386.0	COG0671@1|root,COG0671@2|Bacteria,1VF2U@1239|Firmicutes,4HNXR@91061|Bacilli,1ZJJP@1386|Bacillus	91061|Bacilli	I	Acid phosphatase homologues	yodM	-	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
PHALIAPI_02036	224308.BSU19660	5.18e-34	116.0	28VRR@1|root,2ZHTJ@2|Bacteria,1W6RM@1239|Firmicutes,4IFAF@91061|Bacilli,1ZITN@1386|Bacillus	91061|Bacilli	S	YozD-like protein	yozD	-	-	-	-	-	-	-	-	-	-	-	YozD
PHALIAPI_02038	224308.BSU19670	1.29e-159	447.0	2ESB9@1|root,33JW0@2|Bacteria,1VMVV@1239|Firmicutes,4HSTZ@91061|Bacilli,1ZD8X@1386|Bacillus	91061|Bacilli	-	-	yodN	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02039	224308.BSU19680	7.3e-50	157.0	COG4479@1|root,COG4479@2|Bacteria,1VFI4@1239|Firmicutes,4HR7P@91061|Bacilli,1ZJ7C@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0346 family	yozE	-	-	-	-	-	-	-	-	-	-	-	YozE_SAM_like
PHALIAPI_02040	224308.BSU19689	3.44e-63	192.0	2FGYP@1|root,348TV@2|Bacteria,1VZPM@1239|Firmicutes,4HYBM@91061|Bacilli,1ZHW2@1386|Bacillus	91061|Bacilli	S	YokU-like protein, putative antitoxin	yokU	-	-	-	-	-	-	-	-	-	-	-	YokU
PHALIAPI_02041	224308.BSU19690	0.0	957.0	COG1509@1|root,COG1509@2|Bacteria,1TQQZ@1239|Firmicutes,4HE2P@91061|Bacilli,1ZBET@1386|Bacillus	91061|Bacilli	E	lysine 2,3-aminomutase	kamA	-	5.4.3.2	ko:K01843	ko00310,map00310	-	R00461	RC00303	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Fer4_14,LAM_C,Radical_SAM
PHALIAPI_02042	224308.BSU19700	2.93e-194	539.0	COG0454@1|root,COG0456@2|Bacteria,1V4AF@1239|Firmicutes,4HD36@91061|Bacilli,1ZCVH@1386|Bacillus	91061|Bacilli	K	Acetyltransferase (GNAT) family	yodP	-	2.3.1.264	ko:K21935	-	-	R11701	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_9
PHALIAPI_02043	224308.BSU19710	0.0	887.0	COG0624@1|root,COG0624@2|Bacteria,1TQS9@1239|Firmicutes,4HDHW@91061|Bacilli,1ZBDC@1386|Bacillus	91061|Bacilli	E	Acetylornithine deacetylase	yodQ	-	3.5.1.16,3.5.1.18	ko:K01438,ko:K01439	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R00669,R02734,R09107	RC00064,RC00090,RC00300	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
PHALIAPI_02044	224308.BSU19720	7.76e-152	427.0	COG2057@1|root,COG2057@2|Bacteria,1TNY5@1239|Firmicutes,4HBFR@91061|Bacilli,1ZB4Q@1386|Bacillus	91061|Bacilli	I	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit	atoA	-	2.8.3.8,2.8.3.9	ko:K01035	ko00310,ko00627,ko00640,ko00650,ko01100,ko01120,ko02020,map00310,map00627,map00640,map00650,map01100,map01120,map02020	-	R01179,R01359,R01365,R07832	RC00012,RC00014	ko00000,ko00001,ko01000	-	-	-	CoA_trans
PHALIAPI_02045	224308.BSU19730	6.6e-159	446.0	COG1788@1|root,COG1788@2|Bacteria,1TSZT@1239|Firmicutes,4HDJG@91061|Bacilli,1ZQEH@1386|Bacillus	91061|Bacilli	I	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit	atoD	-	2.8.3.8,2.8.3.9	ko:K01034	ko00310,ko00627,ko00640,ko00650,ko01100,ko01120,ko02020,map00310,map00627,map00640,map00650,map01100,map01120,map02020	-	R01179,R01359,R01365,R07832	RC00012,RC00014	ko00000,ko00001,ko01000	-	-	-	CoA_trans
PHALIAPI_02046	224308.BSU19740	9.46e-315	858.0	COG0161@1|root,COG0161@2|Bacteria,1TP9N@1239|Firmicutes,4HD8E@91061|Bacilli,1ZAWS@1386|Bacillus	91061|Bacilli	H	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	yodT	-	-	-	-	-	-	-	-	-	-	-	Aminotran_3
PHALIAPI_02048	224308.BSU19750	2.4e-185	515.0	COG0454@1|root,COG0456@2|Bacteria	2|Bacteria	K	acetyltransferase	yiiD	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006473,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:1901564	-	ko:K06323	-	-	-	-	ko00000	-	-	-	Acetyltransf_1,Acetyltransf_10,YiiD_C
PHALIAPI_02049	224308.BSU19760	0.0	881.0	COG0463@1|root,COG0463@2|Bacteria,1VT8J@1239|Firmicutes,4HU2T@91061|Bacilli,1ZBH8@1386|Bacillus	91061|Bacilli	M	maturation of the outermost layer of the spore	cgeD	-	-	ko:K06322	-	-	-	-	ko00000	-	-	-	Glycos_transf_2
PHALIAPI_02050	224308.BSU19770	1.06e-59	184.0	29RRN@1|root,30CVA@2|Bacteria,1UAEY@1239|Firmicutes,4IKT8@91061|Bacilli,1ZHGH@1386|Bacillus	91061|Bacilli	-	-	cgeC	-	-	ko:K06321	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_02051	224308.BSU19780	1.26e-82	245.0	29RIJ@1|root,30CMI@2|Bacteria,1UA3F@1239|Firmicutes,4IKD5@91061|Bacilli,1ZGHQ@1386|Bacillus	91061|Bacilli	-	-	cgeA	-	-	ko:K06319	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_02052	224308.BSU19790	2.69e-227	626.0	COG4641@1|root,COG4641@2|Bacteria,1TQNB@1239|Firmicutes,4HBH5@91061|Bacilli,1ZF3Y@1386|Bacillus	91061|Bacilli	S	Spore maturation protein	cgeB	-	-	ko:K06320	-	-	-	-	ko00000	-	-	-	DUF3880,Glyco_trans_1_2
PHALIAPI_02053	224308.BSU19800	2.31e-279	763.0	COG4247@1|root,COG4247@2|Bacteria,1VRJS@1239|Firmicutes,4HV5E@91061|Bacilli,1ZM0Y@1386|Bacillus	91061|Bacilli	I	Myo-inositol-hexaphosphate 3-phosphohydrolase	phy	-	3.1.3.8	ko:K01083	ko00562,map00562	-	R03371	RC00078	ko00000,ko00001,ko01000	-	-	-	Cu_amine_oxidN1,Phytase
PHALIAPI_02054	315750.BPUM_1899	1.66e-157	451.0	COG1086@1|root,COG1086@2|Bacteria,1TR3W@1239|Firmicutes,4HAER@91061|Bacilli,1ZB9K@1386|Bacillus	91061|Bacilli	GM	Polysaccharide biosynthesis protein	-	-	-	ko:K19421	-	-	-	-	ko00000	-	-	-	CoA_binding_3,Polysacc_synt_2
PHALIAPI_02055	224308.BSU21680	7.13e-103	297.0	COG0229@1|root,COG0229@2|Bacteria,1UPN0@1239|Firmicutes,4HGWN@91061|Bacilli,1ZFQG@1386|Bacillus	91061|Bacilli	O	peptide methionine sulfoxide reductase	msrB	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
PHALIAPI_02056	224308.BSU21690	9.83e-133	375.0	COG0225@1|root,COG0225@2|Bacteria,1TQ3E@1239|Firmicutes,4HAIV@91061|Bacilli,1ZCC5@1386|Bacillus	91061|Bacilli	O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine	msrB	-	1.8.4.11,1.8.4.12	ko:K07304,ko:K12267	-	-	-	-	ko00000,ko01000	-	-	-	PMSR,SelR
PHALIAPI_02057	224308.BSU21700	4.14e-94	275.0	COG1846@1|root,COG1846@2|Bacteria,1V3P7@1239|Firmicutes,4HPNY@91061|Bacilli,1ZHZC@1386|Bacillus	91061|Bacilli	K	transcriptional	ypoP	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_02058	224308.BSU21710	3.33e-288	791.0	COG0534@1|root,COG0534@2|Bacteria,1TNZN@1239|Firmicutes,4HANM@91061|Bacilli,1ZEAW@1386|Bacillus	91061|Bacilli	V	MATE efflux family protein	mepA	-	-	-	-	-	-	-	-	-	-	-	MatE
PHALIAPI_02059	224308.BSU21720	2.13e-40	133.0	29RUY@1|root,30CYZ@2|Bacteria,1UAK7@1239|Firmicutes,4IKYV@91061|Bacilli,1ZIEX@1386|Bacillus	91061|Bacilli	S	Uncharacterized ympT	ypmT	-	-	-	-	-	-	-	-	-	-	-	ypmT
PHALIAPI_02060	224308.BSU21730	1.13e-127	363.0	COG4698@1|root,COG4698@2|Bacteria,1VF0K@1239|Firmicutes,4HIYN@91061|Bacilli,1ZF26@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ypmS	-	-	-	-	-	-	-	-	-	-	-	DUF2140
PHALIAPI_02061	224308.BSU21740	5.21e-178	496.0	COG2755@1|root,COG2755@2|Bacteria,1V1HR@1239|Firmicutes,4HDXS@91061|Bacilli,1ZRET@1386|Bacillus	91061|Bacilli	E	GDSL-like Lipase/Acylhydrolase	ypmR	GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0016298,GO:0016787,GO:0016788,GO:0052689	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
PHALIAPI_02062	224308.BSU21750	3.23e-139	393.0	COG1999@1|root,COG1999@2|Bacteria,1V03J@1239|Firmicutes,4HET3@91061|Bacilli,1ZFJQ@1386|Bacillus	91061|Bacilli	S	protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems	ypmQ	-	-	ko:K07152	-	-	-	-	ko00000,ko03029	-	-	-	SCO1-SenC
PHALIAPI_02063	224308.BSU21760	1.28e-54	170.0	2E2C2@1|root,32XH4@2|Bacteria,1VDJY@1239|Firmicutes,4HMBA@91061|Bacilli,1ZIXP@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2535)	ypmP	-	-	-	-	-	-	-	-	-	-	-	DUF2535
PHALIAPI_02064	224308.BSU21770	2.46e-308	840.0	COG1171@1|root,COG1171@2|Bacteria,1TP22@1239|Firmicutes,4H9NK@91061|Bacilli,1ZBM0@1386|Bacillus	91061|Bacilli	E	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA	ilvA	GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP,Thr_dehydrat_C
PHALIAPI_02065	224308.BSU21780	1.75e-230	635.0	COG1221@1|root,COG1221@2|Bacteria,1VSHE@1239|Firmicutes,4ISX2@91061|Bacilli,1ZEVI@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yplP	-	-	-	-	-	-	-	-	-	-	-	HTH_12,Sigma54_activ_2,Sigma54_activat
PHALIAPI_02066	224308.BSU21790	8.03e-143	404.0	COG1272@1|root,COG1272@2|Bacteria,1TSFK@1239|Firmicutes,4HAT2@91061|Bacilli,1ZBJJ@1386|Bacillus	91061|Bacilli	S	protein, Hemolysin III	yplQ	-	-	ko:K11068	-	-	-	-	ko00000,ko02042	-	-	-	HlyIII
PHALIAPI_02067	224308.BSU21800	6.68e-143	403.0	COG0204@1|root,COG0204@2|Bacteria,1UMJA@1239|Firmicutes,4HD2E@91061|Bacilli,1ZEYG@1386|Bacillus	91061|Bacilli	I	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family	ypkP	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
PHALIAPI_02068	224308.BSU21810	1.93e-121	346.0	COG0262@1|root,COG0262@2|Bacteria,1VB80@1239|Firmicutes,4HIGJ@91061|Bacilli,1ZG71@1386|Bacillus	91061|Bacilli	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis	dfrA	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	DHFR_1
PHALIAPI_02069	224308.BSU21820	1.65e-199	551.0	COG0207@1|root,COG0207@2|Bacteria,1TSIR@1239|Firmicutes,4H9QS@91061|Bacilli,1ZAUT@1386|Bacillus	91061|Bacilli	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	thyA	GO:0003674,GO:0003824,GO:0004799,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046385,GO:0046483,GO:0055086,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576	2.1.1.45	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	M00053	R02101	RC00219,RC00332	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylat_synt
PHALIAPI_02070	1051501.AYTL01000030_gene2349	1.48e-119	342.0	COG1267@1|root,COG1267@2|Bacteria,1V3I0@1239|Firmicutes,4HH4Y@91061|Bacilli,1ZCY9@1386|Bacillus	91061|Bacilli	I	COG1267 Phosphatidylglycerophosphatase A and related proteins	ltrC	-	3.1.3.27	ko:K01095	ko00564,ko01100,map00564,map01100	-	R02029	RC00017	ko00000,ko00001,ko01000	-	-	-	PgpA
PHALIAPI_02071	224308.BSU21840	3.47e-148	416.0	2C2Z4@1|root,2ZV7K@2|Bacteria,1V3JN@1239|Firmicutes,4HHVS@91061|Bacilli,1ZGAN@1386|Bacillus	91061|Bacilli	S	YpjP-like protein	ypjP	-	-	-	-	-	-	-	-	-	-	-	YpjP
PHALIAPI_02072	224308.BSU21850	9.39e-182	506.0	COG2136@1|root,COG2521@1|root,COG2136@2|Bacteria,COG2521@2|Bacteria,1UIYD@1239|Firmicutes,4ISX3@91061|Bacilli,1ZS7M@1386|Bacillus	91061|Bacilli	AJ	Putative SAM-dependent methyltransferase	ypiP	-	-	-	-	-	-	-	-	-	-	-	SAM_MT
PHALIAPI_02073	224308.BSU21860	9.69e-99	286.0	28NYH@1|root,2ZBVN@2|Bacteria,1V1T3@1239|Firmicutes,4HHZS@91061|Bacilli,1ZGM0@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0403 family	yphP	-	-	-	-	-	-	-	-	-	-	-	Disulph_isomer
PHALIAPI_02074	224308.BSU21870	0.0	1108.0	COG0129@1|root,COG0129@2|Bacteria,1TP1R@1239|Firmicutes,4H9ZG@91061|Bacilli,1ZASK@1386|Bacillus	91061|Bacilli	E	Belongs to the IlvD Edd family	ilvD	-	4.2.1.9	ko:K01687,ko:K16786	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00770,map01100,map01110,map01130,map01210,map01230,map02010	M00019,M00570,M00582	R01209,R04441,R05070	RC00468,RC01714	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35	-	-	ILVD_EDD
PHALIAPI_02075	1121090.KB894688_gene1624	5.12e-252	700.0	COG3039@1|root,COG3039@2|Bacteria,1TPFS@1239|Firmicutes,4H9V9@91061|Bacilli,1ZDIP@1386|Bacillus	91061|Bacilli	L	COG3666 Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1,DDE_Tnp_1_6,DUF772
PHALIAPI_02076	224308.BSU21880	6.98e-205	574.0	COG1413@1|root,COG1413@2|Bacteria,1TRJT@1239|Firmicutes,4HBFD@91061|Bacilli,1ZB7F@1386|Bacillus	91061|Bacilli	C	COG0694 Thioredoxin-like proteins and domains	ypgR	-	-	-	-	-	-	-	-	-	-	-	HEAT_2,HEAT_PBS,Nfu_N,Virulence_fact
PHALIAPI_02077	224308.BSU21890	1.75e-133	379.0	COG1418@1|root,COG1418@2|Bacteria,1V7IZ@1239|Firmicutes,4HIVB@91061|Bacilli,1ZB0E@1386|Bacillus	91061|Bacilli	S	phosphohydrolase	yagB	-	-	ko:K06950	-	-	-	-	ko00000	-	-	-	HD
PHALIAPI_02078	224308.BSU21900	7.69e-115	328.0	COG0386@1|root,COG0386@2|Bacteria,1V3M3@1239|Firmicutes,4HH5Q@91061|Bacilli,1ZGBN@1386|Bacillus	91061|Bacilli	O	Belongs to the glutathione peroxidase family	bsaA	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
PHALIAPI_02079	224308.BSU21910	1.28e-226	623.0	COG1897@1|root,COG1897@2|Bacteria,1TQVR@1239|Firmicutes,4H9W4@91061|Bacilli,1ZCTU@1386|Bacillus	91061|Bacilli	E	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine	metAA	GO:0003674,GO:0003824,GO:0008374,GO:0008899,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750	2.3.1.46	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	M00017	R01777	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	HTS
PHALIAPI_02080	224308.BSU21920	3.67e-276	755.0	COG0707@1|root,COG0707@2|Bacteria,1TR07@1239|Firmicutes,4HBKJ@91061|Bacilli,1ZQUQ@1386|Bacillus	91061|Bacilli	M	Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)	ugtP	GO:0003674,GO:0003824,GO:0008194,GO:0016740,GO:0016757,GO:0016758,GO:0035251,GO:0046527,GO:0047228	2.4.1.315	ko:K03429	ko00561,ko01100,map00561,map01100	-	R02689,R04377	RC00005,RC00059	ko00000,ko00001,ko01000,ko01003	-	GT28	-	Glyco_tran_28_C,Glycos_transf_1,MGDG_synth
PHALIAPI_02081	224308.BSU21930	2.54e-42	138.0	COG1278@1|root,COG1278@2|Bacteria,1VEE0@1239|Firmicutes,4HNJC@91061|Bacilli,1ZHTU@1386|Bacillus	91061|Bacilli	K	Cold-shock protein	cspD	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
PHALIAPI_02082	1274524.BSONL12_01472	1.17e-22	88.2	29S43@1|root,30D8J@2|Bacteria,1UAZQ@1239|Firmicutes,4IMCJ@91061|Bacilli,1ZJT7@1386|Bacillus	91061|Bacilli	-	-	degR	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02083	1051501.AYTL01000030_gene2361	2.13e-40	135.0	29S2J@1|root,30D72@2|Bacteria,1UAXW@1239|Firmicutes,4IMAQ@91061|Bacilli,1ZJNM@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2564)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2564
PHALIAPI_02084	224308.BSU21960	4.64e-40	132.0	2E6UK@1|root,331EA@2|Bacteria,1VF2M@1239|Firmicutes,4HPQ1@91061|Bacilli,1ZKC4@1386|Bacillus	91061|Bacilli	S	Zinc-finger	ypeQ	-	-	-	-	-	-	-	-	-	-	-	zf-C2HCIx2C
PHALIAPI_02085	224308.BSU21970	5.46e-161	451.0	COG0328@1|root,COG0328@2|Bacteria,1V3K2@1239|Firmicutes,4HE8H@91061|Bacilli,1ZDMZ@1386|Bacillus	91061|Bacilli	L	COG0328 Ribonuclease HI	ypeP	-	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RVT_3
PHALIAPI_02086	224308.BSU21980	2.68e-135	385.0	COG1738@1|root,COG1738@2|Bacteria,1TSAY@1239|Firmicutes,4HB9T@91061|Bacilli,1ZEKB@1386|Bacillus	91061|Bacilli	S	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage	ypdP	-	-	ko:K09125	-	-	-	-	ko00000	-	-	-	Vut_1
PHALIAPI_02087	224308.BSU21990	1.54e-87	257.0	COG0328@1|root,COG0328@2|Bacteria,1VE23@1239|Firmicutes,4HKXV@91061|Bacilli,1ZQJB@1386|Bacillus	91061|Bacilli	L	Ribonuclease	rnhA	-	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RVT_3
PHALIAPI_02088	315750.BPUM_1936	5.23e-05	42.4	29S9K@1|root,30DE3@2|Bacteria,1UB6V@1239|Firmicutes,4IMJJ@91061|Bacilli,1ZKAQ@1386|Bacillus	91061|Bacilli	-	-	-	-	-	ko:K06429	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_02089	224308.BSU22010	1.08e-211	585.0	COG0258@1|root,COG0258@2|Bacteria,1TQ05@1239|Firmicutes,4H9UW@91061|Bacilli,1ZB2Z@1386|Bacillus	91061|Bacilli	L	5'3' exonuclease	ypcP	-	-	-	-	-	-	-	-	-	-	-	5_3_exonuc,5_3_exonuc_N
PHALIAPI_02090	279010.BL00672	1.08e-11	59.7	2DNYK@1|root,32ZT6@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02091	224308.BSU22020	3.35e-51	162.0	2E0UC@1|root,32WBV@2|Bacteria,1VDJ2@1239|Firmicutes,4HKXT@91061|Bacilli,1ZJ5C@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2533)	ypbS	-	-	-	-	-	-	-	-	-	-	-	DUF2533
PHALIAPI_02092	224308.BSU22030	0.0	2221.0	COG0699@1|root,COG0699@2|Bacteria,1TR0Q@1239|Firmicutes,4HBAC@91061|Bacilli,1ZAXM@1386|Bacillus	91061|Bacilli	S	Dynamin family	ypbR	GO:0000910,GO:0003674,GO:0003824,GO:0003924,GO:0005575,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022402,GO:0022607,GO:0031224,GO:0032506,GO:0044085,GO:0044425,GO:0051301,GO:0071840,GO:0090529	-	-	-	-	-	-	-	-	-	-	Dynamin_N
PHALIAPI_02094	224308.BSU22040	3.33e-113	325.0	COG1755@1|root,COG1755@2|Bacteria,1V6IY@1239|Firmicutes,4HIFN@91061|Bacilli,1ZGT0@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ypbQ	-	-	ko:K16168	-	-	-	-	ko00000,ko01008	-	-	-	ICMT
PHALIAPI_02095	224308.BSU22050	6.2e-264	723.0	COG3424@1|root,COG3424@2|Bacteria,1TPUK@1239|Firmicutes,4HBHH@91061|Bacilli,1ZC8W@1386|Bacillus	91061|Bacilli	Q	Naringenin-chalcone synthase	bcsA	-	-	ko:K16167	-	-	-	-	ko00000,ko01008	-	-	-	Chal_sti_synt_C,Chal_sti_synt_N
PHALIAPI_02096	224308.BSU22060	5.8e-290	795.0	COG2233@1|root,COG2233@2|Bacteria,1TNZZ@1239|Firmicutes,4HBAM@91061|Bacilli,1ZAUK@1386|Bacillus	91061|Bacilli	F	xanthine	pbuX	GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823	-	ko:K03458,ko:K16169,ko:K16170	-	-	-	-	ko00000,ko02000	2.A.40,2.A.40.3.1,2.A.40.3.2	-	iSB619.SA_RS02140	Xan_ur_permease
PHALIAPI_02097	224308.BSU22070	5.51e-127	362.0	COG0503@1|root,COG0503@2|Bacteria,1V1DU@1239|Firmicutes,4HFNW@91061|Bacilli,1ZFTS@1386|Bacillus	91061|Bacilli	F	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis	xpt	-	2.4.2.22	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	-	R01229,R02142	RC00063,RC00122	ko00000,ko00001,ko01000	-	-	iYO844.BSU22070	Pribosyltran
PHALIAPI_02098	224308.BSU22080	0.0	1007.0	COG2317@1|root,COG2317@2|Bacteria,1TPS6@1239|Firmicutes,4HAPE@91061|Bacilli,1ZB3X@1386|Bacillus	91061|Bacilli	E	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues	ypwA	GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005488,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.17.19	ko:K01299	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M32
PHALIAPI_02099	224308.BSU22090	2.07e-217	602.0	28H7K@1|root,2Z7JT@2|Bacteria,1UPH1@1239|Firmicutes,4HE88@91061|Bacilli,1ZDHF@1386|Bacillus	91061|Bacilli	P	The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system	kdgT	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02526	-	-	-	-	ko00000,ko02000	2.A.10.1	-	-	KdgT
PHALIAPI_02100	224308.BSU22100	1.47e-132	376.0	COG0800@1|root,COG0800@2|Bacteria,1TS0F@1239|Firmicutes,4HG4G@91061|Bacilli,1ZEB4@1386|Bacillus	91061|Bacilli	G	2-dehydro-3-deoxy-phosphogluconate aldolase	kdgA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	4.1.2.14,4.1.3.42	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	M00008,M00061,M00308,M00631	R00470,R05605	RC00307,RC00308,RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase
PHALIAPI_02101	224308.BSU22110	1.15e-236	650.0	COG0524@1|root,COG0524@2|Bacteria,1TRRY@1239|Firmicutes,4HBH6@91061|Bacilli,1ZC46@1386|Bacillus	91061|Bacilli	G	COG0524 Sugar kinases, ribokinase family	kdgK	-	2.7.1.45	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	M00061,M00308,M00631	R01541	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PfkB
PHALIAPI_02102	224308.BSU22120	4.51e-237	652.0	COG1609@1|root,COG1609@2|Bacteria,1TQSY@1239|Firmicutes,4HAJI@91061|Bacilli,1ZEA9@1386|Bacillus	91061|Bacilli	K	transcriptional	kdgR	-	-	ko:K02525	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
PHALIAPI_02103	224308.BSU22130	9.9e-202	558.0	COG3717@1|root,COG3717@2|Bacteria,1VSXE@1239|Firmicutes,4HU2K@91061|Bacilli,1ZQMN@1386|Bacillus	91061|Bacilli	G	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate	kduI	-	5.3.1.17	ko:K01815	ko00040,map00040	-	R04383	RC00541	ko00000,ko00001,ko01000	-	-	-	KduI
PHALIAPI_02104	224308.BSU22140	5.4e-175	488.0	COG1028@1|root,COG1028@2|Bacteria,1TPZ8@1239|Firmicutes,4HAMW@91061|Bacilli,1ZC4X@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	kduD	-	1.1.1.127	ko:K00065	ko00040,map00040	-	R01542	RC00089	ko00000,ko00001,ko01000	-	-	-	adh_short,adh_short_C2
PHALIAPI_02105	224308.BSU22150	0.0	1270.0	COG1199@1|root,COG1199@2|Bacteria,1TRNV@1239|Firmicutes,4HBYD@91061|Bacilli,1ZARY@1386|Bacillus	91061|Bacilli	KL	COG1199 Rad3-related DNA helicases	ypvA	-	3.6.4.12	ko:K03722	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	Helicase_C_2
PHALIAPI_02107	224308.BSU22170	4.71e-285	778.0	COG0116@1|root,COG0116@2|Bacteria,1TP0X@1239|Firmicutes,4HBKY@91061|Bacilli,1ZBJB@1386|Bacillus	91061|Bacilli	L	Belongs to the methyltransferase superfamily	ypsC	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	-	ko:K07444	-	-	-	-	ko00000,ko01000	-	-	-	THUMP,UPF0020
PHALIAPI_02108	224308.BSU22180	2.97e-60	186.0	COG3599@1|root,COG3599@2|Bacteria,1VEQ4@1239|Firmicutes,4HKUX@91061|Bacilli,1ZH10@1386|Bacillus	91061|Bacilli	D	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation	gpsB	-	-	-	-	-	-	-	-	-	-	-	DivIVA
PHALIAPI_02109	224308.BSU22190	5.9e-129	366.0	COG4474@1|root,COG4474@2|Bacteria,1V6SM@1239|Firmicutes,4HJGM@91061|Bacilli,1ZFYS@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0398 family	ypsA	-	-	-	-	-	-	-	-	-	-	-	DUF1273
PHALIAPI_02110	224308.BSU22210	1.56e-295	806.0	COG3359@1|root,COG3359@2|Bacteria,1TQQU@1239|Firmicutes,4HDMU@91061|Bacilli,1ZAZQ@1386|Bacillus	91061|Bacilli	L	RNase_H superfamily	yprB	-	-	ko:K07502	-	-	-	-	ko00000	-	-	-	RNase_H_2
PHALIAPI_02111	224308.BSU22220	0.0	1493.0	COG1111@1|root,COG1205@1|root,COG1111@2|Bacteria,COG1205@2|Bacteria,1TSPA@1239|Firmicutes,4H9T2@91061|Bacilli,1ZDM5@1386|Bacillus	91061|Bacilli	L	COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster	yprA	GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360	-	ko:K06877	-	-	-	-	ko00000	-	-	-	DEAD,DUF1998,Helicase_C
PHALIAPI_02112	224308.BSU22230	5.3e-110	317.0	COG2190@1|root,COG2190@2|Bacteria,1VAEB@1239|Firmicutes,4HIPR@91061|Bacilli,1ZG91@1386|Bacillus	91061|Bacilli	G	COG2190 Phosphotransferase system IIA components	ypqE	-	-	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	M00265,M00266,M00268,M00270,M00272,M00303,M00806	R02738,R02780,R04111,R04394,R05132,R08559	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.1	-	-	PTS_EIIA_1
PHALIAPI_02113	224308.BSU22240	1.24e-94	276.0	COG0071@1|root,COG0071@2|Bacteria	2|Bacteria	O	Belongs to the small heat shock protein (HSP20) family	hspX	GO:0001666,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016310,GO:0019538,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0036294,GO:0040007,GO:0040008,GO:0042221,GO:0042594,GO:0043170,GO:0043207,GO:0043412,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045926,GO:0046777,GO:0048519,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0065007,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0071496,GO:0071704,GO:0071944,GO:0075136,GO:1901564	-	ko:K06335,ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
PHALIAPI_02114	224308.BSU22250	1.45e-66	204.0	29NR8@1|root,309P6@2|Bacteria,1U5F9@1239|Firmicutes,4IF6W@91061|Bacilli,1ZJ7A@1386|Bacillus	91061|Bacilli	S	YppG-like protein	yppG	-	-	-	-	-	-	-	-	-	-	-	YppG
PHALIAPI_02115	935836.JAEL01000006_gene2795	9.21e-11	58.5	2ETMY@1|root,33M5Q@2|Bacteria,1VPZB@1239|Firmicutes,4HR2S@91061|Bacilli,1ZKDZ@1386|Bacillus	91061|Bacilli	S	YppF-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YppF
PHALIAPI_02116	545693.BMQ_1406	2e-10	61.2	2C8E7@1|root,32RKZ@2|Bacteria,1VIES@1239|Firmicutes,4HKFC@91061|Bacilli,1ZITF@1386|Bacillus	91061|Bacilli	S	Bacterial domain of unknown function (DUF1798)	yppE	-	-	-	-	-	-	-	-	-	-	-	DUF1798
PHALIAPI_02119	224308.BSU22300	2.52e-238	654.0	28MSG@1|root,2ZB0U@2|Bacteria,1TT1H@1239|Firmicutes,4HBNQ@91061|Bacilli,1ZCHW@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2515)	yppC	-	-	-	-	-	-	-	-	-	-	-	DUF2515
PHALIAPI_02120	224308.BSU22310	3.2e-150	422.0	COG3331@1|root,COG3331@2|Bacteria,1V3S4@1239|Firmicutes,4HGZ7@91061|Bacilli,1ZCV9@1386|Bacillus	91061|Bacilli	L	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	recU	GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360	-	ko:K03700	-	-	-	-	ko00000,ko03400	-	-	-	RecU
PHALIAPI_02121	224308.BSU22320	0.0	1461.0	COG0744@1|root,COG4499@1|root,COG0744@2|Bacteria,COG4499@2|Bacteria,1TPM5@1239|Firmicutes,4H9SA@91061|Bacilli,1ZAXY@1386|Bacillus	91061|Bacilli	M	penicillin-binding protein	ponA	GO:0005575,GO:0005576	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase,fn3
PHALIAPI_02122	224308.BSU22330	1.67e-120	343.0	2EGVD@1|root,33AMM@2|Bacteria,1VKVK@1239|Firmicutes,4HRYS@91061|Bacilli,1ZITC@1386|Bacillus	91061|Bacilli	-	-	ypoC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02123	224308.BSU22340	1.02e-157	442.0	COG0177@1|root,COG0177@2|Bacteria,1TRAK@1239|Firmicutes,4HATD@91061|Bacilli,1ZBJE@1386|Bacillus	91061|Bacilli	L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate	nth	-	4.2.99.18	ko:K10773	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD
PHALIAPI_02124	224308.BSU22350	6.62e-165	461.0	COG3935@1|root,COG3935@2|Bacteria,1V283@1239|Firmicutes,4HFP3@91061|Bacilli,1ZC34@1386|Bacillus	91061|Bacilli	L	DNA replication protein DnaD	dnaD	-	-	ko:K02086	-	-	-	-	ko00000	-	-	-	DnaB_2,HTH_36
PHALIAPI_02125	224308.BSU22360	0.0	871.0	COG0017@1|root,COG0017@2|Bacteria,1TP38@1239|Firmicutes,4H9YH@91061|Bacilli,1ZC51@1386|Bacillus	91061|Bacilli	J	asparaginyl-tRNA	asnS	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	6.1.1.22	ko:K01893	ko00970,map00970	M00359,M00360	R03648	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon
PHALIAPI_02126	224308.BSU22370	1.78e-284	777.0	COG0436@1|root,COG0436@2|Bacteria,1TP0J@1239|Firmicutes,4HA13@91061|Bacilli,1ZCMB@1386|Bacillus	91061|Bacilli	E	Aminotransferase	aspB	GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769,GO:0047297	2.6.1.1,2.6.1.14	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R01346,R02433,R02619,R05052	RC00006,RC00025	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
PHALIAPI_02127	224308.BSU22380	5.36e-102	296.0	COG5353@1|root,COG5353@2|Bacteria,1VA2H@1239|Firmicutes,4HNMM@91061|Bacilli,1ZFVJ@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ypmB	-	-	-	-	-	-	-	-	-	-	-	PepSY
PHALIAPI_02128	1051501.AYTL01000030_gene2405	1.52e-32	112.0	2E85E@1|root,332IZ@2|Bacteria,1VHMN@1239|Firmicutes,4HPYR@91061|Bacilli,1ZIUT@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF4264)	ypmA	-	-	-	-	-	-	-	-	-	-	-	DUF4264
PHALIAPI_02129	224308.BSU22400	0.0	1827.0	COG0847@1|root,COG1199@1|root,COG0847@2|Bacteria,COG1199@2|Bacteria,1TQHQ@1239|Firmicutes,4HB2Y@91061|Bacilli,1ZAWI@1386|Bacillus	91061|Bacilli	L	helicase involved in DNA repair and perhaps also replication	dinG	-	3.6.4.12	ko:K03722	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DEAD,Helicase_C_2,RNase_T,ResIII
PHALIAPI_02130	224308.BSU22410	4.16e-85	251.0	COG0853@1|root,COG0853@2|Bacteria,1V6NQ@1239|Firmicutes,4HIV1@91061|Bacilli,1ZG9V@1386|Bacillus	91061|Bacilli	H	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine	panD	-	4.1.1.11	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R00489	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Asp_decarbox
PHALIAPI_02131	224308.BSU22420	1.29e-198	551.0	COG0414@1|root,COG0414@2|Bacteria,1TP7A@1239|Firmicutes,4HAIQ@91061|Bacilli,1ZAV5@1386|Bacillus	91061|Bacilli	H	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate	panC	GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605	6.3.2.1	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R02473	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_ligase
PHALIAPI_02132	224308.BSU22430	4.85e-194	538.0	COG0413@1|root,COG0413@2|Bacteria,1TPZA@1239|Firmicutes,4H9S8@91061|Bacilli,1ZAWV@1386|Bacillus	91061|Bacilli	H	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate	panB	-	2.1.2.11	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R01226	RC00022,RC00200	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU22430	Pantoate_transf
PHALIAPI_02133	224308.BSU22440	4e-233	641.0	COG0340@1|root,COG1654@1|root,COG0340@2|Bacteria,COG1654@2|Bacteria,1TQCU@1239|Firmicutes,4HB60@91061|Bacilli,1ZBI9@1386|Bacillus	91061|Bacilli	K	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor	birA	-	6.3.4.15	ko:K03524	ko00780,ko01100,map00780,map01100	-	R01074,R05145	RC00043,RC00070,RC00096,RC02896	ko00000,ko00001,ko01000,ko03000	-	-	-	BPL_C,BPL_LplA_LipB,HTH_11
PHALIAPI_02134	224308.BSU22450	3.7e-279	764.0	COG0617@1|root,COG0617@2|Bacteria,1TQ2A@1239|Firmicutes,4HB2W@91061|Bacilli,1ZC20@1386|Bacillus	91061|Bacilli	J	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate	cca	-	2.7.7.72	ko:K00974	ko03013,map03013	-	R09382,R09383,R09384,R09386	RC00078	ko00000,ko00001,ko01000,ko03016	-	-	-	PolyA_pol,PolyA_pol_RNAbd,tRNA_NucTran2_2
PHALIAPI_02135	224308.BSU22460	2.34e-265	727.0	COG0438@1|root,COG0438@2|Bacteria,1TPS8@1239|Firmicutes,4HA43@91061|Bacilli,1ZASJ@1386|Bacillus	91061|Bacilli	M	N-acetyl-alpha-D-glucosaminyl L-malate synthase	bshA	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	ko:K00754	-	-	-	-	ko00000,ko01000	-	GT4	-	Glyco_transf_4,Glycos_transf_1
PHALIAPI_02136	224308.BSU22470	1.89e-166	465.0	COG2120@1|root,COG2120@2|Bacteria,1TV10@1239|Firmicutes,4HFJQ@91061|Bacilli,1ZAZI@1386|Bacillus	91061|Bacilli	S	proteins, LmbE homologs	bshB1	-	-	ko:K01463	-	-	-	-	ko00000,ko01000	-	-	-	PIG-L
PHALIAPI_02137	224308.BSU22480	2.52e-93	272.0	COG1803@1|root,COG1803@2|Bacteria,1V3KQ@1239|Firmicutes,4HH64@91061|Bacilli,1ZGAF@1386|Bacillus	91061|Bacilli	G	methylglyoxal synthase	mgsA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576	4.2.3.3	ko:K01734	ko00640,ko01120,map00640,map01120	-	R01016	RC00424	ko00000,ko00001,ko01000	-	-	-	MGS
PHALIAPI_02138	224308.BSU22490	8.04e-188	522.0	COG0289@1|root,COG0289@2|Bacteria,1TR9D@1239|Firmicutes,4HA5X@91061|Bacilli,1ZAWD@1386|Bacillus	91061|Bacilli	E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate	dapB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU22490	DapB_C,DapB_N
PHALIAPI_02139	224308.BSU22500	1.01e-73	221.0	COG1694@1|root,COG1694@2|Bacteria,1V701@1239|Firmicutes,4HISK@91061|Bacilli,1ZH1U@1386|Bacillus	91061|Bacilli	S	Nucleotide pyrophosphohydrolase	ypjD	-	-	-	-	-	-	-	-	-	-	-	MazG
PHALIAPI_02140	224308.BSU22510	3.7e-200	555.0	COG1284@1|root,COG1284@2|Bacteria,1TRAU@1239|Firmicutes,4H9UY@91061|Bacilli,1ZBUC@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein conserved in bacteria (DUF2179)	ypjC	-	-	-	-	-	-	-	-	-	-	-	DUF2179,YitT_membrane
PHALIAPI_02141	224308.BSU22520	5.62e-182	507.0	28RMR@1|root,2ZE0H@2|Bacteria,1V1HS@1239|Firmicutes,4HFRG@91061|Bacilli,1ZANV@1386|Bacillus	91061|Bacilli	S	sporulation protein	ypjB	-	-	-	-	-	-	-	-	-	-	-	Spore_YpjB
PHALIAPI_02142	1051501.AYTL01000030_gene2419	3.84e-124	355.0	COG4347@1|root,COG4347@2|Bacteria,1V1NI@1239|Firmicutes,4HFTW@91061|Bacilli,1ZFJF@1386|Bacillus	91061|Bacilli	S	membrane	ypjA	-	-	-	-	-	-	-	-	-	-	-	DUF1405
PHALIAPI_02143	224308.BSU22540	3.31e-190	527.0	COG1290@1|root,COG2010@1|root,COG1290@2|Bacteria,COG2010@2|Bacteria,1TRS8@1239|Firmicutes,4H9XH@91061|Bacilli,1ZCZW@1386|Bacillus	91061|Bacilli	C	Menaquinol-cytochrome c reductase cytochrome b c subunit	qcrC	-	-	ko:K03888	ko00190,ko01100,map00190,map01100	M00151	-	-	ko00000,ko00001,ko00002	-	-	-	Cytochrom_B_C,Cytochrome_CBB3
PHALIAPI_02144	1051501.AYTL01000030_gene2421	8.76e-166	462.0	COG1290@1|root,COG1290@2|Bacteria,1TP6M@1239|Firmicutes,4H9XV@91061|Bacilli,1ZB3U@1386|Bacillus	91061|Bacilli	C	COG1290 Cytochrome b subunit of the bc complex	qcrB	-	-	ko:K03887	ko00190,ko01100,map00190,map01100	M00151	-	-	ko00000,ko00001,ko00002	-	-	-	Cytochrome_B
PHALIAPI_02145	224308.BSU22560	3.35e-126	358.0	COG0723@1|root,COG0723@2|Bacteria,1TQUH@1239|Firmicutes,4HBX1@91061|Bacilli,1ZFNX@1386|Bacillus	91061|Bacilli	C	Menaquinol-cytochrome c reductase	qcrA	-	-	ko:K03886	ko00190,ko01100,map00190,map01100	M00151	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	CytB6-F_Fe-S,Rieske
PHALIAPI_02146	224308.BSU22570	3.21e-99	288.0	2CSPZ@1|root,32SRK@2|Bacteria,1VBS0@1239|Firmicutes,4HKXQ@91061|Bacilli,1ZI4R@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2487)	ypiF	-	-	-	-	-	-	-	-	-	-	-	DUF2487
PHALIAPI_02147	224308.BSU22580	1.29e-129	367.0	COG5582@1|root,COG5582@2|Bacteria,1V5KV@1239|Firmicutes,4HEE0@91061|Bacilli,1ZB4J@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0302 family	ypiB	-	-	-	-	-	-	-	-	-	-	-	IDEAL,UPF0302
PHALIAPI_02148	224308.BSU22590	1.39e-294	805.0	COG0457@1|root,COG0457@2|Bacteria,1TT97@1239|Firmicutes,4HAIA@91061|Bacilli,1ZAZM@1386|Bacillus	91061|Bacilli	S	COG0457 FOG TPR repeat	ypiA	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_7,TPR_8
PHALIAPI_02149	224308.BSU22600	3.7e-297	812.0	COG0128@1|root,COG0128@2|Bacteria,1TPIH@1239|Firmicutes,4HBHZ@91061|Bacilli,1ZBP0@1386|Bacillus	91061|Bacilli	E	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate	aroA	GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576	2.5.1.19	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03460	RC00350	ko00000,ko00001,ko00002,ko01000	-	-	-	EPSP_synthase
PHALIAPI_02150	224308.BSU22610	1.21e-264	725.0	COG0287@1|root,COG0287@2|Bacteria,1TPXG@1239|Firmicutes,4HBI4@91061|Bacilli,1ZBVZ@1386|Bacillus	91061|Bacilli	E	prephenate dehydrogenase	tyrA	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.3.1.12	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	M00025	R01728	RC00125	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU22610	ACT,PDH
PHALIAPI_02151	224308.BSU22620	1.83e-258	708.0	COG0079@1|root,COG0079@2|Bacteria,1TPUV@1239|Firmicutes,4HA1H@91061|Bacilli,1ZBYJ@1386|Bacillus	91061|Bacilli	E	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily	hisC	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
PHALIAPI_02152	224308.BSU22630	1.28e-184	514.0	COG0159@1|root,COG0159@2|Bacteria,1TPXA@1239|Firmicutes,4HFQ8@91061|Bacilli,1ZC5U@1386|Bacillus	91061|Bacilli	E	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate	trpA	-	4.2.1.20	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722	RC00209,RC00210,RC00700,RC00701,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_syntA
PHALIAPI_02153	224308.BSU22640	8.95e-293	798.0	COG0133@1|root,COG0133@2|Bacteria,1TPI3@1239|Firmicutes,4H9WC@91061|Bacilli,1ZCBT@1386|Bacillus	91061|Bacilli	E	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine	trpB	GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.2.1.20,5.3.1.24	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722,R03509	RC00209,RC00210,RC00700,RC00701,RC00945,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU22640	PALP
PHALIAPI_02154	224308.BSU22650	1.57e-150	423.0	COG0135@1|root,COG0135@2|Bacteria,1V6Y0@1239|Firmicutes,4HJ7Y@91061|Bacilli,1ZGH8@1386|Bacillus	91061|Bacilli	E	Belongs to the TrpF family	trpF	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
PHALIAPI_02155	1051501.AYTL01000030_gene2432	7.24e-146	414.0	COG0134@1|root,COG0134@2|Bacteria,1TR94@1239|Firmicutes,4HDZQ@91061|Bacilli,1ZD63@1386|Bacillus	91061|Bacilli	E	Belongs to the TrpC family	trpC	GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831	4.1.1.48,5.3.1.24	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03508,R03509	RC00944,RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	IGPS
PHALIAPI_02156	224308.BSU22670	2.03e-228	630.0	COG0547@1|root,COG0547@2|Bacteria,1TP8U@1239|Firmicutes,4H9KQ@91061|Bacilli,1ZBZ1@1386|Bacillus	91061|Bacilli	E	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)	trpD	GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0004425,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.18,4.1.3.27	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R00985,R00986,R01073	RC00010,RC00440,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Glycos_trans_3N,Glycos_transf_3
PHALIAPI_02157	224308.BSU22680	0.0	1007.0	COG0147@1|root,COG0147@2|Bacteria,1TQAP@1239|Firmicutes,4HB31@91061|Bacilli,1ZARE@1386|Bacillus	91061|Bacilli	EH	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia	trpE	GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	4.1.3.27	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Anth_synt_I_N,Chorismate_bind
PHALIAPI_02158	224308.BSU22690	1.98e-83	246.0	COG4401@1|root,COG4401@2|Bacteria,1VAID@1239|Firmicutes,4HKTN@91061|Bacilli,1ZH0S@1386|Bacillus	91061|Bacilli	E	Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis	aroH	GO:0003674,GO:0003824,GO:0004106,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0046417,GO:0071704	5.4.99.5	ko:K06208	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024,M00025	R01715	RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_1
PHALIAPI_02159	224308.BSU22700	1.57e-260	714.0	COG0337@1|root,COG0337@2|Bacteria,1TPKZ@1239|Firmicutes,4HAKN@91061|Bacilli,1ZC9C@1386|Bacillus	91061|Bacilli	E	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)	aroB	-	4.2.3.4	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03083	RC00847	ko00000,ko00001,ko00002,ko01000	-	-	-	DHQ_synthase
PHALIAPI_02160	224308.BSU22710	5.88e-277	758.0	COG0082@1|root,COG0082@2|Bacteria,1TQ40@1239|Firmicutes,4HA0H@91061|Bacilli,1ZB2N@1386|Bacillus	91061|Bacilli	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
PHALIAPI_02161	224308.BSU22720	3.03e-182	507.0	COG1352@1|root,COG1352@2|Bacteria,1TPD8@1239|Firmicutes,4HAS1@91061|Bacilli,1ZCKU@1386|Bacillus	91061|Bacilli	NT	COG1352 Methylase of chemotaxis methyl-accepting proteins	cheR	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
PHALIAPI_02162	224308.BSU22730	2.17e-104	301.0	COG0105@1|root,COG0105@2|Bacteria,1V44G@1239|Firmicutes,4HH8C@91061|Bacilli,1ZFJ7@1386|Bacillus	91061|Bacilli	F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ndk	GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564	2.7.4.6	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	M00049,M00050,M00052,M00053	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895	RC00002	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	NDK
PHALIAPI_02163	224308.BSU22740	4.09e-249	684.0	COG0142@1|root,COG0142@2|Bacteria,1TR0U@1239|Firmicutes,4H9RH@91061|Bacilli,1ZAZ7@1386|Bacillus	91061|Bacilli	H	Belongs to the FPP GGPP synthase family	hepT	GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663	2.5.1.30,2.5.1.83	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	-	R09245,R09247	RC00279	ko00000,ko00001,ko01000,ko01006	-	-	-	polyprenyl_synt
PHALIAPI_02164	224308.BSU22750	1.34e-169	473.0	COG0500@1|root,COG2226@2|Bacteria,1TQEA@1239|Firmicutes,4HAR9@91061|Bacilli,1ZB6U@1386|Bacillus	91061|Bacilli	H	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)	menG	GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Ubie_methyltran
PHALIAPI_02165	224308.BSU22760	1.02e-176	493.0	COG0142@1|root,COG0142@2|Bacteria,1V1TG@1239|Firmicutes,4HFY5@91061|Bacilli,1ZQJT@1386|Bacillus	91061|Bacilli	H	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1	hepS	GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663	2.5.1.30	ko:K00805	ko00900,ko01110,map00900,map01110	-	R09247	RC00279	ko00000,ko00001,ko01000,ko01006	-	-	-	HEPPP_synt_1
PHALIAPI_02166	224308.BSU22770	4.23e-45	145.0	2E4ES@1|root,32Z9Y@2|Bacteria,1VF84@1239|Firmicutes,4HNYS@91061|Bacilli,1ZHX6@1386|Bacillus	91061|Bacilli	K	Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan	mtrB	-	-	ko:K06285	-	-	-	-	ko00000,ko03000	-	-	-	TrpBP
PHALIAPI_02167	224308.BSU22780	4.41e-131	372.0	COG0302@1|root,COG0302@2|Bacteria,1TRNM@1239|Firmicutes,4HAXS@91061|Bacilli,1ZAZD@1386|Bacillus	91061|Bacilli	H	GTP cyclohydrolase	folE	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	3.5.4.16	ko:K01495	ko00790,ko01100,map00790,map01100	M00126,M00841,M00842,M00843	R00428,R04639,R05046,R05048	RC00263,RC00294,RC00323,RC00945,RC01188	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_cyclohydroI
PHALIAPI_02168	1051501.AYTL01000030_gene2445	1.07e-57	179.0	COG0776@1|root,COG0776@2|Bacteria,1V9XQ@1239|Firmicutes,4HKF2@91061|Bacilli,1ZH48@1386|Bacillus	91061|Bacilli	L	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions	hbs	GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141	-	ko:K03530	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
PHALIAPI_02169	224308.BSU22800	0.0	964.0	COG0699@1|root,COG0699@2|Bacteria,1TPPG@1239|Firmicutes,4HBH1@91061|Bacilli,1ZBNH@1386|Bacillus	91061|Bacilli	S	ATPase. Has a role at an early stage in the morphogenesis of the spore coat	spoIVA	GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009653,GO:0009847,GO:0009987,GO:0010927,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022607,GO:0030154,GO:0030203,GO:0030312,GO:0030435,GO:0030554,GO:0031160,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032989,GO:0034622,GO:0035639,GO:0036094,GO:0042244,GO:0042546,GO:0042601,GO:0042763,GO:0043167,GO:0043168,GO:0043170,GO:0043591,GO:0043595,GO:0043933,GO:0043934,GO:0044085,GO:0044426,GO:0044462,GO:0044464,GO:0045229,GO:0048646,GO:0048856,GO:0048869,GO:0051258,GO:0051259,GO:0065003,GO:0070499,GO:0070590,GO:0070726,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564	-	ko:K06398	-	-	-	-	ko00000	-	-	-	Spore_IV_A
PHALIAPI_02170	224308.BSU22810	7.16e-175	487.0	28J08@1|root,2Z8XG@2|Bacteria,1V177@1239|Firmicutes,4HCWC@91061|Bacilli,1ZCRV@1386|Bacillus	91061|Bacilli	-	-	yphF	-	-	-	-	-	-	-	-	-	-	-	DUF3939
PHALIAPI_02171	1274524.BSONL12_01907	7.09e-27	99.4	2EJSH@1|root,33DH6@2|Bacteria,1VMUI@1239|Firmicutes,4HS5M@91061|Bacilli,1ZJ2B@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2768)	yphE	-	-	-	-	-	-	-	-	-	-	-	DUF2768
PHALIAPI_02172	224308.BSU22830	6.32e-231	637.0	COG0240@1|root,COG0240@2|Bacteria,1TQ5P@1239|Firmicutes,4HAXW@91061|Bacilli,1ZCHQ@1386|Bacillus	91061|Bacilli	I	Glycerol-3-phosphate dehydrogenase	gpsA	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0047952,GO:0055114	1.1.1.94	ko:K00057	ko00564,ko01110,map00564,map01110	-	R00842,R00844	RC00029	ko00000,ko00001,ko01000	-	-	-	NAD_Gly3P_dh_C,NAD_Gly3P_dh_N
PHALIAPI_02173	224308.BSU22840	5.72e-316	860.0	COG1160@1|root,COG1160@2|Bacteria,1TPNM@1239|Firmicutes,4HAJ6@91061|Bacilli,1ZAUP@1386|Bacillus	91061|Bacilli	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
PHALIAPI_02174	224308.BSU22849	8.69e-40	131.0	2E5GX@1|root,3308G@2|Bacteria,1VGKE@1239|Firmicutes,4HPSE@91061|Bacilli,1ZIU7@1386|Bacillus	91061|Bacilli	-	-	ypzH	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02175	224308.BSU22850	4.35e-207	573.0	28IBV@1|root,2Z8EA@2|Bacteria,1TPCJ@1239|Firmicutes,4HB3C@91061|Bacilli,1ZBT4@1386|Bacillus	91061|Bacilli	S	YIEGIA protein	yphB	-	-	ko:K05739	-	-	-	-	ko00000	-	-	-	YIEGIA
PHALIAPI_02176	224308.BSU22860	7.5e-132	375.0	2C369@1|root,32TN5@2|Bacteria,1VDHE@1239|Firmicutes,4HN2A@91061|Bacilli	91061|Bacilli	-	-	yphA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02177	1196324.A374_03349	1.13e-11	59.3	2EHPS@1|root,33BFI@2|Bacteria,1VM1E@1239|Firmicutes,4HS3S@91061|Bacilli	91061|Bacilli	S	YpzI-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YpzI
PHALIAPI_02178	224308.BSU22870	1.98e-236	652.0	COG1304@1|root,COG1304@2|Bacteria,1TQZ3@1239|Firmicutes,4HAMV@91061|Bacilli,1ZCXC@1386|Bacillus	91061|Bacilli	C	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)	fni	GO:0003674,GO:0003824,GO:0004452,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0071704,GO:1901576	5.3.3.2	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095,M00096,M00364,M00365,M00366,M00367	R01123	RC00455	ko00000,ko00001,ko00002,ko01000	-	-	-	FMN_dh
PHALIAPI_02179	224308.BSU22880	1.57e-261	718.0	COG0539@1|root,COG0539@2|Bacteria,1TQ9N@1239|Firmicutes,4H9PX@91061|Bacilli,1ZARR@1386|Bacillus	91061|Bacilli	J	Ribosomal protein S1	rpsA	-	-	ko:K02945	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	S1
PHALIAPI_02180	224308.BSU22890	1.94e-144	409.0	COG0283@1|root,COG0283@2|Bacteria,1V3IA@1239|Firmicutes,4HFZE@91061|Bacilli,1ZBXZ@1386|Bacillus	91061|Bacilli	F	Belongs to the cytidylate kinase family. Type 1 subfamily	cmk	GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	2.7.4.25	ko:K00945	ko00240,ko01100,map00240,map01100	M00052	R00158,R00512,R01665	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Cytidylate_kin
PHALIAPI_02181	224308.BSU22900	1.74e-32	112.0	29NTG@1|root,309RK@2|Bacteria,1U5JI@1239|Firmicutes,4IFAC@91061|Bacilli,1ZK0C@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5359)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5359
PHALIAPI_02182	224308.BSU22910	2.46e-139	395.0	COG5581@1|root,COG5581@2|Bacteria,1V31U@1239|Firmicutes,4HGFE@91061|Bacilli,1ZCCG@1386|Bacillus	91061|Bacilli	M	Flagellar protein YcgR	ypfA	-	-	-	-	-	-	-	-	-	-	-	PilZ,YcgR_2
PHALIAPI_02183	224308.BSU22920	0.0	882.0	COG2959@1|root,COG2959@2|Bacteria,1TT9K@1239|Firmicutes,4HBM9@91061|Bacilli,1ZB4M@1386|Bacillus	91061|Bacilli	H	sporulation protein	ypeB	-	-	ko:K06313	-	-	-	-	ko00000	-	-	-	PepSY,YPEB
PHALIAPI_02184	224308.BSU22930	1.4e-207	575.0	COG3409@1|root,COG3773@1|root,COG3409@2|Bacteria,COG3773@2|Bacteria,1TRFW@1239|Firmicutes,4HA2V@91061|Bacilli,1ZB40@1386|Bacillus	91061|Bacilli	M	Spore cortex-lytic enzyme	sleB	GO:0005575,GO:0005623,GO:0042763,GO:0044464	3.5.1.28	ko:K01449	-	-	R04112	RC00064,RC00141	ko00000,ko01000	-	-	-	Hydrolase_2,PG_binding_1
PHALIAPI_02185	224308.BSU22940	1.76e-153	431.0	COG2339@1|root,COG2339@2|Bacteria,1UZGQ@1239|Firmicutes,4HCGD@91061|Bacilli,1ZBUQ@1386|Bacillus	91061|Bacilli	S	Involved in the degradation of specific anti-sigma factors	prsW	-	-	-	-	-	-	-	-	-	-	-	PrsW-protease
PHALIAPI_02186	1051501.AYTL01000030_gene2463	2.62e-224	619.0	COG0492@1|root,COG0492@2|Bacteria,1TQGS@1239|Firmicutes,4HBIS@91061|Bacilli,1ZCBR@1386|Bacillus	91061|Bacilli	O	COG0492 Thioredoxin reductase	ypdA	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_3
PHALIAPI_02187	1051501.AYTL01000030_gene2464	1.42e-308	840.0	COG0334@1|root,COG0334@2|Bacteria,1TP45@1239|Firmicutes,4HAEI@91061|Bacilli,1ZAX4@1386|Bacillus	91061|Bacilli	E	Belongs to the Glu Leu Phe Val dehydrogenases family	gudB	GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0055114,GO:0071704,GO:1901564	1.4.1.2	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	-	R00243	RC00006,RC02799	ko00000,ko00001,ko01000	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
PHALIAPI_02188	224308.BSU22970	5.56e-136	385.0	COG4862@1|root,COG4862@2|Bacteria,1V1B7@1239|Firmicutes,4HBM5@91061|Bacilli,1ZF7G@1386|Bacillus	91061|Bacilli	NOT	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC	mecB	GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496	-	ko:K16511	-	-	-	-	ko00000	-	-	-	MecA
PHALIAPI_02189	224308.BSU22980	8.38e-186	516.0	COG1408@1|root,COG1408@2|Bacteria,1V494@1239|Firmicutes,4HH1B@91061|Bacilli,1ZBFW@1386|Bacillus	91061|Bacilli	S	Calcineurin-like phosphoesterase superfamily domain	ypbG	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos,Metallophos_2
PHALIAPI_02190	224308.BSU22990	1.66e-105	304.0	2EENU@1|root,338GN@2|Bacteria,1VK1A@1239|Firmicutes,4HNX3@91061|Bacilli,1ZC57@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2663)	ypbF	-	-	-	-	-	-	-	-	-	-	-	DUF2663
PHALIAPI_02191	224308.BSU23000	6.42e-136	389.0	COG1388@1|root,COG1388@2|Bacteria,1V8A5@1239|Firmicutes,4HIV2@91061|Bacilli,1ZG8Q@1386|Bacillus	91061|Bacilli	M	Lysin motif	ypbE	-	-	-	-	-	-	-	-	-	-	-	LysM
PHALIAPI_02192	224308.BSU23010	1.02e-127	364.0	COG1266@1|root,COG1266@2|Bacteria,1V4WK@1239|Firmicutes,4HHKM@91061|Bacilli,1ZEBP@1386|Bacillus	91061|Bacilli	S	metal-dependent membrane protease	ypbD	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
PHALIAPI_02193	224308.BSU23020	0.0	981.0	COG0514@1|root,COG0514@2|Bacteria,1TPN5@1239|Firmicutes,4H9QP@91061|Bacilli,1ZB1X@1386|Bacillus	91061|Bacilli	L	DNA helicase	recQ	GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecQ_Zn_bind
PHALIAPI_02194	224308.BSU23030	1.82e-254	697.0	COG4955@1|root,COG4955@2|Bacteria,1TQU9@1239|Firmicutes,4HFUR@91061|Bacilli,1ZDGR@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ypbB	-	5.1.3.1	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01529	RC00540	ko00000,ko00001,ko00002,ko01000	-	-	-	HTH_40,RQC
PHALIAPI_02195	1051501.AYTL01000030_gene2472	8.35e-55	171.0	COG1141@1|root,COG1141@2|Bacteria,1VAC2@1239|Firmicutes,4HKG7@91061|Bacilli,1ZHTS@1386|Bacillus	91061|Bacilli	C	Ferredoxin	fer	GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114	-	ko:K05337	-	-	-	-	ko00000	-	-	-	Fer4_13
PHALIAPI_02196	224308.BSU23050	6.2e-122	349.0	COG3601@1|root,COG3601@2|Bacteria,1V4BW@1239|Firmicutes,4HHFT@91061|Bacilli,1ZG7K@1386|Bacillus	91061|Bacilli	U	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins	ribU	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656	-	-	-	-	-	-	-	-	-	-	ECF_trnsprt
PHALIAPI_02197	224308.BSU23070	0.0	1016.0	COG0111@1|root,COG0111@2|Bacteria,1V410@1239|Firmicutes,4H9PH@91061|Bacilli,1ZDB3@1386|Bacillus	91061|Bacilli	E	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	iYO844.BSU23070	2-Hacid_dh,2-Hacid_dh_C,ACT
PHALIAPI_02198	224308.BSU23080	6.53e-172	481.0	COG0710@1|root,COG0710@2|Bacteria,1TSPN@1239|Firmicutes,4HDMG@91061|Bacilli,1ZD9W@1386|Bacillus	91061|Bacilli	E	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate	aroD	GO:0003674,GO:0003824,GO:0003855,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009058,GO:0009712,GO:0009713,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018958,GO:0019438,GO:0019752,GO:0032787,GO:0042537,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046189,GO:0046278,GO:0046279,GO:0046394,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617	4.2.1.10	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03084	RC00848	ko00000,ko00001,ko00002,ko01000	-	-	-	DHquinase_I
PHALIAPI_02199	224308.BSU23090	6.23e-247	680.0	2E6XT@1|root,331H4@2|Bacteria,1VJ9Y@1239|Firmicutes,4HPEM@91061|Bacilli,1ZBUX@1386|Bacillus	91061|Bacilli	-	-	rsiX	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	Germane
PHALIAPI_02200	224308.BSU23100	1.08e-133	379.0	COG1595@1|root,COG1595@2|Bacteria,1V4T2@1239|Firmicutes,4HFZ0@91061|Bacilli,1ZEC7@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	sigX	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
PHALIAPI_02201	224308.BSU23110	0.0	1135.0	COG5002@1|root,COG5002@2|Bacteria,1TQ1H@1239|Firmicutes,4HBZ0@91061|Bacilli,1ZAQC@1386|Bacillus	91061|Bacilli	T	Histidine kinase	resE	-	2.7.13.3	ko:K07651	ko02020,map02020	M00458	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA,PAS,PAS_4
PHALIAPI_02202	224308.BSU23120	1.69e-171	478.0	COG0745@1|root,COG0745@2|Bacteria,1TPZ0@1239|Firmicutes,4HA7D@91061|Bacilli,1ZC0F@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	resD	-	-	ko:K07775	ko02020,map02020	M00458	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_02203	224308.BSU23130	2.7e-278	761.0	COG0755@1|root,COG0755@2|Bacteria,1TQZ4@1239|Firmicutes,4HA2N@91061|Bacilli,1ZBH9@1386|Bacillus	91061|Bacilli	O	'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'	resC	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008152,GO:0015886,GO:0016020,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0055114,GO:0071702,GO:0071705,GO:0071944,GO:1901678	-	-	-	-	-	-	-	-	-	-	Cytochrom_C_asm
PHALIAPI_02204	224308.BSU23140	0.0	1088.0	COG1333@1|root,COG1333@2|Bacteria,1TQ6C@1239|Firmicutes,4HAFD@91061|Bacilli,1ZBB3@1386|Bacillus	91061|Bacilli	O	COG1333 ResB protein required for cytochrome c biosynthesis	resB	-	-	ko:K07399	-	-	-	-	ko00000	-	-	-	ResB
PHALIAPI_02205	224308.BSU23150	1.5e-128	365.0	COG0526@1|root,COG0526@2|Bacteria,1VAPY@1239|Firmicutes,4HIQ3@91061|Bacilli,1ZCW1@1386|Bacillus	91061|Bacilli	CO	Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c	resA	GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
PHALIAPI_02206	224308.BSU23160	4.45e-169	473.0	COG1187@1|root,COG1187@2|Bacteria,1TP68@1239|Firmicutes,4H9MU@91061|Bacilli,1ZBNQ@1386|Bacillus	91061|Bacilli	J	Belongs to the pseudouridine synthase RsuA family	rluB	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.22	ko:K06178	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
PHALIAPI_02207	224308.BSU23170	4.99e-113	325.0	COG0700@1|root,COG0700@2|Bacteria,1V45M@1239|Firmicutes,4HH1Y@91061|Bacilli,1ZFIY@1386|Bacillus	91061|Bacilli	S	Spore maturation protein	spmB	-	-	ko:K06374	-	-	-	-	ko00000	-	-	-	Gate
PHALIAPI_02208	224308.BSU23180	7.57e-135	382.0	COG2715@1|root,COG2715@2|Bacteria,1V1E2@1239|Firmicutes,4HBTK@91061|Bacilli,1ZBSV@1386|Bacillus	91061|Bacilli	S	Spore maturation protein	spmA	-	-	ko:K06373	-	-	-	-	ko00000	-	-	-	Gate
PHALIAPI_02209	224308.BSU23190	2.37e-272	745.0	COG1686@1|root,COG1686@2|Bacteria,1TQ8M@1239|Firmicutes,4HAHH@91061|Bacilli,1ZBRQ@1386|Bacillus	91061|Bacilli	M	Belongs to the peptidase S11 family	dacB	GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.16.4	ko:K07258	ko00550,ko01100,map00550,map01100	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	PBP5_C,Peptidase_S11
PHALIAPI_02210	224308.BSU23200	2.92e-126	359.0	29P42@1|root,30A29@2|Bacteria,1V423@1239|Firmicutes,4HH8N@91061|Bacilli,1ZG69@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3907)	ypuI	-	-	-	-	-	-	-	-	-	-	-	DUF3907
PHALIAPI_02211	224308.BSU23210	2e-135	384.0	COG1386@1|root,COG1386@2|Bacteria,1V6HI@1239|Firmicutes,4HIQ0@91061|Bacilli,1ZFNU@1386|Bacillus	91061|Bacilli	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves	scpB	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K06024	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpB
PHALIAPI_02212	224308.BSU23220	2.6e-161	453.0	COG1354@1|root,COG1354@2|Bacteria,1TRW3@1239|Firmicutes,4HA6Q@91061|Bacilli,1ZDD6@1386|Bacillus	91061|Bacilli	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves	scpA	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K05896	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpA
PHALIAPI_02213	224308.BSU23230	2.41e-118	338.0	COG1547@1|root,COG1547@2|Bacteria,1V7AS@1239|Firmicutes,4HI8I@91061|Bacilli,1ZR7S@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF309)	ypuF	-	-	ko:K09763	-	-	-	-	ko00000	-	-	-	DUF309
PHALIAPI_02214	1051501.AYTL01000030_gene2492	1.12e-83	247.0	COG0454@1|root,COG0456@2|Bacteria,1VAD7@1239|Firmicutes,4HKR2@91061|Bacilli,1ZHDK@1386|Bacillus	91061|Bacilli	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	ribT	-	-	ko:K02859	-	-	-	-	ko00000	-	-	-	Acetyltransf_1,Acetyltransf_10
PHALIAPI_02215	1051501.AYTL01000030_gene2493	8.41e-107	308.0	COG0054@1|root,COG0054@2|Bacteria,1V1DA@1239|Firmicutes,4HFRA@91061|Bacilli,1ZFJ6@1386|Bacillus	91061|Bacilli	H	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin	ribH	GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.78	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R04457	RC00960	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS08940	DMRL_synthase
PHALIAPI_02216	224308.BSU23260	2.1e-290	792.0	COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,1TPH9@1239|Firmicutes,4H9PW@91061|Bacilli,1ZBF9@1386|Bacillus	91061|Bacilli	H	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate	ribBA	GO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0019238,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	3.5.4.25,4.1.99.12	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	M00125,M00840	R00425,R07281	RC00293,RC01792,RC01815,RC02504	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS08945	DHBP_synthase,GTP_cyclohydro2
PHALIAPI_02217	224308.BSU23270	7.16e-147	414.0	COG0307@1|root,COG0307@2|Bacteria,1V1EP@1239|Firmicutes,4HC7B@91061|Bacilli,1ZBB9@1386|Bacillus	91061|Bacilli	H	Riboflavin synthase	ribE	GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.9	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00066	RC00958,RC00960	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS08950,iYO844.BSU23270	Lum_binding
PHALIAPI_02218	224308.BSU23280	1.02e-260	714.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,1TP4F@1239|Firmicutes,4HBNA@91061|Bacilli,1ZBTJ@1386|Bacillus	91061|Bacilli	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C,dCMP_cyt_deam_1
PHALIAPI_02219	224308.BSU23300	5.98e-72	216.0	29RI8@1|root,30D34@2|Bacteria,1UAS0@1239|Firmicutes,4IM4U@91061|Bacilli,1ZJ5R@1386|Bacillus	91061|Bacilli	-	-	ypuD	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02220	224308.BSU23310	3.39e-132	374.0	COG0681@1|root,COG0681@2|Bacteria,1V2BJ@1239|Firmicutes,4HGCB@91061|Bacilli,1ZGNJ@1386|Bacillus	91061|Bacilli	U	Belongs to the peptidase S26 family	lepB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
PHALIAPI_02221	224308.BSU23328	2.49e-43	140.0	COG3478@1|root,COG3478@2|Bacteria,1VEIV@1239|Firmicutes,4HNP6@91061|Bacilli,1ZJ32@1386|Bacillus	91061|Bacilli	S	nucleic-acid-binding protein containing a Zn-ribbon domain	ypzJ	-	-	ko:K07069	-	-	-	-	ko00000	-	-	-	zinc_ribbon_13
PHALIAPI_02223	224308.BSU23360	1.23e-105	304.0	COG0652@1|root,COG0652@2|Bacteria,1TRHW@1239|Firmicutes,4HHA1@91061|Bacilli,1ZFRG@1386|Bacillus	91061|Bacilli	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	ppiB	GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564	5.2.1.8	ko:K03768	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Pro_isomerase
PHALIAPI_02224	224308.BSU23370	3.64e-191	532.0	COG4086@1|root,COG4086@2|Bacteria,1TR2I@1239|Firmicutes,4HBVZ@91061|Bacilli,1ZD5H@1386|Bacillus	91061|Bacilli	S	Secreted protein	ypuA	-	-	-	-	-	-	-	-	-	-	-	DUF1002
PHALIAPI_02225	224308.BSU23380	0.0	880.0	COG0019@1|root,COG0019@2|Bacteria,1TPE9@1239|Firmicutes,4H9XW@91061|Bacilli,1ZD43@1386|Bacillus	91061|Bacilli	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	lysA	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
PHALIAPI_02226	224308.BSU23390	0.0	944.0	COG0697@1|root,COG0697@2|Bacteria,1TP7K@1239|Firmicutes,4HBWN@91061|Bacilli,1ZB54@1386|Bacillus	91061|Bacilli	EG	Stage V sporulation protein AF	spoVAF	-	-	ko:K06408	-	-	-	-	ko00000	-	-	-	GerA
PHALIAPI_02227	224308.BSU23401	1.85e-143	404.0	29419@1|root,2ZRG2@2|Bacteria,1V3UB@1239|Firmicutes,4HGP9@91061|Bacilli,1ZR7J@1386|Bacillus	91061|Bacilli	S	stage V sporulation protein	-	-	-	ko:K06407	-	-	-	-	ko00000	-	-	-	SpoVAE
PHALIAPI_02228	224308.BSU23402	2.15e-75	225.0	2ANER@1|root,315MJ@2|Bacteria,1V6SU@1239|Firmicutes,4HIW4@91061|Bacilli,1ZG67@1386|Bacillus	91061|Bacilli	S	stage V sporulation protein	spoVAEB	-	-	ko:K06407	-	-	-	-	ko00000	-	-	-	SpoVAC_SpoVAEB
PHALIAPI_02229	224308.BSU23410	6.02e-246	675.0	COG0332@1|root,COG0332@2|Bacteria,1TPDE@1239|Firmicutes,4H9W9@91061|Bacilli,1ZAW8@1386|Bacillus	91061|Bacilli	I	Stage V sporulation protein AD	spoVAD	GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0031160,GO:0044464,GO:0071944	-	ko:K06406	-	-	-	-	ko00000	-	-	-	SpoVAD
PHALIAPI_02230	224308.BSU23420	6.71e-102	295.0	2ANER@1|root,31DDD@2|Bacteria,1V46U@1239|Firmicutes,4HH0C@91061|Bacilli,1ZFW2@1386|Bacillus	91061|Bacilli	S	stage V sporulation protein AC	spoVAC	-	-	ko:K06405	-	-	-	-	ko00000	-	-	-	SpoVAC_SpoVAEB
PHALIAPI_02231	224308.BSU23430	5.43e-90	264.0	2AF43@1|root,3152T@2|Bacteria,1VFMI@1239|Firmicutes,4HIN3@91061|Bacilli,1ZGZY@1386|Bacillus	91061|Bacilli	S	Stage V sporulation protein AB	spoVAB	-	-	ko:K06404	-	-	-	-	ko00000	-	-	-	SpoVAB
PHALIAPI_02232	224308.BSU23440	6.68e-143	403.0	28PNE@1|root,2ZCB6@2|Bacteria,1V214@1239|Firmicutes,4HFTI@91061|Bacilli,1ZBVY@1386|Bacillus	91061|Bacilli	S	Stage V sporulation protein AA	spoVAA	-	-	ko:K06403	-	-	-	-	ko00000	-	-	-	SporV_AA
PHALIAPI_02233	224308.BSU23450	1.18e-174	488.0	COG1191@1|root,COG1191@2|Bacteria,1TP3Q@1239|Firmicutes,4HC42@91061|Bacilli,1ZANZ@1386|Bacillus	91061|Bacilli	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	sigF	-	-	ko:K03091	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r3,Sigma70_r4
PHALIAPI_02234	224308.BSU23460	1.37e-99	289.0	COG2172@1|root,COG2172@2|Bacteria,1V6V2@1239|Firmicutes,4HGYN@91061|Bacilli,1ZFKS@1386|Bacillus	91061|Bacilli	F	Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition	spoIIAB	GO:0000003,GO:0000988,GO:0000989,GO:0003674,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	2.7.11.1	ko:K06379	-	-	-	-	ko00000,ko01000	-	-	-	HATPase_c_2
PHALIAPI_02235	1051501.AYTL01000030_gene2512	3e-76	228.0	COG1366@1|root,COG1366@2|Bacteria,1VENG@1239|Firmicutes,4HINR@91061|Bacilli,1ZGYC@1386|Bacillus	91061|Bacilli	T	Belongs to the anti-sigma-factor antagonist family	spoIIAA	-	-	ko:K06378	-	-	-	-	ko00000	-	-	-	STAS
PHALIAPI_02236	224308.BSU23480	3.37e-271	743.0	COG1686@1|root,COG1686@2|Bacteria,1TQN0@1239|Firmicutes,4HBCE@91061|Bacilli,1ZB0W@1386|Bacillus	91061|Bacilli	M	Belongs to the peptidase S11 family	dacF	GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.16.4	ko:K07258	ko00550,ko01100,map00550,map01100	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	PBP5_C,Peptidase_S11
PHALIAPI_02237	224308.BSU23490	1.39e-190	529.0	COG0005@1|root,COG0005@2|Bacteria,1TQ37@1239|Firmicutes,4HABP@91061|Bacilli,1ZBKZ@1386|Bacillus	91061|Bacilli	F	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate	punA	-	2.4.2.1,2.4.2.28	ko:K00772,ko:K03783	ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110	M00034	R01402,R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244	RC00033,RC00063,RC00122,RC02819	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_UDP_1
PHALIAPI_02238	224308.BSU23500	6.8e-294	801.0	COG1015@1|root,COG1015@2|Bacteria,1TP70@1239|Firmicutes,4H9RU@91061|Bacilli,1ZBG0@1386|Bacillus	91061|Bacilli	G	Phosphotransfer between the C1 and C5 carbon atoms of pentose	deoB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008973,GO:0009987,GO:0016853,GO:0016866,GO:0016868,GO:0034641,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360	5.4.2.7	ko:K01839	ko00030,ko00230,map00030,map00230	-	R01057,R02749	RC00408	ko00000,ko00001,ko01000	-	-	-	Metalloenzyme
PHALIAPI_02239	224308.BSU23510	3.91e-214	591.0	COG4974@1|root,COG4974@2|Bacteria,1TQRG@1239|Firmicutes,4HAEX@91061|Bacilli,1ZDBF@1386|Bacillus	91061|Bacilli	L	recombinase XerD	xerD	-	-	ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
PHALIAPI_02240	224308.BSU23519	2.73e-50	159.0	2E9B4@1|root,333IZ@2|Bacteria,1VHUQ@1239|Firmicutes,4HR2C@91061|Bacilli,1ZIY4@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF4227)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4227
PHALIAPI_02241	224308.BSU23520	2.26e-104	301.0	COG0735@1|root,COG0735@2|Bacteria,1V7F0@1239|Firmicutes,4HH78@91061|Bacilli,1ZCPG@1386|Bacillus	91061|Bacilli	P	Belongs to the Fur family	fur	GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
PHALIAPI_02242	224308.BSU23530	1.96e-139	395.0	COG1300@1|root,COG1300@2|Bacteria,1V81P@1239|Firmicutes,4HJW8@91061|Bacilli,1ZAYC@1386|Bacillus	91061|Bacilli	S	Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane	spoIIM	GO:0005575,GO:0005623,GO:0008150,GO:0010564,GO:0022603,GO:0030428,GO:0032465,GO:0032467,GO:0032954,GO:0042173,GO:0043937,GO:0044087,GO:0044089,GO:0044464,GO:0045595,GO:0045787,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051130,GO:0051302,GO:0051726,GO:0051781,GO:0065007,GO:0090068,GO:1901891,GO:1901893	-	ko:K06384	-	-	-	-	ko00000	-	-	-	SpoIIM
PHALIAPI_02243	224308.BSU23540	7.27e-42	137.0	2B8M5@1|root,321WG@2|Bacteria,1UAP9@1239|Firmicutes,4IM1W@91061|Bacilli,1ZIS1@1386|Bacillus	91061|Bacilli	-	-	yqkK	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02244	224308.BSU23550	1.32e-307	839.0	COG0281@1|root,COG0281@2|Bacteria,1UYHB@1239|Firmicutes,4HDRG@91061|Bacilli,1ZDC7@1386|Bacillus	91061|Bacilli	C	malic enzyme	mleA	-	1.1.1.38	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	-	R00214	RC00105	ko00000,ko00001,ko01000	-	-	-	2-Hacid_dh_C,ACT_4,Malic_M,THF_DHG_CYH_C,malic
PHALIAPI_02245	224308.BSU23560	0.0	867.0	COG1757@1|root,COG1757@2|Bacteria,1TQ3B@1239|Firmicutes,4HA18@91061|Bacilli,1ZBQN@1386|Bacillus	91061|Bacilli	C	Na H antiporter	mleN	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03315	-	-	-	-	ko00000,ko02000	2.A.35	-	-	Na_H_antiporter
PHALIAPI_02246	224308.BSU23570	0.0	928.0	COG1027@1|root,COG1027@2|Bacteria,1TP3U@1239|Firmicutes,4HFM9@91061|Bacilli,1ZB5F@1386|Bacillus	91061|Bacilli	E	Aspartate ammonia-lyase	aspA	-	4.3.1.1	ko:K01744	ko00250,ko01100,map00250,map01100	-	R00490	RC00316,RC02799	ko00000,ko00001,ko01000	-	-	-	FumaraseC_C,Lyase_1
PHALIAPI_02247	224308.BSU23580	5.09e-238	654.0	COG0252@1|root,COG0252@2|Bacteria,1TPP9@1239|Firmicutes,4HD98@91061|Bacilli,1ZQ9H@1386|Bacillus	91061|Bacilli	EJ	L-asparaginase	ansA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
PHALIAPI_02248	224308.BSU23590	3.18e-77	230.0	COG1396@1|root,COG1396@2|Bacteria,1VK84@1239|Firmicutes,4HM8Q@91061|Bacilli,1ZI74@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ansR	-	-	-	-	-	-	-	-	-	-	-	HTH_3
PHALIAPI_02249	224308.BSU23600	3.99e-278	760.0	COG1379@1|root,COG1379@2|Bacteria,1TP9P@1239|Firmicutes,4HCQ4@91061|Bacilli,1ZASI@1386|Bacillus	91061|Bacilli	L	DNA helicase	yqxK	-	-	-	-	-	-	-	-	-	-	-	PHP_C
PHALIAPI_02250	224308.BSU23610	4.76e-119	341.0	COG0494@1|root,COG0494@2|Bacteria,1V6F5@1239|Firmicutes,4HII9@91061|Bacilli,1ZFIW@1386|Bacillus	91061|Bacilli	L	Belongs to the Nudix hydrolase family	nudF	-	3.6.1.13	ko:K01515	ko00230,map00230	-	R01054	RC00002	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS07540,iYO844.BSU23610	NUDIX
PHALIAPI_02251	545693.BMQ_4402	8.21e-10	54.7	29S4Z@1|root,30D9H@2|Bacteria,1UB1A@1239|Firmicutes,4IME6@91061|Bacilli,1ZJXS@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3936)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3936
PHALIAPI_02252	224308.BSU23620	3.61e-215	594.0	COG0667@1|root,COG0667@2|Bacteria,1TTT8@1239|Firmicutes,4H9XM@91061|Bacilli,1ZBYV@1386|Bacillus	91061|Bacilli	C	oxidoreductases (related to aryl-alcohol dehydrogenases)	yqkF	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
PHALIAPI_02253	224308.BSU23630	6.61e-26	97.4	2EGUT@1|root,30CDC@2|Bacteria,1U9P4@1239|Firmicutes,4HZT2@91061|Bacilli	91061|Bacilli	S	Protein of unknown function (DUF3886)	yqkE	-	-	-	-	-	-	-	-	-	-	-	DUF3886
PHALIAPI_02254	224308.BSU23640	5.09e-219	605.0	COG1073@1|root,COG1073@2|Bacteria,1TQYU@1239|Firmicutes,4HC4H@91061|Bacilli,1ZBDV@1386|Bacillus	91061|Bacilli	S	COG1073 Hydrolases of the alpha beta superfamily	yqkD	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Hydrolase_4
PHALIAPI_02255	224308.BSU23650	1.12e-53	167.0	2FH9Z@1|root,34949@2|Bacteria,1VYS1@1239|Firmicutes,4HYMH@91061|Bacilli,1ZIBH@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2552)	yqkC	-	-	-	-	-	-	-	-	-	-	-	DUF2552
PHALIAPI_02256	224308.BSU23660	5.08e-72	216.0	COG4918@1|root,COG4918@2|Bacteria,1VJ11@1239|Firmicutes,4HPA2@91061|Bacilli,1ZSK4@1386|Bacillus	91061|Bacilli	S	Belongs to the HesB IscA family	yqkB	-	-	-	-	-	-	-	-	-	-	-	Fe-S_biosyn
PHALIAPI_02257	224308.BSU23670	2.66e-247	679.0	COG0454@1|root,COG2320@1|root,COG0456@2|Bacteria,COG2320@2|Bacteria,1V3IB@1239|Firmicutes,4HH5X@91061|Bacilli,1ZHJE@1386|Bacillus	91061|Bacilli	K	GrpB protein	yqkA	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10,GrpB
PHALIAPI_02258	224308.BSU23680	2.25e-78	233.0	COG2329@1|root,COG2329@2|Bacteria,1VAM1@1239|Firmicutes,4HJD7@91061|Bacilli,1ZHXP@1386|Bacillus	91061|Bacilli	S	enzyme involved in biosynthesis of extracellular polysaccharides	yqjZ	-	-	-	-	-	-	-	-	-	-	-	ABM
PHALIAPI_02259	224308.BSU23690	9.06e-112	320.0	COG0454@1|root,COG0456@2|Bacteria,1V50M@1239|Firmicutes,4HH63@91061|Bacilli,1ZG7D@1386|Bacillus	91061|Bacilli	K	acetyltransferase	yqjY	GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	-	ko:K06977	-	-	-	-	ko00000	-	-	-	Acetyltransf_1
PHALIAPI_02260	1051501.AYTL01000030_gene2536	3.23e-66	202.0	2DQHI@1|root,336W6@2|Bacteria,1VM8Z@1239|Firmicutes,4HQJC@91061|Bacilli	91061|Bacilli	S	YolD-like protein	yqiX	-	-	-	-	-	-	-	-	-	-	-	YolD
PHALIAPI_02261	224308.BSU23710	3.31e-303	826.0	COG0389@1|root,COG0389@2|Bacteria,1TP42@1239|Firmicutes,4HA1P@91061|Bacilli,1ZC8I@1386|Bacillus	91061|Bacilli	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	polYB	-	2.7.7.7	ko:K02346,ko:K03502	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C,IMS_HHH
PHALIAPI_02263	224308.BSU23730	9.28e-286	782.0	COG2211@1|root,COG2211@2|Bacteria,1UI4M@1239|Firmicutes,4ISD6@91061|Bacilli,1ZS7N@1386|Bacillus	91061|Bacilli	G	Major Facilitator Superfamily	yqjV	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_1_like,Sugar_tr
PHALIAPI_02265	224308.BSU23750	3.15e-94	274.0	COG0346@1|root,COG0346@2|Bacteria,1V6KX@1239|Firmicutes,4HJMS@91061|Bacilli,1ZGG2@1386|Bacillus	91061|Bacilli	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	yqjT	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase,Glyoxalase_4
PHALIAPI_02266	224308.BSU23760	6.6e-229	630.0	COG1072@1|root,COG1072@2|Bacteria,1TPHJ@1239|Firmicutes,4HA4K@91061|Bacilli,1ZB00@1386|Bacillus	91061|Bacilli	F	Pantothenic acid kinase	coaA	GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.33	ko:K00867	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PRK
PHALIAPI_02267	224308.BSU23770	0.0	897.0	COG3048@1|root,COG3048@2|Bacteria,1TPAH@1239|Firmicutes,4HANC@91061|Bacilli,1ZASU@1386|Bacillus	91061|Bacilli	E	Belongs to the serine threonine dehydratase family. DsdA subfamily	dsdA	GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008721,GO:0009987,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564	4.3.1.18	ko:K01753	ko00260,map00260	-	R00221	RC02600	ko00000,ko00001,ko01000	-	-	-	PALP
PHALIAPI_02268	224308.BSU23780	6.89e-185	514.0	COG0300@1|root,COG0300@2|Bacteria,1TSJ3@1239|Firmicutes,4HDU5@91061|Bacilli,1ZBRZ@1386|Bacillus	91061|Bacilli	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	yqjQ	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
PHALIAPI_02269	224308.BSU23790	2.58e-226	624.0	COG0491@1|root,COG0491@2|Bacteria,1TQPX@1239|Firmicutes,4HAV6@91061|Bacilli,1ZCFS@1386|Bacillus	91061|Bacilli	S	COG0491 Zn-dependent hydrolases, including glyoxylases	yqjP	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
PHALIAPI_02270	224308.BSU23800	1.96e-189	527.0	COG0345@1|root,COG0345@2|Bacteria,1TP1E@1239|Firmicutes,4H9RV@91061|Bacilli,1ZCWZ@1386|Bacillus	91061|Bacilli	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline	proC	-	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU18480	F420_oxidored,P5CR_dimer
PHALIAPI_02271	224308.BSU23810	0.0	1075.0	COG4187@1|root,COG4187@2|Bacteria,1TQQ7@1239|Firmicutes,4HABT@91061|Bacilli,1ZCEE@1386|Bacillus	91061|Bacilli	E	arginine degradation protein	rocB	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M20
PHALIAPI_02272	224308.BSU23820	7.02e-245	672.0	COG1902@1|root,COG1902@2|Bacteria,1TPM6@1239|Firmicutes,4H9YM@91061|Bacilli,1ZB4D@1386|Bacillus	91061|Bacilli	C	Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes	namA	GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944	1.6.99.1	ko:K00354	-	-	R00282	RC00001	ko00000,ko01000	-	-	-	Oxidored_FMN
PHALIAPI_02273	224308.BSU23830	3.17e-187	519.0	COG0596@1|root,COG0596@2|Bacteria,1V9D7@1239|Firmicutes,4HK54@91061|Bacilli,1ZEVK@1386|Bacillus	91061|Bacilli	S	hydrolases or acyltransferases (alpha beta hydrolase superfamily)	yqjL	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6,Hydrolase_4
PHALIAPI_02274	326423.RBAM_022140	8.59e-27	97.8	COG0267@1|root,COG0267@2|Bacteria,1VEJ4@1239|Firmicutes,4HNIM@91061|Bacilli,1ZIUS@1386|Bacillus	91061|Bacilli	J	Belongs to the bacterial ribosomal protein bL33 family	rpmG	-	-	ko:K02913	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L33
PHALIAPI_02275	224308.BSU23840	7.66e-222	611.0	COG1234@1|root,COG1234@2|Bacteria,1TRGP@1239|Firmicutes,4HABM@91061|Bacilli,1ZC3J@1386|Bacillus	91061|Bacilli	S	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA	rnz	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0042802,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B,Lactamase_B_2
PHALIAPI_02276	224308.BSU23850	0.0	995.0	COG0364@1|root,COG0364@2|Bacteria,1TPYF@1239|Firmicutes,4HA73@91061|Bacilli,1ZCZ3@1386|Bacillus	91061|Bacilli	G	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone	zwf	-	1.1.1.363,1.1.1.49	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	M00004,M00006,M00008	R00835,R02736,R10907	RC00001,RC00066	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	G6PD_C,G6PD_N
PHALIAPI_02277	224308.BSU23860	0.0	924.0	COG0362@1|root,COG0362@2|Bacteria,1TP4I@1239|Firmicutes,4H9NC@91061|Bacilli,1ZC6M@1386|Bacillus	91061|Bacilli	G	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
PHALIAPI_02278	224308.BSU23870	1.45e-296	809.0	COG0389@1|root,COG0389@2|Bacteria,1TP42@1239|Firmicutes,4HADJ@91061|Bacilli,1ZAZZ@1386|Bacillus	91061|Bacilli	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	dinB	GO:0008150,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0050896	2.7.7.7	ko:K02346	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C,IMS_HHH
PHALIAPI_02279	1274524.BSONL12_07272	3.06e-32	115.0	29RSE@1|root,30CW5@2|Bacteria,1UAGA@1239|Firmicutes,4IKUQ@91061|Bacilli,1ZHPK@1386|Bacillus	91061|Bacilli	-	-	yqzJ	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02280	224308.BSU23890	2.54e-179	501.0	COG0706@1|root,COG0706@2|Bacteria,1TSDN@1239|Firmicutes,4HCC8@91061|Bacilli,1ZE6C@1386|Bacillus	91061|Bacilli	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins	yidC	-	-	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9	-	-	60KD_IMP
PHALIAPI_02281	224308.BSU23900	1.15e-177	494.0	COG3361@1|root,COG3361@2|Bacteria,1UYZQ@1239|Firmicutes,4HEHN@91061|Bacilli,1ZDFC@1386|Bacillus	91061|Bacilli	S	Uncharacterized conserved protein (COG2071)	yqjF	-	-	ko:K09166	-	-	-	-	ko00000	-	-	-	DUF2071
PHALIAPI_02282	224308.BSU23910	3.04e-258	709.0	COG2195@1|root,COG2195@2|Bacteria,1TP3A@1239|Firmicutes,4HA04@91061|Bacilli,1ZBSY@1386|Bacillus	91061|Bacilli	E	COG2195 Di- and tripeptidases	yqjE	-	3.4.11.14,3.4.11.4	ko:K01258,ko:K01263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
PHALIAPI_02283	224308.BSU23920	0.0	984.0	COG4799@1|root,COG4799@2|Bacteria,1TQCV@1239|Firmicutes,4HC50@91061|Bacilli,1ZQ98@1386|Bacillus	91061|Bacilli	I	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)	yqjD	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0072329,GO:1901575	2.1.3.15,6.4.1.3	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00373,M00741	R01859	RC00097,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
PHALIAPI_02284	224308.BSU23930	1.34e-94	276.0	COG0346@1|root,COG0346@2|Bacteria,1V6SC@1239|Firmicutes,4HCP5@91061|Bacilli,1ZHE7@1386|Bacillus	91061|Bacilli	E	COG0346 Lactoylglutathione lyase and related lyases	mce	-	5.1.99.1	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00375,M00376,M00741	R02765,R09979	RC00780,RC02739	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase_4
PHALIAPI_02286	224308.BSU23940	2.41e-128	364.0	COG1376@1|root,COG1376@2|Bacteria,1V26F@1239|Firmicutes,4HG56@91061|Bacilli,1ZGC7@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yqjB	-	-	-	-	-	-	-	-	-	-	-	YkuD
PHALIAPI_02287	224308.BSU23950	1.73e-221	612.0	COG4129@1|root,COG4129@2|Bacteria,1TP2T@1239|Firmicutes,4HAWV@91061|Bacilli,1ZBBI@1386|Bacillus	91061|Bacilli	S	Putative aromatic acid exporter C-terminal domain	yqjA	-	-	-	-	-	-	-	-	-	-	-	ArAE_1,ArAE_1_C
PHALIAPI_02288	224308.BSU23960	1.28e-166	466.0	COG1126@1|root,COG1126@2|Bacteria,1TNYD@1239|Firmicutes,4H9WY@91061|Bacilli,1ZB2E@1386|Bacillus	91061|Bacilli	E	COG1126 ABC-type polar amino acid transport system, ATPase component	artM	-	3.6.3.21	ko:K02028	-	M00236	-	-	ko00000,ko00002,ko01000,ko02000	3.A.1.3	-	-	ABC_tran
PHALIAPI_02289	224308.BSU23970	8.94e-143	404.0	COG0765@1|root,COG0765@2|Bacteria,1TPM3@1239|Firmicutes,4HAS2@91061|Bacilli,1ZBUZ@1386|Bacillus	91061|Bacilli	E	COG0765 ABC-type amino acid transport system, permease component	artQ	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K02029	-	M00236	-	-	ko00000,ko00002,ko02000	3.A.1.3	-	-	BPD_transp_1
PHALIAPI_02290	224308.BSU23980	3.37e-174	486.0	COG0834@1|root,COG0834@2|Bacteria,1TT16@1239|Firmicutes,4HU0X@91061|Bacilli,1ZRKX@1386|Bacillus	91061|Bacilli	ET	Belongs to the bacterial solute-binding protein 3 family	artP	-	-	ko:K02030	-	M00236	-	-	ko00000,ko00002,ko02000	3.A.1.3	-	-	SBP_bac_3
PHALIAPI_02291	224308.BSU23990	3.79e-101	293.0	28NYH@1|root,2ZBVN@2|Bacteria,1V1T3@1239|Firmicutes,4HHZS@91061|Bacilli,1ZFKZ@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0403 family	yqiW	-	-	-	-	-	-	-	-	-	-	-	Disulph_isomer
PHALIAPI_02292	224308.BSU24000	4.94e-213	588.0	COG1597@1|root,COG1597@2|Bacteria,1TRGQ@1239|Firmicutes,4HDR5@91061|Bacilli,1ZCT6@1386|Bacillus	91061|Bacilli	I	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase	bmrU	-	-	-	-	-	-	-	-	-	-	-	DAGK_cat
PHALIAPI_02293	224308.BSU24010	1.03e-265	729.0	COG0477@1|root,COG2814@2|Bacteria,1TS6K@1239|Firmicutes,4HB1V@91061|Bacilli,1ZB90@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	norA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K08153,ko:K19576,ko:K19578	-	M00717,M00765	-	-	ko00000,ko00002,ko02000	2.A.1.2.10,2.A.1.2.70,2.A.1.2.8	-	iYO844.BSU26590	MFS_1,MFS_1_like,Sugar_tr
PHALIAPI_02294	224308.BSU24020	8.69e-193	535.0	COG0789@1|root,COG4978@1|root,COG0789@2|Bacteria,COG4978@2|Bacteria,1V9GA@1239|Firmicutes,4IPYA@91061|Bacilli,1ZH1N@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, mercury resistance	-	-	-	ko:K19575	-	M00765	-	-	ko00000,ko00002,ko03000	-	-	-	GyrI-like,MerR_1
PHALIAPI_02295	224308.BSU24030	3.09e-287	786.0	COG0508@1|root,COG0508@2|Bacteria,1TQSH@1239|Firmicutes,4HBSU@91061|Bacilli,1ZC6F@1386|Bacillus	91061|Bacilli	C	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	bkdB	-	2.3.1.12,2.3.1.168	ko:K00627,ko:K09699	ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200	M00036,M00307	R00209,R02569,R02662,R03174,R04097,R10998	RC00004,RC02727,RC02742,RC02857,RC02870	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
PHALIAPI_02296	224308.BSU24040	6.92e-235	646.0	COG0022@1|root,COG0022@2|Bacteria,1TP3J@1239|Firmicutes,4HAP6@91061|Bacilli,1ZC0X@1386|Bacillus	91061|Bacilli	C	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit	bfmBAB	-	1.2.4.4	ko:K00167,ko:K21417	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU24040	Transket_pyr,Transketolase_C
PHALIAPI_02297	224308.BSU24050	1.92e-238	655.0	COG1071@1|root,COG1071@2|Bacteria,1TQDG@1239|Firmicutes,4HBEQ@91061|Bacilli,1ZCCJ@1386|Bacillus	91061|Bacilli	C	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit	bfmBAA	-	1.2.4.4	ko:K00166	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS07640	E1_dh
PHALIAPI_02298	224308.BSU24060	0.0	932.0	COG1249@1|root,COG1249@2|Bacteria,1TP1W@1239|Firmicutes,4H9Z5@91061|Bacilli,1ZBCS@1386|Bacillus	91061|Bacilli	C	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes	bfmBC	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
PHALIAPI_02299	224308.BSU24070	5.62e-254	697.0	COG3426@1|root,COG3426@2|Bacteria,1TPKE@1239|Firmicutes,4H9QV@91061|Bacilli,1ZC7E@1386|Bacillus	91061|Bacilli	C	Belongs to the acetokinase family	buk	-	2.7.2.7	ko:K00929	ko00650,ko01100,map00650,map01100	-	R01688	RC00002,RC00043	ko00000,ko00001,ko01000	-	-	-	Acetate_kinase
PHALIAPI_02300	224308.BSU24080	1.92e-262	719.0	COG0334@1|root,COG0334@2|Bacteria,1TQU2@1239|Firmicutes,4HAB2@91061|Bacilli,1ZB55@1386|Bacillus	91061|Bacilli	E	Belongs to the Glu Leu Phe Val dehydrogenases family	ldh	-	1.4.1.9	ko:K00263	ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130	-	R01088,R01434,R02196	RC00006,RC00036	ko00000,ko00001,ko01000	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
PHALIAPI_02301	224308.BSU24090	1.74e-198	551.0	COG0280@1|root,COG0280@2|Bacteria,1TRQU@1239|Firmicutes,4HBSK@91061|Bacilli,1ZC49@1386|Bacillus	91061|Bacilli	C	phosphate butyryltransferase	ptb	-	2.3.1.19	ko:K00634	ko00650,ko01100,map00650,map01100	-	R01174	RC00004,RC02816	ko00000,ko00001,ko01000	-	-	iYO844.BSU24090	PTA_PTB
PHALIAPI_02302	224308.BSU24100	0.0	1336.0	COG3290@1|root,COG3829@1|root,COG3290@2|Bacteria,COG3829@2|Bacteria,1TP0E@1239|Firmicutes,4HADT@91061|Bacilli,1ZAZA@1386|Bacillus	91061|Bacilli	KT	Transcriptional regulator	bkdR	-	-	-	-	-	-	-	-	-	-	-	DapB_N,HTH_8,PAS,Sigma54_activat
PHALIAPI_02303	224308.BSU24110	1.56e-46	149.0	2E54T@1|root,32ZXQ@2|Bacteria,1VFDB@1239|Firmicutes,4HNU1@91061|Bacilli,1ZIWH@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2627)	yqzF	-	-	-	-	-	-	-	-	-	-	-	DUF2627
PHALIAPI_02304	224308.BSU24120	1.46e-207	575.0	COG2513@1|root,COG2513@2|Bacteria,1TQVY@1239|Firmicutes,4HCDV@91061|Bacilli,1ZR0A@1386|Bacillus	91061|Bacilli	G	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate	prpB	-	4.1.3.30,5.4.2.9	ko:K01841,ko:K03417	ko00440,ko00640,ko01100,ko01120,ko01130,map00440,map00640,map01100,map01120,map01130	-	R00409,R00661	RC00286,RC00287,RC02792	ko00000,ko00001,ko01000	-	-	-	PEP_mutase
PHALIAPI_02305	224308.BSU24130	0.0	948.0	COG2079@1|root,COG2079@2|Bacteria,1TRR8@1239|Firmicutes,4HAUS@91061|Bacilli,1ZCS6@1386|Bacillus	91061|Bacilli	S	2-methylcitrate dehydratase	prpD	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0047547,GO:0071704	4.2.1.79	ko:K01720	ko00640,map00640	-	R04424	RC01152	ko00000,ko00001,ko01000	-	-	-	MmgE_PrpD
PHALIAPI_02306	224308.BSU24140	7.54e-264	723.0	COG0372@1|root,COG0372@2|Bacteria,1TSRN@1239|Firmicutes,4HAZ9@91061|Bacilli,1ZC80@1386|Bacillus	91061|Bacilli	C	Belongs to the citrate synthase family	mmgD	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0036440,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0046912,GO:0050440,GO:0071704	2.3.3.1	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00740	R00351	RC00004,RC00067	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Citrate_synt
PHALIAPI_02307	224308.BSU24150	1.65e-266	730.0	COG1960@1|root,COG1960@2|Bacteria,1TP57@1239|Firmicutes,4HA2A@91061|Bacilli,1ZBG3@1386|Bacillus	91061|Bacilli	I	acyl-CoA dehydrogenase	mmgC	-	-	ko:K18244	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
PHALIAPI_02308	224308.BSU24160	2.81e-198	550.0	COG1250@1|root,COG1250@2|Bacteria,1TPJS@1239|Firmicutes,4HA59@91061|Bacilli,1ZAYV@1386|Bacillus	91061|Bacilli	I	Dehydrogenase	mmgB	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
PHALIAPI_02309	224308.BSU24170	3.68e-277	758.0	COG0183@1|root,COG0183@2|Bacteria,1TP07@1239|Firmicutes,4H9RJ@91061|Bacilli,1ZB7V@1386|Bacillus	91061|Bacilli	I	Belongs to the thiolase family	mmgA	GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	iYO844.BSU24170	Thiolase_C,Thiolase_N
PHALIAPI_02310	224308.BSU24180	3.39e-168	470.0	COG0584@1|root,COG0584@2|Bacteria,1V3W4@1239|Firmicutes,4HFNQ@91061|Bacilli,1ZFB8@1386|Bacillus	91061|Bacilli	C	glycerophosphoryl diester phosphodiesterase	yqiK	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD
PHALIAPI_02311	224308.BSU24190	1.14e-138	392.0	COG0860@1|root,COG0860@2|Bacteria,1TR6H@1239|Firmicutes,4H9U6@91061|Bacilli,1ZPUS@1386|Bacillus	91061|Bacilli	M	Cell wall hydrolase autolysin	lytC_1	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3,SH3_3,SLH
PHALIAPI_02312	720555.BATR1942_10405	7.85e-36	124.0	2E29G@1|root,32XF4@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PrcB_C
PHALIAPI_02313	224308.BSU24210	4.67e-272	744.0	COG1902@1|root,COG1902@2|Bacteria,1TPM6@1239|Firmicutes,4HAS5@91061|Bacilli,1ZB1N@1386|Bacillus	91061|Bacilli	C	COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family	yqiG	-	-	-	-	-	-	-	-	-	-	-	Oxidored_FMN
PHALIAPI_02315	224308.BSU24220	1.89e-186	518.0	COG0745@1|root,COG0745@2|Bacteria,1TPF7@1239|Firmicutes,4HA1M@91061|Bacilli,1ZBNB@1386|Bacillus	91061|Bacilli	KT	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	spo0A	GO:0000003,GO:0000156,GO:0000160,GO:0000910,GO:0003674,GO:0006355,GO:0007049,GO:0007154,GO:0007165,GO:0008150,GO:0008356,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016043,GO:0019219,GO:0019222,GO:0019954,GO:0022402,GO:0022603,GO:0022607,GO:0023052,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0032506,GO:0035556,GO:0042173,GO:0042710,GO:0043934,GO:0043937,GO:0043938,GO:0044010,GO:0044085,GO:0044764,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051171,GO:0051252,GO:0051301,GO:0051704,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0071840,GO:0080090,GO:0090529,GO:0090604,GO:0090606,GO:1903506,GO:2000112,GO:2001141	-	ko:K07699	ko02020,ko02024,map02020,map02024	M00485	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Spo0A_C
PHALIAPI_02316	224308.BSU24230	1.26e-303	828.0	COG0750@1|root,COG0750@2|Bacteria,1TPIR@1239|Firmicutes,4H9TW@91061|Bacilli,1ZB04@1386|Bacillus	91061|Bacilli	M	Stage IV sporulation protein B	spoIVB	-	3.4.21.116	ko:K06399	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ,PDZ_2,Peptidase_S55
PHALIAPI_02317	224308.BSU24240	0.0	1074.0	COG0497@1|root,COG0497@2|Bacteria,1TP99@1239|Firmicutes,4H9ZR@91061|Bacilli,1ZC8B@1386|Bacillus	91061|Bacilli	L	May be involved in recombinational repair of damaged DNA	recN	GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360	-	ko:K03631	-	-	-	-	ko00000,ko03400	-	-	-	AAA_23,SMC_N
PHALIAPI_02318	224308.BSU24250	8.85e-102	295.0	COG1438@1|root,COG1438@2|Bacteria,1V1R7@1239|Firmicutes,4HFY8@91061|Bacilli,1ZFJ8@1386|Bacillus	91061|Bacilli	K	Regulates arginine biosynthesis genes	argR	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006355,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031326,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901605,GO:1903506,GO:2000112,GO:2001141	-	ko:K03402	-	-	-	-	ko00000,ko03000	-	-	-	Arg_repressor,Arg_repressor_C
PHALIAPI_02319	224308.BSU24260	1.73e-194	541.0	COG1189@1|root,COG1189@2|Bacteria,1TPE4@1239|Firmicutes,4HAPY@91061|Bacilli,1ZBDS@1386|Bacillus	91061|Bacilli	J	rRNA methylase	rrmJ	-	2.1.1.226,2.1.1.227	ko:K06442	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ,S4
PHALIAPI_02320	224308.BSU24270	0.0	1273.0	COG1154@1|root,COG1154@2|Bacteria,1TP37@1239|Firmicutes,4H9QW@91061|Bacilli,1ZBHF@1386|Bacillus	91061|Bacilli	H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)	dxs	-	2.2.1.7	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	M00096	R05636	RC00032	ko00000,ko00001,ko00002,ko01000	-	-	-	DXP_synthase_N,Transket_pyr,Transketolase_C
PHALIAPI_02321	224308.BSU24280	1.2e-208	577.0	COG0142@1|root,COG0142@2|Bacteria,1TPQY@1239|Firmicutes,4HA8E@91061|Bacilli,1ZC4G@1386|Bacillus	91061|Bacilli	H	Belongs to the FPP GGPP synthase family	ispA	GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0071704,GO:1901576	2.5.1.1,2.5.1.10,2.5.1.29	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364,M00366	R01658,R02003,R02061	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	polyprenyl_synt
PHALIAPI_02322	224308.BSU24290	1.09e-51	163.0	COG1722@1|root,COG1722@2|Bacteria,1VK9I@1239|Firmicutes,4HNRB@91061|Bacilli,1ZIVS@1386|Bacillus	91061|Bacilli	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseB	-	3.1.11.6	ko:K03602	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_S
PHALIAPI_02323	224308.BSU24300	3.55e-312	852.0	COG1570@1|root,COG1570@2|Bacteria,1TP4E@1239|Firmicutes,4HAN2@91061|Bacilli,1ZB5Q@1386|Bacillus	91061|Bacilli	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseA	-	3.1.11.6	ko:K03601	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_L,tRNA_anti_2
PHALIAPI_02324	224308.BSU24310	1.51e-200	555.0	COG0190@1|root,COG0190@2|Bacteria,1TP1P@1239|Firmicutes,4H9Q6@91061|Bacilli,1ZC9G@1386|Bacillus	91061|Bacilli	F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	-	THF_DHG_CYH,THF_DHG_CYH_C
PHALIAPI_02325	224308.BSU24320	4.8e-86	253.0	COG0781@1|root,COG0781@2|Bacteria,1VA9B@1239|Firmicutes,4HKMU@91061|Bacilli,1ZH3P@1386|Bacillus	91061|Bacilli	K	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons	nusB	-	-	ko:K03625	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	NusB
PHALIAPI_02326	224308.BSU24330	1.65e-88	260.0	COG1302@1|root,COG1302@2|Bacteria,1V4IC@1239|Firmicutes,4HJ7T@91061|Bacilli,1ZG6N@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yqhY	-	-	-	-	-	-	-	-	-	-	-	Asp23
PHALIAPI_02327	224308.BSU24340	0.0	884.0	COG0439@1|root,COG0439@2|Bacteria,1TP16@1239|Firmicutes,4HARK@91061|Bacilli,1ZC56@1386|Bacillus	91061|Bacilli	I	An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism	accC	-	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
PHALIAPI_02328	224308.BSU24350	3.21e-93	274.0	COG0511@1|root,COG0511@2|Bacteria,1VAB7@1239|Firmicutes,4HKCS@91061|Bacilli,1ZGFF@1386|Bacillus	91061|Bacilli	I	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA	accB	-	-	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742	RC00040,RC00367	ko00000,ko00001,ko00002	-	-	-	Biotin_lipoyl
PHALIAPI_02329	224308.BSU24360	9.92e-135	384.0	29WYG@1|root,30IKQ@2|Bacteria,1V4Y2@1239|Firmicutes,4HI5K@91061|Bacilli,1ZHEH@1386|Bacillus	91061|Bacilli	S	SpoIIIAH-like protein	spoIIIAH	-	-	ko:K06397	-	-	-	-	ko00000	1.A.34.1.1	-	-	SpoIIIAH
PHALIAPI_02330	224308.BSU24370	1.73e-148	419.0	2E6BB@1|root,330Z5@2|Bacteria,1VF3M@1239|Firmicutes,4HH7J@91061|Bacilli,1ZEMQ@1386|Bacillus	91061|Bacilli	S	stage III sporulation protein AG	spoIIIAG	-	-	ko:K06396	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_02331	224308.BSU24380	3.66e-131	374.0	2E7KE@1|root,3322G@2|Bacteria,1VIAM@1239|Firmicutes,4HPYJ@91061|Bacilli,1ZS0K@1386|Bacillus	91061|Bacilli	S	Stage III sporulation protein AF (Spore_III_AF)	spoIIIAF	-	-	ko:K06395	-	-	-	-	ko00000	-	-	-	Spore_III_AF
PHALIAPI_02332	224308.BSU24390	7.65e-257	707.0	2C2CG@1|root,2Z7PW@2|Bacteria,1TQQ2@1239|Firmicutes,4H9UX@91061|Bacilli,1ZCFI@1386|Bacillus	91061|Bacilli	S	stage III sporulation protein AE	spoIIIAE	-	-	ko:K06394	-	-	-	-	ko00000	-	-	-	Spore_III_AE
PHALIAPI_02333	224308.BSU24400	1.93e-77	232.0	2CPUI@1|root,32SJW@2|Bacteria,1VA9Y@1239|Firmicutes,4HIIH@91061|Bacilli,1ZGYV@1386|Bacillus	91061|Bacilli	S	Stage III sporulation protein AD	spoIIIAD	-	-	ko:K06393	-	-	-	-	ko00000	-	-	-	SpoIIIAC
PHALIAPI_02334	1051501.AYTL01000030_gene2610	1.63e-39	131.0	2E555@1|root,32ZY3@2|Bacteria,1VEM4@1239|Firmicutes,4HNG4@91061|Bacilli,1ZQSJ@1386|Bacillus	91061|Bacilli	S	stage III sporulation protein AC	spoIIIAC	-	-	ko:K06392	-	-	-	-	ko00000	-	-	-	SpoIIIAC
PHALIAPI_02335	224308.BSU24420	5.69e-111	320.0	2CEWW@1|root,32S0Q@2|Bacteria,1VAEG@1239|Firmicutes,4HGSK@91061|Bacilli,1ZQIX@1386|Bacillus	91061|Bacilli	S	Stage III sporulation protein	spoIIIAB	-	-	ko:K06391	-	-	-	-	ko00000	-	-	-	Spore_III_AB
PHALIAPI_02336	224308.BSU24430	1.22e-218	603.0	COG3854@1|root,COG3854@2|Bacteria,1TQ23@1239|Firmicutes,4HA2K@91061|Bacilli,1ZAWB@1386|Bacillus	91061|Bacilli	S	stage III sporulation protein AA	spoIIIAA	-	-	ko:K06390	-	-	-	-	ko00000	-	-	-	AAA,T2SSE
PHALIAPI_02337	224308.BSU24440	6.96e-50	159.0	2E4CX@1|root,32Z8B@2|Bacteria,1VEW3@1239|Firmicutes,4HNU3@91061|Bacilli,1ZIYG@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2619)	yqhV	-	-	-	-	-	-	-	-	-	-	-	DUF2619
PHALIAPI_02338	224308.BSU24450	4.8e-128	364.0	COG0231@1|root,COG0231@2|Bacteria,1TR8P@1239|Firmicutes,4H9YX@91061|Bacilli,1ZAT9@1386|Bacillus	91061|Bacilli	J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase	efp	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02356	-	-	-	-	ko00000,ko03012	-	-	-	EFP,EFP_N,Elong-fact-P_C
PHALIAPI_02339	224308.BSU24460	8.58e-249	683.0	COG0006@1|root,COG0006@2|Bacteria,1TQ44@1239|Firmicutes,4HAT7@91061|Bacilli,1ZB4P@1386|Bacillus	91061|Bacilli	E	COG0006 Xaa-Pro aminopeptidase	yqhT	-	3.4.11.9,3.4.13.9	ko:K01262,ko:K01271	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Creatinase_N,Peptidase_M24
PHALIAPI_02340	224308.BSU24470	4.75e-101	293.0	COG0757@1|root,COG0757@2|Bacteria,1V6E8@1239|Firmicutes,4HJ2V@91061|Bacilli,1ZG8H@1386|Bacillus	91061|Bacilli	E	Catalyzes a trans-dehydration via an enolate intermediate	aroQ	-	4.2.1.10	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03084	RC00848	ko00000,ko00001,ko00002,ko01000	-	-	-	DHquinase_II
PHALIAPI_02341	224308.BSU24480	4.64e-120	343.0	29VNZ@1|root,30H6A@2|Bacteria,1V5PG@1239|Firmicutes,4HJV5@91061|Bacilli,1ZBD8@1386|Bacillus	91061|Bacilli	S	Conserved membrane protein YqhR	yqhR	-	-	-	-	-	-	-	-	-	-	-	YqhR
PHALIAPI_02342	224308.BSU24490	5.16e-221	610.0	COG3872@1|root,COG3872@2|Bacteria,1TPBU@1239|Firmicutes,4H9KN@91061|Bacilli,1ZBXJ@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1385)	yqhQ	-	-	-	-	-	-	-	-	-	-	-	DUF1385
PHALIAPI_02343	224308.BSU24500	5.18e-81	241.0	2BYG1@1|root,33M6N@2|Bacteria,1U3TH@1239|Firmicutes,4IC1U@91061|Bacilli,1ZIYH@1386|Bacillus	91061|Bacilli	-	-	yqhP	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02344	224308.BSU24510	2.44e-210	581.0	COG1752@1|root,COG1752@2|Bacteria,1TRJW@1239|Firmicutes,4HB8J@91061|Bacilli,1ZC13@1386|Bacillus	91061|Bacilli	S	esterase of the alpha-beta hydrolase superfamily	yqhO	GO:0003674,GO:0003824,GO:0016787	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
PHALIAPI_02345	224308.BSU24520	1.97e-97	283.0	COG1321@1|root,COG1321@2|Bacteria,1V3IS@1239|Firmicutes,4HH06@91061|Bacilli,1ZFKR@1386|Bacillus	91061|Bacilli	K	Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon	mntR	-	-	ko:K03709	-	-	-	-	ko00000,ko03000	-	-	-	Fe_dep_repr_C,Fe_dep_repress,FeoA
PHALIAPI_02346	224308.BSU24530	9.17e-204	563.0	COG0095@1|root,COG0095@2|Bacteria,1TQ5U@1239|Firmicutes,4HABG@91061|Bacilli,1ZBG2@1386|Bacillus	91061|Bacilli	H	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation	lipM	GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576	6.3.1.20	ko:K03800	ko00785,ko01100,map00785,map01100	-	R07770,R07771,R11143	RC00043,RC00070,RC00090,RC00992,RC02896	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB
PHALIAPI_02347	224308.BSU24540	7.5e-83	245.0	COG0607@1|root,COG0607@2|Bacteria,1VAI7@1239|Firmicutes,4HKCE@91061|Bacilli,1ZGZX@1386|Bacillus	91061|Bacilli	P	COG0607 Rhodanese-related sulfurtransferase	yqhL	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
PHALIAPI_02348	224308.BSU24550	0.0	976.0	COG1003@1|root,COG1003@2|Bacteria,1TPK9@1239|Firmicutes,4HB80@91061|Bacilli,1ZATI@1386|Bacillus	91061|Bacilli	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvPB	-	1.4.4.2	ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	-	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko01000	-	-	-	GDC-P
PHALIAPI_02349	224308.BSU24560	0.0	879.0	COG0403@1|root,COG0403@2|Bacteria,1TQGG@1239|Firmicutes,4HA7P@91061|Bacilli,1ZB0H@1386|Bacillus	91061|Bacilli	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvPA	-	1.4.4.2	ko:K00282	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	-	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko01000	-	-	-	GDC-P
PHALIAPI_02350	224308.BSU24570	5.49e-261	715.0	COG0404@1|root,COG0404@2|Bacteria,1TRKX@1239|Firmicutes,4H9MX@91061|Bacilli,1ZAS5@1386|Bacillus	91061|Bacilli	E	The glycine cleavage system catalyzes the degradation of glycine	gcvT	-	2.1.2.10	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	M00532	R01221,R02300,R04125	RC00022,RC00069,RC00183,RC02834	ko00000,ko00001,ko00002,ko01000	-	-	-	GCV_T,GCV_T_C
PHALIAPI_02351	224308.BSU24580	0.0	1103.0	COG0553@1|root,COG0553@2|Bacteria,1TQ5E@1239|Firmicutes,4H9WB@91061|Bacilli,1ZAR5@1386|Bacillus	91061|Bacilli	L	COG0553 Superfamily II DNA RNA helicases, SNF2 family	yqhH	-	-	-	-	-	-	-	-	-	-	-	Helicase_C,SNF2_N
PHALIAPI_02352	224308.BSU24590	9.14e-197	544.0	2CH5D@1|root,2Z821@2|Bacteria,1TS45@1239|Firmicutes,4HCE9@91061|Bacilli,1ZAXP@1386|Bacillus	91061|Bacilli	S	Bacterial protein YqhG of unknown function	yqhG	-	-	-	-	-	-	-	-	-	-	-	YqhG
PHALIAPI_02353	224308.BSU24600	4.84e-34	116.0	29S6X@1|root,30DBE@2|Bacteria,1UB3V@1239|Firmicutes,4IMGG@91061|Bacilli,1ZK3S@1386|Bacillus	91061|Bacilli	S	Anti-repressor SinI	sinI	-	-	ko:K06372	-	-	-	-	ko00000	-	-	-	SinI
PHALIAPI_02354	1051501.AYTL01000030_gene2630	5.75e-71	214.0	COG1396@1|root,COG1396@2|Bacteria,1VAXE@1239|Firmicutes,4HKHB@91061|Bacilli,1ZHZH@1386|Bacillus	91061|Bacilli	K	transcriptional	sinR	GO:0008150,GO:0009892,GO:0010468,GO:0010605,GO:0010629,GO:0019222,GO:0048519,GO:0050789,GO:0060255,GO:0065007	-	ko:K19449	-	-	-	-	ko00000,ko03000	-	-	-	HTH_3,SinI
PHALIAPI_02355	224308.BSU24620	1.28e-181	506.0	2CA96@1|root,2ZBTW@2|Bacteria,1V2TR@1239|Firmicutes,4HGFJ@91061|Bacilli,1ZC8Q@1386|Bacillus	91061|Bacilli	S	Cell division protein FtsN	tasA_1	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K06336	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_M73
PHALIAPI_02356	224308.BSU24630	1e-95	283.0	COG0681@1|root,COG0681@2|Bacteria,1VH6F@1239|Firmicutes,4HJZA@91061|Bacilli,1ZRQY@1386|Bacillus	91061|Bacilli	U	Signal peptidase	sipW	GO:0003674,GO:0003824,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:0140096,GO:1901564	3.4.21.89	ko:K13280	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
PHALIAPI_02357	224308.BSU24640	2.98e-151	428.0	29RGE@1|root,30CJ7@2|Bacteria,1U9ZM@1239|Firmicutes,4IK7R@91061|Bacilli,1ZFNP@1386|Bacillus	91061|Bacilli	-	-	yqxM	-	-	ko:K19433	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_02358	224308.BSU24650	2.51e-68	207.0	29KX1@1|root,307UH@2|Bacteria,1U288@1239|Firmicutes,4IBSK@91061|Bacilli,1ZHFX@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3889)	yqzG	-	-	-	-	-	-	-	-	-	-	-	DUF3889
PHALIAPI_02359	224308.BSU24660	4.9e-37	124.0	2EKZB@1|root,33ENU@2|Bacteria,1VM73@1239|Firmicutes,4HR7F@91061|Bacilli,1ZJY6@1386|Bacillus	91061|Bacilli	S	YqzE-like protein	yqzE	-	-	-	-	-	-	-	-	-	-	-	YqzE
PHALIAPI_02360	1051501.AYTL01000030_gene2635	3.78e-57	180.0	2BH1G@1|root,32B1U@2|Bacteria,1UB30@1239|Firmicutes,4IMFQ@91061|Bacilli,1ZK26@1386|Bacillus	91061|Bacilli	S	ComG operon protein 7	-	-	-	ko:K02249	-	M00429	-	-	ko00000,ko00002,ko02044	-	-	-	ComGG
PHALIAPI_02361	224308.BSU24680	7.11e-47	152.0	COG4940@1|root,COG4940@2|Bacteria	2|Bacteria	U	Putative Competence protein ComGF	comGF	-	-	ko:K02246,ko:K02248	-	M00429	-	-	ko00000,ko00002,ko02044	-	-	-	ComGF,N_methyl
PHALIAPI_02362	224308.BSU24690	2.43e-76	228.0	2A141@1|root,30P9X@2|Bacteria,1U27V@1239|Firmicutes,4IBS2@91061|Bacilli,1ZHEW@1386|Bacillus	91061|Bacilli	-	-	comGE	-	-	ko:K02247	-	M00429	-	-	ko00000,ko00002,ko02044	-	-	-	-
PHALIAPI_02363	224308.BSU24700	7.66e-91	266.0	COG4970@1|root,COG4970@2|Bacteria	2|Bacteria	NU	protein transport across the cell outer membrane	gspH	-	-	ko:K02246,ko:K02457,ko:K02459,ko:K02672,ko:K08084,ko:K10926	ko03070,ko05111,map03070,map05111	M00331,M00429	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.15,3.A.15.2	-	-	GspH,N_methyl
PHALIAPI_02364	224308.BSU24710	4.39e-62	190.0	COG4537@1|root,COG4537@2|Bacteria,1VFI9@1239|Firmicutes,4HNNT@91061|Bacilli,1ZIXK@1386|Bacillus	91061|Bacilli	U	Required for transformation and DNA binding	comGC	GO:0005575,GO:0005623,GO:0005886,GO:0009986,GO:0016020,GO:0044464,GO:0071944	-	ko:K02245	-	M00429	-	-	ko00000,ko00002,ko02044	-	-	-	N_methyl
PHALIAPI_02365	224308.BSU24720	3.4e-216	599.0	COG1459@1|root,COG1459@2|Bacteria,1U00C@1239|Firmicutes,4HGUA@91061|Bacilli,1ZCQK@1386|Bacillus	91061|Bacilli	NU	COG1459 Type II secretory pathway, component PulF	comGB	-	-	ko:K02244	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.14.1	-	-	T2SSF
PHALIAPI_02366	224308.BSU24730	1.83e-256	703.0	COG2804@1|root,COG2804@2|Bacteria,1TPGE@1239|Firmicutes,4HB0C@91061|Bacilli,1ZBK5@1386|Bacillus	91061|Bacilli	NU	COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB	comGA	-	-	ko:K02243	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.14.1	-	-	T2SSE
PHALIAPI_02367	224308.BSU24740	7.17e-232	637.0	COG0598@1|root,COG0598@2|Bacteria,1UZTE@1239|Firmicutes,4HDNF@91061|Bacilli,1ZD16@1386|Bacillus	91061|Bacilli	P	Mg2 transporter protein	yqxL	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	CorA
PHALIAPI_02368	224308.BSU24750	5.77e-305	833.0	COG1253@1|root,COG1253@2|Bacteria,1TPN0@1239|Firmicutes,4H9SB@91061|Bacilli,1ZBAN@1386|Bacillus	91061|Bacilli	S	COG1253 Hemolysins and related proteins containing CBS domains	yqhB	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
PHALIAPI_02369	224308.BSU24760	2.79e-189	526.0	COG1366@1|root,COG1366@2|Bacteria,1V326@1239|Firmicutes,4HGFQ@91061|Bacilli,1ZPXD@1386|Bacillus	91061|Bacilli	T	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)	yqhA	-	-	ko:K17763	-	-	-	-	ko00000,ko03021	-	-	-	RsbRD_N,STAS
PHALIAPI_02371	224308.BSU24770	7.79e-85	250.0	COG1393@1|root,COG1393@2|Bacteria,1V73M@1239|Firmicutes,4HJDP@91061|Bacilli,1ZHC6@1386|Bacillus	91061|Bacilli	P	Belongs to the ArsC family	yqgZ	-	1.20.4.1	ko:K00537,ko:K16509	-	-	-	-	ko00000,ko01000	-	-	-	ArsC
PHALIAPI_02372	1051501.AYTL01000030_gene2647	1.46e-50	160.0	2E1GI@1|root,32WUX@2|Bacteria,1VB9C@1239|Firmicutes,4HKV2@91061|Bacilli,1ZQN8@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2626)	yqgY	-	-	-	-	-	-	-	-	-	-	-	DUF2626
PHALIAPI_02373	224308.BSU24790	1.07e-155	436.0	COG0491@1|root,COG0491@2|Bacteria,1V6FA@1239|Firmicutes,4HHRQ@91061|Bacilli,1ZC72@1386|Bacillus	91061|Bacilli	S	COG0491 Zn-dependent hydrolases, including glyoxylases	yqgX	-	3.1.2.6	ko:K01069	ko00620,map00620	-	R01736	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	Lactamase_B
PHALIAPI_02374	224308.BSU24800	1.91e-31	110.0	2ES0W@1|root,306VH@2|Bacteria,1VET3@1239|Firmicutes,4I9TK@91061|Bacilli,1ZK2C@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2759)	yqgW	-	-	-	-	-	-	-	-	-	-	-	DUF2759
PHALIAPI_02375	224308.BSU24810	7.34e-66	200.0	COG0011@1|root,COG0011@2|Bacteria,1VC84@1239|Firmicutes,4HMNH@91061|Bacilli,1ZRYU@1386|Bacillus	91061|Bacilli	S	Thiamine-binding protein	yqgV	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Thiamine_BP
PHALIAPI_02376	224308.BSU24820	1.81e-254	697.0	2BAY9@1|root,324E2@2|Bacteria,1V8TN@1239|Firmicutes,4HJ42@91061|Bacilli,1ZESD@1386|Bacillus	91061|Bacilli	-	-	yqgU	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02377	224308.BSU24830	4.64e-278	759.0	COG2866@1|root,COG2866@2|Bacteria,1TP3K@1239|Firmicutes,4HAHN@91061|Bacilli,1ZD1J@1386|Bacillus	91061|Bacilli	E	Gamma-D-glutamyl-L-diamino acid endopeptidase	yqgT	GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005575,GO:0005576,GO:0005615,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0044421,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.19.11	ko:K01308	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	LysM,Peptidase_M14
PHALIAPI_02378	224308.BSU24840	0.0	1244.0	COG1368@1|root,COG1368@2|Bacteria,1TRMA@1239|Firmicutes,4H9S0@91061|Bacilli,1ZBBV@1386|Bacillus	91061|Bacilli	M	Belongs to the LTA synthase family	yqgS	GO:0005575,GO:0005576	2.7.8.20	ko:K01138,ko:K19005	ko00561,ko01100,map00561,map01100	-	R05081,R10849	RC00017	ko00000,ko00001,ko01000	-	-	-	Sulfatase
PHALIAPI_02379	224308.BSU24850	2.81e-231	636.0	COG1940@1|root,COG1940@2|Bacteria,1TPKW@1239|Firmicutes,4HBAU@91061|Bacilli,1ZBV8@1386|Bacillus	91061|Bacilli	G	Glucokinase	glcK	GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044464,GO:0046835,GO:0051156,GO:0071704,GO:1901135	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS07790	ROK
PHALIAPI_02380	224308.BSU24860	9.15e-45	144.0	COG4483@1|root,COG4483@2|Bacteria	2|Bacteria	S	Protein conserved in bacteria	yqgQ	-	-	-	-	-	-	-	-	-	-	-	DUF910
PHALIAPI_02381	224308.BSU24870	0.0	890.0	COG0457@1|root,COG0705@1|root,COG0457@2|Bacteria,COG0705@2|Bacteria,1TQXT@1239|Firmicutes,4HCDF@91061|Bacilli,1ZBV7@1386|Bacillus	91061|Bacilli	O	membrane protein (homolog of Drosophila rhomboid)	gluP	-	3.4.21.105	ko:K19225	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Rhomboid,TPR_2,TPR_8
PHALIAPI_02382	279010.BL05268	3.38e-14	66.6	2BF3K@1|root,328VQ@2|Bacteria,1UB73@1239|Firmicutes,4IMJT@91061|Bacilli,1ZKBA@1386|Bacillus	91061|Bacilli	-	-	yqgO	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02383	224308.BSU24890	2.29e-136	385.0	COG0212@1|root,COG0212@2|Bacteria,1VA91@1239|Firmicutes,4HM35@91061|Bacilli,1ZH1W@1386|Bacillus	91061|Bacilli	H	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family	fthC	GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0030272,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.3.2	ko:K01934	ko00670,ko01100,map00670,map01100	-	R02301	RC00183	ko00000,ko00001,ko01000	-	-	-	5-FTHF_cyc-lig
PHALIAPI_02384	224308.BSU24900	6.25e-29	103.0	COG0267@1|root,COG0267@2|Bacteria,1VEJ4@1239|Firmicutes,4HNIM@91061|Bacilli,1ZIUS@1386|Bacillus	91061|Bacilli	J	Belongs to the bacterial ribosomal protein bL33 family	rpmG	-	-	ko:K02913	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L33
PHALIAPI_02385	224308.BSU24910	2.53e-251	691.0	COG0438@1|root,COG0438@2|Bacteria,1V2NV@1239|Firmicutes,4HE1F@91061|Bacilli,1ZS6K@1386|Bacillus	91061|Bacilli	M	Glycosyl transferases group 1	yqgM	-	2.4.1.250	ko:K15521	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_transf_4,Glycos_transf_1
PHALIAPI_02387	224308.BSU24930	3.42e-68	207.0	2E4ER@1|root,32Z9X@2|Bacteria,1VGCA@1239|Firmicutes,4HS6U@91061|Bacilli,1ZJ5Y@1386|Bacillus	91061|Bacilli	-	-	yqzD	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r4_2
PHALIAPI_02388	224308.BSU24940	1.09e-93	275.0	COG1559@1|root,COG1559@2|Bacteria,1VF1E@1239|Firmicutes,4HQ19@91061|Bacilli,1ZQS7@1386|Bacillus	91061|Bacilli	S	YceG-like family	yqzC	-	-	-	-	-	-	-	-	-	-	-	YceG
PHALIAPI_02389	224308.BSU24950	1.57e-186	518.0	COG1117@1|root,COG1117@2|Bacteria,1TP1M@1239|Firmicutes,4HAB1@91061|Bacilli,1ZBQ5@1386|Bacillus	91061|Bacilli	P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system	pstB	-	3.6.3.27	ko:K02036	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.7	-	iSB619.SA_RS06920	ABC_tran
PHALIAPI_02390	224308.BSU24960	9.78e-190	527.0	COG1117@1|root,COG1117@2|Bacteria,1TP1M@1239|Firmicutes,4HAB1@91061|Bacilli,1ZBQ5@1386|Bacillus	91061|Bacilli	P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system	pstBA	-	3.6.3.27	ko:K02036	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.7	-	-	ABC_tran
PHALIAPI_02391	224308.BSU24970	5.26e-202	560.0	COG0581@1|root,COG0581@2|Bacteria,1TP74@1239|Firmicutes,4HAKF@91061|Bacilli,1ZDAY@1386|Bacillus	91061|Bacilli	P	Phosphate transport system permease	pstA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02038	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	BPD_transp_1
PHALIAPI_02392	224308.BSU24980	7.11e-203	563.0	COG0573@1|root,COG0573@2|Bacteria,1TSPP@1239|Firmicutes,4HC9H@91061|Bacilli,1ZAUU@1386|Bacillus	91061|Bacilli	P	probably responsible for the translocation of the substrate across the membrane	pstC	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02037	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	BPD_transp_1
PHALIAPI_02393	224308.BSU24990	1.06e-204	567.0	COG0226@1|root,COG0226@2|Bacteria,1TQ5X@1239|Firmicutes,4HBEB@91061|Bacilli,1ZB22@1386|Bacillus	91061|Bacilli	P	Phosphate	pstS	GO:0003674,GO:0005488,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015698,GO:0042301,GO:0043167,GO:0043168,GO:0051179,GO:0051234	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like_2
PHALIAPI_02394	224308.BSU25000	0.0	1295.0	COG0768@1|root,COG0768@2|Bacteria,1TQHY@1239|Firmicutes,4HAFX@91061|Bacilli,1ZBJM@1386|Bacillus	91061|Bacilli	M	penicillin-binding protein	pbpA	-	-	ko:K21465,ko:K21466	ko00550,map00550	-	-	-	ko00000,ko00001,ko01011	-	-	-	PBP_dimer,Transpeptidase
PHALIAPI_02395	224308.BSU25010	3.96e-293	802.0	COG0477@1|root,COG0477@2|Bacteria,1TTC8@1239|Firmicutes,4HAPZ@91061|Bacilli,1ZAQ7@1386|Bacillus	91061|Bacilli	EGP	Major facilitator superfamily	yqgE	-	-	ko:K08222	-	-	-	-	ko00000,ko02000	2.A.1.33	-	-	MFS_1
PHALIAPI_02396	224308.BSU25020	1.59e-148	417.0	COG0605@1|root,COG0605@2|Bacteria,1TPXT@1239|Firmicutes,4HA6U@91061|Bacilli,1ZBWK@1386|Bacillus	91061|Bacilli	P	radicals which are normally produced within the cells and which are toxic to biological systems	sodA	GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
PHALIAPI_02397	224308.BSU25030	1.66e-100	292.0	COG2839@1|root,COG2839@2|Bacteria,1V5DQ@1239|Firmicutes,4HHFQ@91061|Bacilli,1ZGBY@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yqgC	-	-	ko:K09793	-	-	-	-	ko00000	-	-	-	DUF456
PHALIAPI_02398	224308.BSU25040	2.74e-168	471.0	COG5521@1|root,COG5521@2|Bacteria,1V2MC@1239|Firmicutes,4HGIF@91061|Bacilli,1ZBMN@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1189)	yqgB	-	-	-	-	-	-	-	-	-	-	-	DUF1189
PHALIAPI_02399	224308.BSU25060	1.64e-62	191.0	COG1388@1|root,COG1388@2|Bacteria	2|Bacteria	M	LysM domain	yqfZ	-	-	ko:K06417	-	-	-	-	ko00000	-	-	-	LysM
PHALIAPI_02400	224308.BSU25070	5.22e-257	706.0	COG0821@1|root,COG0821@2|Bacteria,1TPFR@1239|Firmicutes,4H9S1@91061|Bacilli,1ZCV1@1386|Bacillus	91061|Bacilli	I	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	ispG	GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576	1.17.7.1,1.17.7.3	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R08689,R10859	RC01486	ko00000,ko00001,ko00002,ko01000	-	-	-	GcpE
PHALIAPI_02401	224308.BSU25080	2.04e-81	241.0	COG4709@1|root,COG4709@2|Bacteria,1VEVX@1239|Firmicutes,4HP5D@91061|Bacilli,1ZIJI@1386|Bacillus	91061|Bacilli	S	membrane	yqfX	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02402	224308.BSU25090	1.95e-140	396.0	COG5663@1|root,COG5663@2|Bacteria,1V2IT@1239|Firmicutes,4HG86@91061|Bacilli,1ZDPA@1386|Bacillus	91061|Bacilli	S	Belongs to the 5'(3')-deoxyribonucleotidase family	yqfW	-	-	ko:K05967	-	-	-	-	ko00000	-	-	-	NT5C
PHALIAPI_02403	224308.BSU25100	2.47e-106	306.0	COG0735@1|root,COG0735@2|Bacteria,1V6RI@1239|Firmicutes,4HIGM@91061|Bacilli,1ZG74@1386|Bacillus	91061|Bacilli	P	Belongs to the Fur family	zur	GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	ko:K02076	-	-	-	-	ko00000,ko03000	-	-	-	FUR
PHALIAPI_02404	224308.BSU25110	3.83e-199	553.0	COG1284@1|root,COG1284@2|Bacteria,1TQTP@1239|Firmicutes,4HBV2@91061|Bacilli,1ZCF3@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein conserved in bacteria (DUF2179)	yqfU	-	-	-	-	-	-	-	-	-	-	-	DUF2179,YitT_membrane
PHALIAPI_02405	224308.BSU25120	3.01e-49	157.0	2E5RP@1|root,330GA@2|Bacteria,1VI20@1239|Firmicutes,4HPUF@91061|Bacilli,1ZIUK@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2624)	yqfT	-	-	-	-	-	-	-	-	-	-	-	DUF2624
PHALIAPI_02406	224308.BSU25130	1.21e-213	590.0	COG0648@1|root,COG0648@2|Bacteria,1TP1D@1239|Firmicutes,4HB4F@91061|Bacilli,1ZBYQ@1386|Bacillus	91061|Bacilli	L	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin	nfo	GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	3.1.21.2	ko:K01151	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AP_endonuc_2
PHALIAPI_02407	224308.BSU25140	1.09e-310	847.0	COG0513@1|root,COG0513@2|Bacteria,1TPAP@1239|Firmicutes,4HA98@91061|Bacilli,1ZDG5@1386|Bacillus	91061|Bacilli	JKL	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures	cshB	GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363	3.6.4.13	ko:K05592,ko:K18692	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019	-	-	-	DEAD,Helicase_C
PHALIAPI_02408	224308.BSU25150	3.6e-40	145.0	2ECSV@1|root,336QF@2|Bacteria,1VFWG@1239|Firmicutes,4HP8Y@91061|Bacilli,1ZIWT@1386|Bacillus	91061|Bacilli	S	YqfQ-like protein	yqfQ	-	-	-	-	-	-	-	-	-	-	-	YqfQ
PHALIAPI_02409	224308.BSU25160	6.6e-225	620.0	COG0761@1|root,COG0761@2|Bacteria,1UHT7@1239|Firmicutes,4H9S4@91061|Bacilli,1ZAUG@1386|Bacillus	91061|Bacilli	IM	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis	ispH	-	1.17.7.4	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05884,R08210	RC01137,RC01487	ko00000,ko00001,ko00002,ko01000	-	-	-	LYTB
PHALIAPI_02410	224308.BSU25170	1.79e-267	732.0	COG0327@1|root,COG0327@2|Bacteria,1TQ27@1239|Firmicutes,4H9NY@91061|Bacilli,1ZAPV@1386|Bacillus	91061|Bacilli	S	Belongs to the GTP cyclohydrolase I type 2 NIF3 family	yqfO	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	-	-	-	-	-	-	-	-	-	NIF3
PHALIAPI_02411	224308.BSU25180	5.67e-149	419.0	COG2384@1|root,COG2384@2|Bacteria,1V3I4@1239|Firmicutes,4HHIM@91061|Bacilli,1ZE5B@1386|Bacillus	91061|Bacilli	S	SAM-dependent methyltransferase	trmK	GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.217	ko:K06967	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	TrmK
PHALIAPI_02412	224308.BSU25190	1.61e-81	241.0	COG2010@1|root,COG2010@2|Bacteria,1VA0V@1239|Firmicutes,4HKF3@91061|Bacilli,1ZHVP@1386|Bacillus	91061|Bacilli	C	COG2010 Cytochrome c, mono- and diheme variants	cccA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K13300	-	-	-	-	ko00000	-	-	-	Cytochrome_CBB3
PHALIAPI_02413	1051501.AYTL01000030_gene2689	2.79e-254	699.0	COG0568@1|root,COG0568@2|Bacteria,1TPD6@1239|Firmicutes,4HB1H@91061|Bacilli,1ZAV8@1386|Bacillus	91061|Bacilli	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth	sigA	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_1,Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
PHALIAPI_02414	224308.BSU25210	0.0	1170.0	COG0358@1|root,COG0358@2|Bacteria,1TQ0X@1239|Firmicutes,4HAG2@91061|Bacilli,1ZC16@1386|Bacillus	91061|Bacilli	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB,DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2
PHALIAPI_02415	224308.BSU25230	3.49e-113	325.0	COG1671@1|root,COG1671@2|Bacteria,1V9Z0@1239|Firmicutes,4HM1G@91061|Bacilli,1ZFK7@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0178 family	yqxD	-	-	ko:K09768	-	-	-	-	ko00000	-	-	-	DUF188
PHALIAPI_02416	224308.BSU25240	6.38e-191	530.0	COG1806@1|root,COG1806@2|Bacteria,1TPG0@1239|Firmicutes,4HB0Q@91061|Bacilli,1ZBIT@1386|Bacillus	91061|Bacilli	S	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation	yqfL	-	2.7.11.33,2.7.4.28	ko:K09773	-	-	-	-	ko00000,ko01000	-	-	-	Kinase-PPPase
PHALIAPI_02417	224308.BSU25250	3.29e-144	407.0	COG0517@1|root,COG0517@2|Bacteria,1TRZD@1239|Firmicutes,4HC4C@91061|Bacilli,1ZB0P@1386|Bacillus	91061|Bacilli	K	CBS domain	ccpN	GO:0006355,GO:0007154,GO:0007584,GO:0008150,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0042221,GO:0045013,GO:0045892,GO:0045934,GO:0045990,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0070887,GO:0071496,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141	-	-	-	-	-	-	-	-	-	-	CBS,HTH_11
PHALIAPI_02418	224308.BSU25260	0.0	1320.0	COG0751@1|root,COG0751@2|Bacteria,1TNZ7@1239|Firmicutes,4H9NT@91061|Bacilli,1ZDF3@1386|Bacillus	91061|Bacilli	J	Glycyl-tRNA synthetase beta subunit	glyS	-	6.1.1.14	ko:K01879	ko00970,map00970	M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_1,tRNA_synt_2f
PHALIAPI_02419	224308.BSU25270	2.12e-222	612.0	COG0752@1|root,COG0752@2|Bacteria,1TPW8@1239|Firmicutes,4HBCF@91061|Bacilli,1ZCKP@1386|Bacillus	91061|Bacilli	J	glycyl-tRNA synthetase alpha subunit	glyQ	-	6.1.1.14	ko:K01878	ko00970,map00970	M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2e
PHALIAPI_02420	224308.BSU25280	1.24e-185	515.0	COG1381@1|root,COG1381@2|Bacteria,1UZ19@1239|Firmicutes,4HAHI@91061|Bacilli,1ZAUA@1386|Bacillus	91061|Bacilli	L	Involved in DNA repair and RecF pathway recombination	recO	GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360	-	ko:K03584	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecO_C,RecO_N
PHALIAPI_02421	224308.BSU25289	5.29e-27	98.2	2DKK1@1|root,309RW@2|Bacteria,1U5JZ@1239|Firmicutes,4IFAR@91061|Bacilli,1ZK2R@1386|Bacillus	91061|Bacilli	S	YqzL-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YqzL
PHALIAPI_02422	224308.BSU25290	9.98e-215	593.0	COG1159@1|root,COG1159@2|Bacteria,1TP3R@1239|Firmicutes,4H9WF@91061|Bacilli,1ZCSH@1386|Bacillus	91061|Bacilli	S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism	era	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113	-	ko:K03595	-	-	-	-	ko00000,ko03009,ko03029	-	-	-	KH_2,MMR_HSR1
PHALIAPI_02423	224308.BSU25300	6.71e-93	271.0	COG0295@1|root,COG0295@2|Bacteria,1V6IP@1239|Firmicutes,4HIJ3@91061|Bacilli,1ZG79@1386|Bacillus	91061|Bacilli	F	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis	cdd	GO:0003674,GO:0003824,GO:0004126,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006216,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009116,GO:0009119,GO:0009164,GO:0009972,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0019439,GO:0034641,GO:0034655,GO:0034656,GO:0042454,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046087,GO:0046131,GO:0046133,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658	3.5.4.5	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01878,R02485,R08221	RC00074,RC00514	ko00000,ko00001,ko01000	-	-	iYO844.BSU25300	dCMP_cyt_deam_1
PHALIAPI_02424	224308.BSU25310	4.75e-80	238.0	COG0818@1|root,COG0818@2|Bacteria,1VEGR@1239|Firmicutes,4HNKN@91061|Bacilli,1ZHW0@1386|Bacillus	91061|Bacilli	M	Diacylglycerol kinase	dgkA	-	2.7.1.107,2.7.1.66	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	-	R02240,R05626	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS07900	DAGK_prokar
PHALIAPI_02425	224308.BSU25320	8.68e-106	305.0	COG0319@1|root,COG0319@2|Bacteria,1V6BU@1239|Firmicutes,4HIIE@91061|Bacilli,1ZG7I@1386|Bacillus	91061|Bacilli	S	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA	ybeY	-	-	ko:K07042	-	-	-	-	ko00000,ko03009	-	-	-	UPF0054
PHALIAPI_02426	224308.BSU25330	0.0	1307.0	COG1480@1|root,COG1480@2|Bacteria,1TR1A@1239|Firmicutes,4HAEZ@91061|Bacilli,1ZANS@1386|Bacillus	91061|Bacilli	S	membrane-associated HD superfamily hydrolase	yqfF	-	-	ko:K07037	-	-	-	-	ko00000	-	-	-	7TM-7TMR_HD,7TMR-HDED,HD
PHALIAPI_02428	224308.BSU25340	4.99e-224	618.0	COG1702@1|root,COG1702@2|Bacteria,1TP35@1239|Firmicutes,4HBD5@91061|Bacilli,1ZBVE@1386|Bacillus	91061|Bacilli	T	Phosphate starvation-inducible protein PhoH	phoH	-	-	ko:K06217	-	-	-	-	ko00000	-	-	-	PhoH
PHALIAPI_02429	224308.BSU25350	6e-242	670.0	COG0561@1|root,COG0561@2|Bacteria,1TR3N@1239|Firmicutes,4HC8P@91061|Bacilli,1ZBP7@1386|Bacillus	91061|Bacilli	S	Stage IV sporulation	yqfD	-	-	ko:K06438	-	-	-	-	ko00000	-	-	-	YqfD
PHALIAPI_02430	224308.BSU25360	2.07e-60	186.0	2E4EZ@1|root,32ZA5@2|Bacteria,1VF5C@1239|Firmicutes,4HNQG@91061|Bacilli,1ZHZA@1386|Bacillus	91061|Bacilli	S	sporulation protein YqfC	yqfC	-	-	-	-	-	-	-	-	-	-	-	YabP
PHALIAPI_02431	224308.BSU25370	1.49e-77	233.0	29RH9@1|root,30CK6@2|Bacteria,1UA17@1239|Firmicutes,4IK9T@91061|Bacilli,1ZG2T@1386|Bacillus	91061|Bacilli	-	-	yqfB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02432	1051501.AYTL01000030_gene2706	1.61e-187	526.0	COG4864@1|root,COG4864@2|Bacteria,1TPTD@1239|Firmicutes,4HAIX@91061|Bacilli,1ZD1V@1386|Bacillus	91061|Bacilli	S	UPF0365 protein	yqfA	-	-	-	-	-	-	-	-	-	-	-	YdfA_immunity
PHALIAPI_02433	224308.BSU25390	9.29e-291	796.0	COG1030@1|root,COG1030@2|Bacteria,1TR54@1239|Firmicutes,4H9P9@91061|Bacilli,1ZCTF@1386|Bacillus	91061|Bacilli	O	COG1030 Membrane-bound serine protease (ClpP class)	yqeZ	-	-	ko:K07403	-	-	-	-	ko00000	-	-	-	NfeD,SDH_sah
PHALIAPI_02434	224308.BSU25400	2.25e-90	266.0	COG1610@1|root,COG1610@2|Bacteria,1V6F2@1239|Firmicutes,4HIQP@91061|Bacilli,1ZGGX@1386|Bacillus	91061|Bacilli	S	Yqey-like protein	yqeY	-	-	ko:K09117	-	-	-	-	ko00000	-	-	-	YqeY
PHALIAPI_02435	1178537.BA1_04662	1.03e-26	98.2	COG0828@1|root,COG0828@2|Bacteria,1VEHU@1239|Firmicutes,4HNPV@91061|Bacilli,1ZJ3R@1386|Bacillus	91061|Bacilli	J	Belongs to the bacterial ribosomal protein bS21 family	rpsU	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904	-	ko:K02970	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S21
PHALIAPI_02436	224308.BSU25420	1.91e-199	555.0	COG1283@1|root,COG1283@2|Bacteria,1TP4K@1239|Firmicutes,4HAZ0@91061|Bacilli,1ZBHZ@1386|Bacillus	91061|Bacilli	P	COG1283 Na phosphate symporter	yqeW	-	-	ko:K03324	-	-	-	-	ko00000,ko02000	2.A.58.2	-	-	Na_Pi_cotrans
PHALIAPI_02437	224308.BSU25430	0.0	898.0	COG0621@1|root,COG0621@2|Bacteria,1TPBR@1239|Firmicutes,4HBYZ@91061|Bacilli,1ZB8Q@1386|Bacillus	91061|Bacilli	J	ribosomal protein S12 methylthiotransferase	yqeV	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360	2.8.4.5	ko:K18707	-	-	R10649	RC00003,RC03221	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,TRAM,UPF0004
PHALIAPI_02438	224308.BSU25440	1.68e-179	500.0	COG1385@1|root,COG1385@2|Bacteria,1V1CT@1239|Firmicutes,4HH8P@91061|Bacilli,1ZAV7@1386|Bacillus	91061|Bacilli	J	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	rsmE	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.193	ko:K09761	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_RNA
PHALIAPI_02439	224308.BSU25450	5.63e-226	622.0	COG2264@1|root,COG2264@2|Bacteria,1TPKI@1239|Firmicutes,4HAMF@91061|Bacilli,1ZB7J@1386|Bacillus	91061|Bacilli	J	Methylates ribosomal protein L11	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
PHALIAPI_02440	224308.BSU25460	3.41e-257	706.0	COG0484@1|root,COG0484@2|Bacteria,1TP00@1239|Firmicutes,4H9KA@91061|Bacilli,1ZC0R@1386|Bacillus	91061|Bacilli	O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins	dnaJ	-	-	ko:K03686	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	DnaJ,DnaJ_C,DnaJ_CXXCXGXG
PHALIAPI_02441	224308.BSU25470	0.0	1145.0	COG0443@1|root,COG0443@2|Bacteria,1TP1J@1239|Firmicutes,4HA9S@91061|Bacilli,1ZAZ2@1386|Bacillus	91061|Bacilli	O	Heat shock 70 kDa protein	dnaK	GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0030246,GO:0030247,GO:0044464,GO:0051704,GO:0098630,GO:0098743,GO:2001065	-	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	1.A.33.1	-	-	HSP70
PHALIAPI_02442	224308.BSU25480	4.36e-116	334.0	COG0576@1|root,COG0576@2|Bacteria,1V6G2@1239|Firmicutes,4HIRK@91061|Bacilli,1ZGCW@1386|Bacillus	91061|Bacilli	O	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ	grpE	GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065	-	ko:K03687	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	GrpE
PHALIAPI_02443	224308.BSU25490	1.65e-241	664.0	COG1420@1|root,COG1420@2|Bacteria,1TQP7@1239|Firmicutes,4HAX5@91061|Bacilli,1ZBQV@1386|Bacillus	91061|Bacilli	K	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons	hrcA	GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141	-	ko:K03705	-	-	-	-	ko00000,ko03000	-	-	-	HrcA,HrcA_DNA-bdg
PHALIAPI_02444	224308.BSU25500	1.96e-274	750.0	COG0635@1|root,COG0635@2|Bacteria,1TPES@1239|Firmicutes,4HA60@91061|Bacilli,1ZC7V@1386|Bacillus	91061|Bacilli	H	Involved in the biosynthesis of porphyrin-containing compound	hemN	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	-	-	-	-	-	-	-	-	-	-	HemN_C,Radical_SAM
PHALIAPI_02445	224308.BSU25510	0.0	1183.0	COG0481@1|root,COG0481@2|Bacteria,1TP0G@1239|Firmicutes,4HASA@91061|Bacilli,1ZC7J@1386|Bacillus	91061|Bacilli	M	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner	lepA	-	-	ko:K03596	ko05134,map05134	-	-	-	ko00000,ko00001	-	-	-	EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C
PHALIAPI_02446	224308.BSU25520	7.06e-70	211.0	2C4MB@1|root,345EE@2|Bacteria,1W0SN@1239|Firmicutes,4HP0K@91061|Bacilli,1ZJ36@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3679)	yqxA	-	-	-	-	-	-	-	-	-	-	-	DUF3679
PHALIAPI_02447	224308.BSU25530	3.18e-282	772.0	COG0860@1|root,COG0860@2|Bacteria,1TSFS@1239|Firmicutes,4HACZ@91061|Bacilli,1ZAV0@1386|Bacillus	91061|Bacilli	M	stage II sporulation protein P	spoIIP	-	-	ko:K06385	-	-	-	-	ko00000	-	-	-	SpoIIP
PHALIAPI_02448	224308.BSU25540	3.42e-258	708.0	COG0680@1|root,COG0680@2|Bacteria,1TPFY@1239|Firmicutes,4HAGH@91061|Bacilli,1ZC4A@1386|Bacillus	91061|Bacilli	C	Initiates the rapid degradation of small, acid-soluble proteins during spore germination	gpr	GO:0000003,GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019954,GO:0030436,GO:0032502,GO:0043170,GO:0043934,GO:0044238,GO:0071704,GO:0140096,GO:1901564	3.4.24.78	ko:K06012	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_A25
PHALIAPI_02449	224308.BSU25550	4e-49	157.0	COG0268@1|root,COG0268@2|Bacteria,1VEGX@1239|Firmicutes,4HNJS@91061|Bacilli,1ZI3X@1386|Bacillus	91061|Bacilli	J	Binds directly to 16S ribosomal RNA	rpsT	-	-	ko:K02968	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S20p
PHALIAPI_02450	224308.BSU25560	6.73e-243	668.0	COG1466@1|root,COG1466@2|Bacteria,1TRM0@1239|Firmicutes,4HBB4@91061|Bacilli,1ZBST@1386|Bacillus	91061|Bacilli	L	DNA polymerase III delta subunit	holA	-	2.7.7.7	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta
PHALIAPI_02451	224308.BSU25569	2.36e-22	86.3	2EJUP@1|root,33DJB@2|Bacteria,1VMIR@1239|Firmicutes,4HRA6@91061|Bacilli,1ZK02@1386|Bacillus	91061|Bacilli	S	YqzM-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YqzM
PHALIAPI_02452	224308.BSU25570	0.0	1436.0	COG0658@1|root,COG2333@1|root,COG0658@2|Bacteria,COG2333@2|Bacteria,1TS9U@1239|Firmicutes,4H9M4@91061|Bacilli,1ZBWR@1386|Bacillus	91061|Bacilli	S	Competence protein ComEC	comEC	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	Competence,DUF4131,Lactamase_B
PHALIAPI_02453	224308.BSU25580	3.25e-137	387.0	COG2131@1|root,COG2131@2|Bacteria,1V3PU@1239|Firmicutes,4HEJU@91061|Bacilli,1ZQ4K@1386|Bacillus	91061|Bacilli	F	ComE operon protein 2	comEB	-	3.5.4.12	ko:K01493	ko00240,ko01100,map00240,map01100	M00429	R01663	RC00074	ko00000,ko00001,ko00002,ko01000,ko02044	-	-	-	dCMP_cyt_deam_1
PHALIAPI_02454	224308.BSU25590	9.06e-136	385.0	COG1555@1|root,COG1596@1|root,COG1555@2|Bacteria,COG1596@2|Bacteria,1VA3W@1239|Firmicutes,4HKJ1@91061|Bacilli,1ZH4N@1386|Bacillus	91061|Bacilli	L	COG1555 DNA uptake protein and related DNA-binding proteins	comEA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02237	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	HHH_3,SLBB
PHALIAPI_02455	224308.BSU25600	2.69e-189	526.0	COG0345@1|root,COG0345@2|Bacteria,1UZ3D@1239|Firmicutes,4HCJ6@91061|Bacilli,1ZBFA@1386|Bacillus	91061|Bacilli	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline	comER	-	-	ko:K02239	-	M00429	-	-	ko00000,ko00002,ko02044	-	-	-	F420_oxidored,P5CR_dimer
PHALIAPI_02456	224308.BSU25610	1.39e-178	497.0	COG0500@1|root,COG2226@2|Bacteria,1TQUF@1239|Firmicutes,4HD2W@91061|Bacilli,1ZB0Y@1386|Bacillus	91061|Bacilli	Q	Methyltransferase	yqeM	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
PHALIAPI_02457	224308.BSU25620	1.14e-80	239.0	COG0799@1|root,COG0799@2|Bacteria,1VA2Z@1239|Firmicutes,4HKEJ@91061|Bacilli,1ZGYR@1386|Bacillus	91061|Bacilli	J	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	rsfS	GO:0003674,GO:0005488,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113	-	ko:K09710	-	-	-	-	ko00000,ko03009	-	-	-	RsfS
PHALIAPI_02458	224308.BSU25630	1.61e-131	373.0	COG1713@1|root,COG1713@2|Bacteria,1V6Y1@1239|Firmicutes,4HHRY@91061|Bacilli,1ZCQJ@1386|Bacillus	91061|Bacilli	H	HD superfamily hydrolase involved in NAD metabolism	yqeK	-	-	-	-	-	-	-	-	-	-	-	HD
PHALIAPI_02459	224308.BSU25640	2.47e-141	398.0	COG1057@1|root,COG1057@2|Bacteria,1V3SK@1239|Firmicutes,4HGXK@91061|Bacilli,1ZFIV@1386|Bacillus	91061|Bacilli	H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)	nadD	GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	2.7.7.18	ko:K00969	ko00760,ko01100,map00760,map01100	M00115	R00137,R03005	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
PHALIAPI_02460	224308.BSU25650	8.95e-61	187.0	COG1534@1|root,COG1534@2|Bacteria,1VEGM@1239|Firmicutes,4HKC7@91061|Bacilli,1ZH83@1386|Bacillus	91061|Bacilli	J	RNA-binding protein containing KH domain, possibly ribosomal protein	yhbY	-	-	ko:K07574	-	-	-	-	ko00000,ko03009	-	-	-	CRS1_YhbY
PHALIAPI_02461	224308.BSU25660	2.83e-199	552.0	COG0169@1|root,COG0169@2|Bacteria,1TQRY@1239|Firmicutes,4HD4R@91061|Bacilli,1ZANW@1386|Bacillus	91061|Bacilli	E	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)	aroE	GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615	1.1.1.25	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413	RC00206	ko00000,ko00001,ko00002,ko01000	-	-	-	Shikimate_DH,Shikimate_dh_N
PHALIAPI_02462	224308.BSU25670	4.78e-273	746.0	COG1161@1|root,COG1161@2|Bacteria,1TPM2@1239|Firmicutes,4HAAF@91061|Bacilli,1ZBES@1386|Bacillus	91061|Bacilli	S	In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis	yqeH	GO:0003674,GO:0003824,GO:0003924,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019219,GO:0019222,GO:0022613,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0042254,GO:0044085,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071840,GO:0080090,GO:0090329,GO:2000104,GO:2000112,GO:2000113	-	ko:K06948	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1
PHALIAPI_02463	224308.BSU25680	2.17e-123	351.0	COG2179@1|root,COG2179@2|Bacteria,1V6KM@1239|Firmicutes,4HGAV@91061|Bacilli,1ZFKN@1386|Bacillus	91061|Bacilli	S	hydrolase of the HAD superfamily	yqeG	-	-	ko:K07015	-	-	-	-	ko00000	-	-	-	HAD_2,Hydrolase,Hydrolase_like,PGP_phosphatase
PHALIAPI_02465	224308.BSU25700	2.24e-182	506.0	COG2755@1|root,COG2755@2|Bacteria,1U232@1239|Firmicutes,4IPYB@91061|Bacilli,1ZF2H@1386|Bacillus	91061|Bacilli	E	GDSL-like Lipase/Acylhydrolase	yqeF	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
PHALIAPI_02466	224308.BSU25710	9.35e-174	485.0	COG3409@1|root,COG5632@1|root,COG3409@2|Bacteria,COG5632@2|Bacteria,1V7KT@1239|Firmicutes,4HJ9N@91061|Bacilli,1ZB8D@1386|Bacillus	91061|Bacilli	M	n-acetylmuramoyl-L-alanine amidase	xlyA	-	3.5.1.28	ko:K01447	-	-	R04112	RC00064,RC00141	ko00000,ko01000	-	-	-	Amidase_2,PG_binding_1,SLH
PHALIAPI_02467	224308.BSU25720	1.27e-132	377.0	COG0398@1|root,COG0398@2|Bacteria,1VIP7@1239|Firmicutes,4HK4G@91061|Bacilli,1ZRQW@1386|Bacillus	91061|Bacilli	S	SNARE associated Golgi protein	yqeD	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
PHALIAPI_02468	224308.BSU25730	7.31e-215	593.0	COG1023@1|root,COG1023@2|Bacteria,1UHN4@1239|Firmicutes,4IS44@91061|Bacilli,1ZS1B@1386|Bacillus	91061|Bacilli	G	6-phosphogluconate dehydrogenase	yqeC	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
PHALIAPI_02469	224308.BSU25740	1.43e-165	463.0	28NWW@1|root,2ZBUP@2|Bacteria,1V3CS@1239|Firmicutes,4HGW3@91061|Bacilli,1ZQK7@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02470	224308.BSU25750	2.53e-97	282.0	COG3209@1|root,COG3209@2|Bacteria,1V89J@1239|Firmicutes,4HJVE@91061|Bacilli,1ZH27@1386|Bacillus	91061|Bacilli	M	Deoxyribonuclease NucA/NucB	nucB	GO:0005575,GO:0005576	-	-	-	-	-	-	-	-	-	-	DNase_NucA_NucB
PHALIAPI_02471	1051501.AYTL01000030_gene2744	7.53e-161	452.0	COG1191@1|root,COG1191@2|Bacteria,1TPJ5@1239|Firmicutes,4HBY2@91061|Bacilli,1ZB3Q@1386|Bacillus	91061|Bacilli	K	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	sigK	GO:0000003,GO:0000988,GO:0000990,GO:0003674,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0043934,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141	-	ko:K03091	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4
PHALIAPI_02473	224308.BSU26410	2.15e-90	265.0	COG3223@1|root,COG3223@2|Bacteria,1VCG5@1239|Firmicutes,4HKQN@91061|Bacilli,1ZI7B@1386|Bacillus	91061|Bacilli	S	Protein PsiE homolog	psiE	-	-	ko:K13256	-	-	-	-	ko00000	-	-	-	PsiE
PHALIAPI_02474	224308.BSU26420	9.54e-302	824.0	COG0642@1|root,COG5002@1|root,COG0642@2|Bacteria,COG5002@2|Bacteria,1UIF3@1239|Firmicutes,4HHMV@91061|Bacilli,1ZF3Q@1386|Bacillus	91061|Bacilli	T	Histidine kinase	yrkQ	-	-	-	-	-	-	-	-	-	-	-	HisKA
PHALIAPI_02475	224308.BSU26430	1.39e-161	452.0	COG0745@1|root,COG0745@2|Bacteria,1TP9M@1239|Firmicutes,4HB3T@91061|Bacilli,1ZCRU@1386|Bacillus	91061|Bacilli	T	Transcriptional regulator	yrkP	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_02476	224308.BSU26440	1.02e-280	768.0	COG2311@1|root,COG2311@2|Bacteria,1TQNS@1239|Firmicutes,4HCR3@91061|Bacilli,1ZBX3@1386|Bacillus	91061|Bacilli	P	Protein of unknown function (DUF418)	yrkO	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
PHALIAPI_02477	224308.BSU26450	1.01e-129	368.0	COG0454@1|root,COG0454@2|Bacteria,1UHQ4@1239|Firmicutes,4HKZ0@91061|Bacilli,1ZGRK@1386|Bacillus	91061|Bacilli	K	Acetyltransferase (GNAT) family	yrkN	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_02478	1384057.CD33_03745	3.36e-78	233.0	COG1733@1|root,COG1733@2|Bacteria,1VA9M@1239|Firmicutes,4IE85@91061|Bacilli,3IZIZ@400634|Lysinibacillus	91061|Bacilli	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
PHALIAPI_02479	1051501.AYTL01000030_gene2250	8.97e-171	477.0	COG1028@1|root,COG1028@2|Bacteria,1UZSG@1239|Firmicutes,4HF5D@91061|Bacilli,1ZCT4@1386|Bacillus	91061|Bacilli	IQ	Enoyl-(Acyl carrier protein) reductase	ykvO	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
PHALIAPI_02480	1444310.JANV01000174_gene1505	1.62e-35	127.0	2DPQ7@1|root,332Y6@2|Bacteria,1VGDY@1239|Firmicutes,4HPX0@91061|Bacilli,1ZJA0@1386|Bacillus	91061|Bacilli	S	SMI1-KNR4 cell-wall	-	-	-	-	-	-	-	-	-	-	-	-	Colicin-DNase,SMI1_KNR4,SUKH_6
PHALIAPI_02481	326423.RBAM_012010	1.69e-40	136.0	29RT6@1|root,30CX2@2|Bacteria,1UAHI@1239|Firmicutes,4IKW2@91061|Bacilli,1ZI09@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02483	224308.BSU25900	7.92e-164	462.0	COG3409@1|root,COG5632@1|root,COG3409@2|Bacteria,COG5632@2|Bacteria,1V5B9@1239|Firmicutes,4HJY4@91061|Bacilli,1ZIM6@1386|Bacillus	91061|Bacilli	M	N-acetylmuramoyl-L-alanine amidase	-	-	3.5.1.28	ko:K01447	-	-	R04112	RC00064,RC00141	ko00000,ko01000	-	-	-	Amidase_2,LysM,PG_binding_1
PHALIAPI_02484	224308.BSU25910	2.3e-86	255.0	COG4824@1|root,COG4824@2|Bacteria,1V5S1@1239|Firmicutes,4HIAA@91061|Bacilli,1ZHHN@1386|Bacillus	91061|Bacilli	S	Bacteriophage holin family	-	-	-	-	-	-	-	-	-	-	-	-	Phage_holin_4_1
PHALIAPI_02485	224308.BSU25920	1.02e-18	83.2	29TBY@1|root,30EJ0@2|Bacteria,1UCMF@1239|Firmicutes,4IP3K@91061|Bacilli,1ZPBV@1386|Bacillus	91061|Bacilli	-	-	xepA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02486	279010.BL02047	4.54e-205	566.0	COG1409@1|root,COG1409@2|Bacteria,1TT7M@1239|Firmicutes,4HBTM@91061|Bacilli,1ZAWR@1386|Bacillus	91061|Bacilli	S	Carbohydrate esterase, sialic acid-specific acetylesterase	-	-	-	-	-	-	-	-	-	-	-	-	SASA
PHALIAPI_02487	326423.RBAM_024060	2.25e-118	339.0	COG1695@1|root,COG1695@2|Bacteria,1TSNN@1239|Firmicutes,4HG0U@91061|Bacilli,1ZGTA@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
PHALIAPI_02488	224308.BSU26370	1.1e-125	357.0	COG0563@1|root,COG0563@2|Bacteria,1UJD5@1239|Firmicutes,4HB5Z@91061|Bacilli,1ZNE0@1386|Bacillus	91061|Bacilli	F	adenylate kinase activity	yqaC	-	-	-	-	-	-	-	-	-	-	-	AAA_18,SKI
PHALIAPI_02490	224308.BSU26380	3.3e-116	338.0	COG2856@1|root,COG2856@2|Bacteria,1VF4T@1239|Firmicutes,4HP2V@91061|Bacilli,1ZIKA@1386|Bacillus	91061|Bacilli	E	IrrE N-terminal-like domain	xkdA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M78
PHALIAPI_02491	1051501.AYTL01000030_gene2745	5.4e-18	76.3	COG1961@1|root,COG1961@2|Bacteria	2|Bacteria	L	recombinase activity	cisA2	GO:0000150,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140097,GO:1901360	-	ko:K06400	-	-	-	-	ko00000	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
PHALIAPI_02492	224308.BSU26470	2.33e-125	356.0	COG2249@1|root,COG2249@2|Bacteria,1V4UF@1239|Firmicutes,4HIR3@91061|Bacilli,1ZRNF@1386|Bacillus	91061|Bacilli	S	Flavodoxin-like fold	yrkL	-	-	ko:K11748	-	-	-	-	ko00000,ko02000	2.A.37.1.2	-	-	Flavodoxin_2
PHALIAPI_02493	224308.BSU26480	8.63e-102	295.0	28P6Z@1|root,2ZC1H@2|Bacteria,1V318@1239|Firmicutes,4HFZ4@91061|Bacilli,1ZH6Z@1386|Bacillus	91061|Bacilli	S	Protein of unknown function with HXXEE motif	-	-	-	-	-	-	-	-	-	-	-	-	HXXEE
PHALIAPI_02494	935837.JAEK01000016_gene1247	3.27e-81	242.0	COG1846@1|root,COG1846@2|Bacteria,1TTN0@1239|Firmicutes,4IKCM@91061|Bacilli,1ZGFN@1386|Bacillus	91061|Bacilli	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_02495	1403313.AXBR01000024_gene4512	3.8e-78	233.0	COG0607@1|root,COG0607@2|Bacteria,1VJIW@1239|Firmicutes,4IFTU@91061|Bacilli,1ZGFI@1386|Bacillus	91061|Bacilli	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
PHALIAPI_02497	1051501.AYTL01000030_gene2753	4.74e-248	683.0	COG0457@1|root,COG0457@2|Bacteria,1UV6V@1239|Firmicutes,4I408@91061|Bacilli,1ZE93@1386|Bacillus	91061|Bacilli	S	Aspartate phosphatase response regulator	-	-	-	ko:K06366	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	-	-	TPR_12,TPR_8
PHALIAPI_02498	326423.RBAM_012020	1.98e-206	598.0	COG5444@1|root,COG5444@2|Bacteria,1UV7V@1239|Firmicutes,4IA24@91061|Bacilli,1ZPRY@1386|Bacillus	91061|Bacilli	S	Bacterial EndoU nuclease	-	-	-	-	-	-	-	-	-	-	-	-	EndoU_bacteria
PHALIAPI_02499	1178537.BA1_18594	1.64e-63	196.0	2EK7Z@1|root,33DYB@2|Bacteria,1VNRC@1239|Firmicutes,4HSD2@91061|Bacilli,1ZJUS@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02500	1444306.JFZC01000063_gene1007	1.47e-33	119.0	29RT6@1|root,33YU2@2|Bacteria,1VWNQ@1239|Firmicutes,4HX7Z@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02503	1274524.BSONL12_04888	9.6e-160	449.0	COG0477@1|root,COG2814@2|Bacteria,1VTXD@1239|Firmicutes,4HTZ6@91061|Bacilli,1ZDTT@1386|Bacillus	91061|Bacilli	EGP	Necrosis inducing protein (NPP1)	-	-	-	-	-	-	-	-	-	-	-	-	NPP1
PHALIAPI_02504	224308.BSU26580	1.69e-192	534.0	COG0789@1|root,COG4978@1|root,COG0789@2|Bacteria,COG4978@2|Bacteria,1V48S@1239|Firmicutes,4HGJF@91061|Bacilli,1ZQ1U@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, mercury resistance	bltR	-	-	-	-	-	-	-	-	-	-	-	GyrI-like,MerR_1
PHALIAPI_02505	224308.BSU26590	2.08e-266	732.0	COG0477@1|root,COG2814@2|Bacteria,1TS6K@1239|Firmicutes,4HB1V@91061|Bacilli,1ZB90@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	blt	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K08153,ko:K19578	-	M00717,M00765	-	-	ko00000,ko00002,ko02000	2.A.1.2.70,2.A.1.2.8	-	iYO844.BSU26590	MFS_1,MFS_1_like,MFS_2,Sugar_tr
PHALIAPI_02506	224308.BSU26600	6.19e-108	310.0	COG0454@1|root,COG0456@2|Bacteria,1VBFC@1239|Firmicutes,4HJG1@91061|Bacilli,1ZQF0@1386|Bacillus	91061|Bacilli	K	FR47-like protein	bltD	-	2.3.1.57	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	M00135	R01154	RC00004,RC00096	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU26600	Acetyltransf_1
PHALIAPI_02507	224308.BSU26610	1.39e-295	808.0	COG1253@1|root,COG1253@2|Bacteria,1TPN0@1239|Firmicutes,4H9SB@91061|Bacilli,1ZBAN@1386|Bacillus	91061|Bacilli	S	COG1253 Hemolysins and related proteins containing CBS domains	yrkA	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
PHALIAPI_02508	224308.BSU26619	2.45e-23	89.0	29TCA@1|root,30EJC@2|Bacteria,1UCMX@1239|Firmicutes,4IP42@91061|Bacilli,1ZPCH@1386|Bacillus	91061|Bacilli	S	YrzO-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YrzO
PHALIAPI_02509	224308.BSU26620	5.73e-215	595.0	COG0697@1|root,COG0697@2|Bacteria,1UZGC@1239|Firmicutes,4HDET@91061|Bacilli,1ZD9P@1386|Bacillus	91061|Bacilli	EG	EamA-like transporter family	yrdR	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_02510	224308.BSU26630	2.83e-203	563.0	COG0583@1|root,COG0583@2|Bacteria,1UYHT@1239|Firmicutes,4HETP@91061|Bacilli,1ZQ2D@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
PHALIAPI_02511	224308.BSU26640	1.32e-248	682.0	COG2072@1|root,COG2072@2|Bacteria,1UG83@1239|Firmicutes,4HAFV@91061|Bacilli,1ZC6B@1386|Bacillus	91061|Bacilli	P	Oxidoreductase	trkA	-	-	ko:K07222	-	-	-	-	ko00000	-	-	-	FMO-like,Pyr_redox_3
PHALIAPI_02512	224308.BSU26650	8.16e-211	584.0	COG1230@1|root,COG1230@2|Bacteria,1TR92@1239|Firmicutes,4HBCQ@91061|Bacilli,1ZB56@1386|Bacillus	91061|Bacilli	P	COG1230 Co Zn Cd efflux system component	czcD	-	-	ko:K16264	-	-	-	-	ko00000,ko02000	2.A.4.1	-	-	Cation_efflux,ZT_dimer
PHALIAPI_02513	224308.BSU26660	1.44e-86	254.0	COG1942@1|root,COG1942@2|Bacteria,1V3SS@1239|Firmicutes,4HI9G@91061|Bacilli,1ZG7P@1386|Bacillus	91061|Bacilli	S	tautomerase	yodA	-	-	-	-	-	-	-	-	-	-	-	Tautomerase_2
PHALIAPI_02514	224308.BSU26670	2.15e-206	571.0	COG0583@1|root,COG0583@2|Bacteria,1UCV1@1239|Firmicutes,4HE6I@91061|Bacilli,1ZDHP@1386|Bacillus	91061|Bacilli	K	LysR substrate binding domain	-	-	-	ko:K21959	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
PHALIAPI_02515	224308.BSU26690	2.03e-291	798.0	COG1114@1|root,COG1114@2|Bacteria,1TQIS@1239|Firmicutes,4HAKA@91061|Bacilli,1ZAST@1386|Bacillus	91061|Bacilli	E	Component of the transport system for branched-chain amino acids	brnQ	GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903785,GO:1903825,GO:1905039	-	ko:K03311	-	-	-	-	ko00000	2.A.26	-	-	Branch_AA_trans
PHALIAPI_02516	224308.BSU26700	3.26e-65	199.0	COG1687@1|root,COG1687@2|Bacteria,1V9YS@1239|Firmicutes,4HJID@91061|Bacilli,1ZHEG@1386|Bacillus	91061|Bacilli	E	Branched-chain amino acid transport protein (AzlD)	azlD	-	-	-	-	-	-	-	-	-	-	-	AzlD
PHALIAPI_02517	224308.BSU26710	9.34e-176	490.0	COG1296@1|root,COG1296@2|Bacteria,1TP8P@1239|Firmicutes,4IQZH@91061|Bacilli,1ZRPV@1386|Bacillus	91061|Bacilli	E	AzlC protein	azlC	-	-	-	-	-	-	-	-	-	-	-	AzlC
PHALIAPI_02518	224308.BSU26720	9.74e-103	298.0	COG1522@1|root,COG1522@2|Bacteria,1V319@1239|Firmicutes,4HFNU@91061|Bacilli,1ZD2Z@1386|Bacillus	91061|Bacilli	K	helix_turn_helix ASNC type	bkdR	GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0043200,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
PHALIAPI_02519	224308.BSU26730	1.16e-25	96.3	COG2732@1|root,COG2732@2|Bacteria,1VFHP@1239|Firmicutes,4HS3R@91061|Bacilli,1ZJ2M@1386|Bacillus	91061|Bacilli	K	ribonuclease inhibitor	yrdF	-	-	ko:K03623	-	-	-	-	ko00000	-	-	-	Barstar
PHALIAPI_02520	224308.BSU26740	2.33e-282	773.0	COG2124@1|root,COG2124@2|Bacteria,1TPWZ@1239|Firmicutes,4HAGS@91061|Bacilli,1ZC1Y@1386|Bacillus	91061|Bacilli	C	Cytochrome P450	cypA	GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005506,GO:0006066,GO:0006082,GO:0006629,GO:0006706,GO:0006707,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008395,GO:0009056,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016042,GO:0016053,GO:0016125,GO:0016127,GO:0016491,GO:0016705,GO:0016709,GO:0016713,GO:0017144,GO:0018130,GO:0019752,GO:0020037,GO:0032787,GO:0034641,GO:0036199,GO:0042364,GO:0042440,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0046148,GO:0046164,GO:0046394,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1902652	1.14.14.46,1.14.15.13	ko:K15468,ko:K16593,ko:K17474	ko00780,ko01100,map00780,map01100	M00573	R10123	-	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	-	-	-	p450
PHALIAPI_02521	224308.BSU26760	7.38e-131	371.0	COG1335@1|root,COG1335@2|Bacteria,1V70H@1239|Firmicutes,4HJXC@91061|Bacilli,1ZG9B@1386|Bacillus	91061|Bacilli	Q	Isochorismatase family	yrdC	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
PHALIAPI_02522	224308.BSU26770	1.48e-71	216.0	2ED2V@1|root,336ZS@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF2568)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2568
PHALIAPI_02524	224308.BSU26780	1.66e-117	336.0	COG2318@1|root,COG2318@2|Bacteria,1TSEV@1239|Firmicutes,4HCNJ@91061|Bacilli,1ZQV0@1386|Bacillus	91061|Bacilli	S	DinB family	yrdA	-	-	-	-	-	-	-	-	-	-	-	DinB
PHALIAPI_02525	224308.BSU26790	1.42e-210	581.0	2DB8K@1|root,2Z7S1@2|Bacteria,1TRA1@1239|Firmicutes,4HBIE@91061|Bacilli,1ZE40@1386|Bacillus	91061|Bacilli	G	Streptomycin adenylyltransferase	aadK	-	-	ko:K05593	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Adenyl_transf
PHALIAPI_02526	224308.BSU26800	9.97e-245	672.0	COG2070@1|root,COG2070@2|Bacteria,1TPC3@1239|Firmicutes,4H9T0@91061|Bacilli,1ZBXS@1386|Bacillus	91061|Bacilli	S	COG2070 Dioxygenases related to 2-nitropropane dioxygenase	npd	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
PHALIAPI_02527	224308.BSU26810	4.15e-189	525.0	COG0796@1|root,COG0796@2|Bacteria,1TPPR@1239|Firmicutes,4HBW9@91061|Bacilli,1ZG4P@1386|Bacillus	91061|Bacilli	M	Provides the (R)-glutamate required for cell wall biosynthesis	murI	GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	5.1.1.3	ko:K01776	ko00471,ko01100,map00471,map01100	-	R00260	RC00302	ko00000,ko00001,ko01000,ko01011	-	-	-	Asp_Glu_race
PHALIAPI_02528	224308.BSU26820	1.33e-161	453.0	2CQ69@1|root,32SKI@2|Bacteria,1VCJR@1239|Firmicutes,4HNF9@91061|Bacilli,1ZFBY@1386|Bacillus	91061|Bacilli	S	Domain of unknown function, YrpD	yrpD	-	-	-	-	-	-	-	-	-	-	-	YrpD
PHALIAPI_02529	224308.BSU26830	1.08e-168	472.0	COG3443@1|root,COG3443@2|Bacteria,1UI6E@1239|Firmicutes,4ISFG@91061|Bacilli,1ZS5B@1386|Bacillus	91061|Bacilli	S	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment	zinT	-	-	ko:K09815	ko02010,map02010	M00242	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15.3,3.A.1.15.5	-	-	Strep_his_triad,ZinT
PHALIAPI_02530	224308.BSU26840	3.04e-122	348.0	COG1595@1|root,COG1595@2|Bacteria,1V3G9@1239|Firmicutes,4HW99@91061|Bacilli,1ZMXR@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
PHALIAPI_02531	224308.BSU26850	5.72e-238	654.0	COG0667@1|root,COG0667@2|Bacteria,1UY4A@1239|Firmicutes,4HBZD@91061|Bacilli,1ZQG9@1386|Bacillus	91061|Bacilli	C	Aldo/keto reductase family	yrpG	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
PHALIAPI_02532	224308.BSU26890	1.92e-200	555.0	COG3409@1|root,COG3409@2|Bacteria,1VCJN@1239|Firmicutes,4HTZB@91061|Bacilli	91061|Bacilli	M	Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan	csn	GO:0003674,GO:0003824,GO:0004553,GO:0016787,GO:0016798,GO:0016977	3.2.1.132	ko:K01233	ko00520,ko01100,map00520,map01100	-	R02833	-	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_46
PHALIAPI_02533	224308.BSU26900	1.45e-55	173.0	COG5566@1|root,COG5566@2|Bacteria,1VEZS@1239|Firmicutes,4HNM8@91061|Bacilli,1ZHZQ@1386|Bacillus	91061|Bacilli	S	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	yraL	-	-	-	-	-	-	-	-	-	-	-	Mor
PHALIAPI_02534	224308.BSU26910	1.32e-189	526.0	COG0596@1|root,COG0596@2|Bacteria,1VHJX@1239|Firmicutes,4HQIV@91061|Bacilli,1ZD51@1386|Bacillus	91061|Bacilli	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
PHALIAPI_02535	224308.BSU26920	6.61e-80	237.0	COG3103@1|root,COG4991@2|Bacteria,1VRDW@1239|Firmicutes,4HTEI@91061|Bacilli,1ZPM0@1386|Bacillus	91061|Bacilli	T	sh3 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
PHALIAPI_02536	224308.BSU26930	2.92e-81	241.0	COG3103@1|root,COG4991@2|Bacteria,1VRDW@1239|Firmicutes,4HTEI@91061|Bacilli,1ZPM0@1386|Bacillus	91061|Bacilli	T	sh3 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
PHALIAPI_02537	224308.BSU26940	5.45e-86	253.0	COG0346@1|root,COG0346@2|Bacteria,1V9KE@1239|Firmicutes,4HK92@91061|Bacilli,1ZK71@1386|Bacillus	91061|Bacilli	E	Glyoxalase-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase,Glyoxalase_2
PHALIAPI_02538	224308.BSU26950	1.2e-49	157.0	2DA30@1|root,347MA@2|Bacteria,1W180@1239|Firmicutes,4HYA3@91061|Bacilli,1ZQW3@1386|Bacillus	91061|Bacilli	-	-	yraG	-	-	ko:K06440	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_02539	224308.BSU26960	9.61e-84	247.0	COG5577@1|root,COG5577@2|Bacteria,1V4E3@1239|Firmicutes,4HH3T@91061|Bacilli,1ZH5H@1386|Bacillus	91061|Bacilli	M	Spore coat protein	yraF	-	-	-	-	-	-	-	-	-	-	-	Coat_F
PHALIAPI_02540	224308.BSU26970	6.88e-279	761.0	COG1063@1|root,COG1063@2|Bacteria,1TPIW@1239|Firmicutes,4HB2G@91061|Bacilli,1ZB9D@1386|Bacillus	91061|Bacilli	E	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases	adhB	-	1.1.1.1,1.1.1.284,1.2.1.46	ko:K00121,ko:K00148	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	-	R00604,R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00188,RC00649,RC01715,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_N_assoc,ADH_zinc_N
PHALIAPI_02541	224308.BSU26980	3.54e-35	120.0	2EGYD@1|root,33AQH@2|Bacteria,1VK4Z@1239|Firmicutes,4HRB4@91061|Bacilli,1ZJAB@1386|Bacillus	91061|Bacilli	-	-	yraE	-	-	ko:K06440	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_02542	224308.BSU26990	2e-63	194.0	COG5577@1|root,COG5577@2|Bacteria,1VB60@1239|Firmicutes,4HM7J@91061|Bacilli,1ZI7J@1386|Bacillus	91061|Bacilli	M	Spore coat protein	yraD	-	-	ko:K06439	-	-	-	-	ko00000	-	-	-	Coat_F
PHALIAPI_02543	224308.BSU27000	9.08e-68	208.0	COG0789@1|root,COG0789@2|Bacteria,1VAAP@1239|Firmicutes,4HKZ9@91061|Bacilli,1ZHPE@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, mercury resistance	adhR	-	-	ko:K21745	-	-	-	-	ko00000,ko03000	-	-	-	MerR,MerR_1
PHALIAPI_02544	224308.BSU27009	1.11e-33	116.0	COG0599@1|root,COG0599@2|Bacteria	2|Bacteria	S	peroxiredoxin activity	yphJ	-	4.1.1.44	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03470	RC00938	ko00000,ko00001,ko01000	-	-	-	CMD
PHALIAPI_02545	224308.BSU27010	5.39e-250	686.0	COG1064@1|root,COG1064@2|Bacteria,1TP5B@1239|Firmicutes,4HA9Z@91061|Bacilli,1ZB8Z@1386|Bacillus	91061|Bacilli	C	alcohol dehydrogenase	adhA	-	-	ko:K13979	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
PHALIAPI_02546	224308.BSU27020	1.58e-116	333.0	COG0693@1|root,COG0693@2|Bacteria,1V3I7@1239|Firmicutes,4HFNG@91061|Bacilli,1ZFMH@1386|Bacillus	91061|Bacilli	S	protease	yfkM	-	3.5.1.124	ko:K05520	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DJ-1_PfpI
PHALIAPI_02547	224308.BSU27030	0.0	1368.0	COG1621@1|root,COG1621@2|Bacteria,1TS4M@1239|Firmicutes,4HC82@91061|Bacilli,1ZPVF@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 32 family	sacC	GO:0003674,GO:0003824,GO:0004553,GO:0004564,GO:0005975,GO:0005984,GO:0005985,GO:0005987,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016052,GO:0016787,GO:0016798,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0046352,GO:0071704,GO:1901575	3.2.1.80	ko:K03332	ko00051,map00051	-	R00879	-	ko00000,ko00001,ko01000	-	-	-	Big_2,CW_binding_1,Cadherin-like,Glyco_hydro_32C,Glyco_hydro_32N
PHALIAPI_02548	224308.BSU27040	1.39e-192	535.0	COG3716@1|root,COG3716@2|Bacteria,1TQA3@1239|Firmicutes,4HA3K@91061|Bacilli,1ZCPZ@1386|Bacillus	91061|Bacilli	G	COG3716 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IID	levG	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034219,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944	-	ko:K02771,ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	M00276,M00304	R02630,R03232	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.6.1,4.A.6.1.2	-	-	EIID-AGA
PHALIAPI_02549	224308.BSU27050	1.01e-166	469.0	COG3715@1|root,COG3715@2|Bacteria,1TPKK@1239|Firmicutes,4H9QI@91061|Bacilli,1ZE3U@1386|Bacillus	91061|Bacilli	G	COG3715 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IIC	levF	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034219,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944	-	ko:K02746,ko:K02795,ko:K11196	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	M00276,M00277,M00304	R02630,R03232,R08366	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.6.1,4.A.6.1.2,4.A.6.1.4	-	-	EII-Sor
PHALIAPI_02550	224308.BSU27060	7.63e-107	308.0	COG3444@1|root,COG3444@2|Bacteria,1TQJ4@1239|Firmicutes,4H9Z8@91061|Bacilli,1ZDQ9@1386|Bacillus	91061|Bacilli	G	PTS system mannose fructose sorbose family	ptnA	-	2.7.1.191,2.7.1.202	ko:K02793,ko:K02794,ko:K11195	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	M00276,M00304	R02630,R03232	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.6.1,4.A.6.1.2	-	-	EIIA-man,PTSIIB_sorb
PHALIAPI_02551	224308.BSU27070	2.66e-97	283.0	COG2893@1|root,COG2893@2|Bacteria,1VB2D@1239|Firmicutes,4HMGK@91061|Bacilli,1ZN60@1386|Bacillus	91061|Bacilli	G	PTS system fructose IIA component	levD	-	2.7.1.191,2.7.1.202	ko:K02793,ko:K02794,ko:K11194	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	M00276,M00304	R02630,R03232	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.6.1,4.A.6.1.2	-	-	EIIA-man
PHALIAPI_02552	224308.BSU27080	0.0	1791.0	COG1221@1|root,COG3933@1|root,COG1221@2|Bacteria,COG3933@2|Bacteria,1VSHE@1239|Firmicutes,4HB6T@91061|Bacilli,1ZCV2@1386|Bacillus	91061|Bacilli	K	PTS system fructose IIA component	levR	-	-	-	-	-	-	-	-	-	-	-	EIIA-man,PRD,Sigma54_activat
PHALIAPI_02553	224308.BSU27090	0.0	875.0	COG1113@1|root,COG1113@2|Bacteria,1TP97@1239|Firmicutes,4H9QX@91061|Bacilli,1ZAQB@1386|Bacillus	91061|Bacilli	E	COG1113 Gamma-aminobutyrate permease and related permeases	aapA	-	-	ko:K03293,ko:K11737	-	-	-	-	ko00000,ko02000	2.A.3.1,2.A.3.1.7	-	-	AA_permease
PHALIAPI_02554	224308.BSU27100	7.67e-135	383.0	COG1280@1|root,COG1280@2|Bacteria,1V22Q@1239|Firmicutes,4HGG7@91061|Bacilli,1ZFWG@1386|Bacillus	91061|Bacilli	E	LysE type translocator	yrhP	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	-	-	-	-	-	-	-	-	-	LysE
PHALIAPI_02555	224308.BSU27110	2.31e-191	531.0	COG1378@1|root,COG1378@2|Bacteria,1TSY3@1239|Firmicutes,4HPSV@91061|Bacilli,1ZR3N@1386|Bacillus	91061|Bacilli	K	Archaeal transcriptional regulator TrmB	yrhO	-	-	-	-	-	-	-	-	-	-	-	Regulator_TrmB,TrmB
PHALIAPI_02556	224308.BSU27120	9.97e-114	326.0	COG1595@1|root,COG1595@2|Bacteria,1V734@1239|Firmicutes,4HJX8@91061|Bacilli,1ZGIA@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	sigV	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
PHALIAPI_02557	224308.BSU27130	2.47e-191	532.0	2DBFK@1|root,2Z8Z7@2|Bacteria,1TQKG@1239|Firmicutes,4HDJX@91061|Bacilli,1ZDFG@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3298)	rsiV	-	-	-	-	-	-	-	-	-	-	-	DUF3298,DUF4163,DUF4179
PHALIAPI_02558	224308.BSU27140	0.0	1216.0	COG1835@1|root,COG2755@1|root,COG1835@2|Bacteria,COG2755@2|Bacteria,1TPTG@1239|Firmicutes,4HB7R@91061|Bacilli,1ZB6R@1386|Bacillus	91061|Bacilli	I	Acyltransferase family	oatA	GO:0000271,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016020,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
PHALIAPI_02559	224308.BSU27150	2.58e-58	181.0	2E53A@1|root,32ZWE@2|Bacteria,1UPW8@1239|Firmicutes,4HNZR@91061|Bacilli,1ZSKD@1386|Bacillus	91061|Bacilli	S	YrhK-like protein	yrhK	-	-	-	-	-	-	-	-	-	-	-	YrhK
PHALIAPI_02560	224308.BSU27160	0.0	2069.0	COG0369@1|root,COG2124@1|root,COG0369@2|Bacteria,COG2124@2|Bacteria,1TS1E@1239|Firmicutes,4HCWS@91061|Bacilli,1ZQAP@1386|Bacillus	91061|Bacilli	C	Belongs to the cytochrome P450 family	yrhJ	GO:0000166,GO:0003674,GO:0003824,GO:0003958,GO:0004497,GO:0005488,GO:0005504,GO:0005506,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008289,GO:0009987,GO:0010181,GO:0016491,GO:0016651,GO:0016653,GO:0016705,GO:0016712,GO:0019395,GO:0019752,GO:0020037,GO:0030258,GO:0031406,GO:0032553,GO:0032787,GO:0033293,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363	1.14.14.1,1.6.2.4	ko:K14338	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	-	R03629,R04121,R05259	RC00046,RC01311	ko00000,ko00001,ko00199,ko01000	-	-	-	FAD_binding_1,Flavodoxin_1,NAD_binding_1,p450
PHALIAPI_02561	224308.BSU27170	4.57e-135	382.0	COG1309@1|root,COG1309@2|Bacteria,1VHP8@1239|Firmicutes,4IPYC@91061|Bacilli,1ZREU@1386|Bacillus	91061|Bacilli	K	Tetracycline repressor, C-terminal all-alpha domain	-	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	ko:K22106	-	-	-	-	ko00000,ko03000	-	-	-	TetR_C_10,TetR_N
PHALIAPI_02562	224308.BSU27180	2.49e-123	352.0	COG0500@1|root,COG2226@2|Bacteria	2|Bacteria	Q	methyltransferase	yrhH	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
PHALIAPI_02563	1178537.BA1_10431	1.33e-07	49.3	29T4S@1|root,30EBG@2|Bacteria,1UCCN@1239|Firmicutes,4INV1@91061|Bacilli,1ZNZI@1386|Bacillus	91061|Bacilli	S	Probable sporulation protein (Bac_small_yrzI)	-	-	-	-	-	-	-	-	-	-	-	-	Bac_small_YrzI
PHALIAPI_02565	224308.BSU27200	1.38e-183	511.0	COG2116@1|root,COG2116@2|Bacteria,1TRTT@1239|Firmicutes,4HB22@91061|Bacilli,1ZC1K@1386|Bacillus	91061|Bacilli	P	Formate nitrite	yrhG	GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015318,GO:0015499,GO:0015711,GO:0015718,GO:0015724,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K21993	-	-	-	-	ko00000,ko02000	1.A.16.2	-	-	Form_Nir_trans
PHALIAPI_02566	224308.BSU27210	4.41e-80	238.0	COG5609@1|root,COG5609@2|Bacteria,1V8MU@1239|Firmicutes,4HIS7@91061|Bacilli,1ZHGK@1386|Bacillus	91061|Bacilli	S	Uncharacterized conserved protein (DUF2294)	yrhF	-	-	-	-	-	-	-	-	-	-	-	DUF2294
PHALIAPI_02567	224308.BSU27220	0.0	1970.0	COG3383@1|root,COG3383@2|Bacteria,1TT6D@1239|Firmicutes,4IS5E@91061|Bacilli,1ZS18@1386|Bacillus	91061|Bacilli	C	formate dehydrogenase (NAD+) activity	yjgC	GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0048037,GO:0051536,GO:0051540,GO:0055114	1.17.1.9	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	Fer2_4,Fer4,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3
PHALIAPI_02568	224308.BSU27230	1.73e-102	297.0	COG2427@1|root,COG2427@2|Bacteria,1V6Z7@1239|Firmicutes,4HIG1@91061|Bacilli,1ZHM2@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1641)	yrhD	-	-	-	-	-	-	-	-	-	-	-	DUF1641
PHALIAPI_02569	224308.BSU27240	1.99e-48	154.0	2E8M6@1|root,332YN@2|Bacteria,1VFSW@1239|Firmicutes,4HNHX@91061|Bacilli,1ZIGK@1386|Bacillus	91061|Bacilli	S	YrhC-like protein	yrhC	-	-	-	-	-	-	-	-	-	-	-	YrhC
PHALIAPI_02570	224308.BSU27250	8.19e-267	731.0	COG0626@1|root,COG0626@2|Bacteria,1TPC7@1239|Firmicutes,4HAFQ@91061|Bacilli,1ZAR9@1386|Bacillus	91061|Bacilli	E	cystathionine	mccB	GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0042127,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048518,GO:0048522,GO:0050667,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	4.4.1.1,4.4.1.2,4.4.1.8	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017,M00609	R00782,R01001,R01283,R01286,R02408,R04941	RC00056,RC00069,RC00348,RC00382,RC00487,RC00488,RC00710,RC01245,RC02303,RC02814	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU27250	Cys_Met_Meta_PP
PHALIAPI_02571	224308.BSU27260	2.36e-216	597.0	COG0031@1|root,COG0031@2|Bacteria,1TP30@1239|Firmicutes,4HAMU@91061|Bacilli,1ZD93@1386|Bacillus	91061|Bacilli	E	Cysteine synthase	mccA	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004122,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016835,GO:0016836,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042127,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0065007,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.5.1.134,2.5.1.47	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021,M00609	R00897,R03601,R04859,R10305	RC00020,RC00069,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS02385	PALP
PHALIAPI_02572	224308.BSU27270	1.97e-161	452.0	COG0775@1|root,COG0775@2|Bacteria,1U7WK@1239|Firmicutes,4HB8K@91061|Bacilli,1ZB7T@1386|Bacillus	91061|Bacilli	E	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively	mtnN	-	3.2.2.9	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	M00034,M00609	R00194,R01401	RC00063,RC00318	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_UDP_1
PHALIAPI_02573	224308.BSU27280	2.42e-153	430.0	COG0500@1|root,COG2226@2|Bacteria,1V3T6@1239|Firmicutes,4HHF1@91061|Bacilli,1ZFN7@1386|Bacillus	91061|Bacilli	Q	Could be a S-adenosyl-L-methionine-dependent methyltransferase	yrrT	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464	-	ko:K17462	ko00270,ko01100,ko01230,map00270,map01100,map01230	M00609	R10404	RC00003	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25
PHALIAPI_02574	224308.BSU27290	4.94e-36	122.0	2E6WR@1|root,331G7@2|Bacteria,1VHCS@1239|Firmicutes,4HQVN@91061|Bacilli,1ZIT5@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2536)	yrzA	-	-	-	-	-	-	-	-	-	-	-	DUF2536
PHALIAPI_02575	224308.BSU27300	2.87e-102	303.0	2BJ57@1|root,32DEE@2|Bacteria,1V93H@1239|Firmicutes,4HN71@91061|Bacilli,1ZH00@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1510)	yrrS	-	-	-	-	-	-	-	-	-	-	-	DUF1510
PHALIAPI_02576	224308.BSU27310	0.0	1131.0	COG0768@1|root,COG0768@2|Bacteria,1TQKI@1239|Firmicutes,4HC5S@91061|Bacilli,1ZBDB@1386|Bacillus	91061|Bacilli	M	Penicillin-binding Protein	pbpI	-	-	ko:K21468	-	-	-	-	ko00000,ko01011	-	-	-	PBP_dimer,Transpeptidase
PHALIAPI_02577	224308.BSU27320	1.14e-101	295.0	COG0782@1|root,COG0782@2|Bacteria,1V44S@1239|Firmicutes,4HGZU@91061|Bacilli,1ZFQI@1386|Bacillus	91061|Bacilli	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides	greA	GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576	-	ko:K03624	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
PHALIAPI_02578	224308.BSU27330	4.51e-148	417.0	COG0572@1|root,COG0572@2|Bacteria,1TQ4V@1239|Firmicutes,4HAVR@91061|Bacilli,1ZB2B@1386|Bacillus	91061|Bacilli	F	Cytidine monophosphokinase	udk	GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.7.1.48	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PRK
PHALIAPI_02579	224308.BSU27340	2.67e-312	850.0	COG0826@1|root,COG0826@2|Bacteria,1TPRE@1239|Firmicutes,4HBEG@91061|Bacilli,1ZC7K@1386|Bacillus	91061|Bacilli	O	COG0826 Collagenase and related proteases	yrrO	-	-	ko:K08303	ko05120,map05120	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_U32,Peptidase_U32_C
PHALIAPI_02580	224308.BSU27350	2.46e-219	605.0	COG0826@1|root,COG0826@2|Bacteria,1TQIZ@1239|Firmicutes,4HA2T@91061|Bacilli,1ZAXB@1386|Bacillus	91061|Bacilli	O	Peptidase U32	yrrN	-	-	ko:K08303	ko05120,map05120	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_U32
PHALIAPI_02581	224308.BSU27360	1.98e-154	433.0	COG4122@1|root,COG4122@2|Bacteria,1UF4M@1239|Firmicutes,4HE9E@91061|Bacilli,1ZFK8@1386|Bacillus	91061|Bacilli	S	O-methyltransferase	yrrM	-	2.1.1.104	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	M00039,M00350	R01942,R06578	RC00003,RC00392	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_3
PHALIAPI_02582	224308.BSU27370	8.76e-241	664.0	COG1559@1|root,COG1559@2|Bacteria,1TS48@1239|Firmicutes,4HAUV@91061|Bacilli,1ZC44@1386|Bacillus	91061|Bacilli	S	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation	mltG	-	-	ko:K07082	-	-	-	-	ko00000	-	-	-	YceG
PHALIAPI_02583	224308.BSU27380	2.94e-60	185.0	COG3906@1|root,COG3906@2|Bacteria,1VAPW@1239|Firmicutes,4HKV7@91061|Bacilli,1ZI20@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0473 family	yrzB	-	-	-	-	-	-	-	-	-	-	-	DUF1292
PHALIAPI_02584	224308.BSU27390	5.49e-93	271.0	COG0816@1|root,COG0816@2|Bacteria,1V6ER@1239|Firmicutes,4HH04@91061|Bacilli,1ZG6Y@1386|Bacillus	91061|Bacilli	L	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA	yrrK	GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	-	ko:K07447	-	-	-	-	ko00000,ko01000	-	-	-	RuvX
PHALIAPI_02585	224308.BSU27400	2.22e-55	172.0	COG4472@1|root,COG4472@2|Bacteria,1VAC4@1239|Firmicutes,4HKD0@91061|Bacilli,1ZHU7@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0297 family	yrzL	-	-	-	-	-	-	-	-	-	-	-	DUF965
PHALIAPI_02586	224308.BSU27410	0.0	1716.0	COG0013@1|root,COG0013@2|Bacteria,1TPK6@1239|Firmicutes,4H9XC@91061|Bacilli,1ZB9E@1386|Bacillus	91061|Bacilli	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
PHALIAPI_02587	224308.BSU27420	7.23e-241	663.0	COG0628@1|root,COG0628@2|Bacteria,1TQ84@1239|Firmicutes,4H9SR@91061|Bacilli,1ZBGE@1386|Bacillus	91061|Bacilli	S	AI-2E family transporter	yrrI	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
PHALIAPI_02588	224308.BSU27430	8.99e-168	469.0	COG1126@1|root,COG1126@2|Bacteria,1TNYD@1239|Firmicutes,4H9WY@91061|Bacilli,1ZB2E@1386|Bacillus	91061|Bacilli	E	COG1126 ABC-type polar amino acid transport system, ATPase component	glnQ	-	-	ko:K09972,ko:K10041	ko02010,map02010	M00228,M00232	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3,3.A.1.3.17,3.A.1.3.18,3.A.1.3.7,3.A.1.3.8	-	-	ABC_tran
PHALIAPI_02589	224308.BSU27440	2.12e-186	519.0	COG0834@1|root,COG0834@2|Bacteria,1TT11@1239|Firmicutes,4HAHV@91061|Bacilli,1ZCGF@1386|Bacillus	91061|Bacilli	ET	Belongs to the bacterial solute-binding protein 3 family	glnH	-	-	ko:K09969,ko:K10039	ko02010,map02010	M00228,M00232	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.18,3.A.1.3.7,3.A.1.3.8	-	-	SBP_bac_3
PHALIAPI_02590	224308.BSU27450	6.53e-139	394.0	COG0765@1|root,COG0765@2|Bacteria,1TQ5K@1239|Firmicutes,4HFBH@91061|Bacilli,1ZCEF@1386|Bacillus	91061|Bacilli	P	ABC transporter	glnM	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K10040	ko02010,map02010	M00228	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3	-	-	BPD_transp_1
PHALIAPI_02591	224308.BSU27460	9.26e-140	396.0	COG0765@1|root,COG0765@2|Bacteria,1UJM4@1239|Firmicutes,4HBAS@91061|Bacilli,1ZCE8@1386|Bacillus	91061|Bacilli	P	ABC transporter	glnP	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K10040	ko02010,map02010	M00228	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3	-	-	BPD_transp_1
PHALIAPI_02592	279010.BL05285	5.38e-12	60.1	2BGYN@1|root,32AYR@2|Bacteria,1UB24@1239|Firmicutes,4IMF0@91061|Bacilli,1ZJZY@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3918)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3918
PHALIAPI_02593	224308.BSU27469	8.4e-42	136.0	2E4YS@1|root,32ZSJ@2|Bacteria,1VEX3@1239|Firmicutes,4HNZ8@91061|Bacilli,1ZIT3@1386|Bacillus	91061|Bacilli	-	-	yrzR	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02594	224308.BSU27470	1.14e-104	303.0	COG3881@1|root,COG3881@2|Bacteria,1VEG9@1239|Firmicutes,4HPBU@91061|Bacilli,1ZH8E@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yrrD	-	-	-	-	-	-	-	-	-	-	-	PRC
PHALIAPI_02595	224308.BSU27480	0.0	1568.0	COG0507@1|root,COG0507@2|Bacteria,1TPZH@1239|Firmicutes,4HATQ@91061|Bacilli,1ZAYS@1386|Bacillus	91061|Bacilli	L	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity	recD2	-	3.1.11.5	ko:K03581	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AAA_30,HHH_4,HHH_5,UvrD_C_2
PHALIAPI_02596	1051501.AYTL01000030_gene2822	1.01e-20	93.6	COG0457@1|root,COG0457@2|Bacteria,1V1HX@1239|Firmicutes,4HG5V@91061|Bacilli,1ZCPW@1386|Bacillus	91061|Bacilli	S	COG0457 FOG TPR repeat	yrrB	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_16,TPR_2,TPR_6,TPR_8
PHALIAPI_02597	224308.BSU27500	4.83e-280	764.0	COG0482@1|root,COG0482@2|Bacteria,1TPIZ@1239|Firmicutes,4HBJ6@91061|Bacilli,1ZBWQ@1386|Bacillus	91061|Bacilli	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	mnmA	GO:0002097,GO:0002098,GO:0002143,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	2.8.1.13	ko:K00566	ko04122,map04122	-	R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016	-	-	-	tRNA_Me_trans
PHALIAPI_02598	224308.BSU27510	7.63e-270	739.0	COG1104@1|root,COG1104@2|Bacteria,1TP21@1239|Firmicutes,4HA6H@91061|Bacilli,1ZB1B@1386|Bacillus	91061|Bacilli	E	Cysteine desulfurase	iscS	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
PHALIAPI_02599	224308.BSU27520	8.12e-93	271.0	COG1959@1|root,COG1959@2|Bacteria,1V3QB@1239|Firmicutes,4HHCF@91061|Bacilli,1ZFKT@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	cymR	GO:0001047,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0032991,GO:0032993,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044212,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051291,GO:0065003,GO:0071840,GO:0097159,GO:1901363	-	ko:K17472	-	-	-	-	ko00000,ko03000	-	-	-	Rrf2
PHALIAPI_02600	224308.BSU27530	9.91e-303	825.0	COG2256@1|root,COG2256@2|Bacteria,1TPVV@1239|Firmicutes,4HAIS@91061|Bacilli,1ZBCW@1386|Bacillus	91061|Bacilli	L	COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase	rarA	-	-	ko:K07478	-	-	-	-	ko00000	-	-	-	AAA,AAA_assoc_2,MgsA_C,RuvB_N
PHALIAPI_02601	224308.BSU27540	3.8e-175	489.0	COG1179@1|root,COG1179@2|Bacteria,1TQ7A@1239|Firmicutes,4H9KZ@91061|Bacilli,1ZBGG@1386|Bacillus	91061|Bacilli	H	COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1	yrvM	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016829,GO:0016835,GO:0016836,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0061503,GO:0061504,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	-	ko:K22132	-	-	-	-	ko00000,ko03016	-	-	-	ThiF
PHALIAPI_02602	224308.BSU27550	0.0	1162.0	COG0173@1|root,COG0173@2|Bacteria,1TPCN@1239|Firmicutes,4HACD@91061|Bacilli,1ZBXI@1386|Bacillus	91061|Bacilli	J	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)	aspS	-	6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	GAD,tRNA-synt_2,tRNA_anti-codon
PHALIAPI_02603	224308.BSU27560	1e-308	841.0	COG0124@1|root,COG0124@2|Bacteria,1TP3D@1239|Firmicutes,4HAM2@91061|Bacilli,1ZBXR@1386|Bacillus	91061|Bacilli	J	histidyl-tRNA synthetase	hisS	-	6.1.1.21	ko:K01892	ko00970,map00970	M00359,M00360	R03655	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_2b,tRNA-synt_His
PHALIAPI_02605	224308.BSU27580	0.0	937.0	COG0860@1|root,COG3103@1|root,COG0860@2|Bacteria,COG3103@2|Bacteria,COG4991@2|Bacteria,1UYPW@1239|Firmicutes,4HBVT@91061|Bacilli,1ZDI1@1386|Bacillus	91061|Bacilli	M	COG3103 SH3 domain protein	lytH	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3,SH3_3
PHALIAPI_02606	1051501.AYTL01000030_gene2832	3.91e-90	265.0	COG1490@1|root,COG1490@2|Bacteria,1V6GH@1239|Firmicutes,4HINN@91061|Bacilli,1ZG82@1386|Bacillus	91061|Bacilli	J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality	dtd	GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360	-	ko:K07560	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Tyr_Deacylase
PHALIAPI_02607	224308.BSU27600	0.0	1427.0	COG0317@1|root,COG0317@2|Bacteria,1TNYZ@1239|Firmicutes,4HBX7@91061|Bacilli,1ZBN6@1386|Bacillus	91061|Bacilli	KT	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	relA	GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657	2.7.6.5	ko:K00951	ko00230,map00230	-	R00429	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	iYO844.BSU27600	ACT_4,HD_4,RelA_SpoT,TGS
PHALIAPI_02608	224308.BSU27610	1.46e-117	336.0	COG0503@1|root,COG0503@2|Bacteria,1V1BV@1239|Firmicutes,4HFUA@91061|Bacilli,1ZD01@1386|Bacillus	91061|Bacilli	F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	apt	GO:0003674,GO:0003824,GO:0003999,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.4.2.7	ko:K00759	ko00230,ko01100,map00230,map01100	-	R00190,R01229,R04378	RC00063	ko00000,ko00001,ko01000,ko04147	-	-	-	Pribosyltran
PHALIAPI_02609	224308.BSU27620	0.0	1532.0	COG0608@1|root,COG4199@1|root,COG0608@2|Bacteria,COG4199@2|Bacteria,1TPXE@1239|Firmicutes,4H9UP@91061|Bacilli,1ZBAT@1386|Bacillus	91061|Bacilli	L	Single-stranded-DNA-specific exonuclease RecJ	recJ	-	-	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1,ssDNA-exonuc_C
PHALIAPI_02610	224308.BSU27630	8.79e-64	195.0	COG5416@1|root,COG5416@2|Bacteria,1VGMG@1239|Firmicutes,4HQ29@91061|Bacilli,1ZIY0@1386|Bacillus	91061|Bacilli	S	Lipopolysaccharide assembly protein A domain	yrvD	-	-	-	-	-	-	-	-	-	-	-	LapA_dom
PHALIAPI_02611	224308.BSU27640	3.77e-113	325.0	COG0490@1|root,COG0490@2|Bacteria,1V544@1239|Firmicutes,4HI3A@91061|Bacilli,1ZGIQ@1386|Bacillus	91061|Bacilli	P	regulatory, ligand-binding protein related to C-terminal domains of K channels	trkA1	-	-	ko:K07228	-	-	-	-	ko00000	-	-	-	TrkA_C
PHALIAPI_02612	224308.BSU27650	0.0	1371.0	COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,1TQVT@1239|Firmicutes,4HB6K@91061|Bacilli,1ZBS9@1386|Bacillus	91061|Bacilli	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secD	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944	-	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
PHALIAPI_02613	224308.BSU27660	5.53e-65	197.0	2E6NG@1|root,3318Y@2|Bacteria,1VHES@1239|Firmicutes,4HP4D@91061|Bacilli,1ZJ02@1386|Bacillus	91061|Bacilli	S	Post-transcriptional regulator	yrzD	-	-	-	-	-	-	-	-	-	-	-	Post_transc_reg
PHALIAPI_02614	224308.BSU27670	0.0	926.0	COG2244@1|root,COG2244@2|Bacteria,1TNYX@1239|Firmicutes,4HAB7@91061|Bacilli,1ZDHC@1386|Bacillus	91061|Bacilli	S	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid	spoVB	-	-	ko:K06409	-	-	-	-	ko00000,ko02000	2.A.66.2.14	-	-	Polysacc_synt,Polysacc_synt_C
PHALIAPI_02615	224308.BSU27680	5.83e-143	404.0	COG2323@1|root,COG2323@2|Bacteria,1V3NW@1239|Firmicutes,4HHEY@91061|Bacilli,1ZDIR@1386|Bacillus	91061|Bacilli	S	membrane	yrbG	-	-	-	-	-	-	-	-	-	-	-	DUF421
PHALIAPI_02616	224308.BSU27690	5.95e-96	280.0	2E8Q1@1|root,33314@2|Bacteria,1VFPE@1239|Firmicutes,4HPJ2@91061|Bacilli,1ZHSS@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3792)	yrzE	-	-	-	-	-	-	-	-	-	-	-	DUF3792
PHALIAPI_02617	224308.BSU27700	1.29e-52	166.0	COG1862@1|root,COG1862@2|Bacteria,1VEMC@1239|Firmicutes,4HNK0@91061|Bacilli,1ZHST@1386|Bacillus	91061|Bacilli	U	Preprotein translocase subunit YajC	yajC	-	-	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	YajC
PHALIAPI_02618	224308.BSU27710	4.74e-292	795.0	COG0343@1|root,COG0343@2|Bacteria,1TNZ4@1239|Firmicutes,4HCNM@91061|Bacilli,1ZBFJ@1386|Bacillus	91061|Bacilli	F	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)	tgt	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	TGT
PHALIAPI_02619	224308.BSU27720	2.46e-247	679.0	COG0809@1|root,COG0809@2|Bacteria,1TPKD@1239|Firmicutes,4H9PT@91061|Bacilli,1ZB71@1386|Bacillus	91061|Bacilli	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
PHALIAPI_02620	1051501.AYTL01000030_gene2846	4.84e-29	104.0	2DNS1@1|root,32YVX@2|Bacteria,1VEGC@1239|Firmicutes,4HPC6@91061|Bacilli,1ZJ6M@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2905)	yrzS	-	-	-	-	-	-	-	-	-	-	-	DUF2905
PHALIAPI_02621	224308.BSU27730	9.14e-239	656.0	COG2255@1|root,COG2255@2|Bacteria,1TR47@1239|Firmicutes,4HBMW@91061|Bacilli,1ZC5A@1386|Bacillus	91061|Bacilli	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing	ruvB	-	3.6.4.12	ko:K03551	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvB_C,RuvB_N
PHALIAPI_02622	224308.BSU27740	2.84e-137	389.0	COG0632@1|root,COG0632@2|Bacteria,1V3KF@1239|Firmicutes,4HHI5@91061|Bacilli,1ZBJT@1386|Bacillus	91061|Bacilli	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	ruvA	-	3.6.4.12	ko:K03550	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HHH_5,RuvA_C,RuvA_N
PHALIAPI_02623	224308.BSU27750	6.46e-121	345.0	2DGQY@1|root,32U7R@2|Bacteria,1V83A@1239|Firmicutes,4HKRI@91061|Bacilli,1ZH9Y@1386|Bacillus	91061|Bacilli	S	BofC C-terminal domain	bofC	-	-	ko:K06318	-	-	-	-	ko00000	-	-	-	BOFC_N,BofC_C
PHALIAPI_02624	224308.BSU27760	0.0	880.0	COG0477@1|root,COG2814@2|Bacteria,1TRNB@1239|Firmicutes,4HCAI@91061|Bacilli,1ZCJH@1386|Bacillus	91061|Bacilli	EGP	the major facilitator superfamily	csbX	-	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_02625	224308.BSU27770	2.65e-246	676.0	COG0673@1|root,COG0673@2|Bacteria,1TP83@1239|Firmicutes,4HAKY@91061|Bacilli,1ZBDM@1386|Bacillus	91061|Bacilli	S	Oxidoreductase family, NAD-binding Rossmann fold	idhA	-	1.1.1.18,1.1.1.369	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	-	R01183,R09951	RC00182	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
PHALIAPI_02626	224308.BSU27785	6.39e-150	422.0	COG2112@1|root,COG2112@2|Bacteria,1UIYE@1239|Firmicutes,4ISX4@91061|Bacilli,1ZF0H@1386|Bacillus	91061|Bacilli	T	serine threonine protein kinase	yrzF	-	-	-	-	-	-	-	-	-	-	-	Pkinase
PHALIAPI_02628	1051501.AYTL01000030_gene2853	4.41e-68	208.0	2CJYE@1|root,32SB3@2|Bacteria,1VAGT@1239|Firmicutes,4HRVP@91061|Bacilli,1ZH9N@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5412)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5412
PHALIAPI_02629	224308.BSU27810	0.0	910.0	COG1115@1|root,COG1115@2|Bacteria,1TNZP@1239|Firmicutes,4H9SZ@91061|Bacilli,1ZAX7@1386|Bacillus	91061|Bacilli	E	Sodium alanine symporter	yrbD	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03310	-	-	-	-	ko00000	2.A.25	-	-	Na_Ala_symp
PHALIAPI_02630	224308.BSU27820	8.27e-163	456.0	COG0217@1|root,COG0217@2|Bacteria,1TPP5@1239|Firmicutes,4H9WJ@91061|Bacilli,1ZBN0@1386|Bacillus	91061|Bacilli	K	transcriptional regulatory protein	yebC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Transcrip_reg
PHALIAPI_02631	720555.BATR1942_11680	7.28e-70	218.0	2C7CE@1|root,30872@2|Bacteria,1V67M@1239|Firmicutes,4HHGE@91061|Bacilli,1ZDZH@1386|Bacillus	91061|Bacilli	S	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)	-	-	-	ko:K06345	-	-	-	-	ko00000	-	-	-	Spore_YhcN_YlaJ
PHALIAPI_02632	224308.BSU27840	5.02e-214	598.0	COG1388@1|root,COG1388@2|Bacteria,1VETU@1239|Firmicutes,4HP2D@91061|Bacilli,1ZD0H@1386|Bacillus	91061|Bacilli	M	spore coat assembly protein SafA	safA	GO:0003674,GO:0005488,GO:0005515,GO:0019899,GO:0051117	-	ko:K06370	-	-	-	-	ko00000	-	-	-	LysM
PHALIAPI_02633	224308.BSU27850	1.32e-271	742.0	COG0379@1|root,COG0379@2|Bacteria,1TP6R@1239|Firmicutes,4H9QG@91061|Bacilli,1ZAR3@1386|Bacillus	91061|Bacilli	H	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate	nadA	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	2.5.1.72	ko:K03517	ko00760,ko01100,map00760,map01100	M00115	R04292	RC01119	ko00000,ko00001,ko00002,ko01000	-	-	-	NadA
PHALIAPI_02634	224308.BSU27860	9.4e-198	549.0	COG0157@1|root,COG0157@2|Bacteria,1TPQC@1239|Firmicutes,4HB46@91061|Bacilli,1ZBVN@1386|Bacillus	91061|Bacilli	H	Belongs to the NadC ModD family	nadC	GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576	2.4.2.19	ko:K00767	ko00760,ko01100,map00760,map01100	M00115	R03348	RC02877	ko00000,ko00001,ko00002,ko01000	-	-	-	QRPTase_C,QRPTase_N
PHALIAPI_02635	224308.BSU27870	0.0	1030.0	COG0029@1|root,COG0029@2|Bacteria,1UHSP@1239|Firmicutes,4H9ZZ@91061|Bacilli,1ZBIE@1386|Bacillus	91061|Bacilli	H	Catalyzes the oxidation of L-aspartate to iminoaspartate	nadB	-	1.4.3.16	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	M00115	R00357,R00481	RC00006,RC02566	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
PHALIAPI_02636	224308.BSU27880	9.61e-290	790.0	COG1104@1|root,COG1104@2|Bacteria,1TPYU@1239|Firmicutes,4HA5J@91061|Bacilli,1ZCRY@1386|Bacillus	91061|Bacilli	E	Cysteine desulfurase	nifS	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
PHALIAPI_02637	224308.BSU27890	1.44e-122	350.0	COG1827@1|root,COG1827@2|Bacteria,1V6EY@1239|Firmicutes,4HGYB@91061|Bacilli,1ZGFK@1386|Bacillus	91061|Bacilli	S	small molecule binding protein (contains 3H domain)	yrxA	-	-	ko:K07105	-	-	-	-	ko00000	-	-	-	3H,HTH_11
PHALIAPI_02638	224308.BSU27900	1.43e-208	576.0	COG0077@1|root,COG0077@2|Bacteria,1TPDN@1239|Firmicutes,4HA96@91061|Bacilli,1ZAVW@1386|Bacillus	91061|Bacilli	E	Prephenate dehydratase	pheA	GO:0003674,GO:0003824,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223	4.2.1.51	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024	R00691,R01373	RC00360	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU27900	ACT,PDT
PHALIAPI_02639	224308.BSU27910	4.75e-96	280.0	COG4492@1|root,COG4492@2|Bacteria,1VAJ9@1239|Firmicutes,4HFRC@91061|Bacilli,1ZFNK@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0735 family	pheB	-	5.4.99.5	ko:K06209	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024,M00025	R01715	RC03116	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU27910	ACT,ACT_4
PHALIAPI_02640	224308.BSU27920	5.59e-308	839.0	COG0536@1|root,COG0536@2|Bacteria,1TPX7@1239|Firmicutes,4H9P8@91061|Bacilli,1ZCM4@1386|Bacillus	91061|Bacilli	S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control	obg	GO:0000003,GO:0000160,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0017076,GO:0019001,GO:0019954,GO:0023052,GO:0030436,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035556,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043934,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0097159,GO:0097367,GO:1901265,GO:1901363	-	ko:K03979	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	DUF1967,GTP1_OBG,MMR_HSR1
PHALIAPI_02641	224308.BSU27930	1.73e-136	386.0	COG3290@1|root,COG3290@2|Bacteria,1V8IS@1239|Firmicutes,4HQ4T@91061|Bacilli,1ZHUN@1386|Bacillus	91061|Bacilli	T	Sporulation initiation phospho-transferase B, C-terminal	spo0B	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K06375	ko02020,ko02024,map02020,map02024	-	-	-	ko00000,ko00001,ko01000	-	-	-	SPOB_a,SPOB_ab
PHALIAPI_02642	1051501.AYTL01000030_gene2867	2.7e-61	188.0	COG0211@1|root,COG0211@2|Bacteria,1V6HW@1239|Firmicutes,4HIMN@91061|Bacilli,1ZGZ9@1386|Bacillus	91061|Bacilli	J	Belongs to the bacterial ribosomal protein bL27 family	rpmA	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02899	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27
PHALIAPI_02643	224308.BSU27950	2.66e-74	222.0	COG2868@1|root,COG2868@2|Bacteria,1VEQ9@1239|Firmicutes,4HNMV@91061|Bacilli,1ZI1F@1386|Bacillus	91061|Bacilli	J	ribosomal protein	ysxB	-	-	ko:K07584	-	-	-	-	ko00000	-	-	-	Peptidase_Prp
PHALIAPI_02644	224308.BSU27960	6.34e-66	200.0	COG0261@1|root,COG0261@2|Bacteria,1V9YH@1239|Firmicutes,4HIGK@91061|Bacilli,1ZGZG@1386|Bacillus	91061|Bacilli	J	This protein binds to 23S rRNA in the presence of protein L20	rplU	GO:0003674,GO:0003735,GO:0005198	-	ko:K02888	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L21p
PHALIAPI_02645	224308.BSU27970	1.25e-206	571.0	COG1994@1|root,COG1994@2|Bacteria,1V72P@1239|Firmicutes,4IR6Y@91061|Bacilli,1ZAQ2@1386|Bacillus	91061|Bacilli	S	Stage IV sporulation protein	spoIVFB	-	-	ko:K06402	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M50,Peptidase_M50B
PHALIAPI_02646	224308.BSU27980	1.83e-187	521.0	COG0739@1|root,COG0739@2|Bacteria,1TSQI@1239|Firmicutes,4HFC8@91061|Bacilli,1ZFJN@1386|Bacillus	91061|Bacilli	M	COG0739 Membrane proteins related to metalloendopeptidases	spoIVFA	-	-	ko:K06401	-	-	-	-	ko00000	-	-	-	Peptidase_M23
PHALIAPI_02647	224308.BSU27990	2.91e-186	518.0	COG2894@1|root,COG2894@2|Bacteria,1TP6P@1239|Firmicutes,4HB2F@91061|Bacilli,1ZB5P@1386|Bacillus	91061|Bacilli	D	Belongs to the ParA family	minD	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03609	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31,CbiA
PHALIAPI_02648	224308.BSU28000	4.3e-158	443.0	COG0850@1|root,COG0850@2|Bacteria,1VAPC@1239|Firmicutes,4HBTI@91061|Bacilli,1ZDSJ@1386|Bacillus	91061|Bacilli	D	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization	minC	GO:0000910,GO:0003674,GO:0004857,GO:0007049,GO:0007105,GO:0008150,GO:0009987,GO:0022402,GO:0030234,GO:0031333,GO:0032271,GO:0032272,GO:0032506,GO:0043086,GO:0043254,GO:0044087,GO:0044092,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0065007,GO:0065009,GO:0098772	-	ko:K03610	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	MinC_C
PHALIAPI_02649	224308.BSU28010	8.72e-111	319.0	COG2891@1|root,COG2891@2|Bacteria,1VEN7@1239|Firmicutes,4HNWW@91061|Bacilli,1ZGID@1386|Bacillus	91061|Bacilli	M	shape-determining protein	mreD	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03571	-	-	-	-	ko00000,ko03036	9.B.157.1	-	-	MreD
PHALIAPI_02650	224308.BSU28020	7.78e-202	559.0	COG1792@1|root,COG1792@2|Bacteria,1TR1V@1239|Firmicutes,4HB0K@91061|Bacilli,1ZC8X@1386|Bacillus	91061|Bacilli	M	Involved in formation and maintenance of cell shape	mreC	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0022603,GO:0022604,GO:0030428,GO:0042546,GO:0043621,GO:0044085,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944	-	ko:K03570	-	-	-	-	ko00000,ko03036	9.B.157.1	-	-	MreC
PHALIAPI_02651	224308.BSU28030	5.26e-235	647.0	COG1077@1|root,COG1077@2|Bacteria,1TP51@1239|Firmicutes,4HA4S@91061|Bacilli,1ZB43@1386|Bacillus	91061|Bacilli	D	Rod shape-determining protein MreB	mreB	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
PHALIAPI_02652	224308.BSU28040	3.4e-162	454.0	COG2003@1|root,COG2003@2|Bacteria,1TQ3K@1239|Firmicutes,4HB1W@91061|Bacilli,1ZBYH@1386|Bacillus	91061|Bacilli	E	Belongs to the UPF0758 family	radC	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
PHALIAPI_02653	224308.BSU28050	1.73e-132	375.0	COG0424@1|root,COG0424@2|Bacteria,1V6FH@1239|Firmicutes,4HIMK@91061|Bacilli,1ZGDP@1386|Bacillus	91061|Bacilli	D	septum formation protein Maf	maf	GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
PHALIAPI_02654	224308.BSU28060	1.66e-208	580.0	29RG0@1|root,30CIU@2|Bacteria,1U9YU@1239|Firmicutes,4IK6R@91061|Bacilli,1ZFFM@1386|Bacillus	91061|Bacilli	S	Sporulation related domain	spoIIB	-	-	ko:K06380	-	-	-	-	ko00000	-	-	-	SPOR
PHALIAPI_02655	224308.BSU28070	2.53e-161	453.0	COG1989@1|root,COG1989@2|Bacteria,1TQY4@1239|Firmicutes,4HCC3@91061|Bacilli,1ZCQ2@1386|Bacillus	91061|Bacilli	NOU	COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases	comC	-	3.4.23.43	ko:K02236,ko:K02654	-	M00331,M00429	-	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	3.A.15.2	-	-	DiS_P_DiS,Peptidase_A24
PHALIAPI_02656	224308.BSU28080	2.13e-313	853.0	COG0285@1|root,COG0285@2|Bacteria,1TPX5@1239|Firmicutes,4HBJM@91061|Bacilli,1ZAWN@1386|Bacillus	91061|Bacilli	H	Belongs to the folylpolyglutamate synthase family	folC	GO:0003674,GO:0003824,GO:0004326,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006761,GO:0006807,GO:0008150,GO:0008152,GO:0008841,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046452,GO:0046483,GO:0046900,GO:0046901,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.2.12,6.3.2.17	ko:K11754	ko00790,ko01100,map00790,map01100	M00126,M00841	R00942,R02237,R04241	RC00064,RC00090,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	Mur_ligase_C,Mur_ligase_M
PHALIAPI_02657	224308.BSU28090	0.0	1790.0	COG0525@1|root,COG0525@2|Bacteria,1TPN4@1239|Firmicutes,4HB85@91061|Bacilli,1ZAS4@1386|Bacillus	91061|Bacilli	J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner	valS	GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.9	ko:K01873	ko00970,map00970	M00359,M00360	R03665	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1
PHALIAPI_02658	224308.BSU28099	1.53e-35	120.0	2ESUV@1|root,33KD9@2|Bacteria,1VP5F@1239|Firmicutes,4HSYB@91061|Bacilli,1ZIWU@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02659	224308.BSU28100	2.39e-252	691.0	COG2334@1|root,COG2334@2|Bacteria,1V54J@1239|Firmicutes,4HH2K@91061|Bacilli,1ZB97@1386|Bacillus	91061|Bacilli	S	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response	ysxE	-	-	-	-	-	-	-	-	-	-	-	APH
PHALIAPI_02660	224308.BSU28110	0.0	973.0	COG1388@1|root,COG1388@2|Bacteria,1U052@1239|Firmicutes,4HF2C@91061|Bacilli,1ZB2H@1386|Bacillus	91061|Bacilli	M	stage VI sporulation protein D	spoVID	GO:0003674,GO:0005488,GO:0005515,GO:0019899,GO:0051117	-	ko:K06417	-	-	-	-	ko00000	-	-	-	LysM
PHALIAPI_02661	224308.BSU28120	3.53e-312	850.0	COG0001@1|root,COG0001@2|Bacteria,1TPNH@1239|Firmicutes,4HANQ@91061|Bacilli,1ZBUT@1386|Bacillus	91061|Bacilli	H	Glutamate-1-semialdehyde aminotransferase	hemL	-	5.4.3.8	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02272	RC00677	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	iSB619.SA_RS08395	Aminotran_3
PHALIAPI_02662	224308.BSU28130	3.7e-233	641.0	COG0113@1|root,COG0113@2|Bacteria,1TP09@1239|Firmicutes,4HBQC@91061|Bacilli,1ZARK@1386|Bacillus	91061|Bacilli	H	Belongs to the ALAD family	hemB	GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.2.1.24	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00036	RC00918,RC01781	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ALAD
PHALIAPI_02663	224308.BSU28140	5.02e-184	512.0	COG1587@1|root,COG1587@2|Bacteria,1UHSJ@1239|Firmicutes,4HFY4@91061|Bacilli,1ZGER@1386|Bacillus	91061|Bacilli	H	Uroporphyrinogen-III synthase	hemD	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
PHALIAPI_02664	224308.BSU28150	3.11e-220	608.0	COG0181@1|root,COG0181@2|Bacteria,1TPFQ@1239|Firmicutes,4H9TV@91061|Bacilli,1ZCR0@1386|Bacillus	91061|Bacilli	H	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps	hemC	GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.61	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00084	RC02317	ko00000,ko00001,ko00002,ko01000	-	-	-	Porphobil_deam,Porphobil_deamC
PHALIAPI_02665	224308.BSU28160	6.56e-187	520.0	COG0755@1|root,COG0755@2|Bacteria,1U8IP@1239|Firmicutes,4HD6H@91061|Bacilli,1ZBFP@1386|Bacillus	91061|Bacilli	O	cytochrome C	hemX	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008152,GO:0015886,GO:0016020,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0055114,GO:0071702,GO:0071705,GO:0071944,GO:1901678	-	ko:K02497	-	-	-	-	ko00000	-	-	-	Cytochrom_C_asm
PHALIAPI_02666	224308.BSU28170	6.39e-316	862.0	COG0373@1|root,COG0373@2|Bacteria,1TQN9@1239|Firmicutes,4HAVC@91061|Bacilli,1ZBER@1386|Bacillus	91061|Bacilli	H	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)	hemA	-	1.2.1.70	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R04109	RC00055,RC00149	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS08420	GlutR_N,GlutR_dimer,Shikimate_DH
PHALIAPI_02667	224308.BSU28180	4.77e-116	332.0	2CYGZ@1|root,32T47@2|Bacteria,1VA1R@1239|Firmicutes,4HM46@91061|Bacilli,1ZGJG@1386|Bacillus	91061|Bacilli	-	-	ysxD	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02668	224308.BSU28190	7.6e-139	392.0	COG0218@1|root,COG0218@2|Bacteria,1TSPW@1239|Firmicutes,4HBXZ@91061|Bacilli,1ZBX7@1386|Bacillus	91061|Bacilli	D	Necessary for normal cell division and for the maintenance of normal septation	engB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K03978	-	-	-	-	ko00000,ko03036	-	-	-	MMR_HSR1
PHALIAPI_02669	224308.BSU28200	0.0	1483.0	COG0466@1|root,COG0466@2|Bacteria,1TNYG@1239|Firmicutes,4HAZK@91061|Bacilli,1ZAXX@1386|Bacillus	91061|Bacilli	O	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	lon	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.4.21.53	ko:K01338	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	AAA,LON_substr_bdg,Lon_C
PHALIAPI_02670	224308.BSU28210	0.0	1073.0	COG0470@1|root,COG1067@1|root,COG0470@2|Bacteria,COG1067@2|Bacteria,1TP2K@1239|Firmicutes,4HB6F@91061|Bacilli,1ZBW1@1386|Bacillus	91061|Bacilli	LO	Belongs to the peptidase S16 family	lonB	-	3.4.21.53	ko:K04076	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	AAA,Lon_C
PHALIAPI_02671	224308.BSU28220	1.15e-296	810.0	COG1219@1|root,COG1219@2|Bacteria,1TQ00@1239|Firmicutes,4H9U4@91061|Bacilli,1ZANE@1386|Bacillus	91061|Bacilli	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP	clpX	GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575	-	ko:K03544	ko04112,map04112	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA_2,ClpB_D2-small,zf-C4_ClpX
PHALIAPI_02672	224308.BSU28230	1.47e-285	782.0	COG0544@1|root,COG0544@2|Bacteria,1TQQ8@1239|Firmicutes,4H9Q8@91061|Bacilli,1ZBRE@1386|Bacillus	91061|Bacilli	D	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase	tig	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K03545	-	-	-	-	ko00000	-	-	-	FKBP_C,Trigger_C,Trigger_N
PHALIAPI_02673	224308.BSU28240	1.11e-239	659.0	COG0457@1|root,COG1477@1|root,COG0457@2|Bacteria,COG1477@2|Bacteria,1V7T7@1239|Firmicutes,4HKAH@91061|Bacilli,1ZS6N@1386|Bacillus	91061|Bacilli	H	Tetratricopeptide repeat	ysoA	-	-	-	-	-	-	-	-	-	-	-	TPR_19
PHALIAPI_02674	224308.BSU28250	1.08e-149	420.0	COG0066@1|root,COG0066@2|Bacteria,1V1I6@1239|Firmicutes,4HH3U@91061|Bacilli,1ZQWB@1386|Bacillus	91061|Bacilli	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	leuD	-	4.2.1.33,4.2.1.35	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R10170	RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase_C
PHALIAPI_02675	224308.BSU28260	0.0	952.0	COG0065@1|root,COG0065@2|Bacteria,1TPE5@1239|Firmicutes,4HAWA@91061|Bacilli,1ZCF1@1386|Bacillus	91061|Bacilli	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	leuC	-	4.2.1.33,4.2.1.35	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170	RC00497,RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS10700	Aconitase
PHALIAPI_02676	224308.BSU28270	4.3e-255	700.0	COG0473@1|root,COG0473@2|Bacteria,1TPEM@1239|Firmicutes,4HATP@91061|Bacilli,1ZB3Y@1386|Bacillus	91061|Bacilli	CE	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate	leuB	GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.85	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R00994,R04426,R10052	RC00084,RC00417,RC03036	br01601,ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU28270	Iso_dh
PHALIAPI_02677	224308.BSU28280	0.0	996.0	COG0119@1|root,COG0119@2|Bacteria,1TP4Y@1239|Firmicutes,4HA6E@91061|Bacilli,1ZC5T@1386|Bacillus	91061|Bacilli	E	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)	leuA	-	2.3.3.13	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	M00432	R01213	RC00004,RC00470,RC02754	br01601,ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS10690,iYO844.BSU28280	HMGL-like,LeuA_dimer
PHALIAPI_02678	224308.BSU28290	3.91e-244	671.0	COG0059@1|root,COG0059@2|Bacteria,1TPI7@1239|Firmicutes,4HADK@91061|Bacilli,1ZCH5@1386|Bacillus	91061|Bacilli	EH	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate	ilvC	-	1.1.1.86	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R03051,R04439,R04440,R05068,R05069,R05071	RC00726,RC00836,RC00837,RC01726	ko00000,ko00001,ko00002,ko01000	-	-	-	IlvC,IlvN
PHALIAPI_02679	224308.BSU28300	5.05e-110	317.0	COG0440@1|root,COG0440@2|Bacteria,1V2AJ@1239|Firmicutes,4HDY5@91061|Bacilli,1ZFP3@1386|Bacillus	91061|Bacilli	E	Acetolactate synthase	ilvN	GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234	2.2.1.6	ko:K01653,ko:K16785	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	M00019,M00570,M00582	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35	-	-	ACT,ACT_5,ALS_ss_C
PHALIAPI_02680	224308.BSU28310	0.0	1134.0	COG0028@1|root,COG0028@2|Bacteria,1TQE8@1239|Firmicutes,4H9VR@91061|Bacilli,1ZB1D@1386|Bacillus	91061|Bacilli	E	Acetolactate synthase	ilvB	-	2.2.1.6	ko:K01652,ko:K16787	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	M00019,M00570,M00582	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35	-	iYO844.BSU28310	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
PHALIAPI_02682	224308.BSU28330	5.72e-99	288.0	COG0454@1|root,COG0454@2|Bacteria,1V4EA@1239|Firmicutes,4HHBF@91061|Bacilli,1ZGG7@1386|Bacillus	91061|Bacilli	K	acetyltransferase	ysnE	GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234	-	ko:K03829	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1
PHALIAPI_02683	224308.BSU28340	3.93e-182	508.0	COG3861@1|root,COG3861@2|Bacteria,1V9A1@1239|Firmicutes,4HISC@91061|Bacilli,1ZE4F@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ysnF	-	-	-	-	-	-	-	-	-	-	-	DUF2382,YflT
PHALIAPI_02685	224308.BSU28350	4.05e-119	340.0	COG0622@1|root,COG0622@2|Bacteria,1VA0U@1239|Firmicutes,4HM24@91061|Bacilli,1ZH0K@1386|Bacillus	91061|Bacilli	S	Phosphoesterase	ysnB	GO:0003674,GO:0005488,GO:0008270,GO:0043167,GO:0043169,GO:0046872,GO:0046914	-	ko:K07095	-	-	-	-	ko00000	-	-	-	Metallophos_2
PHALIAPI_02686	224308.BSU28360	3.05e-132	375.0	COG0127@1|root,COG0127@2|Bacteria,1V6RN@1239|Firmicutes,4HCP6@91061|Bacilli,1ZFJM@1386|Bacillus	91061|Bacilli	F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions	rdgB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	Ham1p_like
PHALIAPI_02687	224308.BSU28370	3.53e-171	478.0	COG0689@1|root,COG0689@2|Bacteria,1TQM3@1239|Firmicutes,4HBH3@91061|Bacilli,1ZBXN@1386|Bacillus	91061|Bacilli	J	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates	rph	GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575	2.7.7.56	ko:K00989	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ham1p_like,RNase_PH,RNase_PH_C
PHALIAPI_02688	224308.BSU28380	8.03e-256	702.0	COG5401@1|root,COG5401@2|Bacteria,1TPQD@1239|Firmicutes,4HB1S@91061|Bacilli,1ZBZJ@1386|Bacillus	91061|Bacilli	S	COG5401 Spore germination protein	gerM	-	-	ko:K06298	-	-	-	-	ko00000	-	-	-	Germane
PHALIAPI_02689	224308.BSU28390	4.49e-194	538.0	COG0796@1|root,COG0796@2|Bacteria,1TPPR@1239|Firmicutes,4HA46@91061|Bacilli,1ZBC9@1386|Bacillus	91061|Bacilli	M	Provides the (R)-glutamate required for cell wall biosynthesis	murI	GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	3.6.1.66,5.1.1.3	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	-	R00260,R00426,R00720,R01855,R02100,R02720,R03531	RC00002,RC00302	ko00000,ko00001,ko01000,ko01011	-	-	iYO844.BSU28390	Asp_Glu_race
PHALIAPI_02690	224308.BSU28400	1.6e-98	286.0	COG1846@1|root,COG1846@2|Bacteria,1VACT@1239|Firmicutes,4HKGN@91061|Bacilli,1ZQ3V@1386|Bacillus	91061|Bacilli	K	helix_turn_helix multiple antibiotic resistance protein	ysmB	-	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_02691	1178537.BA1_03890	1.81e-41	136.0	COG2197@1|root,COG2197@2|Bacteria,1VBZR@1239|Firmicutes,4HKT4@91061|Bacilli,1ZHTA@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	gerE	-	-	ko:K01994	-	-	-	-	ko00000,ko03000	-	-	-	GerE
PHALIAPI_02692	224308.BSU28420	1.08e-101	294.0	COG0824@1|root,COG0824@2|Bacteria,1V6GS@1239|Firmicutes,4HJ05@91061|Bacilli,1ZH3F@1386|Bacillus	91061|Bacilli	S	thioesterase	ysmA	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
PHALIAPI_02693	224308.BSU28430	9.48e-189	523.0	COG0479@1|root,COG0479@2|Bacteria,1TP17@1239|Firmicutes,4HAG7@91061|Bacilli,1ZAPQ@1386|Bacillus	91061|Bacilli	C	succinate dehydrogenase	sdhB	GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0055114,GO:0071944	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_10,Fer4_8
PHALIAPI_02694	224308.BSU28440	0.0	1194.0	COG1053@1|root,COG1053@2|Bacteria,1TPAR@1239|Firmicutes,4HBVG@91061|Bacilli,1ZBRD@1386|Bacillus	91061|Bacilli	C	succinate dehydrogenase	sdhA	GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0022900,GO:0044237,GO:0045333,GO:0055114	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS05640	FAD_binding_2,Succ_DH_flav_C
PHALIAPI_02695	224308.BSU28450	1.35e-140	397.0	COG2009@1|root,COG2009@2|Bacteria,1TQUI@1239|Firmicutes,4HBX0@91061|Bacilli,1ZBB5@1386|Bacillus	91061|Bacilli	C	succinate dehydrogenase	sdhC	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002	-	-	iYO844.BSU28450	Sdh_cyt
PHALIAPI_02696	224308.BSU28460	8.53e-104	300.0	COG1719@1|root,COG1719@2|Bacteria,1VD7N@1239|Firmicutes,4HKV3@91061|Bacilli,1ZQN2@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2507)	yslB	-	-	-	-	-	-	-	-	-	-	-	DUF2507
PHALIAPI_02697	224308.BSU28470	1.13e-274	753.0	COG0527@1|root,COG0527@2|Bacteria,1TPQJ@1239|Firmicutes,4HADX@91061|Bacilli,1ZDA6@1386|Bacillus	91061|Bacilli	E	Belongs to the aspartokinase family	lysC	GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,ACT,ACT_7
PHALIAPI_02698	224308.BSU28490	0.0	1159.0	COG0322@1|root,COG0322@2|Bacteria,1TP4B@1239|Firmicutes,4H9QH@91061|Bacilli,1ZBY1@1386|Bacillus	91061|Bacilli	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	uvrC	GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391	-	ko:K03703	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N
PHALIAPI_02699	1051501.AYTL01000030_gene2925	1.12e-69	210.0	COG3118@1|root,COG3118@2|Bacteria,1VA3Y@1239|Firmicutes,4HKKX@91061|Bacilli,1ZGXM@1386|Bacillus	91061|Bacilli	O	Belongs to the thioredoxin family	trxA	GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
PHALIAPI_02700	224308.BSU28510	0.0	1043.0	COG3534@1|root,COG3534@2|Bacteria,1TR7B@1239|Firmicutes,4HCUX@91061|Bacilli,1ZCNR@1386|Bacillus	91061|Bacilli	G	Alpha-L-arabinofuranosidase C-terminus	xsa	-	3.2.1.55	ko:K01209	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	GH51	-	Alpha-L-AF_C
PHALIAPI_02702	224308.BSU28520	1.23e-227	627.0	COG2025@1|root,COG2025@2|Bacteria,1TPC8@1239|Firmicutes,4HAE2@91061|Bacilli,1ZBCR@1386|Bacillus	91061|Bacilli	C	Electron transfer flavoprotein	etfA	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575	-	ko:K03522	-	-	-	-	ko00000,ko04147	-	-	-	ETF,ETF_alpha
PHALIAPI_02703	224308.BSU28530	1.49e-178	498.0	COG2086@1|root,COG2086@2|Bacteria,1TQA0@1239|Firmicutes,4H9QY@91061|Bacilli,1ZBTA@1386|Bacillus	91061|Bacilli	C	Electron transfer flavoprotein	etfB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114	-	ko:K03521	-	-	-	-	ko00000	-	-	-	ETF
PHALIAPI_02704	224308.BSU28540	2.2e-176	492.0	COG1024@1|root,COG1024@2|Bacteria,1TQ89@1239|Firmicutes,4HB73@91061|Bacilli,1ZCKH@1386|Bacillus	91061|Bacilli	I	Belongs to the enoyl-CoA hydratase isomerase family	fadB	GO:0003674,GO:0003824,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575	4.2.1.17	ko:K13767	ko00071,ko00362,ko01100,ko01120,ko01212,map00071,map00362,map01100,map01120,map01212	M00087	R03026,R04170,R04738,R04740,R04744,R04746	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
PHALIAPI_02705	224308.BSU28550	5.74e-129	367.0	COG1309@1|root,COG1309@2|Bacteria,1TRSH@1239|Firmicutes,4H9RC@91061|Bacilli,1ZAU5@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	fadR	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	ko:K13770	-	-	-	-	ko00000,ko03000	-	-	-	TetR_C_4,TetR_N
PHALIAPI_02706	224308.BSU28560	0.0	1129.0	COG0318@1|root,COG0318@2|Bacteria,1TPSX@1239|Firmicutes,4HA2G@91061|Bacilli,1ZAY1@1386|Bacillus	91061|Bacilli	IQ	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II	lcfA	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
PHALIAPI_02707	224308.BSU28570	3.76e-89	261.0	COG3766@1|root,COG3766@2|Bacteria,1V6MT@1239|Firmicutes,4HH4E@91061|Bacilli,1ZG9Y@1386|Bacillus	91061|Bacilli	S	membrane	yshE	-	-	ko:K08989	-	-	-	-	ko00000	-	-	-	DUF350
PHALIAPI_02708	224308.BSU28580	0.0	1359.0	COG1193@1|root,COG1193@2|Bacteria,1TP5W@1239|Firmicutes,4H9NZ@91061|Bacilli,1ZBJV@1386|Bacillus	91061|Bacilli	L	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity	mutS2	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K07456	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_V,Smr
PHALIAPI_02709	224308.BSU28590	0.0	1113.0	COG1387@1|root,COG1796@1|root,COG1387@2|Bacteria,COG1796@2|Bacteria,1TQ33@1239|Firmicutes,4HAI2@91061|Bacilli,1ZB3A@1386|Bacillus	91061|Bacilli	L	COG1796 DNA polymerase IV (family X)	polX	-	-	ko:K02347	-	-	-	-	ko00000,ko03400	-	-	-	DNA_pol_B_palm,DNA_pol_B_thumb,HHH_5,HHH_8,PHP
PHALIAPI_02710	224308.BSU28600	1.09e-111	322.0	COG1286@1|root,COG1286@2|Bacteria,1V7U0@1239|Firmicutes,4HIUU@91061|Bacilli,1ZDGZ@1386|Bacillus	91061|Bacilli	S	membrane protein, required for colicin V production	yshB	-	-	-	-	-	-	-	-	-	-	-	Colicin_V
PHALIAPI_02711	224308.BSU28610	1.04e-54	171.0	COG3027@1|root,COG3027@2|Bacteria,1VFZR@1239|Firmicutes,4HNRI@91061|Bacilli,1ZHZX@1386|Bacillus	91061|Bacilli	D	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division	zapA	-	-	ko:K09888	-	-	-	-	ko00000,ko03036	-	-	-	ZapA
PHALIAPI_02712	224308.BSU28620	2.76e-218	603.0	COG1039@1|root,COG1039@2|Bacteria,1TQBE@1239|Firmicutes,4H9QR@91061|Bacilli,1ZBHW@1386|Bacillus	91061|Bacilli	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhC	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03471	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DUF3378,RNase_HII
PHALIAPI_02713	224308.BSU28630	0.0	1539.0	COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,1TP98@1239|Firmicutes,4HAQ9@91061|Bacilli,1ZB8G@1386|Bacillus	91061|Bacilli	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	pheT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	B3_4,B5,FDX-ACB,tRNA_bind
PHALIAPI_02714	224308.BSU28640	5.18e-250	686.0	COG0016@1|root,COG0016@2|Bacteria,1TPFW@1239|Firmicutes,4HAVN@91061|Bacilli,1ZANR@1386|Bacillus	91061|Bacilli	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
PHALIAPI_02715	224308.BSU28650	2.57e-170	476.0	COG0566@1|root,COG0566@2|Bacteria,1V3JP@1239|Firmicutes,4HCF5@91061|Bacilli,1ZBTY@1386|Bacillus	91061|Bacilli	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	spoU	-	-	ko:K03437	-	-	-	-	ko00000,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
PHALIAPI_02716	224308.BSU28660	7.27e-42	137.0	2E3SP@1|root,32YQ7@2|Bacteria,1VFJP@1239|Firmicutes,4HNJI@91061|Bacilli,1ZIXT@1386|Bacillus	91061|Bacilli	S	Belongs to the SspI family	sspI	-	-	ko:K06426	-	-	-	-	ko00000	-	-	-	SSPI
PHALIAPI_02717	224308.BSU28670	7.2e-260	712.0	COG3835@1|root,COG3835@2|Bacteria,1UYW2@1239|Firmicutes,4HD2Q@91061|Bacilli,1ZD1P@1386|Bacillus	91061|Bacilli	KT	regulator	cdaR_1	-	-	ko:K02647	-	-	-	-	ko00000,ko03000	-	-	-	Diacid_rec,GGDEF,HTH_30
PHALIAPI_02718	224308.BSU28680	0.0	887.0	COG0277@1|root,COG0277@2|Bacteria,1TPBC@1239|Firmicutes,4H9UU@91061|Bacilli,1ZCQN@1386|Bacillus	91061|Bacilli	C	Glycolate oxidase subunit	glcD	-	1.1.3.15	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	-	R00475	RC00042	ko00000,ko00001,ko01000	-	-	iYO844.BSU28680	FAD-oxidase_C,FAD_binding_4
PHALIAPI_02719	224308.BSU28690	0.0	882.0	COG0247@1|root,COG0247@2|Bacteria,1TR46@1239|Firmicutes,4HAY9@91061|Bacilli,1ZATD@1386|Bacillus	91061|Bacilli	C	Glycolate oxidase	glcF	-	-	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	-	R00475	RC00042	ko00000,ko00001	-	-	-	CCG,Fer4_8
PHALIAPI_02720	1051501.AYTL01000030_gene2946	5.93e-69	211.0	COG0346@1|root,COG0346@2|Bacteria,1V9E0@1239|Firmicutes,4HX0J@91061|Bacilli,1ZHMS@1386|Bacillus	91061|Bacilli	E	Glyoxalase-like domain	-	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase_2
PHALIAPI_02721	224308.BSU28710	0.0	1161.0	COG1966@1|root,COG1966@2|Bacteria,1TQN8@1239|Firmicutes,4H9SU@91061|Bacilli,1ZC6K@1386|Bacillus	91061|Bacilli	T	Carbon starvation protein	cstA	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007154,GO:0008150,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071944	-	ko:K06200	-	-	-	-	ko00000	-	-	-	CstA,CstA_5TM
PHALIAPI_02722	224308.BSU28720	0.0	1030.0	COG3534@1|root,COG3534@2|Bacteria,1TRY9@1239|Firmicutes,4HAZ7@91061|Bacilli,1ZE6H@1386|Bacillus	91061|Bacilli	G	alpha-L-arabinofuranosidase activity	abfA	-	3.2.1.55	ko:K01209	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	GH51	-	Alpha-L-AF_C
PHALIAPI_02723	224308.BSU28730	4.28e-190	529.0	COG0395@1|root,COG0395@2|Bacteria,1TT5G@1239|Firmicutes,4HCVZ@91061|Bacilli,1ZETQ@1386|Bacillus	91061|Bacilli	G	transport system permease	araQ	-	-	ko:K17236	ko02010,map02010	M00602	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.34	-	-	BPD_transp_1
PHALIAPI_02724	224308.BSU28740	3.22e-217	600.0	COG1175@1|root,COG1175@2|Bacteria,1TRSP@1239|Firmicutes,4HDJS@91061|Bacilli,1ZDJF@1386|Bacillus	91061|Bacilli	G	carbohydrate transport	araP	-	-	ko:K17235	ko02010,map02010	M00602	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.34	-	-	BPD_transp_1
PHALIAPI_02725	224308.BSU28750	0.0	867.0	COG1653@1|root,COG1653@2|Bacteria,1TS9Z@1239|Firmicutes,4HAYY@91061|Bacilli,1ZBMD@1386|Bacillus	91061|Bacilli	G	carbohydrate transport	araN	-	-	ko:K17234	ko02010,map02010	M00602	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.34	-	-	SBP_bac_1,SBP_bac_8
PHALIAPI_02726	224308.BSU28760	2.93e-279	764.0	COG0371@1|root,COG0371@2|Bacteria,1VTSP@1239|Firmicutes,4HTK1@91061|Bacilli,1ZR9Q@1386|Bacillus	91061|Bacilli	I	Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species	araM	-	1.1.1.261	ko:K00096	ko00564,map00564	-	R05679,R05680	RC00029	ko00000,ko00001,ko01000	-	-	-	Fe-ADH_2
PHALIAPI_02727	224308.BSU28770	2.88e-185	516.0	COG0647@1|root,COG0647@2|Bacteria,1UZNG@1239|Firmicutes,4HCI1@91061|Bacilli,1ZE6I@1386|Bacillus	91061|Bacilli	G	Haloacid dehalogenase-like hydrolase	araL	-	-	ko:K02101	-	-	-	-	ko00000	-	-	-	Hydrolase_6,Hydrolase_like
PHALIAPI_02728	224308.BSU28780	6.93e-170	473.0	COG0235@1|root,COG0235@2|Bacteria,1TPDV@1239|Firmicutes,4H9W0@91061|Bacilli,1ZDGI@1386|Bacillus	91061|Bacilli	G	COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases	araD	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008742,GO:0009056,GO:0009058,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019566,GO:0019568,GO:0019569,GO:0019572,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046373,GO:0046872,GO:0046914,GO:0051167,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901159,GO:1901575,GO:1901576	5.1.3.4	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	M00550	R05850	RC01479	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase_II
PHALIAPI_02729	224308.BSU28790	0.0	1111.0	COG1069@1|root,COG1069@2|Bacteria,1TP8T@1239|Firmicutes,4HC3A@91061|Bacilli,1ZB10@1386|Bacillus	91061|Bacilli	C	Belongs to the ribulokinase family	araB	-	2.7.1.16	ko:K00853	ko00040,ko01100,map00040,map01100	-	R01526,R02439	RC00002,RC00538	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
PHALIAPI_02730	224308.BSU28800	0.0	1004.0	COG2160@1|root,COG2160@2|Bacteria,1TPXC@1239|Firmicutes,4HAWS@91061|Bacilli,1ZD9A@1386|Bacillus	91061|Bacilli	G	Catalyzes the conversion of L-arabinose to L-ribulose	araA	-	5.3.1.4	ko:K01804	ko00040,ko01100,map00040,map01100	-	R01761	RC00516	ko00000,ko00001,ko01000	-	-	-	Arabinose_Iso_C,Arabinose_Isome
PHALIAPI_02731	224308.BSU28810	4.16e-234	644.0	COG3507@1|root,COG3507@2|Bacteria,1TPHA@1239|Firmicutes,4HBSN@91061|Bacilli,1ZDPS@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 43 family	-	-	3.2.1.99	ko:K06113	-	-	-	-	ko00000,ko01000	-	GH43	-	Glyco_hydro_43
PHALIAPI_02732	224308.BSU28820	1.77e-261	716.0	COG1363@1|root,COG1363@2|Bacteria,1TNZT@1239|Firmicutes,4H9SM@91061|Bacilli,1ZD06@1386|Bacillus	91061|Bacilli	G	COG1363 Cellulase M and related proteins	ysdC	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M42
PHALIAPI_02733	224308.BSU28830	1.96e-89	262.0	29RHG@1|root,30CKE@2|Bacteria,1V4BT@1239|Firmicutes,4HIQA@91061|Bacilli,1ZH08@1386|Bacillus	91061|Bacilli	S	Sigma-w pathway protein YsdB	ysdB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02734	224308.BSU28840	1.27e-59	183.0	COG3326@1|root,COG3326@2|Bacteria,1VEJY@1239|Firmicutes,4HNXQ@91061|Bacilli,1ZIYS@1386|Bacillus	91061|Bacilli	S	Membrane	ysdA	-	-	-	-	-	-	-	-	-	-	-	DUF1294
PHALIAPI_02735	1051501.AYTL01000030_gene2964	3.26e-76	228.0	COG0292@1|root,COG0292@2|Bacteria,1V6DB@1239|Firmicutes,4HH2W@91061|Bacilli,1ZG75@1386|Bacillus	91061|Bacilli	J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit	rplT	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02887	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L20
PHALIAPI_02736	224308.BSU28860	3.93e-37	125.0	COG0291@1|root,COG0291@2|Bacteria,1VF5W@1239|Firmicutes,4HNIQ@91061|Bacilli,1ZJBX@1386|Bacillus	91061|Bacilli	J	Belongs to the bacterial ribosomal protein bL35 family	rpmI	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02916	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L35p
PHALIAPI_02737	224308.BSU28870	1.81e-111	321.0	COG0290@1|root,COG0290@2|Bacteria,1V1RC@1239|Firmicutes,4HFUS@91061|Bacilli,1ZCBZ@1386|Bacillus	91061|Bacilli	J	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins	infC	GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008	-	ko:K02520	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	IF3_C,IF3_N
PHALIAPI_02739	224308.BSU28900	5.34e-150	423.0	COG1346@1|root,COG1346@2|Bacteria,1TRGN@1239|Firmicutes,4IQTD@91061|Bacilli,1ZRNK@1386|Bacillus	91061|Bacilli	M	Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses	lrgB	-	-	ko:K05339	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	LrgB
PHALIAPI_02740	224308.BSU28910	8.47e-85	251.0	COG1380@1|root,COG1380@2|Bacteria,1V9Z2@1239|Firmicutes,4IR9S@91061|Bacilli,1ZHA7@1386|Bacillus	91061|Bacilli	S	Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgB, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses	lrgA	GO:0000270,GO:0003674,GO:0005215,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009056,GO:0009057,GO:0009253,GO:0015031,GO:0015833,GO:0030203,GO:0033036,GO:0042886,GO:0043170,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071704,GO:0071705,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575	-	ko:K05338	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	1.E.14.1	-	-	LrgA
PHALIAPI_02741	224308.BSU28920	3.39e-167	468.0	COG3279@1|root,COG3279@2|Bacteria,1V14X@1239|Firmicutes,4HDIC@91061|Bacilli,1ZC3U@1386|Bacillus	91061|Bacilli	T	COG3279 Response regulator of the LytR AlgR family	lytT	GO:0000156,GO:0000160,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007	-	ko:K07705	ko02020,map02020	M00492	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	LytTR,Response_reg
PHALIAPI_02742	224308.BSU28930	0.0	1117.0	COG3275@1|root,COG3275@2|Bacteria,1VTXF@1239|Firmicutes,4H9Z1@91061|Bacilli,1ZBKQ@1386|Bacillus	91061|Bacilli	T	Histidine kinase	lytS	-	2.7.13.3	ko:K07704	ko02020,map02020	M00492	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	5TM-5TMR_LYT,GAF_3,HATPase_c,His_kinase
PHALIAPI_02743	224308.BSU28940	1.2e-190	528.0	COG1011@1|root,COG1011@2|Bacteria,1TS3W@1239|Firmicutes,4HADE@91061|Bacilli,1ZBN8@1386|Bacillus	91061|Bacilli	S	HAD-hyrolase-like	ysaA	-	3.1.3.5,3.8.1.2	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346,R05287	RC00017,RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
PHALIAPI_02744	224308.BSU28950	0.0	1271.0	COG0441@1|root,COG0441@2|Bacteria,1TP78@1239|Firmicutes,4HABZ@91061|Bacilli,1ZB5W@1386|Bacillus	91061|Bacilli	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)	thrS	GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
PHALIAPI_02745	224308.BSU28960	1.41e-204	565.0	28MGE@1|root,2ZATN@2|Bacteria,1UC5R@1239|Firmicutes,4HESX@91061|Bacilli,1ZRWW@1386|Bacillus	91061|Bacilli	S	YtxC-like family	ytxC	-	-	-	-	-	-	-	-	-	-	-	YtxC
PHALIAPI_02746	224308.BSU28970	1.22e-137	390.0	COG0398@1|root,COG0398@2|Bacteria,1V3J1@1239|Firmicutes,4HHXX@91061|Bacilli,1ZEPX@1386|Bacillus	91061|Bacilli	S	SNARE associated Golgi protein	ytxB	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
PHALIAPI_02747	224308.BSU28980	1.22e-220	608.0	COG1484@1|root,COG1484@2|Bacteria,1TPZX@1239|Firmicutes,4HABS@91061|Bacilli,1ZB6G@1386|Bacillus	91061|Bacilli	L	Primosomal protein DnaI	dnaI	GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837	-	ko:K11144	-	-	-	-	ko00000,ko03032	-	-	-	DnaI_N,IstB_IS21
PHALIAPI_02748	224308.BSU28990	0.0	923.0	COG3611@1|root,COG3611@2|Bacteria,1TSBB@1239|Firmicutes,4H9RI@91061|Bacilli,1ZBJY@1386|Bacillus	91061|Bacilli	L	Membrane attachment protein	dnaB	-	-	ko:K03346	-	-	-	-	ko00000,ko03032	-	-	-	DnaB_2
PHALIAPI_02749	224308.BSU29000	2.42e-105	304.0	COG1327@1|root,COG1327@2|Bacteria,1V3JA@1239|Firmicutes,4HGXA@91061|Bacilli,1ZFS0@1386|Bacillus	91061|Bacilli	K	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	nrdR	-	-	ko:K07738	-	-	-	-	ko00000,ko03000	-	-	-	ATP-cone
PHALIAPI_02750	1051501.AYTL01000030_gene2978	2.42e-88	259.0	COG1586@1|root,COG1586@2|Bacteria,1V3U2@1239|Firmicutes,4HH1F@91061|Bacilli,1ZFPA@1386|Bacillus	91061|Bacilli	E	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine	speH	-	4.1.1.50	ko:K01611	ko00270,ko00330,ko01100,map00270,map00330,map01100	M00034,M00133	R00178	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	AdoMet_dc
PHALIAPI_02751	224308.BSU29020	1.22e-246	677.0	COG0057@1|root,COG0057@2|Bacteria,1TNYU@1239|Firmicutes,4H9NS@91061|Bacilli,1ZCF9@1386|Bacillus	91061|Bacilli	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family	gapB	GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016491,GO:0016620,GO:0016903,GO:0019318,GO:0019319,GO:0036094,GO:0043891,GO:0044238,GO:0044281,GO:0044283,GO:0046364,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	Gp_dh_C,Gp_dh_N
PHALIAPI_02752	224308.BSU29030	9.85e-88	257.0	COG1733@1|root,COG1733@2|Bacteria,1V43K@1239|Firmicutes,4HH01@91061|Bacilli,1ZGIV@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ytcD	-	-	-	-	-	-	-	-	-	-	-	HxlR
PHALIAPI_02753	224308.BSU29040	4.46e-259	713.0	COG0477@1|root,COG2814@2|Bacteria,1TQXU@1239|Firmicutes,4HAYB@91061|Bacilli,1ZQ77@1386|Bacillus	91061|Bacilli	EGP	-transporter	ytbD	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K19577	-	-	-	-	ko00000,ko02000	2.A.1.2.65	-	-	MFS_1,Sugar_tr
PHALIAPI_02754	224308.BSU29050	1.85e-204	565.0	COG0656@1|root,COG0656@2|Bacteria,1TPM1@1239|Firmicutes,4HARE@91061|Bacilli,1ZC55@1386|Bacillus	91061|Bacilli	S	reductase	ytbE	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
PHALIAPI_02755	224308.BSU29060	4.67e-125	357.0	COG0237@1|root,COG0237@2|Bacteria,1V6FS@1239|Firmicutes,4HII3@91061|Bacilli,1ZFSI@1386|Bacillus	91061|Bacilli	F	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A	coaE	GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.24	ko:K00859	ko00770,ko01100,map00770,map01100	M00120	R00130	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS08510	CoaE
PHALIAPI_02756	224308.BSU29070	1.68e-138	392.0	COG1971@1|root,COG1971@2|Bacteria,1V4BC@1239|Firmicutes,4HH29@91061|Bacilli,1ZCPR@1386|Bacillus	91061|Bacilli	P	Probably functions as a manganese efflux pump	ytaF	-	-	-	-	-	-	-	-	-	-	-	Mntp
PHALIAPI_02757	224308.BSU29080	3.88e-200	554.0	COG0266@1|root,COG0266@2|Bacteria,1TPM9@1239|Firmicutes,4H9Q7@91061|Bacilli,1ZCC9@1386|Bacillus	91061|Bacilli	L	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates	fpg	-	3.2.2.23,4.2.99.18	ko:K10563	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Fapy_DNA_glyco,H2TH,zf-FPG_IleRS
PHALIAPI_02758	224308.BSU29090	0.0	1693.0	COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1TPKJ@1239|Firmicutes,4H9S7@91061|Bacilli,1ZB6Y@1386|Bacillus	91061|Bacilli	L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	polA	GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A
PHALIAPI_02759	224308.BSU29100	0.0	1111.0	COG5002@1|root,COG5002@2|Bacteria,1TQ1H@1239|Firmicutes,4HB1B@91061|Bacilli,1ZC0T@1386|Bacillus	91061|Bacilli	T	Signal transduction histidine kinase	phoR	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA,PAS,PAS_4,PAS_9,sCache_like
PHALIAPI_02760	224308.BSU29110	3.27e-169	473.0	COG0745@1|root,COG0745@2|Bacteria,1TPWS@1239|Firmicutes,4H9KP@91061|Bacilli,1ZBGS@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	phoP	-	-	ko:K07658	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_02761	224308.BSU29120	1.04e-217	601.0	COG0039@1|root,COG0039@2|Bacteria,1TPSY@1239|Firmicutes,4HB0Z@91061|Bacilli,1ZC27@1386|Bacillus	91061|Bacilli	C	Catalyzes the reversible oxidation of malate to oxaloacetate	mdh	GO:0003674,GO:0003824,GO:0004470,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350	1.1.1.27,1.1.1.37	ko:K00016,ko:K00024	ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922	M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740	R00342,R00703,R01000,R03104,R07136	RC00031,RC00044	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Ldh_1_C,Ldh_1_N
PHALIAPI_02762	224308.BSU29130	9.27e-309	841.0	COG0538@1|root,COG0538@2|Bacteria,1UHPE@1239|Firmicutes,4H9US@91061|Bacilli,1ZBWV@1386|Bacillus	91061|Bacilli	C	isocitrate	icd	-	1.1.1.42	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	M00009,M00010,M00173,M00740	R00267,R00268,R01899	RC00001,RC00084,RC00114,RC00626,RC02801	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
PHALIAPI_02763	224308.BSU29140	1.36e-266	730.0	COG0372@1|root,COG0372@2|Bacteria,1TPPS@1239|Firmicutes,4H9YE@91061|Bacilli,1ZBAY@1386|Bacillus	91061|Bacilli	C	Belongs to the citrate synthase family	citZ	-	2.3.3.1	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00740	R00351	RC00004,RC00067	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Citrate_synt
PHALIAPI_02764	224308.BSU29150	9.38e-95	277.0	COG2707@1|root,COG2707@2|Bacteria,1V7JN@1239|Firmicutes,4HINS@91061|Bacilli,1ZQTM@1386|Bacillus	91061|Bacilli	S	membrane	ytwI	-	-	-	-	-	-	-	-	-	-	-	DUF441
PHALIAPI_02765	224308.BSU29160	1.58e-244	674.0	COG0628@1|root,COG0628@2|Bacteria,1TS4S@1239|Firmicutes,4HC6G@91061|Bacilli,1ZBXK@1386|Bacillus	91061|Bacilli	S	sporulation integral membrane protein YtvI	ytvI	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
PHALIAPI_02766	224308.BSU29170	1.91e-81	241.0	COG3030@1|root,COG3030@2|Bacteria,1VF5Y@1239|Firmicutes,4HNQ9@91061|Bacilli,1ZQRP@1386|Bacillus	91061|Bacilli	S	COG3030 Protein affecting phage T7 exclusion by the F plasmid	fxsA	-	-	ko:K07113	-	-	-	-	ko00000	-	-	-	FxsA
PHALIAPI_02767	224308.BSU29180	0.0	1111.0	COG0469@1|root,COG0469@2|Bacteria,1TPGG@1239|Firmicutes,4H9VY@91061|Bacilli,1ZCDT@1386|Bacillus	91061|Bacilli	G	Belongs to the pyruvate kinase family	pyk	GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065	2.7.1.40	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	M00001,M00002,M00049,M00050	R00200,R00430,R01138,R01858,R02320	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	PEP-utilizers,PK,PK_C
PHALIAPI_02768	224308.BSU29190	4.65e-229	630.0	COG0205@1|root,COG0205@2|Bacteria,1TPF4@1239|Firmicutes,4HAPN@91061|Bacilli,1ZB3D@1386|Bacillus	91061|Bacilli	F	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis	pfkA	GO:0003674,GO:0003824,GO:0003872,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061615,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576	2.7.1.11	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	M00001,M00345	R00756,R03236,R03237,R03238,R03239,R04779	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	-	-	iYO844.BSU29190	PFK
PHALIAPI_02769	224308.BSU29200	5.68e-233	641.0	COG0825@1|root,COG0825@2|Bacteria,1UHNS@1239|Firmicutes,4HA4C@91061|Bacilli,1ZC5V@1386|Bacillus	91061|Bacilli	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA	accA	-	2.1.3.15,6.4.1.2	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	ACCA
PHALIAPI_02770	224308.BSU29210	2.17e-208	576.0	COG0777@1|root,COG0777@2|Bacteria,1TP4U@1239|Firmicutes,4HAI7@91061|Bacilli,1ZB3M@1386|Bacillus	91061|Bacilli	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA	accD	-	2.1.3.15,6.4.1.2	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
PHALIAPI_02771	224308.BSU29220	8.53e-287	784.0	COG0281@1|root,COG0281@2|Bacteria,1TPJ3@1239|Firmicutes,4H9WR@91061|Bacilli,1ZBAH@1386|Bacillus	91061|Bacilli	C	Malate dehydrogenase	ytsJ	-	1.1.1.38	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	-	R00214	RC00105	ko00000,ko00001,ko01000	-	-	-	Malic_M,malic
PHALIAPI_02772	224308.BSU29230	0.0	2174.0	COG0587@1|root,COG0587@2|Bacteria,1TPYG@1239|Firmicutes,4H9T3@91061|Bacilli,1ZCIC@1386|Bacillus	91061|Bacilli	L	DNA polymerase	dnaE	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
PHALIAPI_02773	224308.BSU29239	2.45e-75	225.0	2CBNY@1|root,330BE@2|Bacteria,1VGPH@1239|Firmicutes,4HNX7@91061|Bacilli,1ZH6P@1386|Bacillus	91061|Bacilli	S	Sporulation protein YtrH	ytrH	-	-	-	-	-	-	-	-	-	-	-	Spore_YtrH
PHALIAPI_02774	224308.BSU29240	5.12e-112	322.0	2AV7G@1|root,31KY3@2|Bacteria,1V73K@1239|Firmicutes,4HJ3F@91061|Bacilli,1ZHIX@1386|Bacillus	91061|Bacilli	-	-	ytrI	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02775	224308.BSU29249	1.15e-39	131.0	2EK73@1|root,33DXG@2|Bacteria,1VJ98@1239|Firmicutes,4HNYT@91061|Bacilli,1ZIJ7@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02776	224308.BSU29250	1.24e-230	634.0	COG0618@1|root,COG0618@2|Bacteria,1TPXX@1239|Firmicutes,4H9ZW@91061|Bacilli,1ZB08@1386|Bacillus	91061|Bacilli	S	COG0618 Exopolyphosphatase-related proteins	nrnA	-	3.1.13.3,3.1.3.7	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
PHALIAPI_02777	224308.BSU29260	2.15e-63	194.0	2E1U1@1|root,32X3Q@2|Bacteria,1VD0Y@1239|Firmicutes,4HNCK@91061|Bacilli,1ZHYC@1386|Bacillus	91061|Bacilli	S	YtpI-like protein	ytpI	-	-	-	-	-	-	-	-	-	-	-	YtpI
PHALIAPI_02778	224308.BSU29270	4.61e-308	840.0	COG4109@1|root,COG4109@2|Bacteria,1TPU6@1239|Firmicutes,4HB62@91061|Bacilli,1ZB1Q@1386|Bacillus	91061|Bacilli	K	transcriptional regulator containing CBS domains	ytoI	-	-	-	-	-	-	-	-	-	-	-	4HBT,CBS,DRTGG,GntR,HTH_24
PHALIAPI_02779	224308.BSU29280	2.14e-204	566.0	COG0730@1|root,COG0730@2|Bacteria,1UV0H@1239|Firmicutes,4HDSG@91061|Bacilli,1ZBC2@1386|Bacillus	91061|Bacilli	S	membrane transporter protein	ytnM	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
PHALIAPI_02780	224308.BSU29290	3.56e-298	813.0	COG1473@1|root,COG1473@2|Bacteria,1TPD7@1239|Firmicutes,4H9WQ@91061|Bacilli,1ZB09@1386|Bacillus	91061|Bacilli	E	hydrolase activity	hipO2	-	-	ko:K01436,ko:K21613	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
PHALIAPI_02781	224308.BSU29300	2.45e-157	441.0	COG0196@1|root,COG0196@2|Bacteria,1VXBN@1239|Firmicutes,4HXKJ@91061|Bacilli,1ZHUP@1386|Bacillus	91061|Bacilli	H	Riboflavin kinase	-	-	2.7.1.26,2.7.7.2	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Flavokinase
PHALIAPI_02782	224308.BSU29310	0.0	883.0	COG2141@1|root,COG2141@2|Bacteria,1TQZ0@1239|Firmicutes,4HAF9@91061|Bacilli,1ZBUG@1386|Bacillus	91061|Bacilli	C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	ytnJ	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
PHALIAPI_02783	224308.BSU29320	6.34e-56	174.0	COG0695@1|root,COG0695@2|Bacteria,1VFJ0@1239|Firmicutes,4HKXP@91061|Bacilli,1ZHVX@1386|Bacillus	91061|Bacilli	O	COG0695 Glutaredoxin and related proteins	ytnI	-	-	-	-	-	-	-	-	-	-	-	Glutaredoxin
PHALIAPI_02784	224308.BSU29330	5.91e-235	647.0	COG2141@1|root,COG2141@2|Bacteria,1TPRS@1239|Firmicutes,4H9R2@91061|Bacilli,1ZB1E@1386|Bacillus	91061|Bacilli	C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	ytmO	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
PHALIAPI_02785	224308.BSU29340	2.21e-181	505.0	COG1126@1|root,COG1126@2|Bacteria,1TNYD@1239|Firmicutes,4H9WY@91061|Bacilli,1ZB2E@1386|Bacillus	91061|Bacilli	E	COG1126 ABC-type polar amino acid transport system, ATPase component	tcyN	-	-	ko:K16960	ko02010,map02010	M00585	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3.13	-	-	ABC_tran
PHALIAPI_02786	224308.BSU29350	3.75e-152	429.0	COG0765@1|root,COG0765@2|Bacteria,1V1PT@1239|Firmicutes,4HUB0@91061|Bacilli,1ZQ0Y@1386|Bacillus	91061|Bacilli	U	Binding-protein-dependent transport system inner membrane component	-	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K16959	ko02010,map02010	M00585	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.13	-	-	BPD_transp_1
PHALIAPI_02787	224308.BSU29360	6.75e-157	441.0	COG0765@1|root,COG0765@2|Bacteria,1TY31@1239|Firmicutes,4HBN2@91061|Bacilli,1ZCP3@1386|Bacillus	91061|Bacilli	P	Binding-protein-dependent transport system inner membrane component	ytmL	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K16958,ko:K16959	ko02010,map02010	M00585	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.13	-	-	BPD_transp_1
PHALIAPI_02788	224308.BSU29370	2.98e-185	515.0	COG0834@1|root,COG0834@2|Bacteria,1UKNE@1239|Firmicutes,4HD8M@91061|Bacilli,1ZQ0Z@1386|Bacillus	91061|Bacilli	M	Bacterial periplasmic substrate-binding proteins	tcyK	-	-	ko:K16957	ko02010,map02010	M00585	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.13	-	-	SBP_bac_3
PHALIAPI_02789	224308.BSU29380	2.61e-194	538.0	COG0834@1|root,COG0834@2|Bacteria,1TR13@1239|Firmicutes,4HBRP@91061|Bacilli,1ZQ10@1386|Bacillus	91061|Bacilli	ET	Bacterial periplasmic substrate-binding proteins	-	-	-	ko:K16956,ko:K16957,ko:K16961	ko02010,map02010	M00585,M00586	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.13	-	-	SBP_bac_3
PHALIAPI_02790	224308.BSU29390	3.42e-129	366.0	COG0454@1|root,COG0454@2|Bacteria,1V528@1239|Firmicutes,4HH0W@91061|Bacilli,1ZHM1@1386|Bacillus	91061|Bacilli	K	Acetyltransferase (GNAT) domain	ytmI	-	-	ko:K00680	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_7
PHALIAPI_02791	224308.BSU29400	1.13e-219	606.0	COG0583@1|root,COG0583@2|Bacteria,1TS2I@1239|Firmicutes,4HEA9@91061|Bacilli,1ZQ2F@1386|Bacillus	91061|Bacilli	K	LysR substrate binding domain	ytlI	GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363,GO:1990837	-	ko:K21960	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
PHALIAPI_02792	224308.BSU29410	1.91e-166	464.0	COG2220@1|root,COG2220@2|Bacteria,1TQR1@1239|Firmicutes,4HBM0@91061|Bacilli,1ZBI0@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0173 family	ytkL	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2,Lactamase_B_3
PHALIAPI_02793	224308.BSU29420	8.04e-182	506.0	COG1028@1|root,COG1028@2|Bacteria,1TSQV@1239|Firmicutes,4HB3U@91061|Bacilli,1ZC75@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	ytkK	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
PHALIAPI_02795	224308.BSU29440	0.0	910.0	COG0165@1|root,COG0165@2|Bacteria,1TNZ6@1239|Firmicutes,4HB24@91061|Bacilli,1ZD3C@1386|Bacillus	91061|Bacilli	E	argininosuccinate lyase	argH	GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.3.2.1	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	M00029,M00844,M00845	R01086	RC00445,RC00447	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ASL_C2,Lyase_1
PHALIAPI_02796	224308.BSU29450	1.06e-297	811.0	COG0137@1|root,COG0137@2|Bacteria,1TP3X@1239|Firmicutes,4HA1E@91061|Bacilli,1ZC1P@1386|Bacillus	91061|Bacilli	E	Belongs to the argininosuccinate synthase family. Type 1 subfamily	argG	GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	6.3.4.5	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	M00029,M00844,M00845	R01954	RC00380,RC00629	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	iSB619.SA_RS04675	Arginosuc_synth
PHALIAPI_02797	224308.BSU29460	2.72e-113	325.0	COG0521@1|root,COG0521@2|Bacteria,1V3XM@1239|Firmicutes,4HH5V@91061|Bacilli,1ZFK1@1386|Bacillus	91061|Bacilli	H	May be involved in the biosynthesis of molybdopterin	moaB	-	2.7.7.75	ko:K03638	ko00790,ko01100,map00790,map01100	-	R09726	RC00002	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth
PHALIAPI_02798	224308.BSU29470	4.69e-281	768.0	COG0282@1|root,COG0282@2|Bacteria,1TQ22@1239|Firmicutes,4HA7K@91061|Bacilli,1ZDDX@1386|Bacillus	91061|Bacilli	F	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction	ackA	-	2.7.2.1	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00357,M00579	R00315,R01353	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	Acetate_kinase
PHALIAPI_02799	224308.BSU29480	1.79e-222	615.0	COG0827@1|root,COG0827@2|Bacteria,1TRIQ@1239|Firmicutes,4H9SE@91061|Bacilli,1ZBZ7@1386|Bacillus	91061|Bacilli	L	DNA methylase	ytxK	-	2.1.1.72	ko:K00571	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	N6_Mtase
PHALIAPI_02800	224308.BSU29490	1.93e-116	333.0	COG2077@1|root,COG2077@2|Bacteria,1V474@1239|Firmicutes,4HFMW@91061|Bacilli,1ZARA@1386|Bacillus	91061|Bacilli	O	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides	tpx	-	1.11.1.15	ko:K11065	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA,Redoxin
PHALIAPI_02801	224308.BSU29500	4.34e-94	275.0	COG3874@1|root,COG3874@2|Bacteria,1V6H7@1239|Firmicutes,4HIG7@91061|Bacilli,1ZG9C@1386|Bacillus	91061|Bacilli	S	Sporulation protein YtfJ	ytfJ	-	-	-	-	-	-	-	-	-	-	-	Spore_YtfJ
PHALIAPI_02802	224308.BSU29510	8.34e-149	420.0	2E5MF@1|root,330CC@2|Bacteria,1VEG0@1239|Firmicutes,4HMVE@91061|Bacilli,1ZBQY@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2953)	ytfI	-	-	-	-	-	-	-	-	-	-	-	DUF2953
PHALIAPI_02803	224308.BSU29520	1.37e-110	318.0	COG1714@1|root,COG1714@2|Bacteria,1VATS@1239|Firmicutes,4HKJ3@91061|Bacilli,1ZFC7@1386|Bacillus	91061|Bacilli	S	RDD family	yteJ	-	-	-	-	-	-	-	-	-	-	-	RDD
PHALIAPI_02804	224308.BSU29530	1.38e-229	633.0	COG0616@1|root,COG0616@2|Bacteria,1TRQW@1239|Firmicutes,4HB4R@91061|Bacilli,1ZBTV@1386|Bacillus	91061|Bacilli	OU	signal peptide peptidase SppA	sppA	-	-	ko:K04773	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S49
PHALIAPI_02805	224308.BSU29540	2.4e-189	526.0	COG0061@1|root,COG0061@2|Bacteria,1TRXB@1239|Firmicutes,4HCEW@91061|Bacilli,1ZB1S@1386|Bacillus	91061|Bacilli	G	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	nadK2	-	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100	-	R00104	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	NAD_kinase
PHALIAPI_02806	224308.BSU29550	0.0	1069.0	COG1574@1|root,COG1574@2|Bacteria,1TQ6G@1239|Firmicutes,4H9T6@91061|Bacilli,1ZBDY@1386|Bacillus	91061|Bacilli	S	amidohydrolase	ytcJ	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
PHALIAPI_02807	224308.BSU29560	0.0	1048.0	COG0365@1|root,COG0365@2|Bacteria,1TQTI@1239|Firmicutes,4H9PN@91061|Bacilli,1ZCDC@1386|Bacillus	91061|Bacilli	I	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases	ytcI	GO:0003674,GO:0003824,GO:0003996,GO:0004321,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0015645,GO:0016053,GO:0016405,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0016874,GO:0016877,GO:0016878,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901576	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
PHALIAPI_02808	224308.BSU29570	2.12e-40	133.0	2BX75@1|root,32YCI@2|Bacteria,1VEDY@1239|Firmicutes,4HNHZ@91061|Bacilli,1ZIWS@1386|Bacillus	91061|Bacilli	S	spore protein	-	-	-	ko:K06418,ko:K06419,ko:K06420	-	-	-	-	ko00000	-	-	-	SASP
PHALIAPI_02809	224308.BSU29580	5.14e-288	786.0	COG0301@1|root,COG0301@2|Bacteria,1TPNW@1239|Firmicutes,4HAV9@91061|Bacilli,1ZBZY@1386|Bacillus	91061|Bacilli	H	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS	thiI	-	2.8.1.4	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07461	-	ko00000,ko00001,ko01000,ko03016	-	-	-	THUMP,ThiI
PHALIAPI_02810	224308.BSU29590	3.9e-266	729.0	COG1104@1|root,COG1104@2|Bacteria,1TP21@1239|Firmicutes,4HAEE@91061|Bacilli,1ZBHY@1386|Bacillus	91061|Bacilli	E	Cysteine desulfurase	iscS2	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
PHALIAPI_02811	224308.BSU29600	1.17e-304	832.0	COG1114@1|root,COG1114@2|Bacteria,1TQIS@1239|Firmicutes,4HAKA@91061|Bacilli,1ZAST@1386|Bacillus	91061|Bacilli	E	Component of the transport system for branched-chain amino acids	braB	GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903785,GO:1903825,GO:1905039	-	ko:K03311	-	-	-	-	ko00000	2.A.26	-	-	Branch_AA_trans
PHALIAPI_02812	224308.BSU29610	0.0	977.0	COG4477@1|root,COG4477@2|Bacteria,1TQR7@1239|Firmicutes,4HA15@91061|Bacilli,1ZAWX@1386|Bacillus	91061|Bacilli	D	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization	ezrA	GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000921,GO:0005575,GO:0005623,GO:0005886,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0022402,GO:0022607,GO:0031106,GO:0032185,GO:0032506,GO:0034622,GO:0043933,GO:0044085,GO:0044464,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051301,GO:0051302,GO:0051781,GO:0061640,GO:0065003,GO:0065007,GO:0070925,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047	-	ko:K06286	-	-	-	-	ko00000,ko03036	-	-	-	EzrA
PHALIAPI_02813	224308.BSU29620	1.77e-196	544.0	COG1387@1|root,COG1387@2|Bacteria,1TQQX@1239|Firmicutes,4H9P1@91061|Bacilli,1ZCA3@1386|Bacillus	91061|Bacilli	E	COG1387 Histidinol phosphatase and related hydrolases of the PHP family	hisK	GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042578,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	3.1.3.15	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R03013	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PHP,PHP_C
PHALIAPI_02814	224308.BSU29630	6.92e-141	398.0	COG1309@1|root,COG1309@2|Bacteria,1V6TA@1239|Firmicutes,4HISQ@91061|Bacilli,1ZGRH@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yttP	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_02815	224308.BSU29640	1.95e-114	328.0	COG1956@1|root,COG1956@2|Bacteria,1V6GQ@1239|Firmicutes,4HH7X@91061|Bacilli,1ZFMG@1386|Bacillus	91061|Bacilli	T	GAF domain-containing protein	ytsP	-	1.8.4.14	ko:K08968	ko00270,map00270	-	R02025	RC00639	ko00000,ko00001,ko01000	-	-	-	GAF_2
PHALIAPI_02816	224308.BSU29650	0.0	1114.0	COG2199@1|root,COG2203@1|root,COG2199@2|Bacteria,COG2203@2|Bacteria,1TQ2X@1239|Firmicutes,4HA6T@91061|Bacilli,1ZCE7@1386|Bacillus	91061|Bacilli	T	COG2199 FOG GGDEF domain	ytrP	-	-	-	-	-	-	-	-	-	-	-	GAF_2,GAF_3,GGDEF
PHALIAPI_02817	224308.BSU29660	2.01e-141	399.0	COG0522@1|root,COG0522@2|Bacteria,1TR0J@1239|Firmicutes,4HAC9@91061|Bacilli,1ZCEB@1386|Bacillus	91061|Bacilli	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit	rpsD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112	-	ko:K02986	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S4,S4
PHALIAPI_02819	224308.BSU29670	2.16e-302	825.0	COG0162@1|root,COG0162@2|Bacteria,1TPGN@1239|Firmicutes,4H9YV@91061|Bacilli,1ZBY9@1386|Bacillus	91061|Bacilli	J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)	tyrS	GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564	6.1.1.1	ko:K01866	ko00970,map00970	M00359,M00360	R02918	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	S4,tRNA-synt_1b
PHALIAPI_02820	224308.BSU29680	0.0	1159.0	COG0365@1|root,COG0365@2|Bacteria,1TQTI@1239|Firmicutes,4H9PN@91061|Bacilli,1ZBDX@1386|Bacillus	91061|Bacilli	I	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases	acsA	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
PHALIAPI_02821	224308.BSU29690	2.43e-156	437.0	COG0454@1|root,COG0454@2|Bacteria,1TSEY@1239|Firmicutes,4HA1V@91061|Bacilli,1ZANI@1386|Bacillus	91061|Bacilli	K	Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue	acuA	GO:0001101,GO:0003674,GO:0003824,GO:0006066,GO:0006355,GO:0006950,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009847,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010034,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016407,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019152,GO:0019219,GO:0019222,GO:0019751,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032502,GO:0033554,GO:0034077,GO:0034078,GO:0034311,GO:0034313,GO:0042149,GO:0042180,GO:0042182,GO:0042221,GO:0042594,GO:0042844,GO:0042846,GO:0043894,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0045013,GO:0045014,GO:0045149,GO:0045150,GO:0045892,GO:0045934,GO:0045990,GO:0046015,GO:0046164,GO:0046174,GO:0046677,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0055114,GO:0060255,GO:0061984,GO:0061985,GO:0061986,GO:0065007,GO:0070887,GO:0071229,GO:0071236,GO:0071310,GO:0071311,GO:0071496,GO:0071704,GO:0080090,GO:1901575,GO:1901615,GO:1901616,GO:1901700,GO:1901701,GO:1902652,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141	-	ko:K04766	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1
PHALIAPI_02822	224308.BSU29700	6.16e-152	427.0	COG0517@1|root,COG0517@2|Bacteria,1V7SC@1239|Firmicutes,4HGJP@91061|Bacilli,1ZRPY@1386|Bacillus	91061|Bacilli	S	Domain in cystathionine beta-synthase and other proteins.	acuB	GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	-	ko:K04767	-	-	-	-	ko00000	-	-	-	ACT,CBS
PHALIAPI_02823	224308.BSU29710	3.09e-291	793.0	COG0123@1|root,COG0123@2|Bacteria,1TQF7@1239|Firmicutes,4HBTF@91061|Bacilli,1ZC2K@1386|Bacillus	91061|Bacilli	BQ	histone deacetylase	acuC	-	-	ko:K04768	-	-	-	-	ko00000	-	-	iYO844.BSU29710	Hist_deacetyl
PHALIAPI_02824	224308.BSU29720	1.6e-161	453.0	COG1360@1|root,COG1360@2|Bacteria,1UXY4@1239|Firmicutes,4HCCI@91061|Bacilli,1ZB4F@1386|Bacillus	91061|Bacilli	N	Flagellar motor protein	ytxE	-	-	ko:K02557	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	MotB_plug,OmpA
PHALIAPI_02825	224308.BSU29730	6.84e-187	520.0	COG1291@1|root,COG1291@2|Bacteria,1TRH1@1239|Firmicutes,4HAXG@91061|Bacilli,1ZB8I@1386|Bacillus	91061|Bacilli	N	flagellar motor	motP	GO:0001539,GO:0005575,GO:0005623,GO:0005886,GO:0006928,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0040011,GO:0044425,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071944,GO:0071973,GO:0071978,GO:0097588	-	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	MotA_ExbB
PHALIAPI_02826	224308.BSU29740	4.16e-235	647.0	COG1609@1|root,COG1609@2|Bacteria,1TQ7K@1239|Firmicutes,4H9NG@91061|Bacilli,1ZCFZ@1386|Bacillus	91061|Bacilli	K	catabolite control protein A	ccpA	GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
PHALIAPI_02827	224308.BSU29750	7.64e-250	686.0	COG1605@1|root,COG2876@1|root,COG1605@2|Bacteria,COG2876@2|Bacteria,1TP61@1239|Firmicutes,4HB03@91061|Bacilli,1ZB0X@1386|Bacillus	91061|Bacilli	E	Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate	aroA	-	2.5.1.54,5.4.99.5	ko:K03856,ko:K13853	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022,M00024,M00025	R01715,R01826	RC00435,RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_2,DAHP_synth_1
PHALIAPI_02828	224308.BSU29760	1.57e-71	215.0	COG3118@1|root,COG3118@2|Bacteria,1VEPC@1239|Firmicutes,4HNXE@91061|Bacilli,1ZI6R@1386|Bacillus	91061|Bacilli	O	Protein of unknown function (DUF2847)	ytxJ	-	-	-	-	-	-	-	-	-	-	-	DUF2847
PHALIAPI_02829	224308.BSU29770	3.17e-30	114.0	COG4980@1|root,COG4980@2|Bacteria,1VFY7@1239|Firmicutes,4HNWV@91061|Bacilli,1ZEKS@1386|Bacillus	91061|Bacilli	S	COG4980 Gas vesicle protein	ytxH	-	-	-	-	-	-	-	-	-	-	-	YtxH
PHALIAPI_02830	224308.BSU29780	1.67e-63	197.0	COG4768@1|root,COG4768@2|Bacteria,1VAXN@1239|Firmicutes,4HM93@91061|Bacilli,1ZGYS@1386|Bacillus	91061|Bacilli	S	protein containing a divergent version of the methyl-accepting chemotaxis-like domain	ytxG	-	-	-	-	-	-	-	-	-	-	-	DUF948
PHALIAPI_02831	224308.BSU29790	0.0	876.0	COG0773@1|root,COG0773@2|Bacteria,1TQ5H@1239|Firmicutes,4HAR4@91061|Bacilli,1ZB5U@1386|Bacillus	91061|Bacilli	M	Belongs to the MurCDEF family	murC	-	6.3.2.8	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
PHALIAPI_02832	224308.BSU29805	0.0	1630.0	COG1674@1|root,COG1674@2|Bacteria,1TPJR@1239|Firmicutes,4HA1S@91061|Bacilli,1ZAYY@1386|Bacillus	91061|Bacilli	D	Belongs to the FtsK SpoIIIE SftA family	sftA	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_SpoIIIE,Ftsk_gamma
PHALIAPI_02833	224308.BSU29820	1.78e-140	397.0	COG0073@1|root,COG0073@2|Bacteria,1V3R1@1239|Firmicutes,4HHBI@91061|Bacilli,1ZD7F@1386|Bacillus	91061|Bacilli	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	ytpR	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	-	ko:K06878	-	-	-	-	ko00000	-	-	-	DUF4479,tRNA_bind
PHALIAPI_02834	224308.BSU29830	1.02e-191	532.0	COG4848@1|root,COG4848@2|Bacteria,1TTBU@1239|Firmicutes,4HAD1@91061|Bacilli,1ZBQ7@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0354 family	ytpQ	-	-	-	-	-	-	-	-	-	-	-	DUF1444
PHALIAPI_02835	224308.BSU29840	4.51e-75	224.0	COG0526@1|root,COG0526@2|Bacteria,1VAS6@1239|Firmicutes,4HKGM@91061|Bacilli,1ZHAS@1386|Bacillus	91061|Bacilli	CO	Thioredoxin	ytpP	GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748	-	-	-	-	-	-	-	-	-	-	Thioredoxin
PHALIAPI_02836	224308.BSU29850	7.02e-103	297.0	28NR0@1|root,2ZBQD@2|Bacteria,1V1Z5@1239|Firmicutes,4HGAG@91061|Bacilli,1ZE4G@1386|Bacillus	91061|Bacilli	S	Nucleoside 2-deoxyribosyltransferase YtoQ	ytoQ	-	-	-	-	-	-	-	-	-	-	-	Nuc_deoxyri_tr3
PHALIAPI_02837	224308.BSU29860	1.51e-260	713.0	COG1363@1|root,COG1363@2|Bacteria,1TNZT@1239|Firmicutes,4H9SM@91061|Bacilli,1ZAXE@1386|Bacillus	91061|Bacilli	G	COG1363 Cellulase M and related proteins	pepA	-	3.4.11.7	ko:K01261,ko:K01269	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M42
PHALIAPI_02838	224308.BSU29870	1.17e-67	205.0	COG5584@1|root,COG5584@2|Bacteria,1VEIQ@1239|Firmicutes,4HNS2@91061|Bacilli,1ZJ31@1386|Bacillus	91061|Bacilli	S	small secreted protein	ytzB	-	-	-	-	-	-	-	-	-	-	-	PepSY
PHALIAPI_02839	224308.BSU29880	0.0	1124.0	COG0281@1|root,COG0281@2|Bacteria,1TPJ3@1239|Firmicutes,4H9WR@91061|Bacilli,1ZD0I@1386|Bacillus	91061|Bacilli	C	Malate dehydrogenase	malS	GO:0003674,GO:0003824,GO:0004470,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006090,GO:0006108,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016614,GO:0016615,GO:0019752,GO:0032787,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071704	1.1.1.38	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	-	R00214	RC00105	ko00000,ko00001,ko01000	-	-	-	Malic_M,malic
PHALIAPI_02840	1051501.AYTL01000030_gene3056	1.06e-190	531.0	COG0491@1|root,COG0491@2|Bacteria,1TRED@1239|Firmicutes,4HAP2@91061|Bacilli,1ZAYX@1386|Bacillus	91061|Bacilli	S	COG0491 Zn-dependent hydrolases, including glyoxylases	ytnP	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
PHALIAPI_02841	224308.BSU29900	3.07e-156	437.0	COG0220@1|root,COG0220@2|Bacteria,1TQCA@1239|Firmicutes,4HC08@91061|Bacilli,1ZAP2@1386|Bacillus	91061|Bacilli	J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA	trmB	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234	2.1.1.33	ko:K03439	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Methyltransf_4
PHALIAPI_02842	224308.BSU29910	9.51e-61	186.0	2E43M@1|root,32YZY@2|Bacteria,1VAYB@1239|Firmicutes,4HM5I@91061|Bacilli,1ZQJD@1386|Bacillus	91061|Bacilli	S	YtzH-like protein	ytzH	-	-	-	-	-	-	-	-	-	-	-	YtzH
PHALIAPI_02843	1051501.AYTL01000030_gene3059	3.02e-192	533.0	COG0510@1|root,COG0510@2|Bacteria,1UMFY@1239|Firmicutes,4HBF9@91061|Bacilli,1ZC4H@1386|Bacillus	91061|Bacilli	M	Phosphotransferase	ytmP	-	-	-	-	-	-	-	-	-	-	-	APH
PHALIAPI_02844	224308.BSU29930	0.0	1431.0	COG1523@1|root,COG1523@2|Bacteria,1TP3M@1239|Firmicutes,4HBP5@91061|Bacilli,1ZC85@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 13 family	amyX	-	3.2.1.41	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	-	R02111	-	ko00000,ko00001,ko01000	-	CBM48,GH13	-	Alpha-amylase,CBM_48
PHALIAPI_02845	224308.BSU29940	2.22e-231	635.0	COG1597@1|root,COG1597@2|Bacteria,1TUH3@1239|Firmicutes,4IR1U@91061|Bacilli,1ZRQM@1386|Bacillus	91061|Bacilli	I	Diacylglycerol kinase catalytic domain	ytlR	-	-	-	-	-	-	-	-	-	-	-	DAGK_acc,DAGK_cat
PHALIAPI_02846	224308.BSU29950	1.41e-211	585.0	28NSI@1|root,2ZB4U@2|Bacteria,1UZ00@1239|Firmicutes,4HDBT@91061|Bacilli,1ZDNP@1386|Bacillus	91061|Bacilli	-	-	ytlQ	-	-	-	-	-	-	-	-	-	-	-	NERD
PHALIAPI_02847	224308.BSU29960	3.53e-129	367.0	COG1514@1|root,COG1514@2|Bacteria,1VCBK@1239|Firmicutes,4HM3V@91061|Bacilli,1ZHT8@1386|Bacillus	91061|Bacilli	J	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester	ytlP	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531	3.1.4.58	ko:K01975	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	LigT_PEase
PHALIAPI_02848	224308.BSU29970	1.22e-220	608.0	COG0031@1|root,COG0031@2|Bacteria,1TP30@1239|Firmicutes,4HAMU@91061|Bacilli,1ZC73@1386|Bacillus	91061|Bacilli	E	Belongs to the cysteine synthase cystathionine beta- synthase family	ytkP	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
PHALIAPI_02849	224308.BSU29980	0.0	922.0	COG0624@1|root,COG0624@2|Bacteria,1TPEG@1239|Firmicutes,4HC14@91061|Bacilli,1ZBI2@1386|Bacillus	91061|Bacilli	E	Dipeptidase	ytjP	-	3.5.1.18	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R02734	RC00064,RC00090	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20
PHALIAPI_02850	224308.BSU29990	1.73e-288	790.0	COG2252@1|root,COG2252@2|Bacteria,1TQC6@1239|Firmicutes,4HANG@91061|Bacilli,1ZDJJ@1386|Bacillus	91061|Bacilli	S	permease	pbuO	-	-	ko:K06901	-	-	-	-	ko00000,ko02000	2.A.1.40	-	-	Xan_ur_permease
PHALIAPI_02851	224308.BSU30000	7.09e-255	701.0	COG4473@1|root,COG4473@2|Bacteria,1V6RH@1239|Firmicutes,4HK0C@91061|Bacilli,1ZEVB@1386|Bacillus	91061|Bacilli	U	Bacterial ABC transporter protein EcsB	ythQ	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	EcsB
PHALIAPI_02852	224308.BSU30010	3.14e-165	462.0	COG1131@1|root,COG1131@2|Bacteria,1TQIH@1239|Firmicutes,4HA2B@91061|Bacilli,1ZC0G@1386|Bacillus	91061|Bacilli	V	ABC transporter	ythP	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_02853	224308.BSU30020	4.46e-46	148.0	COG1349@1|root,COG1349@2|Bacteria,1VG5N@1239|Firmicutes,4HNPQ@91061|Bacilli,1ZHT3@1386|Bacillus	91061|Bacilli	K	COG1349 Transcriptional regulators of sugar metabolism	ytzE	-	-	-	-	-	-	-	-	-	-	-	HTH_DeoR
PHALIAPI_02854	224308.BSU30035	1.68e-166	466.0	COG1187@1|root,COG1187@2|Bacteria,1TQZ2@1239|Firmicutes,4H9VU@91061|Bacilli,1ZCAM@1386|Bacillus	91061|Bacilli	J	Belongs to the pseudouridine synthase RsuA family	rsuA	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.19	ko:K06183	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
PHALIAPI_02855	224308.BSU30050	0.0	969.0	COG2244@1|root,COG2244@2|Bacteria,1TNYX@1239|Firmicutes,4H9RY@91061|Bacilli,1ZBR9@1386|Bacillus	91061|Bacilli	S	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid	ytgP	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03328	-	-	-	-	ko00000	2.A.66.2	-	-	Polysacc_synt,Polysacc_synt_C
PHALIAPI_02856	224308.BSU30060	8.15e-293	800.0	COG2081@1|root,COG2081@2|Bacteria,1TQ6E@1239|Firmicutes,4HAAT@91061|Bacilli,1ZAT3@1386|Bacillus	91061|Bacilli	S	HI0933-like protein	ytfP	-	-	ko:K07007	-	-	-	-	ko00000	-	-	-	HI0933_like
PHALIAPI_02857	224308.BSU30070	0.0	978.0	COG1292@1|root,COG1292@2|Bacteria,1TRS6@1239|Firmicutes,4HA7U@91061|Bacilli,1ZBRN@1386|Bacillus	91061|Bacilli	M	Belongs to the BCCT transporter (TC 2.A.15) family	opuD	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337	-	ko:K05020	-	-	-	-	ko00000,ko02000	2.A.15.1.1,2.A.15.1.11	-	iYO844.BSU30070	BCCT
PHALIAPI_02858	224308.BSU30080	2.14e-36	122.0	2EJ4P@1|root,33CVX@2|Bacteria,1VMH9@1239|Firmicutes,4HSGS@91061|Bacilli,1ZIVZ@1386|Bacillus	91061|Bacilli	S	Sporulation protein Cse60	yteV	-	-	-	-	-	-	-	-	-	-	-	Spore_Cse60
PHALIAPI_02859	224308.BSU30090	9.36e-151	424.0	COG5578@1|root,COG5578@2|Bacteria,1V69Y@1239|Firmicutes,4HH89@91061|Bacilli,1ZGMC@1386|Bacillus	91061|Bacilli	S	Integral membrane protein	yteU	-	-	-	-	-	-	-	-	-	-	-	DUF624
PHALIAPI_02860	224308.BSU30100	0.0	885.0	COG0673@1|root,COG0673@2|Bacteria,1TSUT@1239|Firmicutes,4HDBM@91061|Bacilli,1ZD0S@1386|Bacillus	91061|Bacilli	S	Oxidoreductase family, C-terminal alpha/beta domain	yteT	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
PHALIAPI_02861	224308.BSU30110	2.76e-93	273.0	COG1653@1|root,COG1653@2|Bacteria,1U9I7@1239|Firmicutes,4IJNU@91061|Bacilli,1ZCI0@1386|Bacillus	91061|Bacilli	G	transport	yteS	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02862	224308.BSU30120	3.52e-280	764.0	COG4225@1|root,COG4225@2|Bacteria,1TRJ7@1239|Firmicutes,4HDRZ@91061|Bacilli,1ZCCP@1386|Bacillus	91061|Bacilli	G	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins	yteR	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.2.1.172	ko:K15532	-	-	-	-	ko00000,ko01000	-	GH105	-	Glyco_hydro_88
PHALIAPI_02863	224308.BSU30135	1.87e-220	609.0	COG4209@1|root,COG4209@2|Bacteria,1TP33@1239|Firmicutes,4HATZ@91061|Bacilli,1ZAQ3@1386|Bacillus	91061|Bacilli	G	COG4209 ABC-type polysaccharide transport system, permease component	lplB13	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K17319	ko02010,map02010	M00603	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.29,3.A.1.1.9	-	-	BPD_transp_1
PHALIAPI_02864	224308.BSU30150	0.0	1493.0	COG2207@1|root,COG2207@2|Bacteria,1UY4J@1239|Firmicutes,4HE0E@91061|Bacilli,1ZCUV@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ytdP	GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009438,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019243,GO:0019249,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0051596,GO:0061727,GO:0071704,GO:0072330,GO:1901575,GO:1901576,GO:1901615,GO:1901617	-	-	-	-	-	-	-	-	-	-	HTH_18,dCache_1
PHALIAPI_02865	224308.BSU30160	0.0	988.0	COG1653@1|root,COG1653@2|Bacteria,1TRD0@1239|Firmicutes,4HTV1@91061|Bacilli,1ZQXP@1386|Bacillus	91061|Bacilli	G	COG1653 ABC-type sugar transport system, periplasmic component	-	-	-	ko:K17318	ko02010,map02010	M00603	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.29,3.A.1.1.9	-	-	SBP_bac_1,SBP_bac_8
PHALIAPI_02866	1051501.AYTL01000030_gene3082	1.02e-191	534.0	COG0395@1|root,COG0395@2|Bacteria,1TQ9F@1239|Firmicutes,4HBG3@91061|Bacilli,1ZCUS@1386|Bacillus	91061|Bacilli	G	COG0395 ABC-type sugar transport system, permease component	ytcP	-	-	ko:K17320	ko02010,map02010	M00603	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.29,3.A.1.1.9	-	-	BPD_transp_1
PHALIAPI_02867	224308.BSU30180	2.21e-178	497.0	COG0451@1|root,COG0451@2|Bacteria,1V0AK@1239|Firmicutes,4HQJU@91061|Bacilli,1ZEQA@1386|Bacillus	91061|Bacilli	GM	NAD dependent epimerase/dehydratase family	ytbQ	-	1.1.1.203,1.1.1.388	ko:K18981,ko:K19243	ko00030,ko00053,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00053,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R10520,R10841,R10907	RC00066	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
PHALIAPI_02868	224308.BSU30190	1.1e-279	765.0	COG2124@1|root,COG2124@2|Bacteria,1TPWZ@1239|Firmicutes,4HAGS@91061|Bacilli,1ZC1Y@1386|Bacillus	91061|Bacilli	C	Cytochrome P450	bioI	GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005506,GO:0006066,GO:0006082,GO:0006629,GO:0006706,GO:0006707,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008395,GO:0009056,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016042,GO:0016053,GO:0016125,GO:0016127,GO:0016491,GO:0016705,GO:0016709,GO:0016713,GO:0017144,GO:0018130,GO:0019752,GO:0020037,GO:0032787,GO:0034641,GO:0036199,GO:0042364,GO:0042440,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0046148,GO:0046164,GO:0046394,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1902652	1.14.14.46,1.14.15.13	ko:K15468,ko:K16593,ko:K17474	ko00780,ko01100,map00780,map01100	M00573	R10123	-	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	-	-	-	p450
PHALIAPI_02869	224308.BSU30200	1.78e-241	663.0	COG0502@1|root,COG0502@2|Bacteria,1TPQ4@1239|Firmicutes,4HAGM@91061|Bacilli,1ZCAU@1386|Bacillus	91061|Bacilli	H	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism	bioB	-	2.8.1.6	ko:K01012	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R01078	RC00441	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU30200	BATS,Radical_SAM
PHALIAPI_02870	224308.BSU30210	1.55e-158	445.0	COG0132@1|root,COG0132@2|Bacteria,1V7IE@1239|Firmicutes,4IRD4@91061|Bacilli,1ZRTE@1386|Bacillus	91061|Bacilli	H	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring	bioD	GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.3.3	ko:K01935	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03182	RC00868	ko00000,ko00001,ko00002,ko01000	-	-	-	AAA_26
PHALIAPI_02871	224308.BSU30220	2.58e-275	753.0	COG0156@1|root,COG0156@2|Bacteria,1TPUX@1239|Firmicutes,4HAH3@91061|Bacilli,1ZAUZ@1386|Bacillus	91061|Bacilli	H	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide	bioF	GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	2.3.1.29,2.3.1.47	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	M00123,M00573,M00577	R00371,R03210,R10124	RC00004,RC00039,RC00394,RC02725	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	iSB619.SA_RS12695	Aminotran_1_2
PHALIAPI_02872	224308.BSU30230	0.0	895.0	COG0161@1|root,COG0161@2|Bacteria,1TP9N@1239|Firmicutes,4H9QK@91061|Bacilli,1ZR67@1386|Bacillus	91061|Bacilli	H	Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor	bioA	-	2.6.1.105,2.6.1.62	ko:K00833,ko:K19563	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03231,R10699	RC00006,RC00062,RC00887	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	iSB619.SA_RS12705	Aminotran_3
PHALIAPI_02873	224308.BSU30240	7.82e-180	500.0	COG1424@1|root,COG1424@2|Bacteria,1V38Y@1239|Firmicutes,4HJME@91061|Bacilli,1ZEA6@1386|Bacillus	91061|Bacilli	H	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP	bioW	-	6.2.1.14	ko:K01906	ko00780,ko01100,map00780,map01100	M00577	R03209	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	BioW
PHALIAPI_02874	224308.BSU30250	9.68e-221	608.0	COG1073@1|root,COG1073@2|Bacteria,1UYH0@1239|Firmicutes,4HE35@91061|Bacilli,1ZQKV@1386|Bacillus	91061|Bacilli	S	Acetyl xylan esterase (AXE1)	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02875	224308.BSU30260	6.21e-242	665.0	COG1609@1|root,COG1609@2|Bacteria,1TPZJ@1239|Firmicutes,4HC9Z@91061|Bacilli,1ZD8J@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	msmR	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
PHALIAPI_02876	224308.BSU30270	8.26e-309	841.0	COG1653@1|root,COG1653@2|Bacteria,1TQHT@1239|Firmicutes,4HAH2@91061|Bacilli,1ZD76@1386|Bacillus	91061|Bacilli	G	Bacterial extracellular solute-binding protein	msmE	-	-	ko:K10117	ko02010,map02010	M00196	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.28	-	-	SBP_bac_1,SBP_bac_8
PHALIAPI_02877	224308.BSU30280	1.66e-214	592.0	COG1175@1|root,COG1175@2|Bacteria,1TRA3@1239|Firmicutes,4HEA0@91061|Bacilli,1ZQ7U@1386|Bacillus	91061|Bacilli	P	ABC transporter	amyD	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	ko:K10118	ko02010,map02010	M00196	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.28	-	-	BPD_transp_1
PHALIAPI_02878	224308.BSU30290	5.16e-184	513.0	COG0395@1|root,COG0395@2|Bacteria,1TR8M@1239|Firmicutes,4HAKX@91061|Bacilli,1ZQ4Y@1386|Bacillus	91061|Bacilli	P	ABC transporter (permease)	amyC	-	-	ko:K10119	ko02010,map02010	M00196	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.28	-	-	BPD_transp_1
PHALIAPI_02879	224308.BSU30300	0.0	875.0	COG1486@1|root,COG1486@2|Bacteria,1TQ9I@1239|Firmicutes,4HCGH@91061|Bacilli,1ZQT1@1386|Bacillus	91061|Bacilli	G	Family 4 glycosyl hydrolase	melA	-	3.2.1.22	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	-	R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091	RC00049,RC00059,RC00451	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_4,Glyco_hydro_4C
PHALIAPI_02880	224308.BSU30310	1.22e-68	207.0	COG0607@1|root,COG0607@2|Bacteria,1VES3@1239|Firmicutes,4HNRE@91061|Bacilli,1ZH5X@1386|Bacillus	91061|Bacilli	P	Sulfurtransferase	ytwF	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
PHALIAPI_02881	224308.BSU30320	0.0	1655.0	COG0495@1|root,COG0495@2|Bacteria,1TP0Y@1239|Firmicutes,4HAG1@91061|Bacilli,1ZARG@1386|Bacillus	91061|Bacilli	J	Belongs to the class-I aminoacyl-tRNA synthetase family	leuS	GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Anticodon_1,tRNA-synt_1,tRNA-synt_1_2
PHALIAPI_02882	1051501.AYTL01000030_gene3098	3.63e-72	217.0	28XZV@1|root,2ZJVM@2|Bacteria,1W4DK@1239|Firmicutes,4I02G@91061|Bacilli	91061|Bacilli	S	Protein of unknown function (DUF4257)	ytvB	-	-	-	-	-	-	-	-	-	-	-	DUF4257
PHALIAPI_02883	224308.BSU30340	1.49e-180	503.0	COG1366@1|root,COG2202@1|root,COG1366@2|Bacteria,COG2202@2|Bacteria,1V4PP@1239|Firmicutes,4HER6@91061|Bacilli,1ZE0R@1386|Bacillus	91061|Bacilli	T	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)	pfyP	GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564	-	-	-	-	-	-	-	-	-	-	PAS_9,STAS
PHALIAPI_02884	224308.BSU30350	1.41e-267	734.0	COG0477@1|root,COG2814@2|Bacteria,1TPJ6@1239|Firmicutes,4HAGJ@91061|Bacilli,1ZBPE@1386|Bacillus	91061|Bacilli	EGP	Major facilitator superfamily	yttB	-	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_02885	224308.BSU30360	1.08e-75	236.0	COG2433@1|root,COG2433@2|Bacteria,1VFAN@1239|Firmicutes,4HQ1M@91061|Bacilli,1ZDUX@1386|Bacillus	91061|Bacilli	S	Pfam Transposase IS66	yttA	-	-	-	-	-	-	-	-	-	-	-	LMBR1
PHALIAPI_02886	224308.BSU30370	0.0	1180.0	COG0577@1|root,COG0577@2|Bacteria,1TR2D@1239|Firmicutes,4H9SH@91061|Bacilli,1ZBJC@1386|Bacillus	91061|Bacilli	V	ABC transporter (permease)	bceB	-	-	ko:K11632,ko:K19080	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	M00314,M00730,M00732,M00737,M00738	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	3.A.1.134.3,3.A.1.134.7	-	-	FtsX
PHALIAPI_02887	224308.BSU30380	3.83e-179	499.0	COG1136@1|root,COG1136@2|Bacteria,1TNZG@1239|Firmicutes,4H9UT@91061|Bacilli,1ZCDW@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	bceA	-	-	ko:K02003,ko:K11631,ko:K19079	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	M00258,M00314,M00730,M00732,M00737,M00738	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	3.A.1,3.A.1.134.3,3.A.1.134.7	-	-	ABC_tran
PHALIAPI_02888	224308.BSU30390	3.06e-237	652.0	COG0642@1|root,COG2205@2|Bacteria,1TSIC@1239|Firmicutes,4HC32@91061|Bacilli,1ZS7P@1386|Bacillus	91061|Bacilli	T	His Kinase A (phosphoacceptor) domain	bceS	-	2.7.13.3	ko:K11629,ko:K19077	ko01503,ko02020,map01503,map02020	M00469,M00725,M00726,M00730,M00733,M00738	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	-	-	-	HATPase_c
PHALIAPI_02889	224308.BSU30400	2.23e-167	467.0	COG0745@1|root,COG0745@2|Bacteria,1TR32@1239|Firmicutes,4HAUJ@91061|Bacilli,1ZCP0@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	graR	-	-	ko:K11630,ko:K19078	ko01503,ko02020,map01503,map02020	M00469,M00725,M00726,M00730,M00733,M00738	-	-	ko00000,ko00001,ko00002,ko01504,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_02890	224308.BSU30410	9.81e-297	811.0	COG0577@1|root,COG0577@2|Bacteria,1TPUU@1239|Firmicutes,4HDKX@91061|Bacilli,1ZE27@1386|Bacillus	91061|Bacilli	V	COG0577 ABC-type antimicrobial peptide transport system, permease component	ytrF	-	-	ko:K02004,ko:K16918	ko02010,map02010	M00258,M00584	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
PHALIAPI_02891	224308.BSU30420	1.02e-163	458.0	COG1136@1|root,COG1136@2|Bacteria,1TPBJ@1239|Firmicutes,4HCWT@91061|Bacilli,1ZPYX@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	ytrE	-	-	ko:K16920	ko02010,map02010	M00584	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_02892	720555.BATR1942_12985	7.89e-192	537.0	28RDX@1|root,2ZDT6@2|Bacteria,1W1HD@1239|Firmicutes,4I0VX@91061|Bacilli	91061|Bacilli	-	-	-	-	-	ko:K16919	ko02010,map02010	M00584	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_5
PHALIAPI_02893	224308.BSU30440	4.18e-216	598.0	2EWYB@1|root,33Q9P@2|Bacteria,1VRDR@1239|Firmicutes,4HT25@91061|Bacilli,1ZS7Q@1386|Bacillus	91061|Bacilli	P	ABC-2 family transporter protein	-	-	-	ko:K16919	ko02010,map02010	M00584	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1	-	-	-
PHALIAPI_02894	224308.BSU30450	1.03e-207	574.0	COG1131@1|root,COG1131@2|Bacteria,1VYEA@1239|Firmicutes,4HXN2@91061|Bacilli,1ZPYY@1386|Bacillus	91061|Bacilli	P	ABC transporter, ATP-binding protein	ytrB	-	-	ko:K16921	ko02010,map02010	M00584	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_02895	224308.BSU30460	2.68e-87	256.0	COG1725@1|root,COG1725@2|Bacteria,1VFD0@1239|Firmicutes,4HNIT@91061|Bacilli,1ZGQV@1386|Bacillus	91061|Bacilli	K	GntR family transcriptional regulator	ytrA	-	-	ko:K07979	-	-	-	-	ko00000,ko03000	-	-	-	GntR
PHALIAPI_02897	224308.BSU30470	1.27e-55	173.0	29JW2@1|root,306TD@2|Bacteria,1U0BH@1239|Firmicutes,4I9NA@91061|Bacilli,1ZISQ@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2524)	ytzC	-	-	-	-	-	-	-	-	-	-	-	DUF2524
PHALIAPI_02898	224308.BSU30480	9.56e-244	668.0	COG1242@1|root,COG1242@2|Bacteria,1TQ57@1239|Firmicutes,4H9N8@91061|Bacilli,1ZBM1@1386|Bacillus	91061|Bacilli	S	Fe-S oxidoreductase	ytqA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K07139	-	-	-	-	ko00000	-	-	-	Radical_SAM,Radical_SAM_C
PHALIAPI_02899	224308.BSU30490	2.75e-136	385.0	COG2519@1|root,COG2519@2|Bacteria,1V6VU@1239|Firmicutes,4ISFT@91061|Bacilli,1ZS5P@1386|Bacillus	91061|Bacilli	J	Putative rRNA methylase	ytqB	-	-	-	-	-	-	-	-	-	-	-	rRNA_methylase
PHALIAPI_02900	224308.BSU30500	4.61e-274	748.0	2C5HJ@1|root,2Z812@2|Bacteria,1TQQ6@1239|Firmicutes,4HA3F@91061|Bacilli,1ZCGB@1386|Bacillus	91061|Bacilli	S	Tetraprenyl-beta-curcumene synthase	ytpB	-	4.2.3.130	ko:K16188	-	-	R10009	RC02994	ko00000,ko01000	-	-	-	DUF2600
PHALIAPI_02901	224308.BSU30510	2.33e-192	533.0	COG2267@1|root,COG2267@2|Bacteria,1UZ5S@1239|Firmicutes,4HEHP@91061|Bacilli,1ZBD1@1386|Bacillus	91061|Bacilli	I	Alpha beta hydrolase	ytpA	GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0008150,GO:0008152,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0044238,GO:0071704	3.1.1.5	ko:K01048	ko00564,map00564	-	-	-	ko00000,ko00001,ko01000	-	-	-	Hydrolase_4
PHALIAPI_02902	224308.BSU30520	8.35e-88	261.0	COG0663@1|root,COG0663@2|Bacteria,1V6CZ@1239|Firmicutes,4HFPC@91061|Bacilli,1ZBFS@1386|Bacillus	91061|Bacilli	S	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily	ytoA	-	-	-	-	-	-	-	-	-	-	-	Hexapep
PHALIAPI_02903	224308.BSU30530	0.0	893.0	COG1113@1|root,COG1113@2|Bacteria,1TP97@1239|Firmicutes,4H9QX@91061|Bacilli,1ZAQB@1386|Bacillus	91061|Bacilli	E	COG1113 Gamma-aminobutyrate permease and related permeases	ytnA	-	-	ko:K03293	-	-	-	-	ko00000	2.A.3.1	-	-	AA_permease
PHALIAPI_02904	224308.BSU30540	0.0	1285.0	COG0367@1|root,COG0367@2|Bacteria,1TRPB@1239|Firmicutes,4HAIP@91061|Bacilli,1ZAPW@1386|Bacillus	91061|Bacilli	E	Asparagine synthase	asnB	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
PHALIAPI_02905	224308.BSU30550	2.26e-286	782.0	COG0192@1|root,COG0192@2|Bacteria,1TPCV@1239|Firmicutes,4HB33@91061|Bacilli,1ZBHR@1386|Bacillus	91061|Bacilli	H	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme	metK	GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464	2.5.1.6	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	M00034,M00035,M00368,M00609	R00177,R04771	RC00021,RC01211	ko00000,ko00001,ko00002,ko01000	-	-	-	S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N
PHALIAPI_02906	224308.BSU30560	0.0	1067.0	COG1866@1|root,COG1866@2|Bacteria,1TPQV@1239|Firmicutes,4HAKG@91061|Bacilli,1ZCVN@1386|Bacillus	91061|Bacilli	C	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA	pckA	GO:0000166,GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019318,GO:0019319,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576	4.1.1.49	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00170	R00341	RC00002,RC02741	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS09060,iYO844.BSU30560	PEPCK_ATP
PHALIAPI_02907	224308.BSU30570	2.85e-52	164.0	2EA0D@1|root,32SFQ@2|Bacteria,1VJ7K@1239|Firmicutes,4HPZ6@91061|Bacilli,1ZR94@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2584)	ytmB	-	-	-	-	-	-	-	-	-	-	-	DUF2584
PHALIAPI_02908	224308.BSU30580	6.67e-191	529.0	COG1506@1|root,COG1506@2|Bacteria,1U5SB@1239|Firmicutes,4HB1A@91061|Bacilli,1ZC9W@1386|Bacillus	91061|Bacilli	E	COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases	ytmA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S9
PHALIAPI_02909	224308.BSU30595	2.66e-240	660.0	COG0715@1|root,COG0715@2|Bacteria,1TQN5@1239|Firmicutes,4HAB9@91061|Bacilli,1ZC0Z@1386|Bacillus	91061|Bacilli	P	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components	ytlA	GO:0003674,GO:0005215	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1,NMT1_2
PHALIAPI_02910	224308.BSU30610	1.5e-184	513.0	COG1116@1|root,COG1116@2|Bacteria,1TRM6@1239|Firmicutes,4HBZ6@91061|Bacilli,1ZC33@1386|Bacillus	91061|Bacilli	P	ABC transporter	ytlC	-	3.6.3.36	ko:K02049,ko:K10831,ko:K15555	ko00920,ko02010,map00920,map02010	M00188,M00435,M00436	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.16,3.A.1.17,3.A.1.17.1,3.A.1.17.2,3.A.1.17.4	-	-	ABC_tran
PHALIAPI_02911	224308.BSU30620	5.39e-183	510.0	COG0600@1|root,COG0600@2|Bacteria,1TR6A@1239|Firmicutes,4HARB@91061|Bacilli,1ZD96@1386|Bacillus	91061|Bacilli	P	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component	ytlD	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
PHALIAPI_02912	224308.BSU30630	4.47e-113	324.0	COG0494@1|root,COG0494@2|Bacteria,1V42H@1239|Firmicutes,4HH5W@91061|Bacilli,1ZGYP@1386|Bacillus	91061|Bacilli	L	Belongs to the Nudix hydrolase family	ytkD	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NUDIX
PHALIAPI_02913	224308.BSU30640	1.52e-79	237.0	COG4824@1|root,COG4824@2|Bacteria,1UA5F@1239|Firmicutes,4IKFX@91061|Bacilli,1ZGWK@1386|Bacillus	91061|Bacilli	S	Bacteriophage holin family	ytkC	-	-	-	-	-	-	-	-	-	-	-	Phage_holin_4_1
PHALIAPI_02914	224308.BSU30650	1.8e-99	288.0	COG0783@1|root,COG0783@2|Bacteria,1VCVJ@1239|Firmicutes,4HMBD@91061|Bacilli,1ZGCM@1386|Bacillus	91061|Bacilli	P	Belongs to the Dps family	dps	GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
PHALIAPI_02916	224308.BSU30660	1.6e-93	273.0	28PM4@1|root,2ZCA8@2|Bacteria,1V1PA@1239|Firmicutes,4HFNN@91061|Bacilli,1ZG8T@1386|Bacillus	91061|Bacilli	S	YtkA-like	ytkA	-	-	-	-	-	-	-	-	-	-	-	PKD,YtkA
PHALIAPI_02917	224308.BSU30670	8.36e-113	323.0	COG1854@1|root,COG1854@2|Bacteria,1V1CH@1239|Firmicutes,4HFPR@91061|Bacilli,1ZBSW@1386|Bacillus	91061|Bacilli	T	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)	luxS	GO:0008150,GO:0043900,GO:0043901,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0065007,GO:1900190,GO:1900191,GO:1900231,GO:1900232	4.4.1.21	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	M00609	R01291	RC00069,RC01929	ko00000,ko00001,ko00002,ko01000	-	-	-	LuxS
PHALIAPI_02918	224308.BSU30690	1.27e-133	378.0	COG0288@1|root,COG0288@2|Bacteria,1V1EC@1239|Firmicutes,4HFQA@91061|Bacilli,1ZB5T@1386|Bacillus	91061|Bacilli	P	Reversible hydration of carbon dioxide	ytiB	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
PHALIAPI_02919	224308.BSU30700	2.05e-55	172.0	COG0254@1|root,COG0254@2|Bacteria,1VEGU@1239|Firmicutes,4HKF0@91061|Bacilli,1ZHX3@1386|Bacillus	91061|Bacilli	J	Ribosomal protein L31	rpmE2	-	-	ko:K02909	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L31
PHALIAPI_02920	224308.BSU30710	1.03e-315	860.0	COG1271@1|root,COG1271@2|Bacteria,1TRH4@1239|Firmicutes,4HA19@91061|Bacilli,1ZBAG@1386|Bacillus	91061|Bacilli	C	oxidase, subunit	ythA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
PHALIAPI_02921	224308.BSU30720	1.91e-237	654.0	COG1294@1|root,COG1294@2|Bacteria,1TPYX@1239|Firmicutes,4HA9T@91061|Bacilli,1ZCH6@1386|Bacillus	91061|Bacilli	C	COG1294 Cytochrome bd-type quinol oxidase, subunit 2	ythB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
PHALIAPI_02922	224308.BSU30739	2.43e-34	117.0	2E3H2@1|root,32YFR@2|Bacteria,1VF0S@1239|Firmicutes,4HNTB@91061|Bacilli,1ZJ4H@1386|Bacillus	91061|Bacilli	S	Domain of Unknown Function (DUF1540)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1540
PHALIAPI_02923	224308.BSU30740	2.53e-189	528.0	COG1108@1|root,COG1108@2|Bacteria,1TPZB@1239|Firmicutes,4HBD7@91061|Bacilli,1ZAY6@1386|Bacillus	91061|Bacilli	P	'COG1108 ABC-type Mn2 Zn2 transport systems, permease components'	mntD	GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944	-	ko:K11709,ko:K19976	ko02010,map02010	M00319,M00792	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15,3.A.1.15.15	-	-	ABC-3
PHALIAPI_02924	224308.BSU30750	9.07e-297	811.0	COG1108@1|root,COG1321@1|root,COG1108@2|Bacteria,COG1321@2|Bacteria,1TPZB@1239|Firmicutes,4HCDH@91061|Bacilli,1ZDBC@1386|Bacillus	91061|Bacilli	P	COG1108 ABC-type Mn2 Zn2 transport systems, permease components	mntC	GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944	-	ko:K11705,ko:K11708,ko:K19976	ko02010,map02010	M00318,M00319,M00792	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15,3.A.1.15.15,3.A.1.15.6	-	-	ABC-3
PHALIAPI_02925	224308.BSU30760	8.01e-175	488.0	COG1121@1|root,COG1121@2|Bacteria,1TQJ3@1239|Firmicutes,4HA2W@91061|Bacilli,1ZC67@1386|Bacillus	91061|Bacilli	P	'COG1121 ABC-type Mn Zn transport systems, ATPase component'	mntB	-	3.6.3.35	ko:K02074,ko:K09820,ko:K11710,ko:K19973	ko02010,map02010	M00243,M00244,M00319,M00792	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.15,3.A.1.15.15	-	iYO844.BSU30760	ABC_tran
PHALIAPI_02926	224308.BSU30770	1.08e-216	598.0	COG0803@1|root,COG0803@2|Bacteria,1TRKU@1239|Firmicutes,4HAKT@91061|Bacilli,1ZC5F@1386|Bacillus	91061|Bacilli	P	Belongs to the bacterial solute-binding protein 9 family	troA	-	-	ko:K11707	ko02010,map02010	M00319	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15	-	-	ZnuA
PHALIAPI_02927	224308.BSU30780	9.63e-271	740.0	COG4948@1|root,COG4948@2|Bacteria,1TQMS@1239|Firmicutes,4HBMX@91061|Bacilli,1ZBMS@1386|Bacillus	91061|Bacilli	H	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)	menC	GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663	4.2.1.113	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R04031	RC01053	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU30780	MR_MLE_C,MR_MLE_N
PHALIAPI_02928	224308.BSU30790	0.0	941.0	COG0318@1|root,COG0318@2|Bacteria,1TPSX@1239|Firmicutes,4HACS@91061|Bacilli,1ZB6H@1386|Bacillus	91061|Bacilli	H	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily	menE	-	6.2.1.26	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R04030	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	AMP-binding,AMP-binding_C
PHALIAPI_02929	224308.BSU30800	3.45e-200	553.0	COG0447@1|root,COG0447@2|Bacteria,1UHNU@1239|Firmicutes,4HAD0@91061|Bacilli,1ZB3B@1386|Bacillus	91061|Bacilli	H	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)	menB	GO:0003674,GO:0003824,GO:0005488,GO:0006732,GO:0008150,GO:0008152,GO:0008935,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0042180,GO:0042181,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:0071890,GO:1901576,GO:1901661,GO:1901663	4.1.3.36	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R07263	RC01923	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
PHALIAPI_02930	224308.BSU30810	9.85e-197	545.0	COG0596@1|root,COG0596@2|Bacteria,1TS4C@1239|Firmicutes,4HB6G@91061|Bacilli,1ZAU9@1386|Bacillus	91061|Bacilli	S	Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)	menH	GO:0003674,GO:0003824,GO:0016787	4.2.99.20	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R08166	RC02148,RC02475	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_1
PHALIAPI_02931	224308.BSU30820	0.0	1164.0	COG1165@1|root,COG1165@2|Bacteria,1TRDB@1239|Firmicutes,4HC48@91061|Bacilli,1ZANU@1386|Bacillus	91061|Bacilli	H	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)	menD	-	2.2.1.9	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R08165	RC02186	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS05085	TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N
PHALIAPI_02932	224308.BSU30830	0.0	942.0	COG1169@1|root,COG1169@2|Bacteria,1TSRT@1239|Firmicutes,4H9K8@91061|Bacilli,1ZB3V@1386|Bacillus	91061|Bacilli	HQ	Isochorismate synthase	menF	GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663	5.4.4.2	ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	M00116	R01717	RC00588	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU30830	Chorismate_bind
PHALIAPI_02933	224308.BSU30840	8.68e-169	471.0	COG1734@1|root,COG1734@2|Bacteria,1V6MF@1239|Firmicutes,4HEPK@91061|Bacilli,1ZEEI@1386|Bacillus	91061|Bacilli	T	COG1734 DnaK suppressor protein	yteA	-	-	-	-	-	-	-	-	-	-	-	zf-dskA_traR
PHALIAPI_02934	224308.BSU30850	1.91e-193	536.0	COG1210@1|root,COG1210@2|Bacteria,1VRS2@1239|Firmicutes,4HUKI@91061|Bacilli,1ZCZA@1386|Bacillus	91061|Bacilli	M	Nucleotidyl transferase	ytdA	-	2.7.7.9	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	M00129,M00361,M00362,M00549	R00289	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
PHALIAPI_02935	224308.BSU30860	2.77e-308	840.0	COG1004@1|root,COG1004@2|Bacteria,1TQFN@1239|Firmicutes,4HADP@91061|Bacilli,1ZAP3@1386|Bacillus	91061|Bacilli	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	ytcA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
PHALIAPI_02936	224308.BSU30870	6.1e-228	627.0	COG0451@1|root,COG0451@2|Bacteria,1VP6I@1239|Firmicutes,4HAN7@91061|Bacilli,1ZQ48@1386|Bacillus	91061|Bacilli	M	NAD-dependent epimerase dehydratase	ytcB	-	-	-	-	-	-	-	-	-	-	-	Epimerase,GDP_Man_Dehyd
PHALIAPI_02937	224308.BSU30880	2.91e-297	810.0	COG0438@1|root,COG0438@2|Bacteria,1TSGH@1239|Firmicutes,4HDGK@91061|Bacilli,1ZPVP@1386|Bacillus	91061|Bacilli	M	Glycosyltransferase Family 4	-	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	ko:K06338	-	-	-	-	ko00000	-	-	-	Glyco_transf_4,Glycos_transf_1
PHALIAPI_02939	224308.BSU30900	2.71e-260	712.0	COG2334@1|root,COG2334@2|Bacteria,1V035@1239|Firmicutes,4HEX5@91061|Bacilli,1ZBJZ@1386|Bacillus	91061|Bacilli	S	Seems to be required for the assembly of the CotSA protein in spores	cotS	-	-	ko:K06337	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_02940	224308.BSU30910	5.85e-275	751.0	COG0438@1|root,COG0438@2|Bacteria,1TRRW@1239|Firmicutes,4HAFA@91061|Bacilli,1ZCKJ@1386|Bacillus	91061|Bacilli	M	Glycosyl transferases group 1	cotSA	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	ko:K06338	-	-	-	-	ko00000	-	-	-	Glyco_transf_4,Glycos_transf_1
PHALIAPI_02941	224308.BSU30920	1.5e-259	711.0	COG2334@1|root,COG2334@2|Bacteria,1V12T@1239|Firmicutes,4IPYD@91061|Bacilli,1ZREV@1386|Bacillus	91061|Bacilli	S	Spore coat protein	cotI	-	-	ko:K06331	-	-	-	-	ko00000	-	-	-	APH
PHALIAPI_02942	224308.BSU30930	1.97e-101	294.0	COG3476@1|root,COG3476@2|Bacteria,1VDNQ@1239|Firmicutes,4IRXH@91061|Bacilli,1ZHKT@1386|Bacillus	91061|Bacilli	T	membrane	ytaB	-	-	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	-	-	-	ko00000,ko00001,ko02000	9.A.24	-	-	TspO_MBR
PHALIAPI_02943	224308.BSU30940	0.0	1605.0	COG0058@1|root,COG0058@2|Bacteria,1TQAJ@1239|Firmicutes,4H9XI@91061|Bacilli,1ZCRF@1386|Bacillus	91061|Bacilli	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties	glgP	GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575	2.4.1.1	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R02111	-	ko00000,ko00001,ko01000	-	GT35	iYO844.BSU30940	Phosphorylase
PHALIAPI_02944	224308.BSU30950	0.0	971.0	COG0297@1|root,COG0297@2|Bacteria,1TQ4M@1239|Firmicutes,4HAVA@91061|Bacilli,1ZDBA@1386|Bacillus	91061|Bacilli	G	Synthesizes alpha-1,4-glucan chains using ADP-glucose	glgA	GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046527,GO:0055114,GO:0071704,GO:1901576	2.4.1.21	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	M00565	R02421	RC00005	ko00000,ko00001,ko00002,ko01000,ko01003	-	GT5	-	Glyco_transf_5,Glycos_transf_1
PHALIAPI_02945	224308.BSU30960	1.58e-239	659.0	COG0448@1|root,COG0448@2|Bacteria,1TPZ3@1239|Firmicutes,4H9UQ@91061|Bacilli,1ZBVM@1386|Bacillus	91061|Bacilli	G	Glucose-1-phosphate adenylyltransferase, GlgD subunit	glgD	-	2.7.7.27	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	M00565	R00948	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,NTP_transferase
PHALIAPI_02946	224308.BSU30970	8.49e-265	726.0	COG0448@1|root,COG0448@2|Bacteria,1TNZW@1239|Firmicutes,4HAZX@91061|Bacilli,1ZCF2@1386|Bacillus	91061|Bacilli	G	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans	glgC	GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008878,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0070566,GO:0071704,GO:1901576	2.7.7.27	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	M00565	R00948	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,NTP_transferase
PHALIAPI_02947	224308.BSU30980	0.0	1333.0	COG0296@1|root,COG0296@2|Bacteria,1TP4M@1239|Firmicutes,4HAPM@91061|Bacilli,1ZCHU@1386|Bacillus	91061|Bacilli	G	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position	glgB	GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576	2.4.1.18	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02110	-	ko00000,ko00001,ko00002,ko01000,ko04147	-	CBM48,GH13	-	Alpha-amylase,Alpha-amylase_C,CBM_48
PHALIAPI_02969	1051501.AYTL01000008_gene1340	1.13e-53	168.0	2DMNG@1|root,32SP1@2|Bacteria,1VAXC@1239|Firmicutes,4HM1Q@91061|Bacilli,1ZI92@1386|Bacillus	91061|Bacilli	S	COG NOG14552 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02970	224308.BSU30990	3.58e-122	350.0	COG3859@1|root,COG3859@2|Bacteria,1V1WX@1239|Firmicutes,4HFZJ@91061|Bacilli,1ZR59@1386|Bacillus	91061|Bacilli	S	Thiamine transporter protein (Thia_YuaJ)	thiT	-	-	ko:K16789	-	-	-	-	ko00000,ko02000	2.A.88.3	-	-	Thia_YuaJ
PHALIAPI_02971	224308.BSU31000	1e-33	119.0	COG1247@1|root,COG1247@2|Bacteria,1VAAC@1239|Firmicutes,4HKUR@91061|Bacilli,1ZHWJ@1386|Bacillus	91061|Bacilli	M	FR47-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,FR47
PHALIAPI_02972	224308.BSU31000	4.9e-63	195.0	COG1247@1|root,COG1247@2|Bacteria,1VAAC@1239|Firmicutes,4HKUR@91061|Bacilli,1ZHWJ@1386|Bacillus	91061|Bacilli	M	FR47-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,FR47
PHALIAPI_02973	224308.BSU31010	4.54e-258	720.0	COG2268@1|root,COG2268@2|Bacteria,1TQDT@1239|Firmicutes,4HA0C@91061|Bacilli,1ZBTE@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yuaG	-	-	ko:K07192	ko04910,map04910	-	-	-	ko00000,ko00001,ko03036,ko04131,ko04147	-	-	-	Band_7,Flot
PHALIAPI_02974	224308.BSU31020	5.63e-108	312.0	COG1585@1|root,COG1585@2|Bacteria,1V4S8@1239|Firmicutes,4HHUI@91061|Bacilli,1ZGPJ@1386|Bacillus	91061|Bacilli	OU	Membrane protein implicated in regulation of membrane protease activity	yuaF	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02975	224308.BSU31030	1.95e-109	315.0	COG2318@1|root,COG2318@2|Bacteria,1V8A0@1239|Firmicutes,4HIW8@91061|Bacilli,1ZR7U@1386|Bacillus	91061|Bacilli	S	DinB superfamily	yuaE	-	-	-	-	-	-	-	-	-	-	-	DinB_2
PHALIAPI_02976	224308.BSU31040	1.66e-136	386.0	28NII@1|root,2ZBJY@2|Bacteria,1V8N9@1239|Firmicutes,4HVKD@91061|Bacilli,1ZHKN@1386|Bacillus	91061|Bacilli	-	-	yuaD	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02977	224308.BSU31050	2.88e-290	792.0	COG1454@1|root,COG1454@2|Bacteria,1TPB4@1239|Firmicutes,4HAPA@91061|Bacilli,1ZBBG@1386|Bacillus	91061|Bacilli	C	alcohol dehydrogenase	gbsB	GO:0003674,GO:0003824,GO:0004022,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.1.1.1	ko:K11440	ko00260,ko01100,map00260,map01100	M00555	R08557,R08558	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	Fe-ADH
PHALIAPI_02978	224308.BSU31060	0.0	971.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4H9MF@91061|Bacilli,1ZAY9@1386|Bacillus	91061|Bacilli	C	Belongs to the aldehyde dehydrogenase family	gbsA	-	1.2.1.8	ko:K00130	ko00260,ko01100,map00260,map01100	M00555	R02565,R02566	RC00080	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
PHALIAPI_02979	224308.BSU31070	1.38e-120	345.0	COG1510@1|root,COG1510@2|Bacteria,1V3E5@1239|Firmicutes,4HIEJ@91061|Bacilli,1ZGAI@1386|Bacillus	91061|Bacilli	K	Belongs to the GbsR family	yuaC	-	-	ko:K22109	-	-	-	-	ko00000,ko03000	-	-	-	-
PHALIAPI_02980	224308.BSU31080	5.83e-118	338.0	2974U@1|root,2ZUCW@2|Bacteria,1W4BH@1239|Firmicutes,4I1IR@91061|Bacilli,1ZFDP@1386|Bacillus	91061|Bacilli	-	-	yuaB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_02981	224308.BSU31090	1.06e-156	439.0	COG0569@1|root,COG0569@2|Bacteria,1TQ9H@1239|Firmicutes,4HBPH@91061|Bacilli,1ZC2N@1386|Bacillus	91061|Bacilli	P	COG0569 K transport systems, NAD-binding component	ktrA	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K03499	-	-	-	-	ko00000,ko02000	2.A.38.1,2.A.38.4	-	-	TrkA_C,TrkA_N
PHALIAPI_02982	224308.BSU31100	8.78e-300	820.0	COG0168@1|root,COG0168@2|Bacteria,1TQ4S@1239|Firmicutes,4H9ME@91061|Bacilli,1ZBJ9@1386|Bacillus	91061|Bacilli	P	Potassium	-	-	-	ko:K03498	-	-	-	-	ko00000,ko02000	2.A.38.1,2.A.38.4	-	-	TrkH
PHALIAPI_02983	224308.BSU31110	3.31e-52	164.0	COG4682@1|root,COG4682@2|Bacteria,1V29F@1239|Firmicutes,4HMJX@91061|Bacilli,1ZR9T@1386|Bacillus	91061|Bacilli	S	yiaA/B two helix domain	yubF	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033554,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0071944	-	-	-	-	-	-	-	-	-	-	YiaAB
PHALIAPI_02984	224308.BSU31120	4.49e-197	546.0	COG1705@1|root,COG1705@2|Bacteria,1V7JY@1239|Firmicutes,4HIY4@91061|Bacilli,1ZJU6@1386|Bacillus	91061|Bacilli	NU	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	-	-	-	-	-	-	-	-	-	-	-	-	Glucosaminidase,SH3_8
PHALIAPI_02985	224308.BSU31130	0.0	942.0	COG0477@1|root,COG0477@2|Bacteria,1UIMH@1239|Firmicutes,4ISNI@91061|Bacilli,1ZFGU@1386|Bacillus	91061|Bacilli	P	Major Facilitator Superfamily	yubD	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_02986	224308.BSU31140	3.25e-112	322.0	COG5553@1|root,COG5553@2|Bacteria,1VFPC@1239|Firmicutes,4HPUH@91061|Bacilli,1ZFM7@1386|Bacillus	91061|Bacilli	S	Cysteine dioxygenase type I	cdoA	-	1.13.11.20	ko:K00456	ko00270,ko00430,ko01100,map00270,map00430,map01100	-	R00893	RC00404	ko00000,ko00001,ko01000	-	-	-	CDO_I
PHALIAPI_02988	224308.BSU31150	1.73e-182	509.0	COG1968@1|root,COG1968@2|Bacteria,1TPFA@1239|Firmicutes,4HB0M@91061|Bacilli,1ZD80@1386|Bacillus	91061|Bacilli	V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin	uppP	-	3.6.1.27	ko:K06153	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	BacA
PHALIAPI_02989	224308.BSU31160	4.06e-251	692.0	COG0628@1|root,COG0628@2|Bacteria,1TQ84@1239|Firmicutes,4H9SR@91061|Bacilli,1ZCDX@1386|Bacillus	91061|Bacilli	S	transporter activity	yubA	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
PHALIAPI_02990	224308.BSU31170	4.15e-232	639.0	COG0673@1|root,COG0673@2|Bacteria,1TQSS@1239|Firmicutes,4HCIG@91061|Bacilli,1ZBUF@1386|Bacillus	91061|Bacilli	S	Oxidoreductase	yulF	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0055114,GO:0102497	-	ko:K22230	ko00562,ko01120,map00562,map01120	-	R09954	RC00182	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA
PHALIAPI_02991	224308.BSU31180	0.0	865.0	COG4806@1|root,COG4806@2|Bacteria,1TS42@1239|Firmicutes,4HBQP@91061|Bacilli,1ZQ7E@1386|Bacillus	91061|Bacilli	G	Belongs to the rhamnose isomerase family	rhaA	GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008740,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0019321,GO:0019324,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575	2.7.1.5,5.3.1.14	ko:K00848,ko:K01813	ko00040,ko00051,ko01120,map00040,map00051,map01120	-	R01902,R02437,R03014	RC00002,RC00017,RC00434	ko00000,ko00001,ko01000	-	-	-	RhaA
PHALIAPI_02992	224308.BSU31190	8.22e-72	215.0	COG3254@1|root,COG3254@2|Bacteria,1VA1C@1239|Firmicutes,4HM5P@91061|Bacilli,1ZGZB@1386|Bacillus	91061|Bacilli	G	Involved in the anomeric conversion of L-rhamnose	rhaM	-	5.1.3.32	ko:K03534	-	-	R10819	RC00563	ko00000,ko01000	-	-	-	rhaM
PHALIAPI_02993	224308.BSU31200	0.0	943.0	COG1070@1|root,COG1070@2|Bacteria,1TP7Z@1239|Firmicutes,4HB5X@91061|Bacilli,1ZAQ8@1386|Bacillus	91061|Bacilli	G	Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate	rhaB	GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575	2.7.1.5	ko:K00848	ko00040,ko00051,ko01120,map00040,map00051,map01120	-	R01902,R03014	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
PHALIAPI_02994	224308.BSU31210	8.22e-172	481.0	COG1349@1|root,COG1349@2|Bacteria,1TSHY@1239|Firmicutes,4HD6Y@91061|Bacilli,1ZCCE@1386|Bacillus	91061|Bacilli	K	COG1349 Transcriptional regulators of sugar metabolism	yulB	-	-	ko:K02530,ko:K22103	-	-	-	-	ko00000,ko03000	-	-	-	DeoRC,HTH_DeoR
PHALIAPI_02995	224308.BSU31220	0.0	1367.0	COG1028@1|root,COG3347@1|root,COG1028@2|Bacteria,COG3347@2|Bacteria,1TQB8@1239|Firmicutes,4HB28@91061|Bacilli,1ZC3P@1386|Bacillus	91061|Bacilli	IQ	Class II Aldolase and Adducin N-terminal domain	yuxG	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II,adh_short_C2
PHALIAPI_02996	224308.BSU31230	0.0	908.0	COG0840@1|root,COG0840@2|Bacteria,1TP5A@1239|Firmicutes,4H9RZ@91061|Bacilli,1ZBEA@1386|Bacillus	91061|Bacilli	NT	chemotaxis protein	mcpA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,dCache_1
PHALIAPI_02997	224308.BSU31240	0.0	1089.0	COG0840@1|root,COG0840@2|Bacteria,1TP5A@1239|Firmicutes,4H9RZ@91061|Bacilli,1ZBEA@1386|Bacillus	91061|Bacilli	NT	chemotaxis protein	mcpA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,dCache_1
PHALIAPI_02998	224308.BSU31250	6.7e-290	813.0	COG0840@1|root,COG0840@2|Bacteria,1TP5A@1239|Firmicutes,4H9RZ@91061|Bacilli,1ZBEA@1386|Bacillus	91061|Bacilli	NT	chemotaxis protein	mcpA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,dCache_1
PHALIAPI_02999	224308.BSU31260	0.0	883.0	COG0840@1|root,COG0840@2|Bacteria,1TP5A@1239|Firmicutes,4H9RZ@91061|Bacilli,1ZBEA@1386|Bacillus	91061|Bacilli	NT	chemotaxis protein	mcpB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,dCache_1
PHALIAPI_03000	224308.BSU31270	2.51e-180	501.0	arCOG13259@1|root,2Z8C5@2|Bacteria,1V23R@1239|Firmicutes,4HB9U@91061|Bacilli,1ZG1S@1386|Bacillus	91061|Bacilli	H	Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links	tgl	GO:0000003,GO:0003674,GO:0003810,GO:0003824,GO:0008150,GO:0016740,GO:0016746,GO:0016755,GO:0019954,GO:0030436,GO:0032502,GO:0043934,GO:0140096	2.3.2.13	ko:K00686	-	-	-	-	ko00000,ko01000	-	-	-	-
PHALIAPI_03001	720555.BATR1942_13465	2.9e-47	152.0	2E9DY@1|root,333MH@2|Bacteria,1VEUX@1239|Firmicutes,4HPGE@91061|Bacilli,1ZITW@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03002	224308.BSU31280	3.63e-95	276.0	COG0432@1|root,COG0432@2|Bacteria,1V6J7@1239|Firmicutes,4HI2R@91061|Bacilli,1ZGBA@1386|Bacillus	91061|Bacilli	S	Uncharacterised protein family UPF0047	yugU	-	-	-	-	-	-	-	-	-	-	-	UPF0047
PHALIAPI_03003	224308.BSU31290	0.0	1146.0	COG0366@1|root,COG0366@2|Bacteria,1TP53@1239|Firmicutes,4HA1G@91061|Bacilli,1ZASC@1386|Bacillus	91061|Bacilli	G	COG0366 Glycosidases	yugT	-	3.2.1.10,3.2.1.20	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R01718,R01791,R06087,R06088,R06199	RC00028,RC00049,RC00059,RC00077,RC00451	ko00000,ko00001,ko01000	-	GH13,GH31	iSB619.SA_RS07580	Alpha-amylase,Malt_amylase_C
PHALIAPI_03004	224308.BSU31300	6.92e-298	814.0	COG1253@1|root,COG1253@2|Bacteria,1TPN0@1239|Firmicutes,4H9SB@91061|Bacilli,1ZBAN@1386|Bacillus	91061|Bacilli	S	COG1253 Hemolysins and related proteins containing CBS domains	yugS	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
PHALIAPI_03005	224308.BSU31310	4.8e-150	423.0	COG2738@1|root,COG2738@2|Bacteria,1TPD3@1239|Firmicutes,4HB8Z@91061|Bacilli,1ZD1M@1386|Bacillus	91061|Bacilli	S	Zn-dependent protease	yugP	-	-	ko:K06973	-	-	-	-	ko00000	-	-	-	Zn_peptidase_2
PHALIAPI_03006	224308.BSU31319	1.58e-50	160.0	29RVY@1|root,30D00@2|Bacteria,1UAMN@1239|Firmicutes,4IM08@91061|Bacilli,1ZIKF@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03007	224308.BSU31321	1.01e-68	208.0	2EEW1@1|root,338PF@2|Bacteria,1VIRW@1239|Firmicutes,4HP92@91061|Bacilli,1ZJ73@1386|Bacillus	91061|Bacilli	S	Membrane-integrating protein Mistic	mstX	-	-	-	-	-	-	-	-	-	-	-	Mistic
PHALIAPI_03008	224308.BSU31322	2.92e-232	639.0	COG1226@1|root,COG1226@2|Bacteria,1TS7X@1239|Firmicutes,4HCIB@91061|Bacilli,1ZCD3@1386|Bacillus	91061|Bacilli	P	COG1226 Kef-type K transport systems	yugO	-	-	ko:K10716	-	-	-	-	ko00000,ko02000	1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6	-	-	Ion_trans_2,TrkA_N
PHALIAPI_03009	224308.BSU31330	1.72e-94	275.0	2E71A@1|root,331JZ@2|Bacteria,1VG6F@1239|Firmicutes,4HNSV@91061|Bacilli,1ZHXR@1386|Bacillus	91061|Bacilli	S	YugN-like family	yugN	-	-	-	-	-	-	-	-	-	-	-	YugN
PHALIAPI_03011	224308.BSU31350	0.0	900.0	COG0166@1|root,COG0166@2|Bacteria,1TP29@1239|Firmicutes,4H9VI@91061|Bacilli,1ZB6B@1386|Bacillus	91061|Bacilli	G	Belongs to the GPI family	pgi	GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576	5.3.1.9	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00004,M00114	R02739,R02740,R03321	RC00376,RC00563	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGI
PHALIAPI_03012	224308.BSU31360	4.57e-290	791.0	COG1979@1|root,COG1979@2|Bacteria,1TPS3@1239|Firmicutes,4H9TR@91061|Bacilli,1ZDAC@1386|Bacillus	91061|Bacilli	C	Dehydrogenase	yugK	-	-	ko:K19955	-	-	-	-	ko00000,ko01000	-	-	-	Fe-ADH
PHALIAPI_03013	224308.BSU31370	4.72e-286	780.0	COG1979@1|root,COG1979@2|Bacteria,1TPS3@1239|Firmicutes,4H9TR@91061|Bacilli,1ZBKF@1386|Bacillus	91061|Bacilli	C	oxidoreductases, Fe-dependent alcohol dehydrogenase family	yugJ	-	-	ko:K19955	-	-	-	-	ko00000,ko01000	-	-	-	Fe-ADH
PHALIAPI_03014	224308.BSU31380	2.21e-46	149.0	COG2155@1|root,COG2155@2|Bacteria,1VEQJ@1239|Firmicutes,4HP56@91061|Bacilli,1ZHUV@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF378)	yuzA	-	-	ko:K09779	-	-	-	-	ko00000	-	-	-	DUF378
PHALIAPI_03015	224308.BSU31390	1.43e-82	244.0	COG1098@1|root,COG1098@2|Bacteria,1VASQ@1239|Firmicutes,4HKSW@91061|Bacilli,1ZHK5@1386|Bacillus	91061|Bacilli	J	RNA binding protein (contains ribosomal protein S1 domain)	yugI	-	-	ko:K07570,ko:K07571	-	-	-	-	ko00000	-	-	-	S1
PHALIAPI_03016	224308.BSU31400	5.43e-255	701.0	COG0436@1|root,COG0436@2|Bacteria,1TP0J@1239|Firmicutes,4HA13@91061|Bacilli,1ZAWQ@1386|Bacillus	91061|Bacilli	E	Aminotransferase	yugH	-	-	ko:K10907	-	-	-	-	ko00000,ko01000,ko01007	-	-	-	Aminotran_1_2
PHALIAPI_03017	224308.BSU31410	6.74e-112	322.0	COG1522@1|root,COG1522@2|Bacteria,1V3PB@1239|Firmicutes,4HH9K@91061|Bacilli,1ZFM5@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	alaR	-	-	-	-	-	-	-	-	-	-	-	AsnC_trans_reg,HTH_24
PHALIAPI_03018	224308.BSU31420	1.71e-201	557.0	COG2267@1|root,COG2267@2|Bacteria,1TP59@1239|Firmicutes,4HEFN@91061|Bacilli,1ZBTQ@1386|Bacillus	91061|Bacilli	I	Hydrolase	yugF	GO:0003674,GO:0003824,GO:0016787	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_4
PHALIAPI_03019	224308.BSU31430	8.84e-52	163.0	2EACT@1|root,334GP@2|Bacteria,1VJJM@1239|Firmicutes,4HQ2Z@91061|Bacilli,1ZJ49@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF1871)	yugE	-	-	-	-	-	-	-	-	-	-	-	DUF1871
PHALIAPI_03020	224308.BSU31440	4.04e-287	783.0	COG1168@1|root,COG1168@2|Bacteria,1TP5G@1239|Firmicutes,4H9PE@91061|Bacilli,1ZCQC@1386|Bacillus	91061|Bacilli	E	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities	patB	-	4.4.1.8	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	-	R00782,R01286,R02408,R04941	RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
PHALIAPI_03021	224308.BSU31450	1.76e-295	808.0	COG0642@1|root,COG2205@2|Bacteria,1V0MW@1239|Firmicutes,4HEZ5@91061|Bacilli,1ZS1T@1386|Bacillus	91061|Bacilli	T	Histidine kinase	kinB2	GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0022603,GO:0042173,GO:0043937,GO:0043938,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0065007,GO:0071944	2.7.13.3	ko:K07697	ko02020,map02020	M00485	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	5TM-5TMR_LYT,HATPase_c,HisKA
PHALIAPI_03022	224308.BSU31460	8.69e-92	268.0	2DNAX@1|root,32UIM@2|Bacteria,1VATB@1239|Firmicutes,4HKG4@91061|Bacilli,1ZGXU@1386|Bacillus	91061|Bacilli	G	Kinase associated protein B	kapB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K06347	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	KapB
PHALIAPI_03023	224308.BSU31470	6.98e-149	418.0	COG5018@1|root,COG5018@2|Bacteria,1V7QB@1239|Firmicutes,4IRTF@91061|Bacilli,1ZRXX@1386|Bacillus	91061|Bacilli	L	the KinA pathway to sporulation	kapD	-	-	ko:K06348	-	-	-	-	ko00000	-	-	-	RNase_T
PHALIAPI_03025	224308.BSU31480	1.26e-241	667.0	COG0477@1|root,COG2814@2|Bacteria,1TRDJ@1239|Firmicutes,4H9Q9@91061|Bacilli,1ZBN7@1386|Bacillus	91061|Bacilli	EGP	Major facilitator superfamily	yuxJ	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
PHALIAPI_03026	224308.BSU31490	0.0	1231.0	COG0744@1|root,COG0744@2|Bacteria,1TPM5@1239|Firmicutes,4HBBB@91061|Bacilli,1ZCKA@1386|Bacillus	91061|Bacilli	M	Penicillin-binding Protein	pbpD	-	2.4.1.129,3.4.16.4	ko:K12555,ko:K18770	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
PHALIAPI_03027	224308.BSU31500	1.92e-97	283.0	COG3011@1|root,COG3011@2|Bacteria,1V7DJ@1239|Firmicutes,4HIUD@91061|Bacilli,1ZH0A@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yuxK	-	-	-	-	-	-	-	-	-	-	-	DUF393
PHALIAPI_03028	224308.BSU31510	4.19e-113	326.0	2CIBU@1|root,30GF5@2|Bacteria,1V4EG@1239|Firmicutes,4HH80@91061|Bacilli,1ZGKU@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5366)	yufK	-	-	-	-	-	-	-	-	-	-	-	DUF5366
PHALIAPI_03029	224308.BSU31520	0.0	1014.0	COG3290@1|root,COG3290@2|Bacteria,1TQJR@1239|Firmicutes,4H9Q0@91061|Bacilli,1ZBHV@1386|Bacillus	91061|Bacilli	T	Signal transduction histidine kinase regulating citrate malate metabolism	malK	-	2.7.13.3	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	M00487,M00489,M00490	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,PAS,SPOB_a,sCache_3_2
PHALIAPI_03030	224308.BSU31530	3.26e-162	454.0	COG4565@1|root,COG4565@2|Bacteria,1V3PK@1239|Firmicutes,4HGXB@91061|Bacilli,1ZFRB@1386|Bacillus	91061|Bacilli	T	COG4565 Response regulator of citrate malate metabolism	dcuR	-	-	ko:K02475,ko:K11615	ko02020,map02020	M00490	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_11,Response_reg
PHALIAPI_03031	224308.BSU31540	1.28e-253	696.0	COG1744@1|root,COG1744@2|Bacteria,1TPEU@1239|Firmicutes,4HANH@91061|Bacilli,1ZBS3@1386|Bacillus	91061|Bacilli	S	ABC-type transport system, periplasmic component surface lipoprotein	tcsA	-	-	ko:K02058,ko:K07335	-	M00221	-	-	ko00000,ko00002,ko02000	3.A.1.2	-	-	Bmp
PHALIAPI_03032	224308.BSU31550	0.0	962.0	COG3845@1|root,COG3845@2|Bacteria,1UYQA@1239|Firmicutes,4HVSH@91061|Bacilli,1ZS12@1386|Bacillus	91061|Bacilli	S	ABC transporter, ATP-binding protein	yufO	-	3.6.3.17	ko:K02056	-	M00221	-	-	ko00000,ko00002,ko01000,ko02000	3.A.1.2	-	-	ABC_tran
PHALIAPI_03033	224308.BSU31560	4.31e-235	648.0	COG4603@1|root,COG4603@2|Bacteria,1TP1F@1239|Firmicutes,4H9VE@91061|Bacilli,1ZCTP@1386|Bacillus	91061|Bacilli	S	Belongs to the binding-protein-dependent transport system permease family	yufP	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944	-	ko:K02057	-	M00221	-	-	ko00000,ko00002,ko02000	3.A.1.2	-	-	BPD_transp_2
PHALIAPI_03034	224308.BSU31570	4.9e-215	595.0	COG1079@1|root,COG1079@2|Bacteria,1TP8Y@1239|Firmicutes,4HAX4@91061|Bacilli,1ZAYF@1386|Bacillus	91061|Bacilli	S	Belongs to the binding-protein-dependent transport system permease family	yufQ	-	-	ko:K02057	-	M00221	-	-	ko00000,ko00002,ko02000	3.A.1.2	-	-	BPD_transp_2
PHALIAPI_03035	224308.BSU31580	3.25e-308	842.0	COG3493@1|root,COG3493@2|Bacteria,1TR97@1239|Firmicutes,4HBS8@91061|Bacilli,1ZC12@1386|Bacillus	91061|Bacilli	C	COG3493 Na citrate symporter	malP	-	-	ko:K11616	ko02020,map02020	-	-	-	ko00000,ko00001	2.A.24.2	-	-	2HCT
PHALIAPI_03036	720555.BATR1942_13645	1.73e-22	88.6	2ASDS@1|root,31HT9@2|Bacteria,1UAMP@1239|Firmicutes,4IM09@91061|Bacilli,1ZIKJ@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03037	224308.BSU31600	0.0	1488.0	COG1009@1|root,COG2111@1|root,COG1009@2|Bacteria,COG2111@2|Bacteria,1TQW4@1239|Firmicutes,4H9YR@91061|Bacilli,1ZAZ0@1386|Bacillus	91061|Bacilli	CP	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit	mrpA	GO:0003674,GO:0005215,GO:0005451,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015491,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0035725,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600	-	ko:K05565	-	-	-	-	ko00000,ko02000	2.A.63.1,2.A.63.2	-	-	DUF4040,Proton_antipo_M,Proton_antipo_N
PHALIAPI_03038	224308.BSU31610	7.66e-91	266.0	COG2111@1|root,COG2111@2|Bacteria,1V3VF@1239|Firmicutes,4HHAN@91061|Bacilli,1ZHC0@1386|Bacillus	91061|Bacilli	P	Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali	mrpB	-	-	ko:K05566	-	-	-	-	ko00000,ko02000	2.A.63.1,2.A.63.2	-	-	MnhB
PHALIAPI_03039	224308.BSU31620	1.72e-66	202.0	COG1006@1|root,COG1006@2|Bacteria,1V7CR@1239|Firmicutes,4HJHX@91061|Bacilli,1ZH1G@1386|Bacillus	91061|Bacilli	P	Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali	mrpC	-	-	ko:K05567	-	-	-	-	ko00000,ko02000	2.A.63.1,2.A.63.2	-	-	Oxidored_q2
PHALIAPI_03040	224308.BSU31630	0.0	899.0	COG0651@1|root,COG0651@2|Bacteria,1TRAT@1239|Firmicutes,4HA10@91061|Bacilli,1ZB2A@1386|Bacillus	91061|Bacilli	CP	Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali	mrpD	GO:0003674,GO:0005215,GO:0005451,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015491,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0035725,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600	-	ko:K05568	-	-	-	-	ko00000,ko02000	2.A.63.1,2.A.63.2	-	iSB619.SA_RS04615	Proton_antipo_M
PHALIAPI_03041	224308.BSU31640	2.12e-102	297.0	COG1863@1|root,COG1863@2|Bacteria,1V52M@1239|Firmicutes,4HI4G@91061|Bacilli,1ZGAK@1386|Bacillus	91061|Bacilli	P	Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali	mrpE	-	-	ko:K05569	-	-	-	-	ko00000,ko02000	2.A.63.1,2.A.63.2	-	-	MNHE
PHALIAPI_03042	224308.BSU31650	2.23e-51	163.0	COG2212@1|root,COG2212@2|Bacteria,1VFB4@1239|Firmicutes,4HNQY@91061|Bacilli,1ZI42@1386|Bacillus	91061|Bacilli	P	Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali	mrpF	-	-	ko:K05570	-	-	-	-	ko00000,ko02000	2.A.63.1,2.A.63.2	-	iYO844.BSU31650	MrpF_PhaF
PHALIAPI_03043	224308.BSU31660	8.49e-79	234.0	COG1320@1|root,COG1320@2|Bacteria,1VABT@1239|Firmicutes,4HKX5@91061|Bacilli,1ZHVK@1386|Bacillus	91061|Bacilli	P	COG1320 Multisubunit Na H antiporter, MnhG subunit	mrpG	-	-	ko:K05571	-	-	-	-	ko00000,ko02000	2.A.63.1,2.A.63.2	-	iYO844.BSU31660	PhaG_MnhG_YufB
PHALIAPI_03044	224308.BSU31670	1.58e-82	244.0	COG2050@1|root,COG2050@2|Bacteria,1V7G2@1239|Firmicutes,4HIIA@91061|Bacilli,1ZGY5@1386|Bacillus	91061|Bacilli	Q	protein, possibly involved in aromatic compounds catabolism	yuxO	-	-	-	-	-	-	-	-	-	-	-	4HBT
PHALIAPI_03045	224308.BSU31680	2.06e-150	423.0	COG2197@1|root,COG2197@2|Bacteria,1V2KZ@1239|Firmicutes,4HCF0@91061|Bacilli,1ZH4R@1386|Bacillus	91061|Bacilli	K	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	comA	-	-	ko:K07691	ko02020,ko02024,map02020,map02024	M00476	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	GerE,Response_reg
PHALIAPI_03046	326423.RBAM_028770	0.0	891.0	COG4585@1|root,COG4585@2|Bacteria,1UBX4@1239|Firmicutes,4HCU8@91061|Bacilli,1ZDCQ@1386|Bacillus	91061|Bacilli	T	Histidine kinase	comP	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.7.13.3	ko:K07680	ko02020,ko02024,map02020,map02024	M00476	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA_3,PAS_3
PHALIAPI_03048	1051501.AYTL01000004_gene3795	2.19e-163	462.0	COG0142@1|root,COG0142@2|Bacteria,1V2BA@1239|Firmicutes,4HITP@91061|Bacilli,1ZRU4@1386|Bacillus	91061|Bacilli	H	Belongs to the FPP GGPP synthase family	comQ	-	-	ko:K02251	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	-	-	-	polyprenyl_synt
PHALIAPI_03049	1274524.BSONL12_14624	6.29e-10	55.1	2BH1T@1|root,32B28@2|Bacteria,1UB34@1239|Firmicutes,4IMFU@91061|Bacilli,1ZK2F@1386|Bacillus	91061|Bacilli	S	DegQ (SacQ) family	-	-	-	-	-	-	-	-	-	-	-	-	DegQ
PHALIAPI_03050	1384049.CD29_07665	9.77e-08	53.1	2E2ZD@1|root,32Y01@2|Bacteria,1VHQD@1239|Firmicutes,4HNXI@91061|Bacilli,3IYR6@400634|Lysinibacillus	91061|Bacilli	-	-	yuzC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03051	224308.BSU31740	2.92e-298	813.0	COG3434@1|root,COG3434@2|Bacteria,1TPWC@1239|Firmicutes,4HD4Q@91061|Bacilli,1ZDNG@1386|Bacillus	91061|Bacilli	T	signal transduction protein containing EAL and modified HD-GYP domains	yuxH	-	-	-	-	-	-	-	-	-	-	-	EAL,HDOD
PHALIAPI_03052	224308.BSU31750	0.0	941.0	COG1488@1|root,COG1488@2|Bacteria,1TPDW@1239|Firmicutes,4HAI4@91061|Bacilli,1ZCGY@1386|Bacillus	91061|Bacilli	H	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP	pncB	-	6.3.4.21	ko:K00763	ko00760,ko01100,map00760,map01100	-	R01724	RC00033	ko00000,ko00001,ko01000	-	-	iYO844.BSU31750	NAPRTase
PHALIAPI_03053	224308.BSU31760	3.27e-134	379.0	COG1335@1|root,COG1335@2|Bacteria,1V1CY@1239|Firmicutes,4HFRS@91061|Bacilli,1ZBY3@1386|Bacillus	91061|Bacilli	Q	COG1335 Amidases related to nicotinamidase	pncA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575	-	ko:K16788	-	-	-	-	ko00000,ko02000	2.A.88.5	-	-	Isochorismatase
PHALIAPI_03054	224308.BSU31770	1.04e-85	253.0	COG5506@1|root,COG5506@2|Bacteria,1VFCV@1239|Firmicutes,4HM3G@91061|Bacilli,1ZRYW@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1694)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1694
PHALIAPI_03055	224308.BSU31780	1.63e-52	165.0	2EGG3@1|root,33A84@2|Bacteria,1VM9Y@1239|Firmicutes,4HR8J@91061|Bacilli,1ZJ1B@1386|Bacillus	91061|Bacilli	S	YueH-like protein	yueH	-	-	-	-	-	-	-	-	-	-	-	YueH
PHALIAPI_03056	224308.BSU31790	1.19e-41	137.0	2ASBM@1|root,31HQV@2|Bacteria,1UAM1@1239|Firmicutes,4IKZP@91061|Bacilli,1ZIHU@1386|Bacillus	91061|Bacilli	S	Spore germination protein gerPA/gerPF	yueG	-	-	ko:K06299	-	-	-	-	ko00000	-	-	-	gerPA
PHALIAPI_03057	224308.BSU31800	2.73e-244	673.0	COG0628@1|root,COG0628@2|Bacteria,1TQ84@1239|Firmicutes,4H9SR@91061|Bacilli,1ZCDX@1386|Bacillus	91061|Bacilli	S	transporter activity	yueF	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
PHALIAPI_03058	224308.BSU31810	8.02e-84	248.0	COG5428@1|root,30DFU@2|Bacteria,1UB8Y@1239|Firmicutes,4IMMP@91061|Bacilli,1ZKFQ@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2283)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2283
PHALIAPI_03059	720555.BATR1942_13755	8.4e-33	115.0	2EFV8@1|root,339ME@2|Bacteria,1VKCB@1239|Firmicutes,4HRFC@91061|Bacilli,1ZIX7@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2642)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2642
PHALIAPI_03060	224308.BSU31830	1.91e-125	357.0	COG1418@1|root,COG1418@2|Bacteria,1V3UK@1239|Firmicutes,4HH7I@91061|Bacilli,1ZFMK@1386|Bacillus	91061|Bacilli	S	phosphohydrolase	yueE	-	-	ko:K06950	-	-	-	-	ko00000	-	-	-	HD
PHALIAPI_03061	224308.BSU31840	2.48e-170	476.0	COG1028@1|root,COG1028@2|Bacteria,1V1Z9@1239|Firmicutes,4HCPI@91061|Bacilli,1ZFQF@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	yueD	-	1.1.1.320	ko:K16216	-	-	-	-	ko00000,ko01000	-	-	-	adh_short
PHALIAPI_03062	224308.BSU31850	4.37e-97	283.0	2CK53@1|root,33EWP@2|Bacteria,1VNC3@1239|Firmicutes,4HSK6@91061|Bacilli,1ZFZV@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5383)	yueC	-	-	-	-	-	-	-	-	-	-	-	DUF5383
PHALIAPI_03063	1051501.AYTL01000004_gene3781	0.0	1430.0	COG1511@1|root,COG1511@2|Bacteria,1TPQK@1239|Firmicutes,4IPYE@91061|Bacilli,1ZREW@1386|Bacillus	91061|Bacilli	S	type VII secretion protein EsaA	yueB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03064	224308.BSU31875	0.0	2918.0	COG0433@1|root,COG1674@1|root,COG0433@2|Bacteria,COG1674@2|Bacteria,1TRA4@1239|Firmicutes,4H9QM@91061|Bacilli,1ZDSN@1386|Bacillus	91061|Bacilli	D	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins	essC	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FHA,FtsK_SpoIIIE,FtsK_SpoIIIE_N
PHALIAPI_03065	224308.BSU31890	3.65e-270	746.0	COG4499@1|root,COG4499@2|Bacteria,1UY6F@1239|Firmicutes,4H9W3@91061|Bacilli,1ZCXX@1386|Bacillus	91061|Bacilli	S	WXG100 protein secretion system (Wss), protein YukC	essB	-	-	-	-	-	-	-	-	-	-	-	YukC
PHALIAPI_03066	224308.BSU31900	1.93e-54	169.0	COG5417@1|root,COG5417@2|Bacteria,1VG9I@1239|Firmicutes,4HPXH@91061|Bacilli,1ZJ9E@1386|Bacillus	91061|Bacilli	S	WXG100 protein secretion system (Wss), protein YukD	yukD	-	-	-	-	-	-	-	-	-	-	-	YukD
PHALIAPI_03067	1051501.AYTL01000004_gene3776	3.93e-60	185.0	COG4842@1|root,COG4842@2|Bacteria,1VHZ4@1239|Firmicutes,4IRN2@91061|Bacilli,1ZRVT@1386|Bacillus	91061|Bacilli	S	Belongs to the WXG100 family	yukE	-	-	-	-	-	-	-	-	-	-	-	WXG100
PHALIAPI_03068	224308.BSU31920	4.91e-291	795.0	COG2508@1|root,COG4465@1|root,COG2508@2|Bacteria,COG4465@2|Bacteria,1TRRH@1239|Firmicutes,4HDGP@91061|Bacilli,1ZB6S@1386|Bacillus	91061|Bacilli	QT	Transcriptional regulator	yukF	GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032502,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576	-	-	-	-	-	-	-	-	-	-	CodY,HTH_30
PHALIAPI_03069	224308.BSU31930	4.02e-262	719.0	COG0686@1|root,COG0686@2|Bacteria,1TNZ5@1239|Firmicutes,4HABX@91061|Bacilli,1ZBQE@1386|Bacillus	91061|Bacilli	E	Belongs to the AlaDH PNT family	ald	GO:0000286,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009653,GO:0009987,GO:0016054,GO:0016491,GO:0016638,GO:0019752,GO:0030154,GO:0030435,GO:0032502,GO:0043436,GO:0043934,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048646,GO:0048856,GO:0048869,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
PHALIAPI_03070	224308.BSU31945	1.2e-168	470.0	COG5634@1|root,COG5634@2|Bacteria,1UESK@1239|Firmicutes,4HESW@91061|Bacilli,1ZG7X@1386|Bacillus	91061|Bacilli	S	Uncharacterized conserved protein (DUF2278)	yukJ	-	-	-	-	-	-	-	-	-	-	-	DUF2278
PHALIAPI_03071	224308.BSU31959	4.08e-47	150.0	COG3251@1|root,COG3251@2|Bacteria,1VQAA@1239|Firmicutes,4HRE7@91061|Bacilli,1ZNVW@1386|Bacillus	91061|Bacilli	S	MbtH-like protein	mbtH	-	-	ko:K05375	ko00261,ko01130,map00261,map01130	M00736	R10880	RC00064,RC00141,RC03296,RC03297,RC03298	ko00000,ko00001,ko00002	-	-	-	MbtH
PHALIAPI_03072	224308.BSU31960	0.0	4645.0	COG1020@1|root,COG1020@2|Bacteria,1TPTH@1239|Firmicutes,4HAHU@91061|Bacilli,1ZB3S@1386|Bacillus	91061|Bacilli	Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	dhbF	-	-	ko:K04780	ko01053,map01053	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding,Thioesterase
PHALIAPI_03073	224308.BSU31970	1.01e-224	619.0	COG1535@1|root,COG3433@1|root,COG1535@2|Bacteria,COG3433@2|Bacteria,1UYPM@1239|Firmicutes,4HCQX@91061|Bacilli,1ZDF4@1386|Bacillus	91061|Bacilli	Q	Isochorismatase family	dhbB	-	3.3.2.1,6.3.2.14	ko:K01252	ko01053,ko01110,ko01130,map01053,map01110,map01130	-	R03037,R07644	RC00162,RC00350,RC02148,RC03046	ko00000,ko00001,ko01000,ko01008	-	-	-	Isochorismatase,PP-binding
PHALIAPI_03074	224308.BSU31980	0.0	1070.0	COG1021@1|root,COG1021@2|Bacteria,1VX0S@1239|Firmicutes,4HCTT@91061|Bacilli,1ZC29@1386|Bacillus	91061|Bacilli	Q	2,3-dihydroxybenzoate-AMP ligase	entE	-	2.7.7.58,6.3.2.14	ko:K02363,ko:K04783	ko01053,ko01110,ko01130,map01053,map01110,map01130	-	R07644	RC00162,RC03046	ko00000,ko00001,ko01000,ko01008	-	-	-	AMP-binding,AMP-binding_C,Chorismate_bind
PHALIAPI_03075	224308.BSU31990	7.03e-289	788.0	COG1169@1|root,COG1169@2|Bacteria,1TSRT@1239|Firmicutes,4HD3U@91061|Bacilli,1ZEF0@1386|Bacillus	91061|Bacilli	HQ	Isochorismate synthase	dhbC	-	5.4.4.2	ko:K02361	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	M00116	R01717	RC00588	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_bind
PHALIAPI_03076	224308.BSU32000	9.66e-177	493.0	COG1028@1|root,COG1028@2|Bacteria,1TRFM@1239|Firmicutes,4HG6Y@91061|Bacilli,1ZEGF@1386|Bacillus	91061|Bacilli	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	dhbA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281	1.3.1.28	ko:K00216	ko01053,ko01110,ko01130,map01053,map01110,map01130	-	R01505	RC00534	ko00000,ko00001,ko01000	-	-	-	adh_short,adh_short_C2
PHALIAPI_03077	224308.BSU32010	4.96e-210	580.0	COG2819@1|root,COG2819@2|Bacteria,1V0WQ@1239|Firmicutes,4HEAZ@91061|Bacilli,1ZGN9@1386|Bacillus	91061|Bacilli	S	Putative esterase	eSD	-	-	ko:K07017	-	-	-	-	ko00000	-	-	-	Esterase
PHALIAPI_03078	224308.BSU32020	1.13e-155	435.0	COG2041@1|root,COG2041@2|Bacteria,1V1P9@1239|Firmicutes,4HFQC@91061|Bacilli,1ZD5R@1386|Bacillus	91061|Bacilli	S	Oxidoreductase molybdopterin binding domain	yuiH	-	-	-	-	-	-	-	-	-	-	-	Oxidored_molyb
PHALIAPI_03079	224308.BSU32030	1.13e-122	352.0	COG1268@1|root,COG1268@2|Bacteria,1TS7R@1239|Firmicutes,4HC1H@91061|Bacilli,1ZCIP@1386|Bacillus	91061|Bacilli	S	Biotin biosynthesis protein	bioY	-	-	ko:K03523	ko02010,map02010	M00581,M00582	-	-	ko00000,ko00001,ko00002,ko02000	2.A.88.1,2.A.88.2	-	-	BioY
PHALIAPI_03080	224308.BSU32040	3.65e-279	768.0	COG2056@1|root,COG2056@2|Bacteria,1TSRY@1239|Firmicutes,4HBK6@91061|Bacilli,1ZB9I@1386|Bacillus	91061|Bacilli	S	antiporter	yuiF	-	-	ko:K07084	-	-	-	-	ko00000,ko02000	2.A.8.1.12	-	iSB619.SA_RS04585	Na_H_antiport_2,Na_H_antiporter
PHALIAPI_03081	224308.BSU32050	0.0	967.0	COG0260@1|root,COG0260@2|Bacteria,1TPJZ@1239|Firmicutes,4HAPW@91061|Bacilli,1ZBZU@1386|Bacillus	91061|Bacilli	E	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides	pepA	-	3.4.11.1	ko:K01255	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M17,Peptidase_M17_N
PHALIAPI_03082	224308.BSU32060	8.63e-102	295.0	COG1963@1|root,COG1963@2|Bacteria,1VAVC@1239|Firmicutes,4HHA6@91061|Bacilli,1ZFKA@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yuiD	-	-	ko:K09775	-	-	-	-	ko00000	-	-	-	DUF212
PHALIAPI_03083	224308.BSU32070	2.69e-150	423.0	COG3584@1|root,COG3584@2|Bacteria,1UYMN@1239|Firmicutes,4HIVQ@91061|Bacilli,1ZDD1@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yuiC	-	-	-	-	-	-	-	-	-	-	-	3D
PHALIAPI_03084	224308.BSU32080	5.41e-44	145.0	2CDZ2@1|root,32RYS@2|Bacteria,1VABM@1239|Firmicutes,4HKKB@91061|Bacilli,1ZHT7@1386|Bacillus	91061|Bacilli	S	Putative membrane protein	yuiB	-	-	-	-	-	-	-	-	-	-	-	YuiB
PHALIAPI_03085	224308.BSU32100	9.81e-300	816.0	COG1252@1|root,COG1252@2|Bacteria,1TR6X@1239|Firmicutes,4HA14@91061|Bacilli,1ZAV9@1386|Bacillus	91061|Bacilli	C	NADH dehydrogenase	yumB	GO:0003674,GO:0003824,GO:0003955,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0019646,GO:0022900,GO:0022904,GO:0044237,GO:0045333,GO:0055114	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	iYO844.BSU32100	Pyr_redox_2
PHALIAPI_03086	224308.BSU32110	1.16e-240	661.0	COG0492@1|root,COG0492@2|Bacteria,1TRPN@1239|Firmicutes,4H9V7@91061|Bacilli,1ZCEZ@1386|Bacillus	91061|Bacilli	C	reductase	yumC	-	1.18.1.2,1.19.1.1	ko:K21567	-	-	-	-	ko00000,ko01000	-	-	iYO844.BSU32110	Pyr_redox_2
PHALIAPI_03088	224308.BSU32130	2.61e-234	644.0	COG0516@1|root,COG0516@2|Bacteria,1TNYF@1239|Firmicutes,4HA55@91061|Bacilli,1ZCDA@1386|Bacillus	91061|Bacilli	F	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides	guaC	-	1.7.1.7	ko:K00364	ko00230,map00230	-	R01134	RC00457	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS06660	IMPDH
PHALIAPI_03089	224308.BSU32140	4.04e-149	419.0	COG2808@1|root,COG2808@2|Bacteria,1UYCC@1239|Firmicutes,4HGV6@91061|Bacilli,1ZQZA@1386|Bacillus	91061|Bacilli	K	Putative FMN-binding domain	paiB	-	-	ko:K07734	-	-	-	-	ko00000,ko03000	-	-	-	FMN_bind_2
PHALIAPI_03090	224308.BSU32150	9.39e-114	327.0	COG0454@1|root,COG0456@2|Bacteria,1V1RG@1239|Firmicutes,4HFN7@91061|Bacilli,1ZDTF@1386|Bacillus	91061|Bacilli	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	paiA	GO:0003674,GO:0003824,GO:0004145,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008080,GO:0008150,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0043937,GO:0043939,GO:0044424,GO:0044464,GO:0048519,GO:0050789,GO:0050793,GO:0051093,GO:0065007	2.3.1.57	ko:K22441	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_10
PHALIAPI_03091	224308.BSU32160	6.81e-83	244.0	COG0316@1|root,COG0316@2|Bacteria,1V6IN@1239|Firmicutes,4HIKA@91061|Bacilli,1ZQR6@1386|Bacillus	91061|Bacilli	S	Belongs to the HesB IscA family	erpA	-	-	ko:K13628	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
PHALIAPI_03092	224308.BSU32170	6.46e-207	572.0	COG0253@1|root,COG0253@2|Bacteria,1TPMN@1239|Firmicutes,4HBH4@91061|Bacilli,1ZD98@1386|Bacillus	91061|Bacilli	E	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan	dapF	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.1.1.7	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00527	R02735	RC00302	ko00000,ko00001,ko00002,ko01000	-	-	-	DAP_epimerase
PHALIAPI_03093	224308.BSU32180	6.25e-270	741.0	COG1972@1|root,COG1972@2|Bacteria,1TRSK@1239|Firmicutes,4HA8N@91061|Bacilli,1ZAW2@1386|Bacillus	91061|Bacilli	F	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family	yutK	GO:0003674,GO:0005215,GO:0005337,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015858,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:1901264,GO:1901505,GO:1901642	-	ko:K03317	-	-	-	-	ko00000	2.A.41	-	iYO844.BSU32180	Gate,Nucleos_tra2_C,Nucleos_tra2_N
PHALIAPI_03094	224308.BSU32190	1.74e-52	164.0	COG4844@1|root,COG4844@2|Bacteria,1VFJJ@1239|Firmicutes,4HNQ8@91061|Bacilli,1ZHVJ@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0349 family	yuzB	-	-	-	-	-	-	-	-	-	-	-	DUF1450
PHALIAPI_03095	224308.BSU32200	1.12e-253	695.0	COG1252@1|root,COG1252@2|Bacteria,1TPE6@1239|Firmicutes,4H9MY@91061|Bacilli,1ZC0V@1386|Bacillus	91061|Bacilli	C	NADH dehydrogenase	yutJ	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
PHALIAPI_03096	224308.BSU32210	4.48e-73	219.0	COG4837@1|root,COG4837@2|Bacteria,1VA2D@1239|Firmicutes,4HKZN@91061|Bacilli,1ZI07@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yuzD	-	-	-	-	-	-	-	-	-	-	-	DUF1462
PHALIAPI_03097	224308.BSU32220	1.26e-47	153.0	COG0694@1|root,COG0694@2|Bacteria,1VAAU@1239|Firmicutes,4HKQ8@91061|Bacilli,1ZHTR@1386|Bacillus	91061|Bacilli	O	COG0694 Thioredoxin-like proteins and domains	yutI	-	-	-	-	-	-	-	-	-	-	-	NifU
PHALIAPI_03098	224308.BSU32230	0.0	1202.0	COG0823@1|root,COG1506@1|root,COG4946@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,COG4946@2|Bacteria,1TR2N@1239|Firmicutes,4H9RR@91061|Bacilli,1ZB2Q@1386|Bacillus	91061|Bacilli	EU	peptidase	yuxL	-	3.4.19.1	ko:K01303	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PD40,Peptidase_S9
PHALIAPI_03099	224308.BSU32240	2.57e-221	610.0	COG0083@1|root,COG0083@2|Bacteria,1TRWS@1239|Firmicutes,4HCQN@91061|Bacilli,1ZBK1@1386|Bacillus	91061|Bacilli	E	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate	thrB	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.1.39	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
PHALIAPI_03100	224308.BSU32250	2.4e-253	695.0	COG0498@1|root,COG0498@2|Bacteria,1TP25@1239|Firmicutes,4HA1F@91061|Bacilli,1ZB11@1386|Bacillus	91061|Bacilli	E	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine	thrC	GO:0003674,GO:0003824,GO:0004795,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008144,GO:0016829,GO:0016835,GO:0016838,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU32250	PALP
PHALIAPI_03101	224308.BSU32260	2.37e-307	838.0	COG0460@1|root,COG0460@2|Bacteria,1TQ2H@1239|Firmicutes,4HBAP@91061|Bacilli,1ZAVJ@1386|Bacillus	91061|Bacilli	E	homoserine dehydrogenase	hom	-	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS06610	ACT,Homoserine_dh,NAD_binding_3
PHALIAPI_03102	224308.BSU32270	1.27e-252	692.0	COG2334@1|root,COG2334@2|Bacteria,1VEZ6@1239|Firmicutes,4HBAB@91061|Bacilli,1ZBAM@1386|Bacillus	91061|Bacilli	S	Spore coat protein	yutH	GO:0005575,GO:0005623,GO:0042601,GO:0042763,GO:0044464	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03103	224308.BSU32280	2.26e-101	294.0	COG1267@1|root,COG1267@2|Bacteria,1V3I0@1239|Firmicutes,4HH4Y@91061|Bacilli,1ZFQE@1386|Bacillus	91061|Bacilli	I	COG1267 Phosphatidylglycerophosphatase A and related proteins	yutG	-	3.1.3.27	ko:K01095	ko00564,ko01100,map00564,map01100	-	R02029	RC00017	ko00000,ko00001,ko01000	-	-	-	PgpA
PHALIAPI_03104	224308.BSU32290	3.69e-183	509.0	COG0647@1|root,COG0647@2|Bacteria,1TQGM@1239|Firmicutes,4HA3R@91061|Bacilli,1ZB73@1386|Bacillus	91061|Bacilli	G	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro	nagD	-	3.1.3.41	ko:K01101	ko00627,ko01120,map00627,map01120	-	R03024	RC00151	ko00000,ko00001,ko01000	-	-	-	Hydrolase_6,Hydrolase_like
PHALIAPI_03105	224308.BSU32300	2.29e-97	283.0	COG2445@1|root,COG2445@2|Bacteria,1V6HM@1239|Firmicutes,4HITV@91061|Bacilli,1ZGY2@1386|Bacillus	91061|Bacilli	S	Protein of unknown function DUF86	yutE	-	-	-	-	-	-	-	-	-	-	-	DUF86
PHALIAPI_03106	1051501.AYTL01000004_gene3739	3.2e-63	192.0	COG4470@1|root,COG4470@2|Bacteria,1VA85@1239|Firmicutes,4HKF7@91061|Bacilli,1ZHY5@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yutD	-	-	-	-	-	-	-	-	-	-	-	DUF1027
PHALIAPI_03107	224308.BSU32320	7.77e-144	406.0	2EHES@1|root,33B6Q@2|Bacteria,1VNN8@1239|Firmicutes,4HRDX@91061|Bacilli,1ZFFJ@1386|Bacillus	91061|Bacilli	S	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)	yutC	-	-	-	-	-	-	-	-	-	-	-	Spore_YhcN_YlaJ
PHALIAPI_03108	224308.BSU32330	5.56e-215	593.0	COG0320@1|root,COG0320@2|Bacteria,1TQM4@1239|Firmicutes,4H9SW@91061|Bacilli,1ZB5D@1386|Bacillus	91061|Bacilli	H	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	lipA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576	2.8.1.8	ko:K03644	ko00785,ko01100,map00785,map01100	-	R07767,R07768	RC01978	ko00000,ko00001,ko01000	-	-	-	LIAS_N,Radical_SAM
PHALIAPI_03109	224308.BSU32340	4.42e-251	687.0	COG0739@1|root,COG0739@2|Bacteria,1TQMQ@1239|Firmicutes,4HC7V@91061|Bacilli,1ZAQT@1386|Bacillus	91061|Bacilli	M	Peptidase, M23	lytH	-	-	ko:K21472	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_M23
PHALIAPI_03110	224308.BSU32350	3.49e-169	474.0	2B51H@1|root,31XUS@2|Bacteria,1V6KA@1239|Firmicutes,4HKBP@91061|Bacilli,1ZFY9@1386|Bacillus	91061|Bacilli	S	Sporulation protein YunB (Spo_YunB)	yunB	-	-	-	-	-	-	-	-	-	-	-	Spore_YunB
PHALIAPI_03111	224308.BSU32360	3.28e-63	193.0	COG3377@1|root,COG3377@2|Bacteria,1VAP7@1239|Firmicutes,4HKBM@91061|Bacilli,1ZHYB@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF1805)	yunC	-	-	-	-	-	-	-	-	-	-	-	DUF1805
PHALIAPI_03112	224308.BSU32370	0.0	909.0	COG0737@1|root,COG0737@2|Bacteria,1TQCW@1239|Firmicutes,4HAUC@91061|Bacilli,1ZCJ8@1386|Bacillus	91061|Bacilli	F	Belongs to the 5'-nucleotidase family	yunD	-	3.1.3.5	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	5_nucleotid_C,Metallophos
PHALIAPI_03113	224308.BSU32380	6.51e-181	505.0	COG0730@1|root,COG0730@2|Bacteria,1TPMA@1239|Firmicutes,4HCYJ@91061|Bacilli,1ZAPI@1386|Bacillus	91061|Bacilli	S	membrane transporter protein	yunE	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
PHALIAPI_03114	224308.BSU32390	4.26e-220	605.0	COG1801@1|root,COG1801@2|Bacteria,1TPX4@1239|Firmicutes,4HA0X@91061|Bacilli,1ZATP@1386|Bacillus	91061|Bacilli	S	Protein of unknown function DUF72	yunF	-	-	-	-	-	-	-	-	-	-	-	DUF72
PHALIAPI_03115	224308.BSU32400	6.96e-76	226.0	2E0C4@1|root,32X51@2|Bacteria,1VCSV@1239|Firmicutes,4HNEN@91061|Bacilli,1ZI88@1386|Bacillus	91061|Bacilli	-	-	yunG	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03116	224308.BSU32410	0.0	894.0	COG0044@1|root,COG0044@2|Bacteria,1TP8C@1239|Firmicutes,4HBNG@91061|Bacilli,1ZBUB@1386|Bacillus	91061|Bacilli	F	Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring	allB	GO:0003674,GO:0003824,GO:0004038,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575	3.5.2.5	ko:K01466	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R02425	RC00680	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
PHALIAPI_03117	224308.BSU32420	0.0	1033.0	COG2508@1|root,COG2508@2|Bacteria,1TRDF@1239|Firmicutes,4H9KC@91061|Bacilli,1ZCWF@1386|Bacillus	91061|Bacilli	QT	COG2508 Regulator of polyketide synthase expression	pucR	-	-	ko:K09684	-	-	-	-	ko00000,ko03000	-	-	-	HTH_30,PucR
PHALIAPI_03118	224308.BSU32430	1.28e-294	807.0	COG2233@1|root,COG2233@2|Bacteria,1TNZZ@1239|Firmicutes,4HBAM@91061|Bacilli,1ZB4S@1386|Bacillus	91061|Bacilli	F	Permease family	pbuX	GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823	-	ko:K03458,ko:K16169,ko:K16170	-	-	-	-	ko00000,ko02000	2.A.40,2.A.40.3.1,2.A.40.3.2	-	-	Xan_ur_permease
PHALIAPI_03119	224308.BSU32440	3.18e-283	777.0	COG2233@1|root,COG2233@2|Bacteria,1TNZZ@1239|Firmicutes,4HBAM@91061|Bacilli,1ZAUK@1386|Bacillus	91061|Bacilli	F	xanthine	pbuX	GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823	-	ko:K16169,ko:K16170	-	-	-	-	ko00000,ko02000	2.A.40.3.1,2.A.40.3.2	-	-	Xan_ur_permease
PHALIAPI_03120	224308.BSU32450	0.0	956.0	COG3195@1|root,COG3648@1|root,COG3195@2|Bacteria,COG3648@2|Bacteria,1UY6S@1239|Firmicutes,4HAQX@91061|Bacilli,1ZCAY@1386|Bacillus	91061|Bacilli	Q	Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin	-	-	1.7.3.3,4.1.1.97	ko:K16838	ko00230,ko00232,ko01100,ko01120,map00230,map00232,map01100,map01120	M00546	R02106,R06604,R07981	RC01551,RC02107,RC02551	ko00000,ko00001,ko00002,ko01000	-	-	-	OHCU_decarbox,Uricase
PHALIAPI_03121	224308.BSU32460	1.26e-73	221.0	COG2351@1|root,COG2351@2|Bacteria,1VATV@1239|Firmicutes,4HKI8@91061|Bacilli,1ZHYV@1386|Bacillus	91061|Bacilli	S	Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily	pucM	GO:0003674,GO:0005488,GO:0005515,GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009112,GO:0009987,GO:0034641,GO:0042802,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564	3.5.2.17	ko:K07127	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R06601	RC03393	ko00000,ko00001,ko00002,ko01000,ko02000	9.B.35.1.2,9.B.35.2	-	-	Transthyretin
PHALIAPI_03122	221109.22777071	0.000154	41.2	2DRND@1|root,33CCV@2|Bacteria,1VNPA@1239|Firmicutes,4HR66@91061|Bacilli,23MAQ@182709|Oceanobacillus	91061|Bacilli	S	Protein of unknown function (Tiny_TM_bacill)	-	-	-	-	-	-	-	-	-	-	-	-	Tiny_TM_bacill
PHALIAPI_03123	224308.BSU32470	5.71e-121	345.0	COG2080@1|root,COG2080@2|Bacteria,1V6HE@1239|Firmicutes,4HINQ@91061|Bacilli,1ZGEA@1386|Bacillus	91061|Bacilli	C	COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs	-	-	1.17.1.4,1.2.5.3	ko:K00087,ko:K03518	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103,R11168	RC00143,RC02800	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU32470	Fer2,Fer2_2
PHALIAPI_03124	224308.BSU32480	0.0	1448.0	COG1529@1|root,COG1529@2|Bacteria,1TP7U@1239|Firmicutes,4HC1W@91061|Bacilli,1ZC08@1386|Bacillus	91061|Bacilli	C	COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs	pucD	-	1.17.1.4	ko:K00087	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU32480	Ald_Xan_dh_C,Ald_Xan_dh_C2,Fer2,Fer2_2
PHALIAPI_03125	224308.BSU32490	3.22e-183	511.0	COG1319@1|root,COG1319@2|Bacteria,1TQA5@1239|Firmicutes,4HJ3P@91061|Bacilli,1ZG3A@1386|Bacillus	91061|Bacilli	C	COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs	pucC	-	1.17.1.4,1.2.5.3	ko:K00087,ko:K03519	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103,R11168	RC00143,RC02800	ko00000,ko00001,ko00002,ko01000	-	-	-	CO_deh_flav_C,FAD_binding_5
PHALIAPI_03126	224308.BSU32500	9.85e-140	395.0	COG2068@1|root,COG2068@2|Bacteria,1VA0B@1239|Firmicutes,4HMD3@91061|Bacilli,1ZI29@1386|Bacillus	91061|Bacilli	S	MobA-like NTP transferase domain	pucB	-	1.17.1.4,2.7.7.76	ko:K00087,ko:K07141	ko00230,ko00790,ko01100,ko01120,map00230,map00790,map01100,map01120	M00546	R01768,R02103,R11582	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transf_3
PHALIAPI_03127	224308.BSU32510	1.33e-229	633.0	COG1975@1|root,COG1975@2|Bacteria,1URM5@1239|Firmicutes,4HEI3@91061|Bacilli,1ZD2G@1386|Bacillus	91061|Bacilli	O	COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family	pucA	-	1.17.1.4	ko:K00087,ko:K07402	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	XdhC_C,XdhC_CoxI
PHALIAPI_03129	224308.BSU32520	1.58e-301	822.0	COG0075@1|root,COG0075@2|Bacteria,1TPS0@1239|Firmicutes,4HBDW@91061|Bacilli,1ZC8E@1386|Bacillus	91061|Bacilli	E	COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase	pucG	GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51	ko:K00830,ko:K00839	ko00230,ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00230,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	M00346,M00532	R00369,R00372,R00585,R00588,R10908	RC00006,RC00008,RC00018,RC03305	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
PHALIAPI_03130	224308.BSU32530	6.56e-292	797.0	COG0624@1|root,COG0624@2|Bacteria,1TQ0P@1239|Firmicutes,4HAE4@91061|Bacilli,1ZB60@1386|Bacillus	91061|Bacilli	E	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases	pucF	GO:0000255,GO:0000256,GO:0003674,GO:0003824,GO:0005488,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0017144,GO:0034641,GO:0042737,GO:0043167,GO:0043169,GO:0043603,GO:0043605,GO:0044237,GO:0044248,GO:0044270,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0047652,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575	3.5.3.9	ko:K02083	ko00230,ko01120,map00230,map01120	-	R02423	RC00064	ko00000,ko00001,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28,Peptidase_M42
PHALIAPI_03131	224308.BSU32540	3.63e-215	593.0	COG2356@1|root,COG2356@2|Bacteria,1U9GI@1239|Firmicutes,4IJKB@91061|Bacilli,1ZAYK@1386|Bacillus	91061|Bacilli	L	Ribonuclease	bsn	GO:0005575,GO:0005576	-	-	-	-	-	-	-	-	-	-	Endonuclease_1
PHALIAPI_03132	224308.BSU32550	2.83e-261	716.0	COG3842@1|root,COG3842@2|Bacteria,1TP2M@1239|Firmicutes,4HAMQ@91061|Bacilli,1ZBDW@1386|Bacillus	91061|Bacilli	P	Belongs to the ABC transporter superfamily	msmX	-	-	ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1	-	-	ABC_tran,TOBE,TOBE_2
PHALIAPI_03133	224308.BSU32560	8.71e-175	487.0	COG2188@1|root,COG2188@2|Bacteria,1TVMZ@1239|Firmicutes,4H9TD@91061|Bacilli,1ZCCZ@1386|Bacillus	91061|Bacilli	K	UTRA	frlR1	-	-	ko:K03710,ko:K10711	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
PHALIAPI_03134	224308.BSU32570	2.25e-207	573.0	COG0524@1|root,COG0524@2|Bacteria,1TSST@1239|Firmicutes,4HGU3@91061|Bacilli,1ZREX@1386|Bacillus	91061|Bacilli	G	pfkB family carbohydrate kinase	-	-	2.7.1.218	ko:K10710	-	-	R08124	RC00002,RC00017	ko00000,ko01000	-	-	-	PfkB
PHALIAPI_03135	224308.BSU32580	2.65e-214	592.0	COG0395@1|root,COG0395@2|Bacteria,1TRD1@1239|Firmicutes,4IQN9@91061|Bacilli,1ZRMC@1386|Bacillus	91061|Bacilli	P	COG0395 ABC-type sugar transport system, permease component	-	-	-	ko:K10119	ko02010,map02010	M00196	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.28	-	-	BPD_transp_1
PHALIAPI_03136	224308.BSU32590	3.54e-199	553.0	COG1175@1|root,COG1175@2|Bacteria,1TRU7@1239|Firmicutes,4HAEJ@91061|Bacilli,1ZDHY@1386|Bacillus	91061|Bacilli	G	Binding-protein-dependent transport system inner membrane component	yurN	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	ko:K10118	ko02010,map02010	M00196	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.28	-	-	BPD_transp_1
PHALIAPI_03137	224308.BSU32600	8.81e-302	823.0	COG1653@1|root,COG1653@2|Bacteria,1UY14@1239|Firmicutes,4HEMF@91061|Bacilli,1ZQ33@1386|Bacillus	91061|Bacilli	G	COG1653 ABC-type sugar transport system, periplasmic component	yurO	-	-	ko:K10117	ko02010,map02010	M00196	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.28	-	-	SBP_bac_1,SBP_bac_8
PHALIAPI_03138	224308.BSU32610	5.27e-235	646.0	COG2222@1|root,COG2222@2|Bacteria,1TRTA@1239|Firmicutes,4HB2C@91061|Bacilli,1ZCTQ@1386|Bacillus	91061|Bacilli	M	Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid	frlB	-	-	ko:K10708	-	-	R08125	RC00053,RC01805	ko00000,ko01000	-	-	-	SIS
PHALIAPI_03139	224308.BSU32620	1.36e-84	249.0	COG0322@1|root,COG0322@2|Bacteria,1V8E6@1239|Firmicutes,4HJHV@91061|Bacilli,1ZGGU@1386|Bacillus	91061|Bacilli	L	COG0322 Nuclease subunit of the excinuclease complex	yurQ	GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391	-	-	-	-	-	-	-	-	-	-	GIY-YIG
PHALIAPI_03140	224308.BSU32630	6.19e-263	721.0	COG0665@1|root,COG0665@2|Bacteria,1TQTF@1239|Firmicutes,4HA0F@91061|Bacilli,1ZBU6@1386|Bacillus	91061|Bacilli	E	COG0665 Glycine D-amino acid oxidases (deaminating)	yurR	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0044424,GO:0044464,GO:0055114	1.4.5.1	ko:K00285	ko00360,map00360	-	R01374,R09493	RC00006,RC00025	ko00000,ko00001,ko01000	-	-	-	DAO
PHALIAPI_03142	1051501.AYTL01000004_gene3705	3.35e-56	175.0	2ESBJ@1|root,33JWA@2|Bacteria,1VNSX@1239|Firmicutes,4HS9N@91061|Bacilli,1ZK4C@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03143	1051501.AYTL01000004_gene3704	5.06e-86	253.0	COG0346@1|root,COG0346@2|Bacteria,1V48E@1239|Firmicutes,4HHUT@91061|Bacilli,1ZGA1@1386|Bacillus	91061|Bacilli	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	yurT	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
PHALIAPI_03144	1051501.AYTL01000004_gene3701	0.0	935.0	COG0719@1|root,COG0719@2|Bacteria,1TQ21@1239|Firmicutes,4HA1Z@91061|Bacilli,1ZCDS@1386|Bacillus	91061|Bacilli	O	FeS cluster assembly	sufB	-	-	ko:K07033,ko:K09014	-	-	-	-	ko00000	-	-	-	UPF0051
PHALIAPI_03145	1051501.AYTL01000004_gene3700	6.26e-101	292.0	COG0822@1|root,COG0822@2|Bacteria,1V3H9@1239|Firmicutes,4HIJ0@91061|Bacilli,1ZFQ8@1386|Bacillus	91061|Bacilli	C	COG0822 NifU homolog involved in Fe-S cluster formation	nifU	GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564	-	ko:K04488	-	-	-	-	ko00000	-	-	-	NifU_N
PHALIAPI_03146	224308.BSU32690	2.81e-299	815.0	COG0520@1|root,COG0520@2|Bacteria,1TQ1W@1239|Firmicutes,4HA6Z@91061|Bacilli,1ZB79@1386|Bacillus	91061|Bacilli	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	sufS	-	2.8.1.7,4.4.1.16	ko:K11717	ko00450,ko01100,map00450,map01100	-	R03599,R11528	RC00961,RC01789,RC02313	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
PHALIAPI_03147	224308.BSU32700	1.06e-312	852.0	COG0719@1|root,COG0719@2|Bacteria,1TRT0@1239|Firmicutes,4HB6W@91061|Bacilli,1ZATY@1386|Bacillus	91061|Bacilli	O	assembly protein SufD	sufD	-	-	ko:K07033,ko:K09015	-	-	-	-	ko00000	-	-	-	UPF0051
PHALIAPI_03148	224308.BSU32710	3.82e-183	509.0	COG0396@1|root,COG0396@2|Bacteria,1TQ98@1239|Firmicutes,4HAD9@91061|Bacilli,1ZAW4@1386|Bacillus	91061|Bacilli	O	COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component	sufC	-	-	ko:K09013	-	-	-	-	ko00000,ko02000	-	-	-	ABC_tran
PHALIAPI_03149	224308.BSU32720	1.56e-80	239.0	COG0599@1|root,COG0599@2|Bacteria,1V8W7@1239|Firmicutes,4HHDQ@91061|Bacilli,1ZGYY@1386|Bacillus	91061|Bacilli	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	yurZ	-	-	-	-	-	-	-	-	-	-	-	CMD
PHALIAPI_03150	224308.BSU32730	4.82e-188	523.0	COG1464@1|root,COG1464@2|Bacteria,1TQAS@1239|Firmicutes,4HBK0@91061|Bacilli,1ZATZ@1386|Bacillus	91061|Bacilli	P	Belongs to the NlpA lipoprotein family	metQ	-	-	ko:K02072,ko:K02073	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	Lipoprotein_9
PHALIAPI_03151	224308.BSU32740	6.5e-126	362.0	COG2011@1|root,COG2011@2|Bacteria,1TR59@1239|Firmicutes,4H9NA@91061|Bacilli,1ZCW0@1386|Bacillus	91061|Bacilli	P	COG2011 ABC-type metal ion transport system, permease component	metI	GO:0000101,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0015711,GO:0015821,GO:0015849,GO:0016020,GO:0042940,GO:0044464,GO:0046942,GO:0048473,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072348	-	ko:K02069,ko:K02072	ko02010,map02010	M00211,M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24,9.B.25.1	-	-	BPD_transp_1
PHALIAPI_03152	224308.BSU32750	2.15e-236	651.0	COG1135@1|root,COG1135@2|Bacteria,1TPPN@1239|Firmicutes,4H9VX@91061|Bacilli,1ZAZX@1386|Bacillus	91061|Bacilli	P	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system	metN	GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085	-	ko:K02071	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	iYO844.BSU32750	ABC_tran,NIL
PHALIAPI_03153	224308.BSU32760	1.53e-74	223.0	2CCFT@1|root,330P4@2|Bacteria,1VHK2@1239|Firmicutes,4HP1K@91061|Bacilli,1ZGVX@1386|Bacillus	91061|Bacilli	S	SCP-2 sterol transfer family	yusD	-	-	-	-	-	-	-	-	-	-	-	SCP2
PHALIAPI_03154	224308.BSU32770	2e-73	219.0	COG0526@1|root,COG0526@2|Bacteria,1VEVR@1239|Firmicutes,4HNM9@91061|Bacilli,1ZIVX@1386|Bacillus	91061|Bacilli	CO	Thioredoxin	yusE	GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748	-	-	-	-	-	-	-	-	-	-	Thioredoxin
PHALIAPI_03155	224308.BSU32780	7.62e-97	282.0	COG1658@1|root,COG1658@2|Bacteria,1VBXW@1239|Firmicutes,4HKN4@91061|Bacilli,1ZH1R@1386|Bacillus	91061|Bacilli	L	COG1658 Small primase-like proteins (Toprim domain)	yusF	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043822,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360	-	ko:K07476	-	-	-	-	ko00000	-	-	-	Toprim,Toprim_2
PHALIAPI_03156	224308.BSU32790	7.34e-54	168.0	2ET7S@1|root,33KRT@2|Bacteria,1VP54@1239|Firmicutes,4HRRC@91061|Bacilli,1ZIUE@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2553)	yusG	-	-	-	-	-	-	-	-	-	-	-	DUF2553
PHALIAPI_03157	224308.BSU32800	5.91e-85	250.0	COG0509@1|root,COG0509@2|Bacteria,1V6WV@1239|Firmicutes,4HIMA@91061|Bacilli,1ZGG0@1386|Bacillus	91061|Bacilli	E	Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate	gcvH	GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576	-	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221	RC00022,RC02834	ko00000,ko00001,ko00002	-	-	-	GCV_H
PHALIAPI_03158	224308.BSU32810	4.13e-83	245.0	COG1393@1|root,COG1393@2|Bacteria,1VA5Q@1239|Firmicutes,4HKQQ@91061|Bacilli,1ZH0I@1386|Bacillus	91061|Bacilli	P	Belongs to the ArsC family	yusI	-	1.20.4.1	ko:K00537	-	-	-	-	ko00000,ko01000	-	-	-	ArsC,Glutaredoxin
PHALIAPI_03159	224308.BSU32820	0.0	1132.0	COG1960@1|root,COG1960@2|Bacteria,1TP57@1239|Firmicutes,4HB0J@91061|Bacilli,1ZBUU@1386|Bacillus	91061|Bacilli	I	acyl-CoA dehydrogenase	fadE	-	1.3.8.1	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	-	R01175,R01178,R02661,R03172,R04751	RC00052,RC00068,RC00076,RC00120,RC00148	ko00000,ko00001,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
PHALIAPI_03160	224308.BSU32830	7.74e-278	760.0	COG0183@1|root,COG0183@2|Bacteria,1TP07@1239|Firmicutes,4H9RJ@91061|Bacilli,1ZBKX@1386|Bacillus	91061|Bacilli	I	Belongs to the thiolase family	fadA	-	2.3.1.16	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	M00087,M00113	R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095	RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955	ko00000,ko00001,ko00002,ko01000	-	-	-	Thiolase_C,Thiolase_N
PHALIAPI_03161	224308.BSU32840	0.0	1536.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1TR8J@1239|Firmicutes,4H9XN@91061|Bacilli,1ZATV@1386|Bacillus	91061|Bacilli	I	3-hydroxyacyl-CoA dehydrogenase	fadN	-	1.1.1.35	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	M00087	R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU32840	3HCDH,3HCDH_N,ECH_1
PHALIAPI_03162	1345697.M493_15660	1.11e-13	64.7	2EVX5@1|root,33PAU@2|Bacteria,1W2JM@1239|Firmicutes,4HSMC@91061|Bacilli,1WH0A@129337|Geobacillus	91061|Bacilli	S	YuzL-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YuzL
PHALIAPI_03163	224308.BSU32850	2e-210	582.0	COG0506@1|root,COG0506@2|Bacteria,1TQV3@1239|Firmicutes,4HAC1@91061|Bacilli,1ZB5G@1386|Bacillus	91061|Bacilli	E	Proline dehydrogenase	fadM	GO:0000166,GO:0003674,GO:0003824,GO:0004657,GO:0005488,GO:0006082,GO:0006520,GO:0006560,GO:0006562,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016491,GO:0016645,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	-	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R10507	RC00083	ko00000,ko00001,ko01000	-	-	-	Pro_dh
PHALIAPI_03164	224308.BSU32859	2.23e-54	169.0	2E37R@1|root,32Y7E@2|Bacteria,1VEJ6@1239|Firmicutes,4HNWR@91061|Bacilli,1ZIXG@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03165	224308.BSU32860	8.66e-70	211.0	COG5577@1|root,COG5577@2|Bacteria,1V96G@1239|Firmicutes,4HK73@91061|Bacilli,1ZHVT@1386|Bacillus	91061|Bacilli	M	Coat F domain	yusN	-	-	-	-	-	-	-	-	-	-	-	Coat_F
PHALIAPI_03166	224308.BSU32870	2.21e-96	281.0	COG1846@1|root,COG1846@2|Bacteria,1VEPU@1239|Firmicutes,4HPM1@91061|Bacilli,1ZIJW@1386|Bacillus	91061|Bacilli	K	Iron dependent repressor, N-terminal DNA binding domain	yusO	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_03167	224308.BSU32880	0.0	1016.0	COG0477@1|root,COG0477@2|Bacteria,1TPHW@1239|Firmicutes,4H9YA@91061|Bacilli,1ZS1D@1386|Bacillus	91061|Bacilli	P	Major facilitator superfamily	yusP	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_03168	224308.BSU32890	1.19e-84	249.0	COG1942@1|root,COG1942@2|Bacteria,1VF8N@1239|Firmicutes,4HPG0@91061|Bacilli,1ZR2J@1386|Bacillus	91061|Bacilli	S	Tautomerase enzyme	yusQ	-	-	-	-	-	-	-	-	-	-	-	Tautomerase_2
PHALIAPI_03169	1051501.AYTL01000004_gene3675	9.56e-136	389.0	COG1028@1|root,COG1028@2|Bacteria,1V05R@1239|Firmicutes,4HDCM@91061|Bacilli,1ZB06@1386|Bacillus	91061|Bacilli	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	yusR	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short,adh_short_C2
PHALIAPI_03170	224308.BSU32920	2.7e-200	556.0	COG0583@1|root,COG0583@2|Bacteria,1UCV1@1239|Firmicutes,4HE6I@91061|Bacilli,1ZQ2G@1386|Bacillus	91061|Bacilli	K	LysR substrate binding domain	gltR	-	-	ko:K21959	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
PHALIAPI_03171	224308.BSU32930	3.66e-64	195.0	2DPT3@1|root,3339Q@2|Bacteria,1VJ5A@1239|Firmicutes,4HP0F@91061|Bacilli,1ZIZE@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2573)	yusU	-	-	-	-	-	-	-	-	-	-	-	DUF2573
PHALIAPI_03172	224308.BSU32940	1.06e-196	545.0	COG1120@1|root,COG1120@2|Bacteria,1TP2Q@1239|Firmicutes,4HADG@91061|Bacilli,1ZBMI@1386|Bacillus	91061|Bacilli	HP	ABC transporter	yusV	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
PHALIAPI_03173	1051501.AYTL01000004_gene3671	2.86e-87	258.0	2EDM5@1|root,337H0@2|Bacteria,1VIIH@1239|Firmicutes,4HPCP@91061|Bacilli,1ZJFZ@1386|Bacillus	91061|Bacilli	S	YusW-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YusW
PHALIAPI_03174	1051501.AYTL01000004_gene3670	0.0	1036.0	COG1164@1|root,COG1164@2|Bacteria,1TQ5W@1239|Firmicutes,4HAN9@91061|Bacilli,1ZCRR@1386|Bacillus	91061|Bacilli	E	COG1164 Oligoendopeptidase F	pepF2	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M3,Peptidase_M3_N
PHALIAPI_03175	224308.BSU32980	4.49e-196	544.0	COG1028@1|root,COG1028@2|Bacteria,1UI3U@1239|Firmicutes,4ISCX@91061|Bacilli,1ZS7R@1386|Bacillus	91061|Bacilli	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	yusZ	-	-	-	-	-	-	-	-	-	-	-	adh_short
PHALIAPI_03176	224308.BSU32990	2.15e-104	301.0	COG0783@1|root,COG0783@2|Bacteria,1VC7X@1239|Firmicutes,4HKH8@91061|Bacilli,1ZRSG@1386|Bacillus	91061|Bacilli	P	Ferritin-like domain	fri	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
PHALIAPI_03177	224308.BSU33000	5.32e-303	829.0	COG0265@1|root,COG0265@2|Bacteria,1TRM8@1239|Firmicutes,4HA31@91061|Bacilli,1ZB6P@1386|Bacillus	91061|Bacilli	O	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain	htrA	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
PHALIAPI_03178	224308.BSU33010	1.83e-163	457.0	COG0745@1|root,COG0745@2|Bacteria,1TR8K@1239|Firmicutes,4HBSB@91061|Bacilli,1ZBX5@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	cssR	-	-	ko:K07770	ko02020,map02020	M00448	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_03179	224308.BSU33020	0.0	865.0	COG0642@1|root,COG2770@1|root,COG2205@2|Bacteria,COG2770@2|Bacteria,1TSCS@1239|Firmicutes,4HBPP@91061|Bacilli,1ZBVF@1386|Bacillus	91061|Bacilli	T	Histidine kinase	cssS	-	2.7.13.3	ko:K07650	ko02020,map02020	M00448	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA
PHALIAPI_03180	224308.BSU33030	3.06e-204	565.0	COG1309@1|root,COG1309@2|Bacteria,1UDHR@1239|Firmicutes,4HFAX@91061|Bacilli,1ZFND@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yuxN	GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_03181	224308.BSU33040	0.0	904.0	COG0114@1|root,COG0114@2|Bacteria,1UHPH@1239|Firmicutes,4HA6P@91061|Bacilli,1ZS23@1386|Bacillus	91061|Bacilli	C	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate	fumC	GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350	4.2.1.2	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	M00009,M00011,M00173,M00376	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS09430	FumaraseC_C,Lyase_1
PHALIAPI_03182	224308.BSU33049	2.6e-33	115.0	2BF37@1|root,328V9@2|Bacteria,1UB6J@1239|Firmicutes,4IMJ7@91061|Bacilli,1ZK9V@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3970)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3970
PHALIAPI_03183	224308.BSU33050	0.0	896.0	COG0697@1|root,COG0697@2|Bacteria,1TP7K@1239|Firmicutes,4HAH1@91061|Bacilli,1ZBEF@1386|Bacillus	91061|Bacilli	EG	Spore germination protein	gerAA	-	-	ko:K06288,ko:K06291,ko:K06310	-	-	-	-	ko00000	-	-	-	GerA
PHALIAPI_03184	224308.BSU33060	7.95e-251	689.0	COG0814@1|root,COG0814@2|Bacteria,1UI6P@1239|Firmicutes,4ISFP@91061|Bacilli,1ZS5H@1386|Bacillus	91061|Bacilli	E	Spore germination protein	gerAB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K06289,ko:K06292	-	-	-	-	ko00000,ko02000	2.A.3.9.1,2.A.3.9.2	-	-	Spore_permease
PHALIAPI_03185	224308.BSU33070	1.97e-239	661.0	2DFTJ@1|root,2ZT3R@2|Bacteria,1V3HD@1239|Firmicutes,4HGX9@91061|Bacilli,1ZBN5@1386|Bacillus	91061|Bacilli	S	Spore germination B3/ GerAC like, C-terminal	gerAC	-	-	ko:K06290,ko:K06293,ko:K06312	-	-	-	-	ko00000	-	-	-	Spore_GerAC
PHALIAPI_03186	224308.BSU33080	5.43e-140	396.0	COG2197@1|root,COG2197@2|Bacteria,1TQ1U@1239|Firmicutes,4HA4B@91061|Bacilli,1ZAT4@1386|Bacillus	91061|Bacilli	KT	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	vraR	-	-	ko:K07694,ko:K11618	ko02020,map02020	M00480,M00481,M00754	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	GerE,Response_reg
PHALIAPI_03187	224308.BSU33090	4.06e-246	677.0	COG4585@1|root,COG4585@2|Bacteria,1TPDG@1239|Firmicutes,4HC7E@91061|Bacilli,1ZB48@1386|Bacillus	91061|Bacilli	T	Histidine kinase	vraS	-	2.7.13.3	ko:K07681,ko:K11617	ko02020,map02020	M00480,M00481,M00754	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA_3
PHALIAPI_03188	224308.BSU33100	1.09e-163	459.0	COG4758@1|root,COG4758@2|Bacteria,1V9PN@1239|Firmicutes,4HMCU@91061|Bacilli,1ZQ0N@1386|Bacillus	91061|Bacilli	S	Cell wall-active antibiotics response 4TMS YvqF	-	-	-	ko:K11622	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	DUF2154
PHALIAPI_03189	224308.BSU33110	1.72e-173	488.0	COG3595@1|root,COG3595@2|Bacteria,1V94C@1239|Firmicutes,4HJYP@91061|Bacilli,1ZEE4@1386|Bacillus	91061|Bacilli	S	Putative adhesin	liaG	-	-	ko:K11621	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	DUF4097
PHALIAPI_03190	224308.BSU33120	2.44e-143	406.0	COG1842@1|root,COG1842@2|Bacteria,1V2MH@1239|Firmicutes,4HGD1@91061|Bacilli,1ZAR1@1386|Bacillus	91061|Bacilli	KT	COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription	liaH	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K03969,ko:K11620	ko02020,map02020	M00754	-	-	ko00000,ko00001,ko00002	-	-	-	PspA_IM30
PHALIAPI_03191	224308.BSU33130	1.51e-82	244.0	COG4758@1|root,COG4758@2|Bacteria,1UA5E@1239|Firmicutes,4IKFV@91061|Bacilli,1ZGWI@1386|Bacillus	91061|Bacilli	S	membrane	liaI	-	-	ko:K11619	ko02020,map02020	M00754	-	-	ko00000,ko00001,ko00002	-	-	-	-
PHALIAPI_03192	224308.BSU33140	1.13e-288	790.0	COG0477@1|root,COG2814@2|Bacteria,1UIYF@1239|Firmicutes,4ISX5@91061|Bacilli,1ZDQ7@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	yvqJ	-	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_03193	224308.BSU33150	5.32e-129	367.0	COG2096@1|root,COG2096@2|Bacteria,1V3PI@1239|Firmicutes,4HH26@91061|Bacilli,1ZCJ1@1386|Bacillus	91061|Bacilli	S	Adenosyltransferase	yvqK	-	2.5.1.17	ko:K00798	ko00860,ko01100,map00860,map01100	M00122	R01492,R05220,R07268	RC00533	ko00000,ko00001,ko00002,ko01000	-	-	-	Cob_adeno_trans
PHALIAPI_03194	224308.BSU33160	1.22e-307	840.0	COG1120@1|root,COG1120@2|Bacteria,1TP2Q@1239|Firmicutes,4HA28@91061|Bacilli,1ZASR@1386|Bacillus	91061|Bacilli	HP	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components	yvrA	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran,CbiZ
PHALIAPI_03195	224308.BSU33170	2.7e-236	652.0	COG0609@1|root,COG0609@2|Bacteria,1TPX6@1239|Firmicutes,4HAUK@91061|Bacilli,1ZD7V@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	btuC	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	iYO844.BSU33170	FecCD
PHALIAPI_03196	224308.BSU33180	1.41e-216	598.0	COG0614@1|root,COG0614@2|Bacteria,1TQV7@1239|Firmicutes,4HCF3@91061|Bacilli,1ZBF0@1386|Bacillus	91061|Bacilli	P	COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component	btuF	-	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	iYO844.BSU33180	Peripla_BP_2
PHALIAPI_03197	224308.BSU33190	2.12e-181	505.0	COG1028@1|root,COG1028@2|Bacteria,1TPZN@1239|Firmicutes,4HBJ8@91061|Bacilli,1ZCYQ@1386|Bacillus	91061|Bacilli	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	yvrD	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
PHALIAPI_03198	224308.BSU33200	3.64e-217	598.0	COG3386@1|root,COG3386@2|Bacteria,1V1TK@1239|Firmicutes,4HG0A@91061|Bacilli,1ZAVX@1386|Bacillus	91061|Bacilli	G	SMP-30/Gluconolaconase/LRE-like region	yvrE	GO:0003674,GO:0003824,GO:0004341,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016051,GO:0016053,GO:0016787,GO:0016788,GO:0019752,GO:0019852,GO:0019853,GO:0042364,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046872,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:1901576	-	ko:K14274	ko00040,map00040	-	R02427	RC00713	ko00000,ko00001,ko01000	-	-	-	SGL
PHALIAPI_03199	224308.BSU33210	0.0	1139.0	COG0642@1|root,COG2205@2|Bacteria,1TS12@1239|Firmicutes,4HC66@91061|Bacilli,1ZATU@1386|Bacillus	91061|Bacilli	T	Histidine kinase	yvrG	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
PHALIAPI_03200	224308.BSU33221	1.1e-170	476.0	COG0745@1|root,COG0745@2|Bacteria,1TX0Q@1239|Firmicutes,4HEF8@91061|Bacilli,1ZBAA@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	yvrH	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_03201	326423.RBAM_030360	7.2e-32	112.0	2DRUJ@1|root,33D4G@2|Bacteria,1VNFK@1239|Firmicutes,4HRTG@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	HTH_16
PHALIAPI_03202	1051501.AYTL01000004_gene3640	2.35e-126	360.0	COG1191@1|root,COG1191@2|Bacteria,1VF0Z@1239|Firmicutes,4HNZQ@91061|Bacilli,1ZESN@1386|Bacillus	91061|Bacilli	K	RNA polymerase	yvrI	-	-	ko:K03093	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r4
PHALIAPI_03203	224308.BSU33239	3.46e-26	98.2	29SDU@1|root,30DIK@2|Bacteria,1UBBR@1239|Firmicutes,4IMQN@91061|Bacilli,1ZKMF@1386|Bacillus	91061|Bacilli	S	YvrJ protein family	-	-	-	-	-	-	-	-	-	-	-	-	YvrJ
PHALIAPI_03204	224308.BSU33240	1.08e-290	792.0	COG2140@1|root,COG2140@2|Bacteria,1TPC2@1239|Firmicutes,4HA6V@91061|Bacilli,1ZF6R@1386|Bacillus	91061|Bacilli	G	Oxalate decarboxylase	oxdC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0033609,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0046564,GO:0071704	4.1.1.2	ko:K01569	ko00630,ko01100,map00630,map01100	-	R00522	RC00321	ko00000,ko00001,ko01000	-	-	iYO844.BSU18670	Cupin_1
PHALIAPI_03205	224308.BSU33250	9.89e-86	253.0	29RHZ@1|root,30CKY@2|Bacteria,1UA2J@1239|Firmicutes,4IKBU@91061|Bacilli,1ZGDA@1386|Bacillus	91061|Bacilli	S	Regulatory protein YrvL	yvrL	-	-	-	-	-	-	-	-	-	-	-	YrvL
PHALIAPI_03206	224308.BSU33260	5.57e-271	744.0	COG0577@1|root,COG0577@2|Bacteria,1TPUU@1239|Firmicutes,4HATE@91061|Bacilli,1ZDCS@1386|Bacillus	91061|Bacilli	V	COG0577 ABC-type antimicrobial peptide transport system, permease component	yvrN	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
PHALIAPI_03207	224308.BSU33270	4.64e-159	446.0	COG1136@1|root,COG1136@2|Bacteria,1TPBJ@1239|Firmicutes,4HBMF@91061|Bacilli,1ZC14@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	yvrO	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_03208	224308.BSU33280	9.86e-229	636.0	COG0845@1|root,COG0845@2|Bacteria,1V046@1239|Firmicutes,4HMJ5@91061|Bacilli,1ZQX7@1386|Bacillus	91061|Bacilli	M	Efflux transporter rnd family, mfp subunit	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	HlyD_3,HlyD_D23
PHALIAPI_03209	224308.BSU33290	2.92e-191	531.0	COG1120@1|root,COG1120@2|Bacteria,1TP2Q@1239|Firmicutes,4HADG@91061|Bacilli,1ZBMI@1386|Bacillus	91061|Bacilli	HP	ABC transporter	fhuC	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
PHALIAPI_03210	224308.BSU33300	1.12e-224	621.0	COG0609@1|root,COG0609@2|Bacteria,1TPX6@1239|Firmicutes,4HAM8@91061|Bacilli,1ZAU0@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	fhuG	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	iYO844.BSU33300	FecCD
PHALIAPI_03211	224308.BSU33310	7e-236	652.0	COG0609@1|root,COG0609@2|Bacteria,1TP13@1239|Firmicutes,4HA75@91061|Bacilli,1ZC7Z@1386|Bacillus	91061|Bacilli	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	fhuB	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071944	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
PHALIAPI_03212	224308.BSU33320	6.32e-225	620.0	COG0614@1|root,COG0614@2|Bacteria,1V2E9@1239|Firmicutes,4IPYF@91061|Bacilli,1ZREY@1386|Bacillus	91061|Bacilli	P	ABC transporter	fhuD	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
PHALIAPI_03213	224308.BSU33330	1.34e-313	857.0	COG0531@1|root,COG0531@2|Bacteria,1TSSB@1239|Firmicutes,4HA92@91061|Bacilli,1ZCJ6@1386|Bacillus	91061|Bacilli	E	Arginine ornithine antiporter	yvsH	-	-	ko:K03294,ko:K03758	-	-	-	-	ko00000,ko02000	2.A.3.2	-	iYO844.BSU33330	AA_permease_2
PHALIAPI_03214	1051501.AYTL01000004_gene3628	9.37e-23	87.4	29S4R@1|root,30D99@2|Bacteria,1UB0W@1239|Firmicutes,4IMDS@91061|Bacilli,1ZJWM@1386|Bacillus	91061|Bacilli	S	Small spore protein J (Spore_SspJ)	-	-	-	ko:K06427	-	-	-	-	ko00000	-	-	-	Spore_SspJ
PHALIAPI_03215	224308.BSU33350	2.38e-109	315.0	COG1988@1|root,COG1988@2|Bacteria,1V3QT@1239|Firmicutes,4HGYG@91061|Bacilli,1ZFRV@1386|Bacillus	91061|Bacilli	S	LexA-binding, inner membrane-associated putative hydrolase	yvsG	-	-	ko:K07038	-	-	-	-	ko00000	-	-	-	YdjM
PHALIAPI_03216	224308.BSU33360	0.0	1211.0	COG1368@1|root,COG1368@2|Bacteria,1TRMA@1239|Firmicutes,4H9S0@91061|Bacilli,1ZF0R@1386|Bacillus	91061|Bacilli	M	Belongs to the LTA synthase family	yvgJ	-	-	ko:K01138	-	-	-	-	ko00000,ko01000	-	-	-	Sulfatase
PHALIAPI_03217	224308.BSU33370	2.09e-213	590.0	COG1910@1|root,COG1910@2|Bacteria,1TRH3@1239|Firmicutes,4HAJV@91061|Bacilli,1ZC11@1386|Bacillus	91061|Bacilli	P	COG1910 Periplasmic molybdate-binding protein domain	yvgK	-	-	ko:K07219	-	-	-	-	ko00000	-	-	-	HTH_17,HTH_3,PBP_like
PHALIAPI_03218	224308.BSU33380	2.11e-175	490.0	COG0725@1|root,COG0725@2|Bacteria,1U9U3@1239|Firmicutes,4HG0Q@91061|Bacilli,1ZBKR@1386|Bacillus	91061|Bacilli	P	COG0725 ABC-type molybdate transport system, periplasmic component	modA	GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0042597,GO:0043167,GO:0043168,GO:0044464	-	ko:K02020	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	SBP_bac_11
PHALIAPI_03219	224308.BSU33390	1.74e-153	432.0	COG4149@1|root,COG4149@2|Bacteria,1TRNA@1239|Firmicutes,4HEA2@91061|Bacilli,1ZATK@1386|Bacillus	91061|Bacilli	P	COG4149 ABC-type molybdate transport system, permease component	modB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02018	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	BPD_transp_1
PHALIAPI_03220	224308.BSU33400	6.19e-201	556.0	COG0656@1|root,COG0656@2|Bacteria,1TPM1@1239|Firmicutes,4HARE@91061|Bacilli,1ZC55@1386|Bacillus	91061|Bacilli	S	reductase	yvgN	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
PHALIAPI_03221	224308.BSU33410	7.97e-113	323.0	2EKDS@1|root,33E41@2|Bacteria,1VVGE@1239|Firmicutes,4HW4S@91061|Bacilli,1ZFNW@1386|Bacillus	91061|Bacilli	-	-	yvgO	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03222	224308.BSU33420	0.0	1196.0	COG0025@1|root,COG0025@2|Bacteria,1TR4G@1239|Firmicutes,4HBJR@91061|Bacilli,1ZB41@1386|Bacillus	91061|Bacilli	P	COG0025 NhaP-type Na H and K H antiporters	yvgP	GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006873,GO:0006885,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0034220,GO:0035725,GO:0042592,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098719,GO:0098739,GO:0098771,GO:0099516,GO:0099587,GO:1902600	-	ko:K03316	-	-	-	-	ko00000	2.A.36	-	-	Na_H_Exchanger
PHALIAPI_03223	224308.BSU33430	0.0	1154.0	COG0155@1|root,COG0155@2|Bacteria,1TS58@1239|Firmicutes,4HBEX@91061|Bacilli,1ZBHT@1386|Bacillus	91061|Bacilli	P	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate	cysI	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006790,GO:0008150,GO:0008152,GO:0009337,GO:0009987,GO:0016002,GO:0016491,GO:0016667,GO:0016673,GO:0019419,GO:0032991,GO:0044237,GO:0044424,GO:0044464,GO:0050311,GO:0055114	1.8.1.2,1.8.7.1	ko:K00381,ko:K00392	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858,R00859,R03600	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	-	NIR_SIR,NIR_SIR_ferr
PHALIAPI_03224	224308.BSU33440	0.0	1176.0	COG0369@1|root,COG0369@2|Bacteria,1TP5J@1239|Firmicutes,4HCQI@91061|Bacilli,1ZANY@1386|Bacillus	91061|Bacilli	P	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component	cysJ	-	1.8.1.2	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU33440	FAD_binding_1,Flavodoxin_1,NAD_binding_1
PHALIAPI_03225	224308.BSU33450	0.0	1499.0	COG3973@1|root,COG3973@2|Bacteria,1TP39@1239|Firmicutes,4H9Y5@91061|Bacilli,1ZAWP@1386|Bacillus	91061|Bacilli	L	DNA helicase	helD	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AAA_19,UvrD-helicase,UvrD_C,UvrD_C_2
PHALIAPI_03227	224308.BSU33460	2.34e-139	394.0	COG2860@1|root,COG2860@2|Bacteria,1UH1K@1239|Firmicutes,4HDC7@91061|Bacilli,1ZBS1@1386|Bacillus	91061|Bacilli	S	membrane	yvgT	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	UPF0126
PHALIAPI_03228	224308.BSU33470	1.15e-94	276.0	COG1495@1|root,COG1495@2|Bacteria,1V79S@1239|Firmicutes,4HIKP@91061|Bacilli,1ZH0E@1386|Bacillus	91061|Bacilli	O	Required for disulfide bond formation in some proteins	bdbC	-	-	ko:K03611	-	-	-	-	ko00000,ko03110	5.A.2.1	-	-	DsbB
PHALIAPI_03229	224308.BSU33480	3.45e-137	390.0	COG1651@1|root,COG1651@2|Bacteria,1V6IC@1239|Firmicutes,4HKJU@91061|Bacilli,1ZE03@1386|Bacillus	91061|Bacilli	O	Thioredoxin	bdbD	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_4
PHALIAPI_03230	224308.BSU33490	0.0	1291.0	COG2217@1|root,COG2217@2|Bacteria,1TQ07@1239|Firmicutes,4H9SP@91061|Bacilli,1ZAPS@1386|Bacillus	91061|Bacilli	P	COG2217 Cation transport ATPase	cadA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	3.6.3.3,3.6.3.5	ko:K01534	-	-	-	-	ko00000,ko01000	3.A.3.6	-	-	E1-E2_ATPase,HMA,Hydrolase
PHALIAPI_03231	224308.BSU33500	0.0	1511.0	COG2217@1|root,COG2217@2|Bacteria,1TP5S@1239|Firmicutes,4HAI0@91061|Bacilli,1ZAVE@1386|Bacillus	91061|Bacilli	P	P-type ATPase	copA	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944	3.6.3.54	ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,HMA,Hydrolase
PHALIAPI_03232	224308.BSU33510	3.66e-41	135.0	COG2608@1|root,COG2608@2|Bacteria,1VERB@1239|Firmicutes,4HNP0@91061|Bacilli,1ZITG@1386|Bacillus	91061|Bacilli	P	Copper resistance protein CopZ	copZ	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K07213	ko04978,map04978	-	-	-	ko00000,ko00001	-	-	-	HMA
PHALIAPI_03233	224308.BSU33520	5.67e-64	195.0	COG1937@1|root,COG1937@2|Bacteria,1VEF5@1239|Firmicutes,4HKJV@91061|Bacilli,1ZQH8@1386|Bacillus	91061|Bacilli	S	transcriptional	csoR	GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	ko:K21600	-	-	-	-	ko00000,ko03000	-	-	-	Trns_repr_metal
PHALIAPI_03234	224308.BSU33530	5.38e-250	687.0	COG0673@1|root,COG0673@2|Bacteria,1TR8S@1239|Firmicutes,4HBHI@91061|Bacilli,1ZDU7@1386|Bacillus	91061|Bacilli	S	Oxidoreductase	yvaA	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0070401,GO:0070402,GO:0097159,GO:0102497,GO:1901265,GO:1901363	1.1.1.371	ko:K16044	ko00562,ko01120,map00562,map01120	-	R09954	RC00182	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
PHALIAPI_03235	224308.BSU33540	3.59e-154	432.0	COG1182@1|root,COG1182@2|Bacteria,1UZBY@1239|Firmicutes,4HB1Z@91061|Bacilli,1ZD4D@1386|Bacillus	91061|Bacilli	I	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity	azoR	-	-	ko:K01118	-	-	-	-	ko00000,ko01000	-	-	-	Flavodoxin_2
PHALIAPI_03236	224308.BSU33550	0.0	1192.0	COG1289@1|root,COG1289@2|Bacteria,1UU7Y@1239|Firmicutes,4HE9J@91061|Bacilli,1ZEB5@1386|Bacillus	91061|Bacilli	S	Fusaric acid resistance protein-like	-	-	-	-	-	-	-	-	-	-	-	-	FUSC-like,FUSC_2
PHALIAPI_03237	224308.BSU33560	2.02e-97	282.0	2A3NR@1|root,30S65@2|Bacteria,1V5EJ@1239|Firmicutes,4HHP8@91061|Bacilli,1ZQKJ@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5360)	yvaD	-	-	-	-	-	-	-	-	-	-	-	DUF5360
PHALIAPI_03238	224308.BSU33570	3.52e-71	215.0	COG2076@1|root,COG2076@2|Bacteria,1VEUF@1239|Firmicutes,4HNJX@91061|Bacilli,1ZHWT@1386|Bacillus	91061|Bacilli	P	Small Multidrug Resistance protein	yvaE	-	-	ko:K03297	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
PHALIAPI_03239	224308.BSU33580	1.17e-126	361.0	COG1309@1|root,COG1309@2|Bacteria,1V7SY@1239|Firmicutes,4HIHV@91061|Bacilli,1ZR38@1386|Bacillus	91061|Bacilli	K	Bacterial regulatory proteins, tetR family	-	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_03240	224308.BSU33590	3.96e-182	507.0	COG1028@1|root,COG1028@2|Bacteria,1TPZN@1239|Firmicutes,4HBJ8@91061|Bacilli,1ZF72@1386|Bacillus	91061|Bacilli	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	yvaG	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short
PHALIAPI_03242	224308.BSU33600	2.4e-107	309.0	COG0691@1|root,COG0691@2|Bacteria,1V3IJ@1239|Firmicutes,4HGZX@91061|Bacilli,1ZFJ0@1386|Bacillus	91061|Bacilli	O	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene	smpB	GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564	-	ko:K03664	-	-	-	-	ko00000	-	-	-	SmpB
PHALIAPI_03243	224308.BSU33610	0.0	1494.0	COG0557@1|root,COG0557@2|Bacteria,1TQ1G@1239|Firmicutes,4HBBH@91061|Bacilli,1ZBDP@1386|Bacillus	91061|Bacilli	K	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs	rnr	-	-	ko:K12573	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	OB_RNB,RNB,S1
PHALIAPI_03244	224308.BSU33620	3.43e-183	508.0	COG1647@1|root,COG1647@2|Bacteria,1TQ7X@1239|Firmicutes,4HBE6@91061|Bacilli,1ZAVD@1386|Bacillus	91061|Bacilli	S	Carboxylesterase	est	GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0008150,GO:0008152,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0044238,GO:0071704	3.1.1.1	ko:K03928	-	-	-	-	ko00000,ko01000	-	-	-	Hydrolase_4
PHALIAPI_03245	1051501.AYTL01000004_gene3595	1.87e-35	121.0	COG1314@1|root,COG1314@2|Bacteria,1VEQR@1239|Firmicutes,4HNKC@91061|Bacilli,1ZHZV@1386|Bacillus	91061|Bacilli	U	Preprotein translocase subunit SecG	secG	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0033036,GO:0034613,GO:0042886,GO:0043952,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944	-	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecG
PHALIAPI_03246	224308.BSU33640	8.15e-194	536.0	COG0596@1|root,COG0596@2|Bacteria,1V619@1239|Firmicutes,4HCRW@91061|Bacilli,1ZDX1@1386|Bacillus	91061|Bacilli	S	Serine aminopeptidase, S33	yvaM	-	1.11.1.10	ko:K00433	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_1,Hydrolase_4
PHALIAPI_03247	224308.BSU33650	3.44e-48	154.0	COG1476@1|root,COG1476@2|Bacteria,1UAIJ@1239|Firmicutes,4IKX1@91061|Bacilli,1ZI5J@1386|Bacillus	91061|Bacilli	K	transcriptional	yvzC	-	-	-	-	-	-	-	-	-	-	-	HTH_3
PHALIAPI_03248	224308.BSU33660	4.08e-92	269.0	COG1396@1|root,COG1396@2|Bacteria,1VKJA@1239|Firmicutes,4HITA@91061|Bacilli,1ZGS0@1386|Bacillus	91061|Bacilli	K	transcriptional	yvaO	-	-	ko:K22299	-	-	-	-	ko00000,ko03000	-	-	-	HTH_19,HTH_3,HTH_31
PHALIAPI_03249	224308.BSU33670	1.1e-88	261.0	COG1396@1|root,COG1396@2|Bacteria,1VKJA@1239|Firmicutes,4HITA@91061|Bacilli,1ZQBP@1386|Bacillus	91061|Bacilli	K	Cro/C1-type HTH DNA-binding domain	yvaO	-	-	ko:K22299	-	-	-	-	ko00000,ko03000	-	-	-	HTH_19,HTH_3,HTH_31
PHALIAPI_03250	224308.BSU33680	1.83e-70	212.0	COG1733@1|root,COG1733@2|Bacteria,1VBI7@1239|Firmicutes,4HKBR@91061|Bacilli,1ZH23@1386|Bacillus	91061|Bacilli	K	transcriptional	yvaP	GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	-	-	-	-	-	-	-	-	-	HxlR
PHALIAPI_03252	574376.BAMA_24735	6.21e-29	108.0	COG5428@1|root,30DFU@2|Bacteria,1UB8Y@1239|Firmicutes,4IMMP@91061|Bacilli,1ZKFQ@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2283)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2283
PHALIAPI_03254	406124.ACPC01000049_gene91	3.7e-44	160.0	COG1404@1|root,COG1404@2|Bacteria,1TQ2M@1239|Firmicutes,4HBYC@91061|Bacilli,1ZPV5@1386|Bacillus	91061|Bacilli	O	Belongs to the peptidase S8 family	-	-	-	ko:K13277	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000,ko01002,ko03110	-	-	-	Peptidase_S8,SLH
PHALIAPI_03255	224308.BSU33700	7.45e-128	366.0	COG1174@1|root,COG1174@2|Bacteria,1TQ5C@1239|Firmicutes,4HAVM@91061|Bacilli,1ZCXV@1386|Bacillus	91061|Bacilli	P	COG1174 ABC-type proline glycine betaine transport systems, permease component	opuCD	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337	-	ko:K05846	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	iYO844.BSU33800	BPD_transp_1
PHALIAPI_03256	224308.BSU33710	5.58e-219	604.0	COG1732@1|root,COG1732@2|Bacteria,1TQ7D@1239|Firmicutes,4HARV@91061|Bacilli,1ZQFN@1386|Bacillus	91061|Bacilli	M	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)	opuCC	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337	-	ko:K05845	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	iSB619.SA_RS12835	OpuAC
PHALIAPI_03257	224308.BSU33720	1.55e-142	403.0	COG1174@1|root,COG1174@2|Bacteria,1TSX8@1239|Firmicutes,4HC1D@91061|Bacilli,1ZQFM@1386|Bacillus	91061|Bacilli	P	COG1174 ABC-type proline glycine betaine transport systems, permease component	opuCB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071705,GO:0071944	-	ko:K05846	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	iYO844.BSU33720	BPD_transp_1
PHALIAPI_03258	224308.BSU33730	1.73e-269	738.0	COG0517@1|root,COG1125@1|root,COG0517@2|Bacteria,COG1125@2|Bacteria,1TPV8@1239|Firmicutes,4H9SI@91061|Bacilli,1ZBIG@1386|Bacillus	91061|Bacilli	E	COG1125 ABC-type proline glycine betaine transport systems, ATPase components	opuCA	-	-	ko:K05847	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	iSB619.SA_RS12845,iYO844.BSU33730	ABC_tran,CBS
PHALIAPI_03259	224308.BSU33740	6.63e-122	348.0	COG1510@1|root,COG1510@2|Bacteria,1V7DN@1239|Firmicutes,4HJUD@91061|Bacilli,1ZFI3@1386|Bacillus	91061|Bacilli	K	Belongs to the GbsR family	yvbF	-	-	ko:K22301	-	-	-	-	ko00000,ko03000	-	-	-	MarR_2
PHALIAPI_03260	224308.BSU33800	1.6e-135	386.0	COG1174@1|root,COG1174@2|Bacteria,1TQ5C@1239|Firmicutes,4HAVM@91061|Bacilli,1ZCXV@1386|Bacillus	91061|Bacilli	P	COG1174 ABC-type proline glycine betaine transport systems, permease component	opuCD	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337	-	ko:K05846	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	iYO844.BSU33800	BPD_transp_1
PHALIAPI_03261	224308.BSU33810	1.49e-222	613.0	COG1732@1|root,COG1732@2|Bacteria,1TQ7D@1239|Firmicutes,4HARV@91061|Bacilli,1ZQFN@1386|Bacillus	91061|Bacilli	M	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)	opuCC	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337	-	ko:K05845	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	iSB619.SA_RS12835	OpuAC
PHALIAPI_03262	224308.BSU33820	5.63e-145	409.0	COG1174@1|root,COG1174@2|Bacteria,1TSX8@1239|Firmicutes,4HC1D@91061|Bacilli,1ZQFM@1386|Bacillus	91061|Bacilli	P	COG1174 ABC-type proline glycine betaine transport systems, permease component	opuCB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071705,GO:0071944	-	ko:K05846	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	iYO844.BSU33720	BPD_transp_1
PHALIAPI_03263	224308.BSU33830	1.31e-268	736.0	COG0517@1|root,COG1125@1|root,COG0517@2|Bacteria,COG1125@2|Bacteria,1TPV8@1239|Firmicutes,4H9SI@91061|Bacilli,1ZBIG@1386|Bacillus	91061|Bacilli	E	COG1125 ABC-type proline glycine betaine transport systems, ATPase components	opuCA	-	-	ko:K05847	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	iSB619.SA_RS12845,iYO844.BSU33730	ABC_tran,CBS
PHALIAPI_03264	224308.BSU33840	8.29e-129	366.0	COG1510@1|root,COG1510@2|Bacteria,1V7DN@1239|Firmicutes,4HJUD@91061|Bacilli,1ZFI3@1386|Bacillus	91061|Bacilli	K	Belongs to the GbsR family	yvbF	-	-	ko:K22301	-	-	-	-	ko00000,ko03000	-	-	-	MarR_2
PHALIAPI_03265	224308.BSU33850	2.28e-134	382.0	COG2095@1|root,COG2095@2|Bacteria,1V81W@1239|Firmicutes,4HIUV@91061|Bacilli,1ZDG0@1386|Bacillus	91061|Bacilli	U	UPF0056 membrane protein	yvbG	-	-	ko:K05595	-	-	-	-	ko00000,ko02000	2.A.95.1	-	-	MarC
PHALIAPI_03266	224308.BSU33860	8.48e-145	408.0	28IW6@1|root,2Z8UG@2|Bacteria,1TSGG@1239|Firmicutes,4HCTI@91061|Bacilli,1ZBNE@1386|Bacillus	91061|Bacilli	S	YvbH-like oligomerisation region	yvbH	-	-	-	-	-	-	-	-	-	-	-	YvbH_ext,bPH_1
PHALIAPI_03267	224308.BSU33870	2.55e-153	432.0	COG3064@1|root,COG3064@2|Bacteria,1VK5M@1239|Firmicutes,4HIHS@91061|Bacilli	91061|Bacilli	M	Membrane	yvbI	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03268	224308.BSU33880	0.0	1152.0	COG4640@1|root,COG4640@2|Bacteria,1UYJN@1239|Firmicutes,4HF8I@91061|Bacilli,1ZCS9@1386|Bacillus	91061|Bacilli	S	response to antibiotic	tcaA	-	-	ko:K21463	-	-	-	-	ko00000	-	-	-	zf-ribbon_3,zinc_ribbon_2
PHALIAPI_03269	224308.BSU33890	8.03e-105	303.0	COG0454@1|root,COG0456@2|Bacteria,1V3IC@1239|Firmicutes,4HH45@91061|Bacilli,1ZGDE@1386|Bacillus	91061|Bacilli	K	acetyltransferase	yvbK	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,Acetyltransf_7
PHALIAPI_03270	326423.RBAM_031160	5.68e-221	617.0	COG0477@1|root,COG2814@2|Bacteria	2|Bacteria	EGP	Major facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_3
PHALIAPI_03271	326423.RBAM_031170	1.25e-192	537.0	2F5JR@1|root,33Y4Z@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03272	720555.BATR1942_14890	3.24e-148	418.0	COG2120@1|root,COG2120@2|Bacteria,1UZDV@1239|Firmicutes,4HE79@91061|Bacilli,1ZF1S@1386|Bacillus	91061|Bacilli	S	GlcNAc-PI de-N-acetylase	-	-	-	-	-	-	-	-	-	-	-	-	PIG-L
PHALIAPI_03273	720555.BATR1942_14895	8.28e-157	442.0	COG0224@1|root,COG0224@2|Bacteria,1UJD7@1239|Firmicutes	1239|Firmicutes	C	WbqC-like protein family	-	-	-	-	-	-	-	-	-	-	-	-	WbqC
PHALIAPI_03274	326423.RBAM_031200	7.3e-144	410.0	COG5653@1|root,COG5653@2|Bacteria	2|Bacteria	M	Protein involved in cellulose biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
PHALIAPI_03275	326423.RBAM_031210	4.91e-198	560.0	COG0399@1|root,COG0399@2|Bacteria	2|Bacteria	E	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	-	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1,Y2_Tnp
PHALIAPI_03276	326423.RBAM_031220	4.28e-188	526.0	COG0451@1|root,COG0451@2|Bacteria,1TS59@1239|Firmicutes,4HAY0@91061|Bacilli,1ZF5A@1386|Bacillus	91061|Bacilli	M	GDP-mannose 4,6 dehydratase	arnA	-	4.2.1.46,5.1.3.2	ko:K01710,ko:K01784	ko00052,ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00052,map00520,map00521,map00523,map00525,map01055,map01100,map01130	M00361,M00362,M00632,M00793	R00291,R02984,R06513	RC00289,RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
PHALIAPI_03277	326423.RBAM_031230	3.75e-234	648.0	COG0399@1|root,COG0399@2|Bacteria,1TPDH@1239|Firmicutes,4HDN8@91061|Bacilli,1ZQW8@1386|Bacillus	91061|Bacilli	E	Belongs to the DegT DnrJ EryC1 family	-	-	2.6.1.102	ko:K13010	ko00520,map00520	-	R10460	RC00006,RC00781	ko00000,ko00001,ko01000,ko01005,ko01007	-	-	-	DegT_DnrJ_EryC1
PHALIAPI_03278	720555.BATR1942_14920	1.58e-274	756.0	COG0677@1|root,COG0677@2|Bacteria,1TPXY@1239|Firmicutes,4HAFY@91061|Bacilli,1ZDXJ@1386|Bacillus	91061|Bacilli	M	UDP binding domain	-	-	1.1.1.136	ko:K13015	ko00520,map00520	-	R00421	RC00291	ko00000,ko00001,ko01000,ko01005	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
PHALIAPI_03279	720555.BATR1942_14925	8.59e-209	588.0	COG2234@1|root,COG2234@2|Bacteria,1UFM1@1239|Firmicutes,4HBE5@91061|Bacilli,1ZC0A@1386|Bacillus	91061|Bacilli	S	PA domain	ywaD	-	3.4.11.10,3.4.11.6	ko:K19701	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PA,Peptidase_M28
PHALIAPI_03280	224308.BSU33900	1.38e-309	843.0	COG0148@1|root,COG0148@2|Bacteria,1TP2S@1239|Firmicutes,4HAKI@91061|Bacilli,1ZAZB@1386|Bacillus	91061|Bacilli	G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	GO:0001968,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005518,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030312,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035375,GO:0042866,GO:0043236,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0044877,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050840,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
PHALIAPI_03281	224308.BSU33910	0.0	1024.0	COG0696@1|root,COG0696@2|Bacteria,1TPM4@1239|Firmicutes,4HBTQ@91061|Bacilli,1ZAPE@1386|Bacillus	91061|Bacilli	G	Catalyzes the interconversion of 2-phosphoglycerate and	gpmI	GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050789,GO:0050793,GO:0051186,GO:0051188,GO:0055086,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576	5.4.2.12	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000	-	-	-	Metalloenzyme,Phosphodiest,iPGM_N
PHALIAPI_03282	224308.BSU33920	2.12e-176	492.0	COG0149@1|root,COG0149@2|Bacteria,1TP2F@1239|Firmicutes,4HAPT@91061|Bacilli,1ZB6N@1386|Bacillus	91061|Bacilli	G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)	tpiA	GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616	5.3.1.1	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01015	RC00423	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	TIM
PHALIAPI_03283	224308.BSU33930	1.97e-277	759.0	COG0126@1|root,COG0126@2|Bacteria,1TP3H@1239|Firmicutes,4H9R3@91061|Bacilli,1ZCXW@1386|Bacillus	91061|Bacilli	F	Belongs to the phosphoglycerate kinase family	pgk	GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065	2.7.2.3	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01512	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	iSB619.SA_RS04145	PGK
PHALIAPI_03284	224308.BSU33940	5.72e-238	654.0	COG0057@1|root,COG0057@2|Bacteria,1TNYU@1239|Firmicutes,4H9NS@91061|Bacilli,1ZCF9@1386|Bacillus	91061|Bacilli	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family	gapA	GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	Gp_dh_C,Gp_dh_N
PHALIAPI_03285	224308.BSU33950	2.42e-237	653.0	COG2390@1|root,COG2390@2|Bacteria,1TP62@1239|Firmicutes,4HAE6@91061|Bacilli,1ZBYA@1386|Bacillus	91061|Bacilli	K	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain	cggR	-	-	ko:K05311	-	-	-	-	ko00000,ko03000	-	-	-	Sugar-bind
PHALIAPI_03286	224308.BSU33960	0.0	887.0	COG0477@1|root,COG2814@2|Bacteria,1TREV@1239|Firmicutes,4HAN1@91061|Bacilli,1ZAUM@1386|Bacillus	91061|Bacilli	U	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	araE	GO:0003674,GO:0005215,GO:0005351,GO:0005402,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034219,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600	-	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	-	-	-	ko00000,ko00001,ko02000	2.A.1.1,2.A.1.1.2,2.A.1.1.26	-	-	Sugar_tr
PHALIAPI_03287	224308.BSU33970	4.32e-258	707.0	COG1609@1|root,COG1609@2|Bacteria,1TP9Q@1239|Firmicutes,4HARD@91061|Bacilli,1ZBZA@1386|Bacillus	91061|Bacilli	K	transcriptional	araR	-	-	ko:K02103	-	-	-	-	ko00000,ko03000	-	-	-	GntR,Peripla_BP_3
PHALIAPI_03288	224308.BSU33980	8.53e-245	672.0	COG2141@1|root,COG2141@2|Bacteria,1TQWJ@1239|Firmicutes,4HBMR@91061|Bacilli,1ZAPR@1386|Bacillus	91061|Bacilli	C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	yvbT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
PHALIAPI_03289	224308.BSU33990	8.12e-205	567.0	COG0583@1|root,COG0583@2|Bacteria,1V275@1239|Firmicutes,4HK7I@91061|Bacilli,1ZDKT@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yvbU	GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363,GO:1990837	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
PHALIAPI_03290	224308.BSU34000	2.27e-197	549.0	COG0697@1|root,COG0697@2|Bacteria,1TRJZ@1239|Firmicutes,4HDJI@91061|Bacilli,1ZCMU@1386|Bacillus	91061|Bacilli	EG	EamA-like transporter family	yvbV	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_03291	224308.BSU34010	7.07e-307	838.0	COG1113@1|root,COG1113@2|Bacteria,1TP97@1239|Firmicutes,4H9QX@91061|Bacilli,1ZS14@1386|Bacillus	91061|Bacilli	E	COG1113 Gamma-aminobutyrate permease and related permeases	yvbW	-	-	ko:K03293	-	-	-	-	ko00000	2.A.3.1	-	-	AA_permease
PHALIAPI_03292	224308.BSU34020	1.22e-248	682.0	COG3858@1|root,COG3858@2|Bacteria,1UY7M@1239|Firmicutes,4HDBG@91061|Bacilli,1ZREZ@1386|Bacillus	91061|Bacilli	S	Glycosyl hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_18
PHALIAPI_03293	224308.BSU34030	5.65e-170	474.0	COG1556@1|root,COG1556@2|Bacteria,1UZAK@1239|Firmicutes,4HH3R@91061|Bacilli,1ZCX9@1386|Bacillus	91061|Bacilli	S	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source	lutC	-	-	ko:K00782	-	-	-	-	ko00000	-	-	-	LUD_dom
PHALIAPI_03294	224308.BSU34040	0.0	942.0	COG1139@1|root,COG1139@2|Bacteria,1TREQ@1239|Firmicutes,4H9UI@91061|Bacilli,1ZCJB@1386|Bacillus	91061|Bacilli	C	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate	lutB	-	-	ko:K18929	-	-	-	-	ko00000	-	-	-	DUF3390,Fer4_8,LUD_dom
PHALIAPI_03295	224308.BSU34050	1.76e-172	481.0	COG0247@1|root,COG0247@2|Bacteria,1TPFC@1239|Firmicutes,4HAKC@91061|Bacilli,1ZCUT@1386|Bacillus	91061|Bacilli	C	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source	lutA	-	-	ko:K18928	-	-	-	-	ko00000	-	-	-	CCG
PHALIAPI_03296	224308.BSU34060	4.36e-136	385.0	COG2197@1|root,COG2197@2|Bacteria,1TVTF@1239|Firmicutes,4HAJW@91061|Bacilli,1ZC1V@1386|Bacillus	91061|Bacilli	T	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	desR	-	-	ko:K02479,ko:K07693	ko02020,map02020	M00479	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	GerE,Response_reg
PHALIAPI_03297	224308.BSU34070	3.25e-253	696.0	COG4585@1|root,COG4585@2|Bacteria,1UXXW@1239|Firmicutes,4HCS6@91061|Bacilli,1ZPXJ@1386|Bacillus	91061|Bacilli	T	Histidine kinase	yvfT	-	2.7.13.3	ko:K07778	ko02020,map02020	M00479	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA_3
PHALIAPI_03298	224308.BSU34080	1.68e-169	474.0	COG0842@1|root,COG0842@2|Bacteria,1V7QG@1239|Firmicutes,4HFU4@91061|Bacilli,1ZD2I@1386|Bacillus	91061|Bacilli	V	COG0842 ABC-type multidrug transport system, permease component	XK27_09830	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane,ABC2_membrane_3
PHALIAPI_03299	224308.BSU34090	3.16e-204	566.0	COG1131@1|root,COG1131@2|Bacteria,1TRM5@1239|Firmicutes,4HFBN@91061|Bacilli,1ZCK0@1386|Bacillus	91061|Bacilli	V	COG1131 ABC-type multidrug transport system, ATPase component	yvfR	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_03300	224308.BSU34100	8.47e-200	552.0	COG0596@1|root,COG0596@2|Bacteria,1TREC@1239|Firmicutes,4HAPB@91061|Bacilli,1ZDQB@1386|Bacillus	91061|Bacilli	S	Alpha/beta hydrolase family	rsbQ	-	-	ko:K19707	-	-	-	-	ko00000,ko03021	-	-	-	Abhydrolase_1,Abhydrolase_6
PHALIAPI_03301	224308.BSU34110	3.8e-259	714.0	COG2208@1|root,COG2208@2|Bacteria,1TS3B@1239|Firmicutes,4HCRR@91061|Bacilli,1ZBBE@1386|Bacillus	91061|Bacilli	T	response regulator	-	-	3.1.3.3	ko:K07315	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	PAS,PAS_9,SpoIIE
PHALIAPI_03302	224308.BSU34120	0.0	866.0	COG3867@1|root,COG3867@2|Bacteria,1TQDZ@1239|Firmicutes,4HBYA@91061|Bacilli,1ZBZ2@1386|Bacillus	91061|Bacilli	G	arabinogalactan	ganB	-	3.2.1.89	ko:K01224	-	-	-	-	ko00000,ko01000	-	-	-	Big_4,Glyco_hydro_53,Gram_pos_anchor,SLH
PHALIAPI_03303	224308.BSU34130	0.0	1420.0	COG1874@1|root,COG1874@2|Bacteria,1TQN6@1239|Firmicutes,4HARI@91061|Bacilli,1ZCHT@1386|Bacillus	91061|Bacilli	G	beta-galactosidase	lacA	-	3.2.1.23	ko:K12308	ko00052,map00052	-	R01105	RC00452	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_42,Glyco_hydro_42C,Glyco_hydro_42M
PHALIAPI_03304	224308.BSU34140	7.72e-194	538.0	COG3833@1|root,COG3833@2|Bacteria,1TRB7@1239|Firmicutes,4HC5K@91061|Bacilli,1ZB5C@1386|Bacillus	91061|Bacilli	P	transport	malG	GO:0003674,GO:0003824,GO:0005215,GO:0005363,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015154,GO:0015157,GO:0015399,GO:0015405,GO:0015422,GO:0015423,GO:0015766,GO:0015768,GO:0015772,GO:0015774,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0033037,GO:0034219,GO:0042623,GO:0042626,GO:0042956,GO:0043211,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702	-	ko:K15772	ko02010,map02010	M00491	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.16,3.A.1.1.2	-	-	BPD_transp_1
PHALIAPI_03305	224308.BSU34150	2.15e-300	819.0	COG1175@1|root,COG1175@2|Bacteria,1TR2A@1239|Firmicutes,4HB8H@91061|Bacilli,1ZBHD@1386|Bacillus	91061|Bacilli	P	COG1175 ABC-type sugar transport systems, permease components	malC	GO:0003674,GO:0003824,GO:0005215,GO:0005363,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015154,GO:0015157,GO:0015399,GO:0015405,GO:0015422,GO:0015423,GO:0015766,GO:0015768,GO:0015772,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034219,GO:0042623,GO:0042626,GO:0043190,GO:0043211,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990060,GO:1990351	-	ko:K15771	ko02010,map02010	M00491	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.16,3.A.1.1.2	-	iYO844.BSU34150	BPD_transp_1
PHALIAPI_03306	224308.BSU34160	6.57e-292	798.0	COG2182@1|root,COG2182@2|Bacteria,1TPU9@1239|Firmicutes,4HBHE@91061|Bacilli,1ZBWG@1386|Bacillus	91061|Bacilli	G	COG2182 Maltose-binding periplasmic proteins domains	cycB	-	-	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	M00207,M00491,M00599	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.38	-	iYO844.BSU34610	SBP_bac_8
PHALIAPI_03307	224308.BSU34170	8.12e-236	649.0	COG1609@1|root,COG1609@2|Bacteria,1TPZJ@1239|Firmicutes,4HC9Z@91061|Bacilli,1ZD8J@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	lacR	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
PHALIAPI_03308	1051501.AYTL01000004_gene3544	6.85e-146	414.0	COG2186@1|root,COG2186@2|Bacteria,1V2TU@1239|Firmicutes,4HDHI@91061|Bacilli,1ZD1T@1386|Bacillus	91061|Bacilli	K	COG2186 Transcriptional regulators	yvfI	-	-	ko:K05799	-	-	-	-	ko00000,ko03000	-	-	-	FCD,GntR
PHALIAPI_03309	224308.BSU34190	0.0	1067.0	COG1620@1|root,COG1620@2|Bacteria,1TQNM@1239|Firmicutes,4HAF3@91061|Bacilli,1ZC0U@1386|Bacillus	91061|Bacilli	C	L-lactate permease	lctP	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03303	-	-	-	-	ko00000,ko02000	2.A.14	-	-	Lactate_perm
PHALIAPI_03310	224308.BSU34200	4.75e-304	830.0	COG1508@1|root,COG1508@2|Bacteria,1TQ0H@1239|Firmicutes,4HA8T@91061|Bacilli,1ZBKU@1386|Bacillus	91061|Bacilli	K	COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog	rpoN	-	-	ko:K03092	ko02020,ko05111,map02020,map05111	-	-	-	ko00000,ko00001,ko03021	-	-	-	Sigma54_AID,Sigma54_CBD,Sigma54_DBD
PHALIAPI_03311	224308.BSU34210	5.69e-44	142.0	2EM15@1|root,33EQP@2|Bacteria,1VN1G@1239|Firmicutes,4HSEP@91061|Bacilli,1ZI1T@1386|Bacillus	91061|Bacilli	S	YvfG protein	yvfG	-	-	-	-	-	-	-	-	-	-	-	YvfG
PHALIAPI_03312	224308.BSU34220	1.99e-236	649.0	COG5039@1|root,COG5039@2|Bacteria,1V5MK@1239|Firmicutes,4HJ1D@91061|Bacilli	91061|Bacilli	GM	Exopolysaccharide biosynthesis protein	epsO	-	-	ko:K19431	-	-	-	-	ko00000,ko01000	-	-	-	PS_pyruv_trans
PHALIAPI_03313	224308.BSU34230	8.34e-276	754.0	COG0399@1|root,COG0399@2|Bacteria,1TPDH@1239|Firmicutes,4HBZ8@91061|Bacilli,1ZCTS@1386|Bacillus	91061|Bacilli	E	Belongs to the DegT DnrJ EryC1 family	epsN	-	-	ko:K19430	-	-	-	-	ko00000,ko01000	-	-	-	DegT_DnrJ_EryC1
PHALIAPI_03314	720555.BATR1942_15045	7.65e-79	242.0	COG0110@1|root,COG0110@2|Bacteria,1V8CV@1239|Firmicutes,4HJ0P@91061|Bacilli,1ZGBH@1386|Bacillus	91061|Bacilli	GM	COG0110 Acetyltransferase (isoleucine patch superfamily)	epsM	GO:0003674,GO:0003824,GO:0008374,GO:0016740,GO:0016746,GO:0016747	-	ko:K19429	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep
PHALIAPI_03315	224308.BSU34250	9.14e-139	392.0	COG2148@1|root,COG2148@2|Bacteria,1TP49@1239|Firmicutes,4HFZV@91061|Bacilli,1ZC89@1386|Bacillus	91061|Bacilli	M	COG2148 Sugar transferases involved in lipopolysaccharide synthesis	epsL	GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0016740,GO:0016772,GO:0016780,GO:0043170,GO:0044238,GO:0071704	-	ko:K13012,ko:K19428	-	-	-	-	ko00000,ko01000,ko01005	-	-	-	Bac_transf
PHALIAPI_03316	224308.BSU34265	0.0	921.0	COG2244@1|root,COG2244@2|Bacteria,1TQBD@1239|Firmicutes,4HTU0@91061|Bacilli,1ZAXV@1386|Bacillus	91061|Bacilli	S	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid	epsK	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K19418	-	-	-	-	ko00000,ko02000	-	-	-	Polysacc_synt,Polysacc_synt_C
PHALIAPI_03317	224308.BSU34280	1.53e-242	667.0	COG1216@1|root,COG1216@2|Bacteria,1VATJ@1239|Firmicutes,4HCW0@91061|Bacilli,1ZFI5@1386|Bacillus	91061|Bacilli	S	COG0463 Glycosyltransferases involved in cell wall biogenesis	epsJ	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	ko:K19427	-	-	-	-	ko00000,ko01000	-	GT2	-	Glycos_transf_2
PHALIAPI_03318	224308.BSU34290	1.1e-258	709.0	COG5039@1|root,COG5039@2|Bacteria,1V5MK@1239|Firmicutes,4HJ1D@91061|Bacilli,1ZEEK@1386|Bacillus	91061|Bacilli	GM	pyruvyl transferase	epsI	-	-	ko:K19426	-	-	-	-	ko00000,ko01000	-	-	-	PS_pyruv_trans
PHALIAPI_03319	224308.BSU34300	1.17e-246	677.0	COG1216@1|root,COG1216@2|Bacteria,1VJX3@1239|Firmicutes,4HWYT@91061|Bacilli,1ZDMT@1386|Bacillus	91061|Bacilli	S	Glycosyltransferase like family 2	epsH	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	ko:K19425	-	-	-	-	ko00000,ko01000,ko01003	-	GT2	-	Glycos_transf_2
PHALIAPI_03320	224308.BSU34310	2.08e-263	721.0	2DP3I@1|root,330DE@2|Bacteria,1UPRV@1239|Firmicutes,4HS3P@91061|Bacilli,1ZSJX@1386|Bacillus	91061|Bacilli	S	EpsG family	epsG	-	-	ko:K19419	-	-	-	-	ko00000,ko02000	9.B.183.1.9	-	-	EpsG
PHALIAPI_03321	224308.BSU34320	2.4e-276	756.0	COG0438@1|root,COG0438@2|Bacteria,1TRCM@1239|Firmicutes,4HC0S@91061|Bacilli,1ZEMI@1386|Bacillus	91061|Bacilli	M	Glycosyl transferases group 1	epsF	GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016758	-	ko:K19424	-	-	-	-	ko00000,ko01000,ko01003	-	GT4	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
PHALIAPI_03322	224308.BSU34330	1.46e-200	555.0	COG1215@1|root,COG1215@2|Bacteria,1UZRX@1239|Firmicutes,4HGN8@91061|Bacilli,1ZEKC@1386|Bacillus	91061|Bacilli	M	COG0463 Glycosyltransferases involved in cell wall biogenesis	epsE	-	-	ko:K19423	-	-	-	-	ko00000,ko01000,ko01003	-	GT2	-	Glycos_transf_2
PHALIAPI_03323	224308.BSU34340	5.25e-280	764.0	COG0438@1|root,COG0438@2|Bacteria,1TPY6@1239|Firmicutes,4HCN6@91061|Bacilli,1ZD2Y@1386|Bacillus	91061|Bacilli	M	Glycosyl transferase 4-like	epsD	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	ko:K19422	-	-	-	-	ko00000,ko01000	-	GT4	-	Glyco_trans_4_2,Glyco_transf_4,Glycos_transf_1
PHALIAPI_03324	224308.BSU34350	0.0	1159.0	COG1086@1|root,COG1086@2|Bacteria,1TR3W@1239|Firmicutes,4HAER@91061|Bacilli,1ZB9K@1386|Bacillus	91061|Bacilli	GM	Polysaccharide biosynthesis protein	capD	GO:0008150,GO:0043900,GO:0043902,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:1900190,GO:1900192	-	ko:K19421	-	-	-	-	ko00000	-	-	-	CoA_binding_3,Polysacc_synt_2
PHALIAPI_03325	224308.BSU34360	7.94e-150	422.0	COG0489@1|root,COG0489@2|Bacteria,1TS4R@1239|Firmicutes,4HCEN@91061|Bacilli,1ZB83@1386|Bacillus	91061|Bacilli	D	COG0489 ATPases involved in chromosome partitioning	ywqD	-	2.7.10.2	ko:K00903	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	AAA_31,ParA
PHALIAPI_03326	224308.BSU34370	2.78e-158	444.0	COG3944@1|root,COG3944@2|Bacteria,1UZCR@1239|Firmicutes,4HE26@91061|Bacilli,1ZBJ4@1386|Bacillus	91061|Bacilli	M	biosynthesis protein	epsA	-	-	ko:K19420	-	-	-	-	ko00000	-	-	-	GNVR,Wzz
PHALIAPI_03327	224308.BSU34380	4.17e-97	283.0	COG1396@1|root,COG1396@2|Bacteria,1VAXE@1239|Firmicutes,4HKHB@91061|Bacilli,1ZFHM@1386|Bacillus	91061|Bacilli	K	transcriptional	-	-	-	ko:K19417	-	-	-	-	ko00000,ko03000	-	-	-	HTH_3,SinI
PHALIAPI_03328	224308.BSU34390	0.0	952.0	COG2272@1|root,COG2272@2|Bacteria,1UXY5@1239|Firmicutes,4HCKV@91061|Bacilli,1ZEEU@1386|Bacillus	91061|Bacilli	I	Belongs to the type-B carboxylesterase lipase family	pnbA	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
PHALIAPI_03330	224308.BSU34400	8.97e-119	338.0	COG3479@1|root,COG3479@2|Bacteria,1UY0X@1239|Firmicutes,4HAN3@91061|Bacilli,1ZF2A@1386|Bacillus	91061|Bacilli	Q	Phenolic acid decarboxylase	padC	-	-	ko:K13727	-	-	-	-	ko00000,ko01000	-	-	-	PA_decarbox
PHALIAPI_03331	1051501.AYTL01000004_gene3521	4.48e-96	281.0	2DMP1@1|root,32SS8@2|Bacteria,1VFZZ@1239|Firmicutes,4HX01@91061|Bacilli,1ZJV7@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3237)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3237
PHALIAPI_03332	224308.BSU34430	1.1e-156	440.0	COG1794@1|root,COG1794@2|Bacteria,1V1BP@1239|Firmicutes,4HFX8@91061|Bacilli,1ZQCX@1386|Bacillus	91061|Bacilli	M	Belongs to the aspartate glutamate racemases family	racX	-	5.1.1.13	ko:K01779	ko00250,ko01054,map00250,map01054	-	R00491	RC00302	ko00000,ko00001,ko01000	-	-	-	Asp_Glu_race
PHALIAPI_03333	224308.BSU34440	0.0	870.0	COG1680@1|root,COG1680@2|Bacteria,1UZUZ@1239|Firmicutes,4IPQ5@91061|Bacilli,1ZG0V@1386|Bacillus	91061|Bacilli	V	Beta-lactamase	pbpE	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
PHALIAPI_03334	720555.BATR1942_15130	1.22e-90	270.0	2E6XN@1|root,331GZ@2|Bacteria,1VGPQ@1239|Firmicutes,4HQH8@91061|Bacilli,1ZI8H@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	C1q
PHALIAPI_03335	224308.BSU34450	0.0	951.0	COG1621@1|root,COG1621@2|Bacteria,1TR8C@1239|Firmicutes,4HBYU@91061|Bacilli,1ZBRC@1386|Bacillus	91061|Bacilli	M	levansucrase activity	sacB	GO:0005575,GO:0005576	2.4.1.10,2.4.1.9	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	-	R04194,R05140	RC00077,RC00247	ko00000,ko00001,ko01000,ko01003	-	GH68	-	Glyco_hydro_68,Gram_pos_anchor,SH3_8
PHALIAPI_03336	224308.BSU34460	0.0	1068.0	COG1621@1|root,COG1621@2|Bacteria,1TPAE@1239|Firmicutes,4H9Y7@91061|Bacilli,1ZE06@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 32 family	sacC3	GO:0003674,GO:0003824,GO:0004553,GO:0004564,GO:0005975,GO:0005984,GO:0005985,GO:0005987,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016052,GO:0016787,GO:0016798,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0046352,GO:0071704,GO:1901575	3.2.1.65	ko:K01212	ko00500,map00500	-	R05624,R11311	RC03278	ko00000,ko00001,ko01000	-	GH32	-	Glyco_hydro_32C,Glyco_hydro_32N
PHALIAPI_03337	224308.BSU34470	0.0	1023.0	COG0531@1|root,COG0531@2|Bacteria,1TPJH@1239|Firmicutes,4HC13@91061|Bacilli,1ZCG6@1386|Bacillus	91061|Bacilli	E	amino acid	ybeC	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039	-	-	-	-	-	-	-	-	-	-	AA_permease_2
PHALIAPI_03338	224308.BSU34480	2.75e-136	385.0	COG1309@1|root,COG1309@2|Bacteria,1V4J3@1239|Firmicutes,4HHPI@91061|Bacilli,1ZG5D@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yvdT_1	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_C_4,TetR_N
PHALIAPI_03339	224308.BSU34490	7.37e-67	203.0	COG2076@1|root,COG2076@2|Bacteria,1VA4Z@1239|Firmicutes,4HKVF@91061|Bacilli,1ZIHS@1386|Bacillus	91061|Bacilli	P	Small Multidrug Resistance protein	yvdS	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046618,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K18924	-	M00712	-	-	ko00000,ko00002,ko02000	2.A.7.1.5	-	-	Multi_Drug_Res
PHALIAPI_03340	224308.BSU34500	4.21e-66	201.0	COG2076@1|root,COG2076@2|Bacteria,1VE2R@1239|Firmicutes,4HKJB@91061|Bacilli,1ZIIC@1386|Bacillus	91061|Bacilli	P	Small Multidrug Resistance protein	yvdR	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046618,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K11741	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
PHALIAPI_03341	224308.BSU34510	1.3e-120	344.0	2DBXC@1|root,2ZBP3@2|Bacteria,1V1I2@1239|Firmicutes,4HB52@91061|Bacilli,1ZFJV@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3231)	yvdQ	-	-	-	-	-	-	-	-	-	-	-	DUF3231
PHALIAPI_03342	1285586.H131_03124	4.27e-95	295.0	COG2367@1|root,COG2367@2|Bacteria,1V2JD@1239|Firmicutes,4ICY0@91061|Bacilli,3IYHG@400634|Lysinibacillus	91061|Bacilli	V	Beta-lactamase enzyme family	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase2
PHALIAPI_03343	1052684.PPM_3687	1.51e-113	348.0	COG3011@1|root,COG3011@2|Bacteria,1V3RN@1239|Firmicutes,4HH7R@91061|Bacilli,26VVM@186822|Paenibacillaceae	91061|Bacilli	S	Vitamin K-dependent gamma-carboxylase	sdpB	-	-	-	-	-	-	-	-	-	-	-	DUF393,VKG_Carbox
PHALIAPI_03344	1308866.J416_11000	4.88e-47	162.0	29YU6@1|root,30KQJ@2|Bacteria,1U330@1239|Firmicutes,4ICT7@91061|Bacilli,471Z5@74385|Gracilibacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03348	224308.BSU34540	8.17e-135	382.0	COG0740@1|root,COG0740@2|Bacteria,1TQ91@1239|Firmicutes,4HA8J@91061|Bacilli,1ZARS@1386|Bacillus	91061|Bacilli	OU	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	clpP	GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
PHALIAPI_03349	224308.BSU34550	2.08e-144	409.0	COG0637@1|root,COG0637@2|Bacteria,1V389@1239|Firmicutes,4HGHQ@91061|Bacilli,1ZQ74@1386|Bacillus	91061|Bacilli	S	Haloacid dehalogenase-like hydrolase	pgmB	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0008150,GO:0008152,GO:0008801,GO:0016853,GO:0016866,GO:0016868,GO:0043167,GO:0043169,GO:0044238,GO:0046872,GO:0071704	5.4.2.6	ko:K01838	ko00500,map00500	-	R02728,R11310	RC00408	ko00000,ko00001,ko01000	-	-	-	HAD_2
PHALIAPI_03350	224308.BSU34560	0.0	1170.0	COG0366@1|root,COG0366@2|Bacteria,1TP53@1239|Firmicutes,4HA1G@91061|Bacilli,1ZASC@1386|Bacillus	91061|Bacilli	G	COG0366 Glycosidases	malL	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.2.1.10	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00801,R01718,R01791,R06199	RC00028,RC00059,RC00077,RC00451	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,DUF3459,Malt_amylase_C
PHALIAPI_03351	224308.BSU34570	0.0	1533.0	COG1554@1|root,COG1554@2|Bacteria,1TQMB@1239|Firmicutes,4HAVB@91061|Bacilli,1ZBSM@1386|Bacillus	91061|Bacilli	G	Glycoside hydrolase, family 65	yvdK	GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0016787,GO:0030312,GO:0044464,GO:0071944	2.4.1.8	ko:K00691	ko00500,ko01100,map00500,map01100	-	R01555	RC00049	ko00000,ko00001,ko01000	-	GH65	-	Glyco_hydro_65C,Glyco_hydro_65N,Glyco_hydro_65m
PHALIAPI_03352	224308.BSU34580	2.5e-200	556.0	COG5521@1|root,COG5521@2|Bacteria,1V7S4@1239|Firmicutes,4HJ3V@91061|Bacilli,1ZF9A@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1189)	malA	-	-	-	-	-	-	-	-	-	-	-	DUF1189
PHALIAPI_03353	224308.BSU34590	6.56e-188	523.0	COG3833@1|root,COG3833@2|Bacteria,1TRB7@1239|Firmicutes,4HC5K@91061|Bacilli,1ZB5C@1386|Bacillus	91061|Bacilli	P	transport	malD	GO:0003674,GO:0003824,GO:0005215,GO:0005363,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015154,GO:0015157,GO:0015399,GO:0015405,GO:0015422,GO:0015423,GO:0015766,GO:0015768,GO:0015772,GO:0015774,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0033037,GO:0034219,GO:0042623,GO:0042626,GO:0042956,GO:0043211,GO:0043492,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944	-	ko:K15772	ko02010,map02010	M00491	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.16,3.A.1.1.2	-	-	BPD_transp_1
PHALIAPI_03354	224308.BSU34600	1.01e-309	844.0	COG1175@1|root,COG1175@2|Bacteria,1TR2A@1239|Firmicutes,4HB8H@91061|Bacilli,1ZBHD@1386|Bacillus	91061|Bacilli	P	COG1175 ABC-type sugar transport systems, permease components	malC	GO:0003674,GO:0003824,GO:0005215,GO:0005363,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015154,GO:0015157,GO:0015399,GO:0015405,GO:0015422,GO:0015423,GO:0015766,GO:0015768,GO:0015772,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034219,GO:0042623,GO:0042626,GO:0043190,GO:0043211,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990060,GO:1990351	-	ko:K15771	ko02010,map02010	M00491	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.16,3.A.1.1.2	-	iYO844.BSU34150	BPD_transp_1
PHALIAPI_03355	224308.BSU34610	2.83e-300	819.0	COG2182@1|root,COG2182@2|Bacteria,1TPU9@1239|Firmicutes,4HBHE@91061|Bacilli,1ZBWG@1386|Bacillus	91061|Bacilli	G	COG2182 Maltose-binding periplasmic proteins domains	mdxE	-	-	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	M00207,M00491,M00599	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.38	-	iYO844.BSU34610	SBP_bac_8
PHALIAPI_03356	224308.BSU34620	0.0	1219.0	COG0366@1|root,COG0366@2|Bacteria,1TNZ0@1239|Firmicutes,4HB67@91061|Bacilli,1ZAZP@1386|Bacillus	91061|Bacilli	G	Alpha amylase, N-terminal ig-like domain	nplT	-	3.2.1.133,3.2.1.135,3.2.1.54	ko:K01208	ko00500,ko01100,map00500,map01100	-	R02112,R03122,R11262	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,Alpha-amylase_N,Malt_amylase_C
PHALIAPI_03357	224308.BSU34630	1.32e-222	614.0	COG1609@1|root,COG1609@2|Bacteria,1U6Z4@1239|Firmicutes,4HC2A@91061|Bacilli,1ZCWX@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yvdE	-	-	-	-	-	-	-	-	-	-	-	LacI,Peripla_BP_3
PHALIAPI_03358	224308.BSU34640	2.19e-136	385.0	COG1611@1|root,COG1611@2|Bacteria,1V9MJ@1239|Firmicutes,4HIU1@91061|Bacilli,1ZQTF@1386|Bacillus	91061|Bacilli	S	Belongs to the LOG family	yvdD	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
PHALIAPI_03359	224308.BSU34650	6.45e-70	211.0	COG1694@1|root,COG1694@2|Bacteria,1VA9N@1239|Firmicutes,4HMTD@91061|Bacilli,1ZRZC@1386|Bacillus	91061|Bacilli	S	MazG nucleotide pyrophosphohydrolase domain	yvdC	-	-	-	-	-	-	-	-	-	-	-	MazG
PHALIAPI_03360	224308.BSU34660	0.0	989.0	COG0659@1|root,COG0659@2|Bacteria,1TPI4@1239|Firmicutes,4H9V4@91061|Bacilli,1ZCKC@1386|Bacillus	91061|Bacilli	P	COG0659 Sulfate permease and related transporters (MFS superfamily)	yvdB	GO:0003333,GO:0003674,GO:0005215,GO:0005310,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008272,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015116,GO:0015138,GO:0015141,GO:0015171,GO:0015172,GO:0015179,GO:0015183,GO:0015238,GO:0015318,GO:0015556,GO:0015698,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015800,GO:0015807,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070778,GO:0071422,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358,GO:1902475,GO:1903825,GO:1905039	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	STAS,Sulfate_transp
PHALIAPI_03361	224308.BSU34670	3.73e-137	388.0	COG0288@1|root,COG0288@2|Bacteria,1V1EC@1239|Firmicutes,4HFQA@91061|Bacilli,1ZB5T@1386|Bacillus	91061|Bacilli	P	Reversible hydration of carbon dioxide	yvdA	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
PHALIAPI_03362	224308.BSU34680	2.59e-231	637.0	COG1052@1|root,COG1052@2|Bacteria,1TPCX@1239|Firmicutes,4HASY@91061|Bacilli,1ZB0I@1386|Bacillus	91061|Bacilli	CH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	yvcT	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0016618,GO:0030267,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	-	R00465,R00717,R01388,R01392,R01739	RC00031,RC00042,RC00084	ko00000,ko00001,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C
PHALIAPI_03363	224308.BSU34690	0.0	1194.0	COG0577@1|root,COG0577@2|Bacteria,1TR2D@1239|Firmicutes,4HAG9@91061|Bacilli,1ZB66@1386|Bacillus	91061|Bacilli	V	ABC transporter (permease)	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX
PHALIAPI_03364	224308.BSU34700	4.46e-181	504.0	COG1136@1|root,COG1136@2|Bacteria,1TNZG@1239|Firmicutes,4H9UT@91061|Bacilli,1ZCDW@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	yxdL_2	-	-	ko:K02003,ko:K11635	ko02020,map02020	M00258,M00315	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.134.6	-	-	ABC_tran
PHALIAPI_03365	224308.BSU34710	1.13e-250	688.0	COG5002@1|root,COG5002@2|Bacteria,1UI6U@1239|Firmicutes,4ISFW@91061|Bacilli,1ZS5S@1386|Bacillus	91061|Bacilli	T	His Kinase A (phosphoacceptor) domain	yvcQ	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
PHALIAPI_03366	224308.BSU34720	3.16e-170	475.0	COG0745@1|root,COG0745@2|Bacteria,1TR32@1239|Firmicutes,4HAQ7@91061|Bacilli,1ZE1M@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	yvcP	-	-	ko:K02483,ko:K11634	ko02020,map02020	M00470	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_03367	224308.BSU34729	1.37e-45	146.0	29SAN@1|root,30DF6@2|Bacteria,1UB89@1239|Firmicutes,4IMM0@91061|Bacilli,1ZKDV@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03368	224308.BSU34730	9.36e-182	505.0	COG2162@1|root,COG2162@2|Bacteria,1V4PB@1239|Firmicutes,4HHI4@91061|Bacilli,1ZCUM@1386|Bacillus	91061|Bacilli	Q	Belongs to the arylamine N-acetyltransferase family	yvcN	-	2.3.1.118	ko:K00675	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_2
PHALIAPI_03369	224308.BSU34740	3.92e-50	159.0	COG1925@1|root,COG1925@2|Bacteria,1VA0R@1239|Firmicutes,4HKKW@91061|Bacilli,1ZHV0@1386|Bacillus	91061|Bacilli	G	Phosphocarrier protein Chr	crh	-	-	ko:K11184	-	-	-	-	ko00000	-	-	-	PTS-HPr
PHALIAPI_03370	224308.BSU34750	3.63e-220	608.0	COG1481@1|root,COG1481@2|Bacteria,1TP2X@1239|Firmicutes,4HB4H@91061|Bacilli,1ZBKY@1386|Bacillus	91061|Bacilli	K	May be required for sporulation	whiA	GO:0008150,GO:0043937,GO:0050789,GO:0050793,GO:0065007	-	ko:K09762	-	-	-	-	ko00000	-	-	-	HTH_WhiA,LAGLIDADG_WhiA,WhiA_N
PHALIAPI_03371	224308.BSU34760	6.72e-227	625.0	COG0391@1|root,COG0391@2|Bacteria,1TPNV@1239|Firmicutes,4HA0Z@91061|Bacilli,1ZB2R@1386|Bacillus	91061|Bacilli	S	Required for morphogenesis under gluconeogenic growth conditions	yvcK	-	-	-	-	-	-	-	-	-	-	-	UPF0052
PHALIAPI_03372	224308.BSU34770	2.09e-213	589.0	COG1660@1|root,COG1660@2|Bacteria,1TPS4@1239|Firmicutes,4H9KM@91061|Bacilli,1ZCWE@1386|Bacillus	91061|Bacilli	S	Displays ATPase and GTPase activities	yvcJ	-	-	ko:K06958	-	-	-	-	ko00000,ko03019	-	-	-	ATP_bind_2
PHALIAPI_03373	224308.BSU34780	2.39e-117	335.0	COG1051@1|root,COG1051@2|Bacteria,1V66I@1239|Firmicutes,4HJEQ@91061|Bacilli,1ZQ2P@1386|Bacillus	91061|Bacilli	F	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes	yvcI	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NUDIX
PHALIAPI_03374	224308.BSU34790	1.18e-225	622.0	COG0492@1|root,COG0492@2|Bacteria,1TNZS@1239|Firmicutes,4HA4N@91061|Bacilli,1ZBDJ@1386|Bacillus	91061|Bacilli	C	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	trxB	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
PHALIAPI_03375	224308.BSU34800	7.05e-188	539.0	COG0791@1|root,COG3883@1|root,COG0791@2|Bacteria,COG3883@2|Bacteria,1UVYK@1239|Firmicutes,4HDAX@91061|Bacilli,1ZCUD@1386|Bacillus	91061|Bacilli	M	protein conserved in bacteria	spl	-	-	ko:K21471	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	NLPC_P60
PHALIAPI_03376	224308.BSU34810	0.0	954.0	COG0457@1|root,COG0457@2|Bacteria,1UBH2@1239|Firmicutes,4HB47@91061|Bacilli,1ZD40@1386|Bacillus	91061|Bacilli	S	COG0457 FOG TPR repeat	yvcD	-	-	-	-	-	-	-	-	-	-	-	HTH_psq,TPR_16,TPR_19,TPR_2,TPR_8
PHALIAPI_03377	224308.BSU34820	0.0	1086.0	COG1132@1|root,COG1132@2|Bacteria,1TSY4@1239|Firmicutes,4HAJQ@91061|Bacilli,1ZCBG@1386|Bacillus	91061|Bacilli	V	ABC transporter	lmrA	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702	3.6.3.44	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	M00700	-	-	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	3.A.1.106,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.123,3.A.1.21	-	-	ABC_membrane,ABC_tran
PHALIAPI_03379	224308.BSU34840	7.45e-258	724.0	2CA56@1|root,2Z93A@2|Bacteria,1TSPR@1239|Firmicutes,4HAN6@91061|Bacilli,1ZEQ5@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2974
PHALIAPI_03380	224308.BSU34850	4.97e-115	336.0	2E73G@1|root,331MZ@2|Bacteria,1VEY8@1239|Firmicutes,4HPNS@91061|Bacilli,1ZJRC@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03381	224308.BSU34860	6.62e-140	396.0	COG0139@1|root,COG0140@1|root,COG0139@2|Bacteria,COG0140@2|Bacteria,1UYNA@1239|Firmicutes,4HA9R@91061|Bacilli,1ZDBB@1386|Bacillus	91061|Bacilli	E	belongs to the PRA-CH family	hisI	-	3.5.4.19,3.6.1.31	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04035,R04037	RC00002,RC01055	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS14110,iYO844.BSU34860	PRA-CH,PRA-PH
PHALIAPI_03382	224308.BSU34870	5.63e-176	491.0	COG0107@1|root,COG0107@2|Bacteria,1TP0W@1239|Firmicutes,4HAAM@91061|Bacilli,1ZAUX@1386|Bacillus	91061|Bacilli	E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit	hisF	GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763	-	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04558	RC00010,RC01190,RC01943	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS14115	His_biosynth
PHALIAPI_03383	224308.BSU34880	1.32e-166	466.0	COG0106@1|root,COG0106@2|Bacteria,1V1IR@1239|Firmicutes,4HACP@91061|Bacilli,1ZC7D@1386|Bacillus	91061|Bacilli	E	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase	hisA	GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.3.1.16	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04640	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
PHALIAPI_03384	224308.BSU34890	6.37e-144	406.0	COG0118@1|root,COG0118@2|Bacteria,1TQT0@1239|Firmicutes,4HFXQ@91061|Bacilli,1ZBC4@1386|Bacillus	91061|Bacilli	E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR	hisH	GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	-	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04558	RC00010,RC01190,RC01943	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase
PHALIAPI_03385	224308.BSU34900	2.87e-138	390.0	COG0131@1|root,COG0131@2|Bacteria,1TRH7@1239|Firmicutes,4HCFG@91061|Bacilli,1ZBVJ@1386|Bacillus	91061|Bacilli	E	imidazoleglycerol-phosphate dehydratase	hisB	GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.2.1.19	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R03457	RC00932	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS14130	IGPD
PHALIAPI_03386	224308.BSU34910	8.61e-291	796.0	COG0141@1|root,COG0141@2|Bacteria,1TPAW@1239|Firmicutes,4H9XK@91061|Bacilli,1ZCAX@1386|Bacillus	91061|Bacilli	E	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine	hisD	GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.23	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01158,R01163,R03012	RC00099,RC00242,RC00463	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU34910	Histidinol_dh
PHALIAPI_03387	224308.BSU34920	1.06e-147	416.0	COG0040@1|root,COG0040@2|Bacteria,1TSVZ@1239|Firmicutes,4H9MH@91061|Bacilli,1ZCFW@1386|Bacillus	91061|Bacilli	E	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity	hisG	GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.17	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01071	RC02819,RC03200	ko00000,ko00001,ko00002,ko01000	-	-	-	HisG,tRNA-synt_His
PHALIAPI_03388	224308.BSU34930	4.18e-282	771.0	COG3705@1|root,COG3705@2|Bacteria,1TPZZ@1239|Firmicutes,4HBBA@91061|Bacilli,1ZB4H@1386|Bacillus	91061|Bacilli	E	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine	hisZ	-	-	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01071	RC02819,RC03200	ko00000,ko00001,ko00002	-	-	-	tRNA-synt_His
PHALIAPI_03389	224308.BSU34940	6.12e-179	498.0	COG4990@1|root,COG4990@2|Bacteria,1V3XE@1239|Firmicutes,4HK8M@91061|Bacilli,1ZDKM@1386|Bacillus	91061|Bacilli	NU	protein conserved in bacteria	yvpB	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C39_2
PHALIAPI_03390	224308.BSU34950	8.06e-156	437.0	COG5297@1|root,COG5297@2|Bacteria,1VSCG@1239|Firmicutes,4HVEI@91061|Bacilli	91061|Bacilli	G	Pectate lyase	-	-	4.2.2.10,4.2.2.2	ko:K19551	ko00040,map00040	-	R02361	RC00049,RC00705	ko00000,ko00001,ko01000	-	-	-	Pectate_lyase
PHALIAPI_03391	224308.BSU34960	1.07e-120	344.0	COG0110@1|root,COG0110@2|Bacteria,1V1SM@1239|Firmicutes,4HFTP@91061|Bacilli,1ZBJ5@1386|Bacillus	91061|Bacilli	S	COG0110 Acetyltransferase (isoleucine patch superfamily)	yvoF	-	2.3.1.79	ko:K00661	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep,Hexapep_2
PHALIAPI_03392	224308.BSU34970	3.56e-152	427.0	COG0546@1|root,COG0546@2|Bacteria,1TPPZ@1239|Firmicutes,4HE7X@91061|Bacilli,1ZB95@1386|Bacillus	91061|Bacilli	S	Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool	ppaX	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360	3.6.1.1	ko:K06019	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	HAD_2
PHALIAPI_03393	224308.BSU34980	5.65e-206	572.0	COG0370@1|root,COG0370@2|Bacteria,1TQT3@1239|Firmicutes,4HAIZ@91061|Bacilli,1ZAYP@1386|Bacillus	91061|Bacilli	P	COG0370 Fe2 transport system protein B	yvoD	-	-	-	-	-	-	-	-	-	-	-	Gate
PHALIAPI_03394	224308.BSU34990	1.29e-194	539.0	COG0682@1|root,COG0682@2|Bacteria,1TPAK@1239|Firmicutes,4HAT0@91061|Bacilli,1ZAR8@1386|Bacillus	91061|Bacilli	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:0140096,GO:1901564	-	ko:K13292	-	-	-	-	ko00000,ko01000	-	-	-	LGT
PHALIAPI_03395	224308.BSU35000	3.62e-217	600.0	COG1493@1|root,COG1493@2|Bacteria,1TP5Z@1239|Firmicutes,4HAXR@91061|Bacilli,1ZD05@1386|Bacillus	91061|Bacilli	F	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion	hprK	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K06023	-	-	-	-	ko00000,ko01000	-	-	-	Hpr_kinase_C,Hpr_kinase_N
PHALIAPI_03396	224308.BSU35010	8.41e-280	765.0	COG1820@1|root,COG1820@2|Bacteria,1TPFK@1239|Firmicutes,4HC6C@91061|Bacilli,1ZCM7@1386|Bacillus	91061|Bacilli	G	Belongs to the metallo-dependent hydrolases superfamily. NagA family	nagA	GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0006040,GO:0006044,GO:0006046,GO:0008150,GO:0008152,GO:0008448,GO:0009056,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046348,GO:0046872,GO:0046914,GO:0046983,GO:0071704,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901575	3.5.1.25	ko:K01443	ko00520,ko01130,map00520,map01130	-	R02059	RC00166,RC00300	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1
PHALIAPI_03397	224308.BSU35020	3.66e-167	468.0	COG0363@1|root,COG0363@2|Bacteria,1TP10@1239|Firmicutes,4HAG4@91061|Bacilli,1ZD28@1386|Bacillus	91061|Bacilli	G	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion	nagB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	3.5.99.6	ko:K02564	ko00520,ko01100,map00520,map01100	-	R00765	RC00163	ko00000,ko00001,ko01000	-	-	iYO844.BSU02360,iYO844.BSU35020	Glucosamine_iso
PHALIAPI_03398	224308.BSU35030	3.53e-170	475.0	COG2188@1|root,COG2188@2|Bacteria,1UYBW@1239|Firmicutes,4HDDG@91061|Bacilli,1ZBS6@1386|Bacillus	91061|Bacilli	K	transcriptional	yvoA	-	-	ko:K03710	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
PHALIAPI_03399	224308.BSU35040	0.0	2591.0	COG1409@1|root,COG1409@2|Bacteria,1TPQQ@1239|Firmicutes,4HC2W@91061|Bacilli,1ZCF0@1386|Bacillus	91061|Bacilli	Q	Calcineurin-like phosphoesterase	yvnB	-	-	-	-	-	-	-	-	-	-	-	Gram_pos_anchor,LTD,Metallophos,fn3
PHALIAPI_03400	224308.BSU35100	2.45e-65	202.0	COG1950@1|root,COG1950@2|Bacteria,1VF4I@1239|Firmicutes,4HNXP@91061|Bacilli,1ZI79@1386|Bacillus	91061|Bacilli	S	Membrane	yvlD	-	-	ko:K08972	-	-	-	-	ko00000	-	-	-	Phage_holin_4_2
PHALIAPI_03401	224308.BSU35110	6.11e-36	122.0	COG1983@1|root,COG1983@2|Bacteria,1VKBQ@1239|Firmicutes,4HRGW@91061|Bacilli,1ZJCV@1386|Bacillus	91061|Bacilli	KT	PspC domain	yvlC	-	-	ko:K03973	-	-	-	-	ko00000,ko02048,ko03000	-	-	-	DUF4097,PspC
PHALIAPI_03402	224308.BSU35120	9.59e-220	611.0	COG3595@1|root,COG3595@2|Bacteria,1TS90@1239|Firmicutes,4HDI6@91061|Bacilli,1ZC95@1386|Bacillus	91061|Bacilli	S	Putative adhesin	yvlB	-	-	-	-	-	-	-	-	-	-	-	DUF4097
PHALIAPI_03403	224308.BSU35130	8.09e-65	198.0	2DZIG@1|root,30CTN@2|Bacteria,1UACD@1239|Firmicutes,4IKQM@91061|Bacilli,1ZHD2@1386|Bacillus	91061|Bacilli	-	-	yvlA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03404	224308.BSU35140	2.25e-45	146.0	29RWT@1|root,30D0Y@2|Bacteria,1UANW@1239|Firmicutes,4IM1I@91061|Bacilli,1ZIQG@1386|Bacillus	91061|Bacilli	-	-	yvkN	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03405	1178537.BA1_11259	6.4e-149	424.0	COG1344@1|root,COG1344@2|Bacteria,1TP1K@1239|Firmicutes,4H9UA@91061|Bacilli,1ZAQJ@1386|Bacillus	91061|Bacilli	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	hag	GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464	-	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_N
PHALIAPI_03406	224308.BSU35160	0.0	1886.0	COG0178@1|root,COG0178@2|Bacteria,1TPIJ@1239|Firmicutes,4HAW9@91061|Bacilli,1ZARC@1386|Bacillus	91061|Bacilli	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
PHALIAPI_03407	224308.BSU35170	0.0	1271.0	COG0556@1|root,COG0556@2|Bacteria,1TPKB@1239|Firmicutes,4HB81@91061|Bacilli,1ZC50@1386|Bacillus	91061|Bacilli	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
PHALIAPI_03408	224308.BSU35180	2.54e-42	139.0	COG4897@1|root,COG4897@2|Bacteria,1VMTY@1239|Firmicutes,4HQMX@91061|Bacilli,1ZITV@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	csbA	-	-	-	-	-	-	-	-	-	-	-	DUF2198
PHALIAPI_03409	224308.BSU35190	0.0	1630.0	COG0574@1|root,COG3848@1|root,COG0574@2|Bacteria,COG3848@2|Bacteria,1UYA0@1239|Firmicutes,4HDHF@91061|Bacilli,1ZQ5X@1386|Bacillus	91061|Bacilli	GT	Phosphotransferase	yvkC	-	2.7.9.2	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	M00173,M00374	R00199	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PPDK_N
PHALIAPI_03410	224308.BSU35200	1.43e-131	373.0	COG1309@1|root,COG1309@2|Bacteria,1V69B@1239|Firmicutes,4HIE0@91061|Bacilli,1ZEDX@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yvkB	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_03411	224308.BSU35210	7.12e-294	805.0	COG0477@1|root,COG2814@2|Bacteria,1U4EP@1239|Firmicutes,4HAZC@91061|Bacilli,1ZC4J@1386|Bacillus	91061|Bacilli	P	-transporter	yvkA	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
PHALIAPI_03412	224308.BSU35220	1.29e-279	765.0	COG0265@1|root,COG0265@2|Bacteria,1TSBA@1239|Firmicutes,4HA05@91061|Bacilli,1ZAQG@1386|Bacillus	91061|Bacilli	O	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain	minJ	-	-	-	-	-	-	-	-	-	-	-	PDZ_2
PHALIAPI_03413	1051501.AYTL01000004_gene3438	1.38e-73	221.0	29RHV@1|root,30CKU@2|Bacteria,1UA28@1239|Firmicutes,4IKBF@91061|Bacilli,1ZGBI@1386|Bacillus	91061|Bacilli	S	Swarming motility protein	swrA	-	-	-	-	-	-	-	-	-	-	-	SwrA
PHALIAPI_03414	224308.BSU35240	0.0	929.0	COG0793@1|root,COG3409@1|root,COG0793@2|Bacteria,COG3409@2|Bacteria,1TPBI@1239|Firmicutes,4HAKE@91061|Bacilli,1ZBDE@1386|Bacillus	91061|Bacilli	M	Belongs to the peptidase S41A family	ctpB	GO:0003674,GO:0003824,GO:0004175,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009653,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030154,GO:0030288,GO:0030313,GO:0030435,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043603,GO:0043900,GO:0043902,GO:0043934,GO:0044237,GO:0044238,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1900190,GO:1900192,GO:1901564	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ,PDZ_2,PG_binding_1,Peptidase_S41
PHALIAPI_03415	224308.BSU35250	5.45e-199	553.0	COG2177@1|root,COG2177@2|Bacteria,1TPND@1239|Firmicutes,4HA5A@91061|Bacilli,1ZC4Q@1386|Bacillus	91061|Bacilli	D	Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation	ftsX	GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0032506,GO:0034097,GO:0042173,GO:0042221,GO:0043937,GO:0043938,GO:0044085,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0090529,GO:1902531	-	ko:K09811	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	FtsX
PHALIAPI_03416	224308.BSU35260	1.5e-159	447.0	COG2884@1|root,COG2884@2|Bacteria,1TP58@1239|Firmicutes,4H9Z2@91061|Bacilli,1ZCAE@1386|Bacillus	91061|Bacilli	D	cell division ATP-binding protein FtsE	ftsE	GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0008356,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0032506,GO:0042173,GO:0043937,GO:0043938,GO:0044085,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:1902531	-	ko:K09812	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	ABC_tran
PHALIAPI_03417	224308.BSU35270	1.87e-74	223.0	COG2010@1|root,COG2010@2|Bacteria,1VEEP@1239|Firmicutes,4HP6N@91061|Bacilli,1ZITU@1386|Bacillus	91061|Bacilli	C	COG2010 Cytochrome c, mono- and diheme variants	cccB	-	-	ko:K12263,ko:K13300	-	-	-	-	ko00000	-	-	-	Cytochrome_CBB3
PHALIAPI_03418	224308.BSU35280	1.86e-184	514.0	COG1284@1|root,COG1284@2|Bacteria,1TR9J@1239|Firmicutes,4H9N6@91061|Bacilli,1ZC5M@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein conserved in bacteria (DUF2179)	yvjA	-	-	-	-	-	-	-	-	-	-	-	DUF2179,YitT_membrane
PHALIAPI_03419	224308.BSU35290	2e-232	641.0	COG1186@1|root,COG1186@2|Bacteria,1TPSB@1239|Firmicutes,4H9N2@91061|Bacilli,1ZB5N@1386|Bacillus	91061|Bacilli	J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA	prfB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K02836	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
PHALIAPI_03420	224308.BSU35300	0.0	1640.0	COG0653@1|root,COG0653@2|Bacteria,1TPEY@1239|Firmicutes,4HA22@91061|Bacilli,1ZAXF@1386|Bacillus	91061|Bacilli	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
PHALIAPI_03421	224308.BSU35310	1.73e-132	375.0	COG1544@1|root,COG1544@2|Bacteria,1V1D5@1239|Firmicutes,4HFX9@91061|Bacilli,1ZFW8@1386|Bacillus	91061|Bacilli	J	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase	hpf	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
PHALIAPI_03422	224308.BSU35319	9.14e-88	257.0	2AQ94@1|root,31FEZ@2|Bacteria,1UA12@1239|Firmicutes,4IK9M@91061|Bacilli,1ZG21@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03423	1294265.JCM21738_722	8.69e-09	56.6	2E69G@1|root,330XF@2|Bacteria,1VEKH@1239|Firmicutes,4HNWI@91061|Bacilli,1ZIW8@1386|Bacillus	91061|Bacilli	S	bacterial-type flagellum organization	fliT	-	-	ko:K02423	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	-
PHALIAPI_03424	224308.BSU35330	1.48e-90	265.0	COG1516@1|root,COG1516@2|Bacteria,1VA8K@1239|Firmicutes,4HIN5@91061|Bacilli,1ZH26@1386|Bacillus	91061|Bacilli	N	flagellar protein FliS	fliS	-	-	ko:K02422	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliS
PHALIAPI_03425	1051501.AYTL01000004_gene3427	1.67e-316	867.0	COG1345@1|root,COG1345@2|Bacteria,1TQ66@1239|Firmicutes,4H9TN@91061|Bacilli,1ZCIG@1386|Bacillus	91061|Bacilli	N	morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end	fliD	GO:0001539,GO:0005575,GO:0005576,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009420,GO:0009421,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588	-	ko:K02407	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_IN,FliD_C,FliD_N
PHALIAPI_03426	224308.BSU35350	1.1e-76	228.0	COG1334@1|root,COG1334@2|Bacteria,1VFRY@1239|Firmicutes,4HNSH@91061|Bacilli,1ZIZC@1386|Bacillus	91061|Bacilli	N	flagellar protein FlaG	flaG	-	-	ko:K06603	-	-	-	-	ko00000,ko02035	-	-	-	FlaG
PHALIAPI_03427	1178537.BA1_11259	1.43e-124	362.0	COG1344@1|root,COG1344@2|Bacteria,1TP1K@1239|Firmicutes,4H9UA@91061|Bacilli,1ZAQJ@1386|Bacillus	91061|Bacilli	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	hag	GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464	-	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_N
PHALIAPI_03428	224308.BSU35370	2.58e-41	136.0	COG1551@1|root,COG1551@2|Bacteria,1VEEF@1239|Firmicutes,4HNPJ@91061|Bacilli,1ZJ2S@1386|Bacillus	91061|Bacilli	T	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding	csrA	-	-	ko:K03563	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03019	-	-	-	CsrA
PHALIAPI_03429	224308.BSU35380	1.23e-96	281.0	COG1699@1|root,COG1699@2|Bacteria,1VA6Y@1239|Firmicutes,4HKYD@91061|Bacilli,1ZI2D@1386|Bacillus	91061|Bacilli	S	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum	fliW	-	-	ko:K13626	-	-	-	-	ko00000,ko02035	-	-	-	FliW
PHALIAPI_03430	224308.BSU35390	1.7e-92	275.0	2AZFG@1|root,31RPF@2|Bacteria,1VDGT@1239|Firmicutes,4HMCF@91061|Bacilli,1ZG8D@1386|Bacillus	91061|Bacilli	-	-	yviE	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03431	224308.BSU35400	1.55e-196	546.0	COG1344@1|root,COG1344@2|Bacteria,1TPDT@1239|Firmicutes,4HCCZ@91061|Bacilli,1ZC4T@1386|Bacillus	91061|Bacilli	N	Belongs to the bacterial flagellin family	flgL	GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464	-	ko:K02397	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_N
PHALIAPI_03432	224308.BSU35410	0.0	952.0	COG1256@1|root,COG4786@1|root,COG1256@2|Bacteria,COG4786@2|Bacteria,1TPXH@1239|Firmicutes,4HAKM@91061|Bacilli,1ZB70@1386|Bacillus	91061|Bacilli	N	flagellar hook-associated protein	flgK	-	-	ko:K02396	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
PHALIAPI_03433	224308.BSU35420	7.06e-102	296.0	COG3418@1|root,COG3418@2|Bacteria,1VF67@1239|Firmicutes,4HMI4@91061|Bacilli,1ZJCA@1386|Bacillus	91061|Bacilli	NOU	FlgN protein	yvyG	-	-	-	-	-	-	-	-	-	-	-	FlgN
PHALIAPI_03434	224308.BSU35430	5.05e-52	164.0	COG2747@1|root,COG2747@2|Bacteria,1VKHM@1239|Firmicutes,4HRCG@91061|Bacilli,1ZIVP@1386|Bacillus	91061|Bacilli	KNU	Negative regulator of flagellin synthesis	flgM	-	-	ko:K02398	ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgM
PHALIAPI_03435	224308.BSU35440	1.83e-96	280.0	2D61I@1|root,32TKA@2|Bacteria,1VB5H@1239|Firmicutes,4HKIR@91061|Bacilli,1ZIAM@1386|Bacillus	91061|Bacilli	S	flagellar protein	yvyF	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03436	224308.BSU35450	8.82e-160	448.0	COG1040@1|root,COG1040@2|Bacteria,1V73S@1239|Firmicutes,4HJ6R@91061|Bacilli,1ZG88@1386|Bacillus	91061|Bacilli	S	Phosphoribosyl transferase domain	comFC	-	-	ko:K02242	-	M00429	-	-	ko00000,ko00002,ko02044	-	-	-	Pribosyltran
PHALIAPI_03437	224308.BSU35460	1.04e-60	187.0	2DNY2@1|root,32ZR4@2|Bacteria,1VEGZ@1239|Firmicutes,4HQDM@91061|Bacilli,1ZHFM@1386|Bacillus	91061|Bacilli	S	Late competence development protein ComFB	comFB	-	-	ko:K02241	-	M00429	-	-	ko00000,ko00002,ko02044	-	-	-	ComFB
PHALIAPI_03438	224308.BSU35470	0.0	923.0	COG4098@1|root,COG4098@2|Bacteria,1TPZE@1239|Firmicutes,4HB00@91061|Bacilli,1ZBXC@1386|Bacillus	91061|Bacilli	L	COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)	comFA	GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576	-	ko:K02240	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1	-	-	DEAD,Helicase_C,ResIII
PHALIAPI_03439	224308.BSU35480	1.77e-198	550.0	COG1307@1|root,COG1307@2|Bacteria,1TRM7@1239|Firmicutes,4HBIR@91061|Bacilli,1ZAQH@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	degV	-	-	-	-	-	-	-	-	-	-	-	DegV
PHALIAPI_03440	224308.BSU35490	7.16e-163	456.0	COG2197@1|root,COG2197@2|Bacteria,1TRXG@1239|Firmicutes,4HA3V@91061|Bacilli,1ZB23@1386|Bacillus	91061|Bacilli	KT	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	degU	-	-	ko:K02479,ko:K07692	ko02020,ko02024,map02020,map02024	M00478	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	GerE,Response_reg
PHALIAPI_03441	224308.BSU35500	2.94e-247	682.0	COG4585@1|root,COG4585@2|Bacteria,1TQI3@1239|Firmicutes,4HAUU@91061|Bacilli,1ZDAA@1386|Bacillus	91061|Bacilli	T	Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase	degS	-	2.7.13.3	ko:K07777	ko02020,map02020	M00478	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DegS,HATPase_c,HisKA_3
PHALIAPI_03442	224308.BSU35510	2.41e-155	436.0	COG1739@1|root,COG1739@2|Bacteria,1V6MQ@1239|Firmicutes,4HBIT@91061|Bacilli,1ZAXD@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF1949)	yvyE	-	3.4.13.9	ko:K01271	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DUF1949,UPF0029
PHALIAPI_03443	224308.BSU35520	8.05e-225	626.0	COG1316@1|root,COG1316@2|Bacteria,1TQ9C@1239|Firmicutes,4HB29@91061|Bacilli,1ZB6K@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yvhJ	-	-	-	-	-	-	-	-	-	-	-	LytR_cpsA_psr
PHALIAPI_03444	224308.BSU35530	2.1e-231	640.0	COG0472@1|root,COG0472@2|Bacteria,1TP9V@1239|Firmicutes,4H9KT@91061|Bacilli,1ZBZB@1386|Bacillus	91061|Bacilli	M	COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase	tagO	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914	2.7.8.33,2.7.8.35	ko:K02851	-	-	R08856	RC00002	ko00000,ko01000,ko01003,ko01005	-	-	-	Glycos_transf_4
PHALIAPI_03445	224308.BSU35540	3.96e-295	804.0	COG0438@1|root,COG0438@2|Bacteria,1TQ1S@1239|Firmicutes,4HP9Q@91061|Bacilli,1ZBVC@1386|Bacillus	91061|Bacilli	M	Teichuronic acid biosynthesis glycosyltransferase tuaH	tuaH	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	ko:K16699	-	-	-	-	ko00000,ko01000,ko01003	-	-	-	Glyco_trans_1_4
PHALIAPI_03446	224308.BSU35550	8.42e-187	518.0	COG1215@1|root,COG1215@2|Bacteria,1VUUB@1239|Firmicutes,4IS9M@91061|Bacilli,1ZCPM@1386|Bacillus	91061|Bacilli	M	Glycosyltransferase like family 2	tuaG	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	ko:K16698	-	-	-	-	ko00000,ko01000,ko01003	-	GT2	iYO844.BSU35550	Glycos_transf_2
PHALIAPI_03447	224308.BSU35560	8.23e-147	415.0	COG3206@1|root,COG3206@2|Bacteria,1VMAJ@1239|Firmicutes,4HRWH@91061|Bacilli,1ZET2@1386|Bacillus	91061|Bacilli	M	protein involved in exopolysaccharide biosynthesis	tuaF	-	-	ko:K16706	-	-	-	-	ko00000	-	-	-	Wzz
PHALIAPI_03448	224308.BSU35570	0.0	906.0	COG3307@1|root,COG3307@2|Bacteria,1V5WV@1239|Firmicutes,4HF4U@91061|Bacilli,1ZC1E@1386|Bacillus	91061|Bacilli	M	Teichuronic acid biosynthesis protein	tuaE	-	-	ko:K16705	-	-	-	-	ko00000	-	-	-	Wzy_C
PHALIAPI_03449	224308.BSU35580	0.0	893.0	COG1004@1|root,COG1004@2|Bacteria,1TQFN@1239|Firmicutes,4HADP@91061|Bacilli,1ZAP3@1386|Bacillus	91061|Bacilli	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	tuaD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
PHALIAPI_03450	224308.BSU35590	1.15e-278	762.0	COG0297@1|root,COG0438@1|root,COG0297@2|Bacteria,COG0438@2|Bacteria,1TPS8@1239|Firmicutes,4ISX6@91061|Bacilli,1ZS7S@1386|Bacillus	91061|Bacilli	GM	Teichuronic acid	tuaC	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	ko:K16697	-	-	-	-	ko00000,ko01000,ko01003	-	GT4	iYO844.BSU35590	Glyco_transf_4,Glycos_transf_1
PHALIAPI_03451	224308.BSU35600	3.44e-316	865.0	COG2244@1|root,COG2244@2|Bacteria,1TPSH@1239|Firmicutes,4HAGX@91061|Bacilli,1ZDDM@1386|Bacillus	91061|Bacilli	S	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid	tuaB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03328,ko:K16694,ko:K16695	-	-	-	-	ko00000,ko02000	2.A.66.2,2.A.66.2.6,2.A.66.2.7	-	iYO844.BSU35600	Polysacc_synt_3,Polysacc_synt_C
PHALIAPI_03452	1051501.AYTL01000004_gene3401	1.49e-143	406.0	COG2148@1|root,COG2148@2|Bacteria,1TP7M@1239|Firmicutes,4HB15@91061|Bacilli,1ZDDY@1386|Bacillus	91061|Bacilli	M	COG2148 Sugar transferases involved in lipopolysaccharide synthesis	tuaA	-	-	-	-	-	-	-	-	-	-	-	Bac_transf
PHALIAPI_03453	1159488.SEQMU2_10260	9e-109	346.0	COG1215@1|root,COG1215@2|Bacteria,1V0TF@1239|Firmicutes,4IS4U@91061|Bacilli,4GXTV@90964|Staphylococcaceae	91061|Bacilli	M	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
PHALIAPI_03454	279010.BL03348	1.84e-264	735.0	COG0860@1|root,COG2247@1|root,COG0860@2|Bacteria,COG2247@2|Bacteria,1UYPW@1239|Firmicutes,4HBVT@91061|Bacilli,1ZD0F@1386|Bacillus	91061|Bacilli	M	n-acetylmuramoyl-L-alanine amidase	lytC	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3,CW_binding_2,Cu_amine_oxidN1,GBS_Bsp-like,PG_binding_1,SH3_3,SLH
PHALIAPI_03455	279010.BL03347	0.0	1113.0	COG2247@1|root,COG2385@1|root,COG2247@2|Bacteria,COG2385@2|Bacteria,1V9XE@1239|Firmicutes,4HDNT@91061|Bacilli,1ZF67@1386|Bacillus	91061|Bacilli	D	Stage II sporulation protein	lytB	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	-	-	-	-	-	-	-	-	-	CW_binding_2,PG_binding_1,SH3_3,SpoIID
PHALIAPI_03456	1178540.BA70_11210	9.07e-16	76.3	2E29G@1|root,32XF4@2|Bacteria,1UAW3@1239|Firmicutes,4IM8W@91061|Bacilli,1ZJHI@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03457	224308.BSU35650	1.16e-211	585.0	COG1316@1|root,COG1316@2|Bacteria,1TR1B@1239|Firmicutes,4HA09@91061|Bacilli,1ZBT5@1386|Bacillus	91061|Bacilli	K	May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)	lytR	-	-	-	-	-	-	-	-	-	-	-	LytR_cpsA_psr
PHALIAPI_03458	224308.BSU35660	8.63e-274	749.0	COG0381@1|root,COG0381@2|Bacteria,1TQZT@1239|Firmicutes,4HBI3@91061|Bacilli,1ZCZG@1386|Bacillus	91061|Bacilli	M	Belongs to the UDP-N-acetylglucosamine 2-epimerase family	mnaA	-	5.1.3.14	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	M00362	R00420	RC00290	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	iSB619.SA_RS11005	Epimerase_2
PHALIAPI_03459	1159488.SEQMU2_10260	4.13e-103	332.0	COG1215@1|root,COG1215@2|Bacteria,1V0TF@1239|Firmicutes,4IS4U@91061|Bacilli,4GXTV@90964|Staphylococcaceae	91061|Bacilli	M	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
PHALIAPI_03460	1227360.C176_03428	6.85e-118	363.0	COG0438@1|root,COG0438@2|Bacteria,1V09I@1239|Firmicutes,4HG82@91061|Bacilli,26H4R@186818|Planococcaceae	91061|Bacilli	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_A_1,Glycos_transf_1
PHALIAPI_03462	224308.BSU35670	2.74e-208	576.0	COG1210@1|root,COG1210@2|Bacteria,1TQ24@1239|Firmicutes,4HATY@91061|Bacilli,1ZASX@1386|Bacillus	91061|Bacilli	M	UTP-glucose-1-phosphate uridylyltransferase	gtaB	-	2.7.7.9	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	M00129,M00361,M00362,M00549	R00289	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
PHALIAPI_03463	224308.BSU35700	0.0	996.0	COG1134@1|root,COG1134@2|Bacteria,1TQKK@1239|Firmicutes,4HC6N@91061|Bacilli,1ZC6D@1386|Bacillus	91061|Bacilli	GM	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system	tagH	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0015921,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:1901264,GO:1901505	3.6.3.40	ko:K09693	ko02010,map02010	M00251	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.104	-	-	ABC_tran,LysM
PHALIAPI_03464	224308.BSU35710	1.67e-168	474.0	COG1682@1|root,COG1682@2|Bacteria,1TQZF@1239|Firmicutes,4HB9R@91061|Bacilli,1ZC4D@1386|Bacillus	91061|Bacilli	GM	Transport permease protein	tagG	GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0033036,GO:0051179,GO:0051234,GO:0071702,GO:1901264	-	ko:K09692	ko02010,map02010	M00251	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.104	-	-	ABC2_membrane
PHALIAPI_03465	545693.BMQ_1136	7.7e-182	541.0	COG1887@1|root,COG1887@2|Bacteria,1VTRP@1239|Firmicutes,4HUVX@91061|Bacilli,1ZBWP@1386|Bacillus	91061|Bacilli	M	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyphos_transf
PHALIAPI_03466	574375.BAGA_12625	6.73e-165	474.0	COG1215@1|root,COG1215@2|Bacteria,1VRNG@1239|Firmicutes,4HV0M@91061|Bacilli,1ZPWG@1386|Bacillus	91061|Bacilli	M	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
PHALIAPI_03467	315750.BPUM_2919	1.59e-101	332.0	2A2YD@1|root,30RCT@2|Bacteria,1V584@1239|Firmicutes,4HHHC@91061|Bacilli,1ZQSU@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03468	224308.BSU35690	5.87e-134	400.0	COG0463@1|root,COG0463@2|Bacteria,1V35I@1239|Firmicutes,4HG1U@91061|Bacilli,1ZAYQ@1386|Bacillus	91061|Bacilli	M	Glycosyltransferase like family 2	-	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
PHALIAPI_03469	279010.BL02463	1.79e-166	490.0	COG1887@1|root,COG1887@2|Bacteria,1TP75@1239|Firmicutes,4H9Q1@91061|Bacilli,1ZB61@1386|Bacillus	91061|Bacilli	M	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC	tagF	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016740,GO:0016757,GO:0044464,GO:0071944	2.7.8.12	ko:K09809	-	-	-	-	ko00000,ko01000	-	-	-	Glyphos_transf
PHALIAPI_03470	279010.BL02464	3.25e-74	223.0	COG0615@1|root,COG0615@2|Bacteria,1V3KY@1239|Firmicutes,4HGWZ@91061|Bacilli,1ZGEJ@1386|Bacillus	91061|Bacilli	IM	Cytidylyltransferase	tagD	-	2.7.7.39	ko:K00980	ko00564,map00564	-	R00856	RC00002	ko00000,ko00001,ko01000	-	-	-	CTP_transf_like
PHALIAPI_03471	279010.BL02432	9.68e-111	326.0	COG1922@1|root,COG1922@2|Bacteria,1V3QV@1239|Firmicutes,4HH6B@91061|Bacilli,1ZFMX@1386|Bacillus	91061|Bacilli	M	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid	tagA	-	2.4.1.187	ko:K05946	ko05111,map05111	-	-	-	ko00000,ko00001,ko01000,ko01003	-	GT26	-	Glyco_tran_WecB
PHALIAPI_03472	326423.RBAM_032890	3.84e-117	350.0	COG1887@1|root,COG1887@2|Bacteria,1TSTN@1239|Firmicutes,4HBID@91061|Bacilli,1ZCUZ@1386|Bacillus	91061|Bacilli	M	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC	tagB	-	2.7.8.44	ko:K21285	-	-	R11558	RC00078	ko00000,ko01000	-	-	iYO844.BSU35760	Glyphos_transf
PHALIAPI_03473	1347086.CCBA010000004_gene4233	2.07e-134	384.0	COG1211@1|root,COG1211@2|Bacteria,1V3M7@1239|Firmicutes,4HFH7@91061|Bacilli,1ZE75@1386|Bacillus	91061|Bacilli	I	Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate	tarI	GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567	2.7.7.40,2.7.7.60	ko:K00991,ko:K21030	ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130	M00096	R02921,R05633	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	IspD
PHALIAPI_03474	1347086.CCBA010000004_gene4232	5.68e-186	523.0	COG1063@1|root,COG1063@2|Bacteria,1TQSR@1239|Firmicutes,4HCCH@91061|Bacilli,1ZDNN@1386|Bacillus	91061|Bacilli	E	Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate	tarJ	-	1.1.1.137,1.1.1.405	ko:K05352,ko:K21680	ko00040,ko01100,map00040,map01100	-	R01524,R01525	RC00089	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N,Glu_dehyd_C
PHALIAPI_03475	171693.BN988_03551	6.69e-110	334.0	COG1887@1|root,COG1887@2|Bacteria,1TSTN@1239|Firmicutes,4HBRD@91061|Bacilli	91061|Bacilli	M	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	tarK	-	2.7.8.14,2.7.8.46,2.7.8.47	ko:K18704,ko:K21592	-	-	R11613,R11614,R11621	-	ko00000,ko01000	-	-	-	Glycos_transf_2,Glyphos_transf
PHALIAPI_03476	1408303.JNJJ01000004_gene823	1.42e-235	672.0	COG1887@1|root,COG1887@2|Bacteria,1TSTN@1239|Firmicutes,4HCMW@91061|Bacilli,1ZPWY@1386|Bacillus	91061|Bacilli	M	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	tarL	-	2.7.8.14,2.7.8.47	ko:K18704	-	-	R11614,R11621	-	ko00000,ko01000	-	-	-	Glyphos_transf
PHALIAPI_03477	224308.BSU35780	0.0	932.0	COG4193@1|root,COG4193@2|Bacteria,1V1F9@1239|Firmicutes,4HWI1@91061|Bacilli,1ZRF0@1386|Bacillus	91061|Bacilli	G	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	lytD	-	3.2.1.96	ko:K01227	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000	-	-	-	Glucosaminidase,PA14,SH3_3,SPOR
PHALIAPI_03478	224308.BSU35790	4.53e-239	655.0	COG1482@1|root,COG1482@2|Bacteria,1VRGI@1239|Firmicutes,4HBFW@91061|Bacilli,1ZDJI@1386|Bacillus	91061|Bacilli	G	mannose-6-phosphate isomerase	manA	-	5.3.1.8	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01819	RC00376	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU12020	PMI_typeI
PHALIAPI_03479	224308.BSU35800	0.0	909.0	COG0697@1|root,COG0697@2|Bacteria,1TP7K@1239|Firmicutes,4HAH1@91061|Bacilli,1ZBEF@1386|Bacillus	91061|Bacilli	EG	Spore germination protein	gerBA	-	-	ko:K06288,ko:K06291,ko:K06310	-	-	-	-	ko00000	-	-	-	GerA
PHALIAPI_03480	224308.BSU35810	4.24e-248	683.0	COG0814@1|root,COG0814@2|Bacteria,1UI6P@1239|Firmicutes,4ISFP@91061|Bacilli,1ZDSE@1386|Bacillus	91061|Bacilli	E	Spore germination protein	gerAB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K06289,ko:K06292	-	-	-	-	ko00000,ko02000	2.A.3.9.1,2.A.3.9.2	-	-	Spore_permease
PHALIAPI_03481	224308.BSU35820	2.52e-263	722.0	28IEM@1|root,2Z8GN@2|Bacteria,1UB3Y@1239|Firmicutes,4HV0B@91061|Bacilli,1ZRWJ@1386|Bacillus	91061|Bacilli	S	Spore germination protein	gerBC	-	-	ko:K06290,ko:K06293,ko:K06312	-	-	-	-	ko00000	-	-	-	Spore_GerAC
PHALIAPI_03482	224308.BSU35830	9.1e-315	859.0	COG0477@1|root,COG2814@2|Bacteria,1TREV@1239|Firmicutes,4HAN1@91061|Bacilli,1ZAUM@1386|Bacillus	91061|Bacilli	U	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	ywtG	GO:0003674,GO:0005215,GO:0005351,GO:0005402,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034219,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600	-	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	-	-	-	ko00000,ko00001,ko02000	2.A.1.1,2.A.1.1.2,2.A.1.1.26	-	-	Sugar_tr
PHALIAPI_03483	326423.RBAM_032970	3.19e-181	510.0	COG1316@1|root,COG1316@2|Bacteria,1TQ9C@1239|Firmicutes,4HB29@91061|Bacilli,1ZB6K@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ywtF_2	-	-	-	-	-	-	-	-	-	-	-	LytR_cpsA_psr
PHALIAPI_03484	224308.BSU35850	8.45e-204	564.0	COG0561@1|root,COG0561@2|Bacteria,1V5FB@1239|Firmicutes,4HGY8@91061|Bacilli,1ZDBI@1386|Bacillus	91061|Bacilli	S	hydrolases of the HAD superfamily	ywtE	-	3.1.3.104	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R07280	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Hydrolase_3
PHALIAPI_03485	224308.BSU35860	1.53e-301	823.0	COG0791@1|root,COG0791@2|Bacteria,1V7MV@1239|Firmicutes,4HCQ2@91061|Bacilli,1ZBTD@1386|Bacillus	91061|Bacilli	M	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	pgdS	GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1,NLPC_P60
PHALIAPI_03486	224308.BSU35870	2.29e-29	104.0	29QU5@1|root,30BU5@2|Bacteria,1U8NV@1239|Firmicutes,4IIKX@91061|Bacilli,1ZNS6@1386|Bacillus	91061|Bacilli	-	-	ywtC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03487	224308.BSU35880	1.33e-277	758.0	COG2843@1|root,COG2843@2|Bacteria,1TSQG@1239|Firmicutes,4HCUP@91061|Bacilli,1ZQDC@1386|Bacillus	91061|Bacilli	M	enzyme of poly-gamma-glutamate biosynthesis (capsule formation)	capA	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
PHALIAPI_03488	224308.BSU35890	8.44e-91	267.0	29EG8@1|root,301E5@2|Bacteria,1V445@1239|Firmicutes,4HHXZ@91061|Bacilli,1ZGKP@1386|Bacillus	91061|Bacilli	S	biosynthesis protein	capC	-	-	ko:K22116	-	-	-	-	ko00000	-	-	-	Caps_synth_CapC
PHALIAPI_03489	224308.BSU35900	2.08e-283	774.0	COG0771@1|root,COG0771@2|Bacteria,1U01Y@1239|Firmicutes,4HDCH@91061|Bacilli,1ZDU1@1386|Bacillus	91061|Bacilli	M	COG0769 UDP-N-acetylmuramyl tripeptide synthase	capB	-	-	ko:K01932	-	-	-	-	ko00000,ko01000	-	-	-	Mur_ligase_M
PHALIAPI_03490	224308.BSU35910	7.36e-225	620.0	COG1609@1|root,COG1609@2|Bacteria,1TQ7K@1239|Firmicutes,4H9V1@91061|Bacilli,1ZC3W@1386|Bacillus	91061|Bacilli	K	transcriptional	rbsR	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
PHALIAPI_03491	224308.BSU35920	6.18e-205	567.0	COG0524@1|root,COG0524@2|Bacteria,1TQRC@1239|Firmicutes,4HA87@91061|Bacilli,1ZCQ4@1386|Bacillus	91061|Bacilli	H	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	rbsK	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704	2.7.1.15	ko:K00852	ko00030,map00030	-	R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
PHALIAPI_03492	224308.BSU35930	1.09e-82	245.0	COG1869@1|root,COG1869@2|Bacteria,1VA2V@1239|Firmicutes,4HIFW@91061|Bacilli,1ZGYM@1386|Bacillus	91061|Bacilli	G	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose	rbsD	GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015146,GO:0015399,GO:0015405,GO:0015407,GO:0015591,GO:0015608,GO:0015611,GO:0015749,GO:0015750,GO:0015752,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034219,GO:0042623,GO:0042626,GO:0043211,GO:0043492,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702	5.4.99.62	ko:K06726	ko02010,map02010	-	R08247	RC02247	ko00000,ko00001,ko01000	-	-	-	RbsD_FucU
PHALIAPI_03493	224308.BSU35940	0.0	946.0	COG1129@1|root,COG1129@2|Bacteria,1TP6I@1239|Firmicutes,4H9VK@91061|Bacilli,1ZB07@1386|Bacillus	91061|Bacilli	G	Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system	rbsA	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0006810,GO:0008144,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015146,GO:0015399,GO:0015405,GO:0015407,GO:0015591,GO:0015608,GO:0015611,GO:0015749,GO:0015750,GO:0015752,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034219,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043211,GO:0043492,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0097159,GO:0097367,GO:1901265,GO:1901363	3.6.3.17	ko:K10441	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	ABC_tran
PHALIAPI_03494	224308.BSU35950	2.75e-202	563.0	COG1172@1|root,COG1172@2|Bacteria,1TP72@1239|Firmicutes,4H9Y3@91061|Bacilli,1ZBAZ@1386|Bacillus	91061|Bacilli	G	Belongs to the binding-protein-dependent transport system permease family	rbsC	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944	-	ko:K10440	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2
PHALIAPI_03495	224308.BSU35960	1.28e-203	565.0	COG1879@1|root,COG1879@2|Bacteria,1TQ1B@1239|Firmicutes,4HCSN@91061|Bacilli,1ZD3D@1386|Bacillus	91061|Bacilli	G	COG1879 ABC-type sugar transport system, periplasmic component	rbsB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
PHALIAPI_03496	224308.BSU35970	3.97e-119	341.0	COG3103@1|root,COG3103@2|Bacteria	2|Bacteria	T	Sh3 type 3 domain protein	batE	-	-	-	-	-	-	-	-	-	-	-	BatD,Phenol_MetA_deg,SH3_3,SH3_4,TPR_16,TPR_2
PHALIAPI_03497	224308.BSU35980	2.17e-62	191.0	2E59K@1|root,3301W@2|Bacteria,1VF4H@1239|Firmicutes,4HPY9@91061|Bacilli,1ZQTK@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF3892)	ywsA	-	-	-	-	-	-	-	-	-	-	-	DUF3892
PHALIAPI_03498	224308.BSU35990	3.43e-123	351.0	COG2249@1|root,COG2249@2|Bacteria,1V4UF@1239|Firmicutes,4HH6R@91061|Bacilli,1ZGJ6@1386|Bacillus	91061|Bacilli	S	NADPH-quinone reductase (modulator of drug activity B)	ywrO	-	-	-	-	-	-	-	-	-	-	-	Flavodoxin_2
PHALIAPI_03499	224308.BSU36000	3.71e-187	519.0	COG3527@1|root,COG3527@2|Bacteria,1V4AH@1239|Firmicutes,4HHNB@91061|Bacilli,1ZQAI@1386|Bacillus	91061|Bacilli	H	Alpha-acetolactate decarboxylase	budA	GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0047605	4.1.1.5	ko:K01575	ko00650,ko00660,map00650,map00660	-	R02948	RC00812	ko00000,ko00001,ko01000	-	-	-	AAL_decarboxy
PHALIAPI_03500	224308.BSU36010	0.0	1113.0	COG0028@1|root,COG0028@2|Bacteria,1TQE8@1239|Firmicutes,4HAV1@91061|Bacilli,1ZE8P@1386|Bacillus	91061|Bacilli	EH	Belongs to the TPP enzyme family	alsS	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
PHALIAPI_03501	224308.BSU36020	3.36e-218	602.0	COG0583@1|root,COG0583@2|Bacteria,1TRVX@1239|Firmicutes,4HHXD@91061|Bacilli,1ZRMJ@1386|Bacillus	91061|Bacilli	K	LysR substrate binding domain	alsR	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
PHALIAPI_03502	224308.BSU36030	1.32e-278	764.0	COG1055@1|root,COG1055@2|Bacteria,1TPNN@1239|Firmicutes,4H9WV@91061|Bacilli,1ZBHC@1386|Bacillus	91061|Bacilli	P	Involved in arsenical resistance. Thought to form the channel of an arsenite pump	ywrK	-	-	ko:K03893	-	-	-	-	ko00000,ko02000	2.A.45.1,3.A.4.1	-	-	ArsB
PHALIAPI_03503	224308.BSU36040	3.04e-162	454.0	29H6Z@1|root,3044I@2|Bacteria,1V4SZ@1239|Firmicutes,4HHCE@91061|Bacilli,1ZFWE@1386|Bacillus	91061|Bacilli	-	-	ywrJ	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03504	224308.BSU36050	1.59e-175	499.0	2E48W@1|root,32Z4Q@2|Bacteria,1VF41@1239|Firmicutes,4HPBF@91061|Bacilli,1ZGKF@1386|Bacillus	91061|Bacilli	-	-	cotB	-	-	ko:K06325	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_03505	224308.BSU36060	1.47e-265	726.0	COG5337@1|root,COG5337@2|Bacteria,1U0PJ@1239|Firmicutes,4HBE4@91061|Bacilli,1ZD5Z@1386|Bacillus	91061|Bacilli	M	Spore Coat	cotH	-	-	ko:K06330	-	-	-	-	ko00000	-	-	-	CotH
PHALIAPI_03506	720555.BATR1942_15925	7.25e-18	84.0	29SRG@1|root,30DXD@2|Bacteria,1UBV7@1239|Firmicutes,4INAQ@91061|Bacilli,1ZN5C@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03507	224308.BSU36080	5.08e-142	401.0	COG1853@1|root,COG1853@2|Bacteria,1V52S@1239|Firmicutes,4HGD9@91061|Bacilli,1ZB1C@1386|Bacillus	91061|Bacilli	S	COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family	ywrF	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
PHALIAPI_03508	224308.BSU36090	1.09e-68	208.0	29SDM@1|root,30DIC@2|Bacteria,1UBBF@1239|Firmicutes,4IMQD@91061|Bacilli,1ZKM0@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF4181)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4181
PHALIAPI_03509	224308.BSU36100	0.0	1050.0	COG0405@1|root,COG0405@2|Bacteria,1TR9U@1239|Firmicutes,4HB23@91061|Bacilli,1ZCVJ@1386|Bacillus	91061|Bacilli	E	gamma-glutamyltransferase	ywrD	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
PHALIAPI_03510	224308.BSU36110	2.79e-107	309.0	COG1522@1|root,COG1522@2|Bacteria,1V1DR@1239|Firmicutes,4HFRT@91061|Bacilli,1ZG22@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ywrC	GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0043200,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2001141	-	ko:K03719	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
PHALIAPI_03511	224308.BSU36120	3.73e-131	373.0	COG2059@1|root,COG2059@2|Bacteria,1V43H@1239|Firmicutes,4IQZD@91061|Bacilli,1ZRPT@1386|Bacillus	91061|Bacilli	P	Chromate transporter	ywrB	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	iYO844.BSU36120	Chromate_transp
PHALIAPI_03512	224308.BSU36130	8.62e-114	327.0	COG2059@1|root,COG2059@2|Bacteria,1V2C2@1239|Firmicutes,4HFTN@91061|Bacilli,1ZR6K@1386|Bacillus	91061|Bacilli	P	COG2059 Chromate transport protein ChrA	ywrA	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
PHALIAPI_03513	326423.RBAM_033310	3.19e-152	429.0	COG1515@1|root,COG1515@2|Bacteria,1V1CJ@1239|Firmicutes,4HEAW@91061|Bacilli,1ZBJQ@1386|Bacillus	91061|Bacilli	L	DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA	nfi	-	3.1.21.7	ko:K05982	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	Endonuclease_5
PHALIAPI_03515	720555.BATR1942_16015	3.51e-98	308.0	COG4104@1|root,COG5444@1|root,COG4104@2|Bacteria,COG5444@2|Bacteria,1UJ8U@1239|Firmicutes,4HKX1@91061|Bacilli,1ZQPF@1386|Bacillus	91061|Bacilli	S	Pre-toxin TG	ywqJ	-	-	-	-	-	-	-	-	-	-	-	LXG,PT-TG
PHALIAPI_03516	1497679.EP56_01380	1.3e-23	91.3	2EKMX@1|root,33EBN@2|Bacteria,1VK5S@1239|Firmicutes,4HZK5@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03517	349520.PPE_01322	1.77e-26	105.0	2EDFK@1|root,337BU@2|Bacteria,1VFDV@1239|Firmicutes,4HSZD@91061|Bacilli,26ZMA@186822|Paenibacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03518	224308.BSU36190	3.64e-264	743.0	COG5444@1|root,COG5444@2|Bacteria,1V674@1239|Firmicutes,4HKPS@91061|Bacilli,1ZF5M@1386|Bacillus	91061|Bacilli	L	nucleic acid phosphodiester bond hydrolysis	-	-	-	-	-	-	-	-	-	-	-	-	Endonuclea_NS_2,LXG
PHALIAPI_03519	224308.BSU36200	2.17e-52	165.0	2ENUM@1|root,33GFQ@2|Bacteria,1VKUV@1239|Firmicutes,4HR78@91061|Bacilli	91061|Bacilli	S	Family of unknown function (DUF5344)	ywqI	-	-	-	-	-	-	-	-	-	-	-	DUF5344
PHALIAPI_03521	224308.BSU36220	4.51e-191	530.0	COG3878@1|root,COG3878@2|Bacteria,1V7GE@1239|Firmicutes,4HJ4G@91061|Bacilli,1ZF4W@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF1963)	ywqG	-	-	-	-	-	-	-	-	-	-	-	DUF1963
PHALIAPI_03522	224308.BSU36230	2.69e-312	851.0	COG1004@1|root,COG1004@2|Bacteria,1TQFN@1239|Firmicutes,4HADP@91061|Bacilli,1ZAP3@1386|Bacillus	91061|Bacilli	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	ywqF	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
PHALIAPI_03523	224308.BSU36240	1.75e-180	502.0	COG4464@1|root,COG4464@2|Bacteria,1TQ1T@1239|Firmicutes,4HDZR@91061|Bacilli,1ZDH3@1386|Bacillus	91061|Bacilli	GM	COG4464 Capsular polysaccharide biosynthesis protein	ywqE	-	3.1.3.48	ko:K01104	-	-	-	-	ko00000,ko01000	-	-	-	-
PHALIAPI_03524	224308.BSU36250	2.02e-157	442.0	COG0489@1|root,COG0489@2|Bacteria,1TS4R@1239|Firmicutes,4HCEN@91061|Bacilli,1ZB83@1386|Bacillus	91061|Bacilli	D	COG0489 ATPases involved in chromosome partitioning	ywqD	-	2.7.10.2	ko:K00903	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	AAA_31,CbiA,ParA
PHALIAPI_03525	224308.BSU36260	2.17e-162	456.0	COG3944@1|root,COG3944@2|Bacteria,1UZCR@1239|Firmicutes,4HE26@91061|Bacilli,1ZBJ4@1386|Bacillus	91061|Bacilli	M	biosynthesis protein	ywqC	-	-	ko:K19420	-	-	-	-	ko00000	-	-	-	GNVR,Wzz
PHALIAPI_03526	224308.BSU36269	7.28e-25	92.8	2BF9J@1|root,3292F@2|Bacteria,1UBE9@1239|Firmicutes,4IMSZ@91061|Bacilli,1ZKRV@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03527	224308.BSU36270	0.0	1050.0	COG4715@1|root,COG4715@2|Bacteria,1TSUG@1239|Firmicutes,4HBPY@91061|Bacilli,1ZR5V@1386|Bacillus	91061|Bacilli	S	SWIM zinc finger	ywqB	-	-	-	-	-	-	-	-	-	-	-	SWIM
PHALIAPI_03528	224308.BSU36280	0.0	1843.0	COG0553@1|root,COG0553@2|Bacteria,1TPFZ@1239|Firmicutes,4HAIF@91061|Bacilli,1ZBZT@1386|Bacillus	91061|Bacilli	L	COG0553 Superfamily II DNA RNA helicases, SNF2 family	ywqA	-	-	-	-	-	-	-	-	-	-	-	DUF3670,Helicase_C,SNF2_N
PHALIAPI_03529	224308.BSU36290	3.06e-201	557.0	COG0561@1|root,COG0561@2|Bacteria,1V5FB@1239|Firmicutes,4HGY8@91061|Bacilli,1ZDBI@1386|Bacillus	91061|Bacilli	S	hydrolases of the HAD superfamily	ywpJ	-	3.1.3.104	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R07280	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Hydrolase_3
PHALIAPI_03530	224308.BSU36300	4.82e-180	501.0	COG1349@1|root,COG1349@2|Bacteria,1V1VH@1239|Firmicutes,4HG12@91061|Bacilli,1ZEDB@1386|Bacillus	91061|Bacilli	K	COG1349 Transcriptional regulators of sugar metabolism	glcR	-	-	ko:K22103	-	-	-	-	ko00000,ko03000	-	-	-	DeoRC,HTH_DeoR
PHALIAPI_03531	224308.BSU36310	1.21e-75	226.0	COG0629@1|root,COG0629@2|Bacteria,1V797@1239|Firmicutes,4HJFJ@91061|Bacilli,1ZH3N@1386|Bacillus	91061|Bacilli	L	Single-stranded DNA-binding protein	ssbB	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
PHALIAPI_03532	224308.BSU36320	5.26e-88	258.0	29RI2@1|root,30CM1@2|Bacteria,1UA2P@1239|Firmicutes,4IKC3@91061|Bacilli,1ZGE4@1386|Bacillus	91061|Bacilli	-	-	ywpG	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03533	224308.BSU36330	2.95e-87	257.0	2E3V2@1|root,32YSB@2|Bacteria,1V8K8@1239|Firmicutes,4HMGU@91061|Bacilli,1ZEV0@1386|Bacillus	91061|Bacilli	S	YwpF-like protein	ywpF	-	-	-	-	-	-	-	-	-	-	-	YwpF
PHALIAPI_03534	1051501.AYTL01000028_gene2146	1.76e-108	317.0	COG3764@1|root,COG3764@2|Bacteria,1V4ZG@1239|Firmicutes,4HMUE@91061|Bacilli,1ZRFS@1386|Bacillus	91061|Bacilli	M	Sortase family	srtA	-	3.4.22.70	ko:K07284	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Sortase
PHALIAPI_03535	1051501.AYTL01000028_gene2145	0.0	3241.0	COG4932@1|root,COG4932@2|Bacteria,1TQBI@1239|Firmicutes,4HBAT@91061|Bacilli,1ZD6Z@1386|Bacillus	91061|Bacilli	M	cell wall anchor domain	-	-	-	-	-	-	-	-	-	-	-	-	Collagen_bind,Gram_pos_anchor
PHALIAPI_03536	1051501.AYTL01000028_gene2144	4.13e-222	616.0	COG3947@1|root,COG3947@2|Bacteria,1V85E@1239|Firmicutes,4HGJR@91061|Bacilli,1ZG1V@1386|Bacillus	91061|Bacilli	T	Transcriptional regulatory protein, C terminal	M1-574	-	-	-	-	-	-	-	-	-	-	-	BTAD,Response_reg,Trans_reg_C
PHALIAPI_03537	1051501.AYTL01000028_gene2143	0.0	1817.0	COG0642@1|root,COG0745@1|root,COG2972@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG2972@2|Bacteria,1TRIG@1239|Firmicutes,4HD8X@91061|Bacilli,1ZS5Y@1386|Bacillus	91061|Bacilli	T	Histidine kinase	ywpD	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISM_7TM,HATPase_c,HisKA,His_kinase,Response_reg
PHALIAPI_03538	224308.BSU36360	9.32e-77	230.0	COG1970@1|root,COG1970@2|Bacteria,1VA14@1239|Firmicutes,4HKIA@91061|Bacilli,1ZH44@1386|Bacillus	91061|Bacilli	M	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell	mscL	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066	-	ko:K03282	-	-	-	-	ko00000,ko02000	1.A.22.1	-	-	MscL
PHALIAPI_03539	1051501.AYTL01000028_gene2141	6.89e-107	308.0	COG0764@1|root,COG0764@2|Bacteria,1V6EX@1239|Firmicutes,4HGX1@91061|Bacilli,1ZFJ9@1386|Bacillus	91061|Bacilli	I	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs	fabZ	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
PHALIAPI_03540	224308.BSU36380	3.61e-244	672.0	COG0457@1|root,COG0457@2|Bacteria,1U3RZ@1239|Firmicutes,4IDJ0@91061|Bacilli,1ZF5Q@1386|Bacillus	91061|Bacilli	S	aspartate phosphatase	rapD	-	-	ko:K06362	-	-	-	-	ko00000,ko01000	-	-	-	TPR_12
PHALIAPI_03541	224308.BSU36390	1.37e-180	504.0	COG4786@1|root,COG4786@2|Bacteria,1TSYY@1239|Firmicutes,4HC6B@91061|Bacilli,1ZCIJ@1386|Bacillus	91061|Bacilli	N	flagellar basal body	flhP	GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588	-	ko:K02392	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
PHALIAPI_03542	224308.BSU36400	1.02e-171	481.0	COG4786@1|root,COG4786@2|Bacteria,1TRFQ@1239|Firmicutes,4HCKG@91061|Bacilli,1ZBEC@1386|Bacillus	91061|Bacilli	N	flagellar basal body	flhO	GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588	-	ko:K02392	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
PHALIAPI_03543	224308.BSU36410	1.75e-231	638.0	COG1077@1|root,COG1077@2|Bacteria,1TP51@1239|Firmicutes,4HA4S@91061|Bacilli,1ZC87@1386|Bacillus	91061|Bacilli	D	Rod shape-determining protein	mbl	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
PHALIAPI_03544	224308.BSU36420	4.88e-59	182.0	COG1609@1|root,COG1609@2|Bacteria,1VADF@1239|Firmicutes,4HKIY@91061|Bacilli,1ZGY1@1386|Bacillus	91061|Bacilli	K	Stage III sporulation protein D	spoIIID	-	-	ko:K06283	-	-	-	-	ko00000,ko03000	-	-	-	SpoIIID
PHALIAPI_03545	224308.BSU36440	8.45e-92	268.0	COG1846@1|root,COG1846@2|Bacteria,1VBQ1@1239|Firmicutes,4HMXC@91061|Bacilli,1ZIKI@1386|Bacillus	91061|Bacilli	K	COG1846 Transcriptional regulators	-	-	-	-	-	-	-	-	-	-	-	-	HTH_27,MarR,MarR_2
PHALIAPI_03546	224308.BSU36450	1.37e-269	739.0	COG0477@1|root,COG2814@2|Bacteria,1TQHD@1239|Firmicutes,4HBCZ@91061|Bacilli,1ZAUW@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	ywoG	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_1_like,MFS_2,Sugar_tr
PHALIAPI_03547	224308.BSU36460	2.5e-296	814.0	COG3420@1|root,COG3420@2|Bacteria,1UY76@1239|Firmicutes,4HCY7@91061|Bacilli,1ZDPG@1386|Bacillus	91061|Bacilli	P	Right handed beta helix region	ywoF	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,DUF1565
PHALIAPI_03548	224308.BSU36470	0.0	970.0	COG1953@1|root,COG1953@2|Bacteria,1TS5W@1239|Firmicutes,4HAIM@91061|Bacilli,1ZDNH@1386|Bacillus	91061|Bacilli	FH	COG1953 Cytosine uracil thiamine allantoin permeases	-	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0022857,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944	-	ko:K03457,ko:K10975	-	-	-	-	ko00000,ko02000	2.A.39,2.A.39.3.8	-	-	Transp_cyt_pur
PHALIAPI_03549	224308.BSU36480	8.92e-306	836.0	COG0477@1|root,COG0477@2|Bacteria,1UIYG@1239|Firmicutes,4ISX7@91061|Bacilli,1ZAWC@1386|Bacillus	91061|Bacilli	EGP	Major facilitator superfamily	ywoD	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1
PHALIAPI_03550	224308.BSU36490	1.48e-133	378.0	COG1335@1|root,COG1335@2|Bacteria,1V4UN@1239|Firmicutes,4HH38@91061|Bacilli,1ZG0P@1386|Bacillus	91061|Bacilli	Q	Isochorismatase family	yjgF	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
PHALIAPI_03551	224308.BSU36500	3.55e-101	293.0	2CDZ7@1|root,310W6@2|Bacteria,1VY2S@1239|Firmicutes,4HWZM@91061|Bacilli,1ZGUV@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03552	224308.BSU36510	1.6e-288	788.0	COG0004@1|root,COG0004@2|Bacteria,1TQYG@1239|Firmicutes,4HBGK@91061|Bacilli,1ZB5S@1386|Bacillus	91061|Bacilli	P	Ammonium transporter	nrgA	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	iYO844.BSU36510	Ammonium_transp
PHALIAPI_03553	224308.BSU36520	4.51e-77	229.0	COG0347@1|root,COG0347@2|Bacteria,1V9Z5@1239|Firmicutes,4HM5G@91061|Bacilli,1ZGHT@1386|Bacillus	91061|Bacilli	K	Belongs to the P(II) protein family	nrgB	-	-	ko:K04751	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	P-II
PHALIAPI_03554	224308.BSU36530	4.95e-134	380.0	COG0671@1|root,COG0671@2|Bacteria,1VARM@1239|Firmicutes,4HN1F@91061|Bacilli,1ZGFZ@1386|Bacillus	91061|Bacilli	I	COG0671 Membrane-associated phospholipid phosphatase	bcrC	-	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
PHALIAPI_03555	224308.BSU36540	6.63e-95	276.0	2E5BV@1|root,3303W@2|Bacteria,1VGUK@1239|Firmicutes,4HQU7@91061|Bacilli,1ZHPH@1386|Bacillus	91061|Bacilli	S	VanZ like family	ywnJ	-	-	-	-	-	-	-	-	-	-	-	VanZ
PHALIAPI_03556	1051501.AYTL01000028_gene2123	2.51e-159	452.0	COG0739@1|root,COG0739@2|Bacteria,1V7CU@1239|Firmicutes,4HCZJ@91061|Bacilli,1ZC61@1386|Bacillus	91061|Bacilli	M	COG0739 Membrane proteins related to metalloendopeptidases	spoIIQ	GO:0005575,GO:0005623,GO:0042601,GO:0042763,GO:0044464	-	ko:K06386	-	-	-	-	ko00000	1.A.34.1.1	-	-	Peptidase_M23
PHALIAPI_03557	224308.BSU36560	1.74e-113	325.0	COG1247@1|root,COG1247@2|Bacteria,1V3V3@1239|Firmicutes,4HHNY@91061|Bacilli,1ZFR7@1386|Bacillus	91061|Bacilli	M	COG1247 Sortase and related acyltransferases	ywnH	GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	2.3.1.183	ko:K03823	ko00440,ko01130,map00440,map01130	-	R08871,R08938	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_3,Acetyltransf_4
PHALIAPI_03558	720555.BATR1942_16260	1.79e-21	91.7	2EKMP@1|root,33EBE@2|Bacteria,1VQNN@1239|Firmicutes,4HSNG@91061|Bacilli,1ZG44@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5362)	ywnC	-	-	-	-	-	-	-	-	-	-	-	DUF5362
PHALIAPI_03559	1227352.C173_09253	9.51e-234	665.0	COG1861@1|root,COG2089@1|root,COG1861@2|Bacteria,COG2089@2|Bacteria,1VSGK@1239|Firmicutes,4HV78@91061|Bacilli,270KB@186822|Paenibacillaceae	91061|Bacilli	M	NeuB family	-	-	-	-	-	-	-	-	-	-	-	-	CTP_transf_3,NeuB
PHALIAPI_03560	224308.BSU36580	7.07e-92	269.0	2E4P1@1|root,32ZHT@2|Bacteria,1VF8Y@1239|Firmicutes,4HQ3Y@91061|Bacilli,1ZJ57@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5392)	ywnF	-	-	-	-	-	-	-	-	-	-	-	DUF5392
PHALIAPI_03561	224308.BSU36590	0.0	957.0	COG1502@1|root,COG1502@2|Bacteria,1TPKY@1239|Firmicutes,4H9TI@91061|Bacilli,1ZBG7@1386|Bacillus	91061|Bacilli	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	ywnE	GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0032502,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576	-	ko:K06131	ko00564,ko01100,map00564,map01100	-	R07390	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2,PLDc_N
PHALIAPI_03562	224308.BSU36600	4.85e-184	511.0	COG0789@1|root,COG0789@2|Bacteria,1TS6Z@1239|Firmicutes,4HCVW@91061|Bacilli,1ZBMT@1386|Bacillus	91061|Bacilli	K	transcriptional	mta	-	-	ko:K21743	-	-	-	-	ko00000,ko03000	-	-	-	MerR_1,TipAS
PHALIAPI_03563	224308.BSU36610	1.24e-77	232.0	2EKMP@1|root,33EBE@2|Bacteria,1VQNN@1239|Firmicutes,4HSNG@91061|Bacilli,1ZG44@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5362)	ywnC	-	-	-	-	-	-	-	-	-	-	-	DUF5362
PHALIAPI_03564	224308.BSU36620	1.76e-146	413.0	COG2910@1|root,COG2910@2|Bacteria,1TZ3T@1239|Firmicutes,4HAJ4@91061|Bacilli,1ZESA@1386|Bacillus	91061|Bacilli	S	NAD(P)H-binding	ywnB	-	-	ko:K07118	-	-	-	-	ko00000	-	-	-	NAD_binding_10
PHALIAPI_03565	224308.BSU36630	4.58e-85	251.0	COG1959@1|root,COG1959@2|Bacteria,1V6FK@1239|Firmicutes,4HKZD@91061|Bacilli,1ZHA4@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ywnA	-	-	-	-	-	-	-	-	-	-	-	Rrf2
PHALIAPI_03566	224308.BSU36640	0.0	1129.0	COG0804@1|root,COG0804@2|Bacteria,1TPQP@1239|Firmicutes,4HBTS@91061|Bacilli,1ZDMR@1386|Bacillus	91061|Bacilli	E	Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family	ureC	-	3.5.1.5	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	-	R00131	RC02798,RC02806	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1,Urease_alpha
PHALIAPI_03567	224308.BSU36650	1.85e-82	244.0	COG0832@1|root,COG0832@2|Bacteria,1VAIA@1239|Firmicutes,4HM0I@91061|Bacilli,1ZH2P@1386|Bacillus	91061|Bacilli	E	Belongs to the urease beta subunit family	ureB	-	3.5.1.5	ko:K01429	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	-	R00131	RC02798,RC02806	ko00000,ko00001,ko01000	-	-	-	Urease_beta
PHALIAPI_03568	224308.BSU36660	1.66e-67	204.0	COG0831@1|root,COG0831@2|Bacteria,1V7GU@1239|Firmicutes,4HIJS@91061|Bacilli,1ZH3M@1386|Bacillus	91061|Bacilli	E	Belongs to the urease gamma subunit family	ureA	-	3.5.1.5	ko:K01430	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	-	R00131	RC02798,RC02806	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS11965,iYO844.BSU36660	Urease_gamma
PHALIAPI_03569	1051501.AYTL01000028_gene2105	1.89e-25	101.0	COG0410@1|root,COG0410@2|Bacteria,1TPW4@1239|Firmicutes,4HABJ@91061|Bacilli,1ZBFK@1386|Bacillus	91061|Bacilli	E	COG0410 ABC-type branched-chain amino acid transport systems, ATPase component	-	-	-	ko:K11963	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	ABC_tran
PHALIAPI_03570	224308.BSU36670	1.11e-21	85.9	COG3237@1|root,COG3237@2|Bacteria	2|Bacteria	K	CsbD-like	csbD	-	-	-	-	-	-	-	-	-	-	-	CsbD
PHALIAPI_03571	224308.BSU36680	6.49e-109	316.0	COG1994@1|root,COG1994@2|Bacteria,1V8QC@1239|Firmicutes,4HK02@91061|Bacilli,1ZQQW@1386|Bacillus	91061|Bacilli	S	Peptidase M50	ywmF	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M50
PHALIAPI_03572	1051501.AYTL01000027_gene816	1.16e-126	376.0	COG0457@1|root,COG0457@2|Bacteria,1UUXQ@1239|Firmicutes,4I402@91061|Bacilli,1ZDKN@1386|Bacillus	91061|Bacilli	S	Response regulator aspartate phosphatase	rapA	-	-	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	-	-	TPR_12,TPR_16
PHALIAPI_03573	224308.BSU36700	1.08e-245	674.0	COG2896@1|root,COG2896@2|Bacteria,1TP89@1239|Firmicutes,4HAKQ@91061|Bacilli,1ZCD4@1386|Bacillus	91061|Bacilli	H	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate	moaA	-	4.1.99.22	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09394	RC03420	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Fer4_14,Mob_synth_C,Radical_SAM
PHALIAPI_03574	224308.BSU36710	5.24e-186	517.0	COG1526@1|root,COG1526@2|Bacteria,1TU8R@1239|Firmicutes,4HAY8@91061|Bacilli,1ZBNJ@1386|Bacillus	91061|Bacilli	C	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH	fdhD	-	-	ko:K02379	-	-	-	-	ko00000	-	-	-	FdhD-NarQ
PHALIAPI_03576	224308.BSU36730	1.02e-155	437.0	COG2304@1|root,COG2304@2|Bacteria,1UZKX@1239|Firmicutes,4HCSC@91061|Bacilli,1ZBWZ@1386|Bacillus	91061|Bacilli	S	protein containing a von Willebrand factor type A (vWA) domain	ywmD	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VWA
PHALIAPI_03577	224308.BSU36740	1.89e-157	442.0	COG2304@1|root,COG2304@2|Bacteria,1UZKX@1239|Firmicutes,4HCSC@91061|Bacilli,1ZD9C@1386|Bacillus	91061|Bacilli	S	protein containing a von Willebrand factor type A (vWA) domain	ywmC	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VWA
PHALIAPI_03578	224308.BSU36750	2.8e-233	643.0	COG2385@1|root,COG2385@2|Bacteria,1TQSI@1239|Firmicutes,4HCE3@91061|Bacilli,1ZBNU@1386|Bacillus	91061|Bacilli	D	Stage II sporulation protein D	spoIID	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K06381	-	-	-	-	ko00000	-	-	-	SpoIID
PHALIAPI_03579	224308.BSU36760	4.96e-306	835.0	COG0766@1|root,COG0766@2|Bacteria,1TPAU@1239|Firmicutes,4H9KI@91061|Bacilli,1ZB89@1386|Bacillus	91061|Bacilli	M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine	murA	-	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R00660	RC00350	ko00000,ko00001,ko01000,ko01011	-	-	-	EPSP_synthase
PHALIAPI_03580	224308.BSU36770	1.97e-173	484.0	2DSIK@1|root,33GA6@2|Bacteria,1VN6K@1239|Firmicutes,4HSJR@91061|Bacilli,1ZHV5@1386|Bacillus	91061|Bacilli	S	TATA-box binding	ywmB	-	-	-	-	-	-	-	-	-	-	-	DUF1779
PHALIAPI_03581	224308.BSU36780	1.07e-43	142.0	COG4836@1|root,COG4836@2|Bacteria,1VK5C@1239|Firmicutes,4HR8D@91061|Bacilli,1ZJ1E@1386|Bacillus	91061|Bacilli	S	membrane	ywzB	-	-	-	-	-	-	-	-	-	-	-	DUF1146
PHALIAPI_03582	224308.BSU36790	2.05e-113	325.0	28YPI@1|root,2ZKH3@2|Bacteria,1W4TC@1239|Firmicutes,4IJT1@91061|Bacilli,1ZE76@1386|Bacillus	91061|Bacilli	-	-	ywmA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03583	224308.BSU36800	1.65e-73	222.0	COG0355@1|root,COG0355@2|Bacteria,1VA89@1239|Firmicutes,4HKHS@91061|Bacilli,1ZGET@1386|Bacillus	91061|Bacilli	C	Produces ATP from ADP in the presence of a proton gradient across the membrane	atpC	GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_DE,ATP-synt_DE_N
PHALIAPI_03584	224308.BSU36810	0.0	924.0	COG0055@1|root,COG0055@2|Bacteria,1TPGF@1239|Firmicutes,4HAT6@91061|Bacilli,1ZB62@1386|Bacillus	91061|Bacilli	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits	atpD	-	3.6.3.14	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	iSB619.SA_RS10965	ATP-synt_ab,ATP-synt_ab_N
PHALIAPI_03585	224308.BSU36820	3.67e-194	540.0	COG0224@1|root,COG0224@2|Bacteria,1TPBX@1239|Firmicutes,4HB0E@91061|Bacilli,1ZCKT@1386|Bacillus	91061|Bacilli	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex	atpG	-	-	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	iSB619.SA_RS10970,iYO844.BSU36820	ATP-synt
PHALIAPI_03586	224308.BSU36830	0.0	969.0	COG0056@1|root,COG0056@2|Bacteria,1TNZ8@1239|Firmicutes,4HAMZ@91061|Bacilli,1ZB13@1386|Bacillus	91061|Bacilli	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit	atpA	-	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	iSB619.SA_RS10975	ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N
PHALIAPI_03587	224308.BSU36840	3.23e-115	331.0	COG0712@1|root,COG0712@2|Bacteria,1VAG3@1239|Firmicutes,4HKFW@91061|Bacilli,1ZG65@1386|Bacillus	91061|Bacilli	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpH	-	-	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	OSCP
PHALIAPI_03588	224308.BSU36850	2.62e-79	239.0	COG0711@1|root,COG0711@2|Bacteria,1VB85@1239|Firmicutes,4HM64@91061|Bacilli,1ZGHN@1386|Bacillus	91061|Bacilli	C	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)	atpF	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	iYO844.BSU36850	ATP-synt_B
PHALIAPI_03589	1051501.AYTL01000028_gene2080	3.01e-36	123.0	COG0636@1|root,COG0636@2|Bacteria,1VEHP@1239|Firmicutes,4HNKQ@91061|Bacilli,1ZIWP@1386|Bacillus	91061|Bacilli	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpE	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_C
PHALIAPI_03590	224308.BSU36870	6.06e-167	467.0	COG0356@1|root,COG0356@2|Bacteria,1TQIT@1239|Firmicutes,4H9NV@91061|Bacilli,1ZB02@1386|Bacillus	91061|Bacilli	C	it plays a direct role in the translocation of protons across the membrane	atpB	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko03110	3.A.2.1	-	-	ATP-synt_A
PHALIAPI_03591	224308.BSU36880	1.91e-81	241.0	2E2UM@1|root,32HZ5@2|Bacteria,1V9N6@1239|Firmicutes,4HK0H@91061|Bacilli,1ZQSH@1386|Bacillus	91061|Bacilli	S	ATP synthase	atpI	-	-	ko:K02116	-	-	-	-	ko00000,ko00194	3.A.2.1	-	-	ATP-synt_I
PHALIAPI_03592	224308.BSU36890	5.5e-148	416.0	COG0035@1|root,COG0035@2|Bacteria,1TPMT@1239|Firmicutes,4H9Y0@91061|Bacilli,1ZASG@1386|Bacillus	91061|Bacilli	F	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate	upp	GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.4.2.9	ko:K00761	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS11010	UPRTase
PHALIAPI_03593	224308.BSU36900	4.36e-303	826.0	COG0112@1|root,COG0112@2|Bacteria,1TQVM@1239|Firmicutes,4HA5K@91061|Bacilli,1ZB9V@1386|Bacillus	91061|Bacilli	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
PHALIAPI_03594	224308.BSU36910	2.49e-123	352.0	COG4475@1|root,COG4475@2|Bacteria,1V3H0@1239|Firmicutes,4HH6F@91061|Bacilli,1ZFKM@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0340 family	ywlG	-	-	-	-	-	-	-	-	-	-	-	DUF436
PHALIAPI_03595	1051501.AYTL01000028_gene2074	2.35e-106	306.0	COG0698@1|root,COG0698@2|Bacteria,1V3HE@1239|Firmicutes,4HGXD@91061|Bacilli,1ZFM4@1386|Bacillus	91061|Bacilli	G	Ribose 5-phosphate isomerase	rpiB	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	LacAB_rpiB
PHALIAPI_03596	224308.BSU36930	1.58e-100	291.0	COG0394@1|root,COG0394@2|Bacteria,1VA05@1239|Firmicutes,4HKBQ@91061|Bacilli,1ZH51@1386|Bacillus	91061|Bacilli	T	Belongs to the low molecular weight phosphotyrosine protein phosphatase family	ywlE	-	3.1.3.48,3.9.1.2	ko:K01104,ko:K20201	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
PHALIAPI_03597	224308.BSU36940	4.56e-117	336.0	COG1971@1|root,COG1971@2|Bacteria,1V4QK@1239|Firmicutes,4HH7C@91061|Bacilli,1ZFK0@1386|Bacillus	91061|Bacilli	P	Probably functions as a manganese efflux pump	mntP	-	-	-	-	-	-	-	-	-	-	-	Mntp
PHALIAPI_03598	224308.BSU36950	2.36e-247	679.0	COG0009@1|root,COG0009@2|Bacteria,1TP1I@1239|Firmicutes,4HA7W@91061|Bacilli,1ZB2V@1386|Bacillus	91061|Bacilli	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	ywlC	GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
PHALIAPI_03599	224308.BSU36960	1.79e-100	291.0	COG1246@1|root,COG1246@2|Bacteria,1U9KN@1239|Firmicutes,4IKY0@91061|Bacilli,1ZIA8@1386|Bacillus	91061|Bacilli	E	Belongs to the acetyltransferase family. ArgA subfamily	ywlB	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03600	224308.BSU36970	1.14e-152	429.0	2AUKD@1|root,31K93@2|Bacteria,1V6PK@1239|Firmicutes,4HI5F@91061|Bacilli,1ZEE3@1386|Bacillus	91061|Bacilli	S	stage II sporulation protein R	spoIIR	-	-	ko:K06387	-	-	-	-	ko00000	-	-	-	Spore_II_R
PHALIAPI_03601	224308.BSU36980	9.69e-74	221.0	2B1TR@1|root,31U9Q@2|Bacteria,1UCW8@1239|Firmicutes,4IPC8@91061|Bacilli,1ZPPX@1386|Bacillus	91061|Bacilli	S	Uncharacterised protein family (UPF0715)	ywlA	-	-	-	-	-	-	-	-	-	-	-	UPF0715
PHALIAPI_03603	224308.BSU37000	2.42e-204	565.0	COG2890@1|root,COG2890@2|Bacteria,1TSMA@1239|Firmicutes,4HC6W@91061|Bacilli,1ZBSE@1386|Bacillus	91061|Bacilli	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	prmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS
PHALIAPI_03604	224308.BSU37010	9.95e-245	673.0	COG0216@1|root,COG0216@2|Bacteria,1TQ7V@1239|Firmicutes,4H9MB@91061|Bacilli,1ZCE9@1386|Bacillus	91061|Bacilli	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
PHALIAPI_03605	224308.BSU37020	4.84e-89	261.0	COG0346@1|root,COG0346@2|Bacteria,1V6XU@1239|Firmicutes,4HIFI@91061|Bacilli,1ZHFW@1386|Bacillus	91061|Bacilli	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	ywkD	-	-	ko:K08234	-	-	-	-	ko00000	-	-	-	Glyoxalase
PHALIAPI_03606	224308.BSU37030	2.25e-112	324.0	COG0789@1|root,COG0789@2|Bacteria,1VH5D@1239|Firmicutes,4HQ0J@91061|Bacilli,1ZG6F@1386|Bacillus	91061|Bacilli	K	Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure	racA	-	-	ko:K11686	-	-	-	-	ko00000,ko03036	-	-	-	MerR_1
PHALIAPI_03607	224308.BSU37040	3.24e-204	568.0	COG0679@1|root,COG0679@2|Bacteria,1VDS9@1239|Firmicutes,4HQT5@91061|Bacilli,1ZDDW@1386|Bacillus	91061|Bacilli	S	Membrane transport protein	ywkB	-	-	ko:K07088	-	-	-	-	ko00000	-	-	-	Mem_trans
PHALIAPI_03608	224308.BSU37050	0.0	1099.0	COG0281@1|root,COG0281@2|Bacteria,1TPJ3@1239|Firmicutes,4HBF1@91061|Bacilli,1ZQEV@1386|Bacillus	91061|Bacilli	C	malic enzyme	ykwA	GO:0003674,GO:0003824,GO:0004470,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006090,GO:0006108,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016614,GO:0016615,GO:0019752,GO:0032787,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071704	1.1.1.38	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	-	R00214	RC00105	ko00000,ko00001,ko01000	-	-	-	Malic_M,malic
PHALIAPI_03609	224308.BSU37060	9.96e-135	382.0	COG1435@1|root,COG1435@2|Bacteria,1TRVM@1239|Firmicutes,4HA4A@91061|Bacilli,1ZBMX@1386|Bacillus	91061|Bacilli	F	thymidine kinase	tdk	GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.1.21	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01567,R02099,R08233	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	iYO844.BSU37060	TK
PHALIAPI_03610	1051501.AYTL01000028_gene2059	7e-45	144.0	COG0254@1|root,COG0254@2|Bacteria,1VEGU@1239|Firmicutes,4HNQF@91061|Bacilli,1ZQBD@1386|Bacillus	91061|Bacilli	J	Binds the 23S rRNA	rpmE	-	-	ko:K02909	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L31
PHALIAPI_03611	224308.BSU37080	5.53e-303	827.0	COG1158@1|root,COG1158@2|Bacteria,1TPHZ@1239|Firmicutes,4H9XB@91061|Bacilli,1ZBN9@1386|Bacillus	91061|Bacilli	K	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template	rho	-	-	ko:K03628	ko03018,map03018	-	-	-	ko00000,ko00001,ko03019,ko03021	-	-	-	ATP-synt_ab,Rho_N,Rho_RNA_bind
PHALIAPI_03612	224308.BSU37090	2.03e-224	619.0	COG1494@1|root,COG1494@2|Bacteria,1TP0D@1239|Firmicutes,4H9MV@91061|Bacilli,1ZC28@1386|Bacillus	91061|Bacilli	G	fructose-1,6-bisphosphatase	glpX	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576	3.1.3.11	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00165,M00167	R00762,R04780	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FBPase_glpX
PHALIAPI_03613	224308.BSU37100	2.26e-303	828.0	COG0766@1|root,COG0766@2|Bacteria,1TPAU@1239|Firmicutes,4H9KI@91061|Bacilli,1ZASB@1386|Bacillus	91061|Bacilli	M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine	murA	GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042221,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0070589,GO:0070887,GO:0071236,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R00660	RC00350	ko00000,ko00001,ko01000,ko01011	-	-	iYO844.BSU37100	EPSP_synthase
PHALIAPI_03614	224308.BSU37110	5.69e-147	414.0	COG0176@1|root,COG0176@2|Bacteria,1TP4Q@1239|Firmicutes,4HA8G@91061|Bacilli,1ZCA6@1386|Bacillus	91061|Bacilli	G	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	tal	GO:0003674,GO:0005488,GO:0005515,GO:0042802	2.2.1.2	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01827	RC00439,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU37110	TAL_FSA
PHALIAPI_03615	224308.BSU37120	7.82e-204	564.0	COG0191@1|root,COG0191@2|Bacteria,1TQ01@1239|Firmicutes,4H9ZU@91061|Bacilli,1ZBBA@1386|Bacillus	91061|Bacilli	G	Aldolase	fbaA	-	4.1.2.13,4.1.2.29	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167,M00344,M00345	R01068,R01070,R01829,R02568,R05378	RC00438,RC00439,RC00603,RC00604,RC00721	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU39670	F_bP_aldolase
PHALIAPI_03616	1051501.AYTL01000028_gene2053	1.07e-81	242.0	COG2204@1|root,COG2204@2|Bacteria,1V6R9@1239|Firmicutes,4HICG@91061|Bacilli,1ZQRZ@1386|Bacillus	91061|Bacilli	T	COG0784 FOG CheY-like receiver	spo0F	-	-	ko:K02490	ko02020,ko02024,map02020,map02024	M00485	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg
PHALIAPI_03617	224308.BSU37140	1.29e-117	337.0	COG4821@1|root,COG4821@2|Bacteria,1VJUP@1239|Firmicutes,4HP1J@91061|Bacilli,1ZH7S@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF2529)	ywjG	-	-	-	-	-	-	-	-	-	-	-	DUF2529
PHALIAPI_03618	224308.BSU37150	0.0	1073.0	COG0504@1|root,COG0504@2|Bacteria,1TP34@1239|Firmicutes,4H9X6@91061|Bacilli,1ZB0S@1386|Bacillus	91061|Bacilli	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_synth_N,GATase
PHALIAPI_03619	224308.BSU37160	4.85e-81	244.0	COG3343@1|root,COG3343@2|Bacteria,1V6WX@1239|Firmicutes,4HIUK@91061|Bacilli,1ZH95@1386|Bacillus	91061|Bacilli	K	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling	rpoE	GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576	-	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	-	-	-	HARE-HTH
PHALIAPI_03620	224308.BSU37170	1.21e-268	736.0	COG1960@1|root,COG1960@2|Bacteria,1TP57@1239|Firmicutes,4HA2A@91061|Bacilli,1ZBG3@1386|Bacillus	91061|Bacilli	I	acyl-CoA dehydrogenase	acdA	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
PHALIAPI_03621	224308.BSU37180	0.0	1397.0	COG0247@1|root,COG2181@1|root,COG0247@2|Bacteria,COG2181@2|Bacteria,1TPG1@1239|Firmicutes,4HB2J@91061|Bacilli,1ZBAJ@1386|Bacillus	91061|Bacilli	C	COG0247 Fe-S oxidoreductase	ywjF	-	-	-	-	-	-	-	-	-	-	-	CCG,Fer4_8
PHALIAPI_03622	224308.BSU37190	5.54e-286	781.0	COG1502@1|root,COG1502@2|Bacteria,1USPT@1239|Firmicutes,4HCJD@91061|Bacilli,1ZC77@1386|Bacillus	91061|Bacilli	I	Belongs to the phospholipase D family. Cardiolipin synthase subfamily	clsB	GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0032502,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576	-	ko:K06131	ko00564,ko01100,map00564,map01100	-	R07390	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2
PHALIAPI_03623	224308.BSU37200	8.09e-235	645.0	COG4294@1|root,COG4294@2|Bacteria,1TTCB@1239|Firmicutes,4H9PY@91061|Bacilli,1ZCJ7@1386|Bacillus	91061|Bacilli	L	Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion	uvsE	-	-	ko:K13281	-	-	-	-	ko00000,ko01000	-	-	-	UvdE
PHALIAPI_03624	224308.BSU37210	1.32e-57	178.0	29S1C@1|root,30D5T@2|Bacteria,1UAW5@1239|Firmicutes,4IM8Y@91061|Bacilli,1ZJHN@1386|Bacillus	91061|Bacilli	-	-	ywjC	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03625	224308.BSU37220	4.52e-123	350.0	COG0262@1|root,COG0262@2|Bacteria,1VAUA@1239|Firmicutes,4HH71@91061|Bacilli,1ZEDJ@1386|Bacillus	91061|Bacilli	H	RibD C-terminal domain	ywjB	-	-	-	-	-	-	-	-	-	-	-	RibD_C
PHALIAPI_03626	224308.BSU37230	0.0	1115.0	COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4HA3S@91061|Bacilli,1ZBV0@1386|Bacillus	91061|Bacilli	V	ABC transporter	ywjA	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
PHALIAPI_03627	224308.BSU37240	0.0	985.0	COG1502@1|root,COG1502@2|Bacteria,1TPKY@1239|Firmicutes,4H9TI@91061|Bacilli,1ZBG7@1386|Bacillus	91061|Bacilli	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	ywiE	GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576	-	ko:K06131	ko00564,ko01100,map00564,map01100	-	R07390	RC00017	ko00000,ko00001,ko01000	-	-	iYO844.BSU37240	PLDc_2,PLDc_N
PHALIAPI_03628	224308.BSU37250	3.42e-158	443.0	COG2181@1|root,COG2181@2|Bacteria,1V6BS@1239|Firmicutes,4HTW9@91061|Bacilli,1ZR0N@1386|Bacillus	91061|Bacilli	C	Nitrate reductase (gamma	narI	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363	1.7.5.1	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	M00529,M00530	R00798,R01106,R09497	RC02812	ko00000,ko00001,ko00002,ko01000	5.A.3.1	-	-	Nitrate_red_gam
PHALIAPI_03629	224308.BSU37260	5.59e-122	348.0	COG2180@1|root,COG2180@2|Bacteria,1V4I4@1239|Firmicutes,4HHY3@91061|Bacilli,1ZHHD@1386|Bacillus	91061|Bacilli	C	nitrate reductase	narJ	-	-	ko:K00373	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	iYO844.BSU37260	Nitrate_red_del
PHALIAPI_03630	224308.BSU37270	0.0	1022.0	COG1140@1|root,COG1140@2|Bacteria,1TRGG@1239|Firmicutes,4HAR2@91061|Bacilli,1ZCJ2@1386|Bacillus	91061|Bacilli	C	Nitrate reductase, beta	narH	-	1.7.5.1	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	M00529,M00530,M00804	R00798,R01106,R09497	RC02812	ko00000,ko00001,ko00002,ko01000	5.A.3.1	-	-	Fer4_11,Nitr_red_bet_C
PHALIAPI_03631	224308.BSU37280	0.0	2536.0	COG5013@1|root,COG5013@2|Bacteria,1TQG1@1239|Firmicutes,4HBVB@91061|Bacilli,1ZC1Z@1386|Bacillus	91061|Bacilli	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	narG	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.7.5.1	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	M00529,M00530,M00804	R00798,R01106,R09497	RC02812	ko00000,ko00001,ko00002,ko01000	5.A.3.1	-	-	Molybdopterin,Molydop_binding,Nitr_red_alph_N
PHALIAPI_03632	224308.BSU37290	8.67e-111	318.0	COG0664@1|root,COG0664@2|Bacteria	2|Bacteria	T	cyclic nucleotide binding	arfM	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	cNMP_binding
PHALIAPI_03633	224308.BSU37300	5.27e-179	497.0	28NT3@1|root,2ZBRV@2|Bacteria,1UPQD@1239|Firmicutes,4IV8Z@91061|Bacilli,1ZSJV@1386|Bacillus	91061|Bacilli	S	YwiC-like protein	ywiC	-	-	-	-	-	-	-	-	-	-	-	YwiC
PHALIAPI_03634	224308.BSU37310	2.3e-168	470.0	COG0664@1|root,COG0664@2|Bacteria,1V1UY@1239|Firmicutes,4HFSF@91061|Bacilli,1ZQCG@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, cAMP Regulatory protein	fnr	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
PHALIAPI_03635	224308.BSU37320	5.61e-273	748.0	COG2223@1|root,COG2223@2|Bacteria,1TRS9@1239|Firmicutes,4HCY1@91061|Bacilli,1ZBQH@1386|Bacillus	91061|Bacilli	P	COG2223 Nitrate nitrite transporter	narK	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K02575	ko00910,map00910	M00615	-	-	ko00000,ko00001,ko00002,ko02000	2.A.1.8	-	iYO844.BSU37320	MFS_1,PAS_9
PHALIAPI_03636	224308.BSU37330	0.0	1105.0	COG0018@1|root,COG0018@2|Bacteria,1TPEZ@1239|Firmicutes,4HAR3@91061|Bacilli,1ZBP1@1386|Bacillus	91061|Bacilli	J	Arginyl-tRNA synthetase	argS	GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.19	ko:K01887	ko00970,map00970	M00359,M00360	R03646	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d
PHALIAPI_03637	224308.BSU37340	4.64e-96	280.0	COG4506@1|root,COG4506@2|Bacteria,1VK4E@1239|Firmicutes,4HR38@91061|Bacilli,1ZHXY@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ywiB	-	-	-	-	-	-	-	-	-	-	-	DUF1934
PHALIAPI_03638	1035184.HMPREF1042_0020	3.71e-12	60.8	2DY3G@1|root,347YK@2|Bacteria,1VZEE@1239|Firmicutes,4HZ9Z@91061|Bacilli,42EF5@671232|Streptococcus anginosus group	91061|Bacilli	S	Bacteriocin subtilosin A	-	-	-	-	-	-	-	-	-	-	-	-	Subtilosin_A
PHALIAPI_03639	224308.BSU37370	0.0	931.0	COG0535@1|root,COG0535@2|Bacteria,1TR52@1239|Firmicutes,4HAY2@91061|Bacilli,1ZBK3@1386|Bacillus	91061|Bacilli	C	Fe-S oxidoreductases	-	-	-	ko:K22227	-	-	-	-	ko00000	-	-	-	Fer4_12,Fer4_14,PqqD,Radical_SAM,SPASM
PHALIAPI_03641	224308.BSU37390	6.11e-169	472.0	COG1131@1|root,COG1131@2|Bacteria,1TQIH@1239|Firmicutes,4HCT1@91061|Bacilli,1ZCRH@1386|Bacillus	91061|Bacilli	V	ABC transporter	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_03642	224308.BSU37400	8.05e-296	809.0	COG0474@1|root,COG0474@2|Bacteria	2|Bacteria	P	ATPase, P-type transporting, HAD superfamily, subfamily IC	mgtA	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0099131,GO:0099132	3.6.3.2	ko:K01531,ko:K16905	ko02010,map02010	M00224	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1,3.A.3.4	-	iSF_1195.SF4248	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
PHALIAPI_03643	224308.BSU37410	3.44e-276	756.0	COG0612@1|root,COG0612@2|Bacteria	2|Bacteria	L	Peptidase, M16	-	-	2.7.1.26,2.7.7.2	ko:K07263,ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	Peptidase_M16_C
PHALIAPI_03644	224308.BSU37420	2.07e-260	717.0	COG0612@1|root,COG0612@2|Bacteria	2|Bacteria	L	Peptidase, M16	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
PHALIAPI_03646	224308.BSU37440	2.54e-303	830.0	COG3391@1|root,COG3391@2|Bacteria	2|Bacteria	CO	amine dehydrogenase activity	ywhL	-	-	-	-	-	-	-	-	-	-	-	Phosphoesterase
PHALIAPI_03647	224308.BSU37450	6e-278	765.0	COG3391@1|root,COG3391@2|Bacteria	2|Bacteria	CO	amine dehydrogenase activity	ywhK	-	-	-	-	-	-	-	-	-	-	-	Phosphoesterase
PHALIAPI_03648	326423.RBAM_019730	2.88e-100	309.0	COG0457@1|root,COG0457@2|Bacteria,1W0TS@1239|Firmicutes,4HZ05@91061|Bacilli,1ZCCQ@1386|Bacillus	91061|Bacilli	S	aspartate phosphatase	rapA1	-	-	ko:K06359,ko:K06361	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	-	-	TPR_12,TPR_8
PHALIAPI_03651	592026.GCWU0000282_002917	1.52e-14	79.3	2AIFZ@1|root,32WHS@2|Bacteria,1VBMM@1239|Firmicutes,25HS6@186801|Clostridia	186801|Clostridia	S	ABC-2 family transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03654	315730.BcerKBAB4_3979	4.26e-76	235.0	COG1131@1|root,COG1131@2|Bacteria,1V1P4@1239|Firmicutes,4HF4S@91061|Bacilli,1ZFTP@1386|Bacillus	91061|Bacilli	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
PHALIAPI_03656	224308.BSU37490	2.1e-215	593.0	COG0010@1|root,COG0010@2|Bacteria,1TP2A@1239|Firmicutes,4HA7S@91061|Bacilli,1ZB9A@1386|Bacillus	91061|Bacilli	E	Belongs to the arginase family	speB	-	3.5.3.11	ko:K01480	ko00330,ko01100,map00330,map01100	M00133	R01157	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
PHALIAPI_03657	224308.BSU37500	1.93e-204	565.0	COG0421@1|root,COG0421@2|Bacteria,1TPG5@1239|Firmicutes,4H9WU@91061|Bacilli,1ZB0B@1386|Bacillus	91061|Bacilli	E	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine	speE	GO:0003674,GO:0003824,GO:0004766,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576	2.5.1.16	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	M00034,M00133	R01920,R02869,R08359	RC00021,RC00053	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU37500	Spermine_synt_N,Spermine_synth
PHALIAPI_03658	224308.BSU37510	0.0	1365.0	COG0744@1|root,COG0744@2|Bacteria,1TPM5@1239|Firmicutes,4H9SA@91061|Bacilli,1ZBUK@1386|Bacillus	91061|Bacilli	M	penicillin-binding protein	pbpG	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.4.1.129,3.4.16.4	ko:K21464	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
PHALIAPI_03659	224308.BSU37520	1.92e-123	351.0	28J0N@1|root,2Z8XT@2|Bacteria,1V1UK@1239|Firmicutes,4HD4W@91061|Bacilli,1ZBQ1@1386|Bacillus	91061|Bacilli	S	YwhD family	ywhD	-	-	-	-	-	-	-	-	-	-	-	YwhD
PHALIAPI_03660	224308.BSU37530	3.29e-154	433.0	COG1994@1|root,COG1994@2|Bacteria,1V6D4@1239|Firmicutes,4HK6C@91061|Bacilli,1ZQYX@1386|Bacillus	91061|Bacilli	S	Peptidase family M50	ywhC	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M50
PHALIAPI_03661	1051501.AYTL01000028_gene2013	1.43e-35	120.0	COG1942@1|root,COG1942@2|Bacteria,1VKD5@1239|Firmicutes,4HRBS@91061|Bacilli,1ZITA@1386|Bacillus	91061|Bacilli	G	4-oxalocrotonate tautomerase	dmpI	GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0044237	5.3.2.6	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R03966,R05389	RC01040,RC01355	ko00000,ko00001,ko00002,ko01000	-	-	-	Tautomerase
PHALIAPI_03662	224308.BSU37550	1.45e-93	273.0	COG1846@1|root,COG1846@2|Bacteria,1VBX8@1239|Firmicutes,4HKR1@91061|Bacilli,1ZFE5@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ywhA	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_03663	224308.BSU37560	0.0	1271.0	COG0441@1|root,COG0441@2|Bacteria,1TP78@1239|Firmicutes,4HABZ@91061|Bacilli,1ZDCN@1386|Bacillus	91061|Bacilli	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)	thrS	GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
PHALIAPI_03665	224308.BSU37570	1.69e-297	816.0	COG0477@1|root,COG0477@2|Bacteria,1V2WI@1239|Firmicutes,4HGNH@91061|Bacilli,1ZMH9@1386|Bacillus	91061|Bacilli	U	Major Facilitator Superfamily	mmr	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K08166	-	-	-	-	ko00000,ko02000	2.A.1.3.10	-	-	MFS_1
PHALIAPI_03666	224308.BSU37580	6.36e-103	298.0	COG1959@1|root,COG1959@2|Bacteria,1V462@1239|Firmicutes,4HHBN@91061|Bacilli,1ZGU4@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yffB	-	-	-	-	-	-	-	-	-	-	-	Rrf2
PHALIAPI_03667	224308.BSU37590	1.47e-115	331.0	COG3465@1|root,COG3465@2|Bacteria,1V6Q4@1239|Firmicutes,4HHX3@91061|Bacilli,1ZFMJ@1386|Bacillus	91061|Bacilli	-	-	ywgA	-	-	ko:K09388	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_03668	224308.BSU37600	0.0	879.0	COG1078@1|root,COG1078@2|Bacteria,1TPVB@1239|Firmicutes,4HAX8@91061|Bacilli,1ZBRB@1386|Bacillus	91061|Bacilli	S	COG1078 HD superfamily phosphohydrolases	ywfO	GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576	-	ko:K06885	-	-	-	-	ko00000	-	-	-	HD
PHALIAPI_03669	224308.BSU37610	8.55e-49	155.0	COG4844@1|root,COG4844@2|Bacteria,1VB5Q@1239|Firmicutes,4HKJX@91061|Bacilli,1ZHXV@1386|Bacillus	91061|Bacilli	S	Belongs to the UPF0741 family	ywzC	-	-	-	-	-	-	-	-	-	-	-	DUF1450
PHALIAPI_03670	224308.BSU37620	5.39e-145	413.0	2A3YB@1|root,30SGP@2|Bacteria,1V3JK@1239|Firmicutes,4HHK1@91061|Bacilli,1ZQRD@1386|Bacillus	91061|Bacilli	-	-	rsfA_1	GO:0005575,GO:0005623,GO:0042763,GO:0044464	-	ko:K06314	-	-	-	-	ko00000,ko03000	-	-	-	Myb_DNA-bind_6
PHALIAPI_03671	224308.BSU37630	8.71e-202	560.0	COG0697@1|root,COG0697@2|Bacteria,1TQTG@1239|Firmicutes,4HCMU@91061|Bacilli,1ZCU5@1386|Bacillus	91061|Bacilli	EG	EamA-like transporter family	ywfM	-	-	ko:K03298	-	-	-	-	ko00000,ko02000	2.A.7.3	-	-	EamA
PHALIAPI_03672	224308.BSU37640	2.51e-198	550.0	COG0095@1|root,COG0095@2|Bacteria,1TQKA@1239|Firmicutes,4HCPS@91061|Bacilli,1ZCIA@1386|Bacillus	91061|Bacilli	H	Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes	lipL	GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576	2.3.1.200,2.3.1.204	ko:K16869,ko:K18821	-	-	-	-	ko00000,ko01000	-	-	-	BPL_LplA_LipB
PHALIAPI_03673	224308.BSU37650	3.73e-209	578.0	COG0583@1|root,COG0583@2|Bacteria,1TP6T@1239|Firmicutes,4HC4T@91061|Bacilli,1ZBIX@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	cysL	-	-	ko:K21900	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
PHALIAPI_03674	224308.BSU37660	3.37e-224	619.0	COG0280@1|root,COG0280@2|Bacteria,1TPQ0@1239|Firmicutes,4H9VH@91061|Bacilli,1ZC98@1386|Bacillus	91061|Bacilli	C	In Salmonella this enzyme is required for ethanolamine catabolism	pta	-	2.3.1.8,3.6.3.21	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00236,M00357,M00579	R00230,R00921	RC00004,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3	-	iSB619.SA_RS03155	PTA_PTB
PHALIAPI_03675	224308.BSU37670	8.08e-186	516.0	COG3253@1|root,COG3253@2|Bacteria,1TQB2@1239|Firmicutes,4H9YI@91061|Bacilli,1ZAZY@1386|Bacillus	91061|Bacilli	C	May function as heme-dependent peroxidase	ywfI	-	-	ko:K00435	ko00860,ko01100,ko01110,map00860,map01100,map01110	-	R11522	RC00884	ko00000,ko00001,ko01000	-	-	-	Chlor_dismutase
PHALIAPI_03676	224308.BSU37680	3.37e-176	492.0	COG1028@1|root,COG1028@2|Bacteria,1U2GS@1239|Firmicutes,4H9R9@91061|Bacilli,1ZBQ2@1386|Bacillus	91061|Bacilli	IQ	Enoyl-(Acyl carrier protein) reductase	ywfH	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016628,GO:0016999,GO:0017000,GO:0017144,GO:0036094,GO:0044237,GO:0044249,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363	-	ko:K19550	ko01130,map01130	M00787	R11067	RC03342	ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short_C2
PHALIAPI_03677	224308.BSU37690	1.74e-294	803.0	COG0436@1|root,COG0436@2|Bacteria,1TQD6@1239|Firmicutes,4HAHQ@91061|Bacilli,1ZEPP@1386|Bacillus	91061|Bacilli	E	Aminotransferase class I and II	ywfG	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009987,GO:0016740,GO:0016769,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249	-	ko:K08969,ko:K19549	ko00270,ko01100,ko01130,map00270,map01100,map01130	M00034,M00787	R07396,R11068	RC00006	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
PHALIAPI_03678	224308.BSU37700	2.63e-266	731.0	COG0477@1|root,COG2814@2|Bacteria,1UXP5@1239|Firmicutes,4HCSQ@91061|Bacilli,1ZF1Y@1386|Bacillus	91061|Bacilli	EGP	Part of the bacilysin biosynthesis operon. May be involved in self-resistance to bacilysin by permitting efflux of this antibiotic	bacE	-	-	ko:K19552	-	-	-	-	ko00000,ko02000	2.A.1.21.5	-	-	MFS_1,MFS_3
PHALIAPI_03679	224308.BSU37710	0.0	935.0	COG0151@1|root,COG0151@2|Bacteria,1VSXT@1239|Firmicutes,4HT21@91061|Bacilli	91061|Bacilli	F	Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)	bacD	-	6.3.2.49	ko:K13037	ko01130,map01130	M00787	R11064	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU37710	ATP-grasp_4
PHALIAPI_03680	224308.BSU37720	9.01e-178	495.0	COG1028@1|root,COG1028@2|Bacteria,1TR5M@1239|Firmicutes,4HCD2@91061|Bacilli,1ZEJ9@1386|Bacillus	91061|Bacilli	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	bacC	-	1.1.1.385	ko:K19548	ko01130,map01130	M00787	R10917	RC00154	ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short_C2
PHALIAPI_03681	224308.BSU37730	1.24e-175	488.0	COG1917@1|root,COG1917@2|Bacteria,1TXB2@1239|Firmicutes,4I68H@91061|Bacilli,1ZEIP@1386|Bacillus	91061|Bacilli	S	Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the	bacB	GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0016999,GO:0017000,GO:0017144,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0046872,GO:0046914,GO:0050897	5.3.3.19	ko:K19547	ko01130,map01130	M00787	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	Cupin_2
PHALIAPI_03682	224308.BSU37740	5.11e-146	411.0	COG0077@1|root,COG0077@2|Bacteria,1VY44@1239|Firmicutes,4HXPI@91061|Bacilli,1ZDG1@1386|Bacillus	91061|Bacilli	E	Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate	bacA	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249	4.1.1.100	ko:K19546	ko01130,map01130	M00787	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	-
PHALIAPI_03683	224308.BSU37750	6.3e-274	752.0	COG0477@1|root,COG2814@2|Bacteria,1V0Z5@1239|Firmicutes,4HW2N@91061|Bacilli,1ZCZ9@1386|Bacillus	91061|Bacilli	EGP	-transporter	ywfA	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
PHALIAPI_03684	224308.BSU37760	2.65e-316	863.0	COG0833@1|root,COG0833@2|Bacteria,1UHNR@1239|Firmicutes,4HUT7@91061|Bacilli,1ZB12@1386|Bacillus	91061|Bacilli	E	amino acid	rocC	GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016020,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901605	-	ko:K02205,ko:K16235,ko:K16236	-	-	-	-	ko00000,ko02000	2.A.3.1,2.A.3.1.10	-	iYO844.BSU39390	AA_permease
PHALIAPI_03685	224308.BSU37770	0.0	1147.0	COG4187@1|root,COG4187@2|Bacteria,1TQQ7@1239|Firmicutes,4HABT@91061|Bacilli,1ZCEE@1386|Bacillus	91061|Bacilli	E	arginine degradation protein	rocB	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M20
PHALIAPI_03686	224308.BSU37780	0.0	1014.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4HBS1@91061|Bacilli,1ZCI4@1386|Bacillus	91061|Bacilli	C	Belongs to the aldehyde dehydrogenase family. RocA subfamily	rocA	-	1.2.1.88	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	-	R00245,R00707,R00708,R04444,R04445,R05051	RC00080,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000	-	-	iYO844.BSU37780	Aldedh
PHALIAPI_03687	224308.BSU37790	3.78e-308	841.0	COG0334@1|root,COG0334@2|Bacteria,1TP45@1239|Firmicutes,4HAEI@91061|Bacilli,1ZAX4@1386|Bacillus	91061|Bacilli	E	Belongs to the Glu Leu Phe Val dehydrogenases family	rocG	GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0055114,GO:0071704,GO:1901564	1.4.1.2	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	-	R00243	RC00006,RC02799	ko00000,ko00001,ko01000	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
PHALIAPI_03688	224308.BSU37800	3.7e-101	293.0	2974U@1|root,2ZUCW@2|Bacteria,1W4BH@1239|Firmicutes,4I1IR@91061|Bacilli,1ZFDP@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03689	224308.BSU37810	3.07e-112	321.0	COG1898@1|root,COG1898@2|Bacteria,1V4G5@1239|Firmicutes,4HGWJ@91061|Bacilli,1ZFSW@1386|Bacillus	91061|Bacilli	M	Spore Coat	spsL	-	5.1.3.13	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R06514	RC01531	ko00000,ko00001,ko00002,ko01000	-	-	-	dTDP_sugar_isom
PHALIAPI_03690	224308.BSU37820	6.7e-204	564.0	COG1091@1|root,COG1091@2|Bacteria,1TP71@1239|Firmicutes,4HBXF@91061|Bacilli,1ZBZD@1386|Bacillus	91061|Bacilli	M	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose	rfbD	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	RmlD_sub_bind
PHALIAPI_03691	224308.BSU37830	2.5e-231	636.0	COG1088@1|root,COG1088@2|Bacteria,1TPWM@1239|Firmicutes,4HA3Y@91061|Bacilli,1ZBFX@1386|Bacillus	91061|Bacilli	M	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily	spsJ	-	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
PHALIAPI_03692	224308.BSU37840	7.45e-178	495.0	COG1209@1|root,COG1209@2|Bacteria,1V301@1239|Firmicutes,4H9R0@91061|Bacilli,1ZAWH@1386|Bacillus	91061|Bacilli	M	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis	spsI	-	2.7.7.24	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	M00793	R02328	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
PHALIAPI_03693	224308.BSU37850	1.06e-235	649.0	COG3980@1|root,COG3980@2|Bacteria,1U2ZW@1239|Firmicutes,4HDTP@91061|Bacilli,1ZDRP@1386|Bacillus	91061|Bacilli	M	Spore Coat	spsG	-	-	-	-	-	-	-	-	-	-	-	Glyco_tran_28_C
PHALIAPI_03694	224308.BSU37860	7.39e-166	464.0	COG1861@1|root,COG1861@2|Bacteria,1U4YD@1239|Firmicutes,4HE69@91061|Bacilli,1ZE65@1386|Bacillus	91061|Bacilli	M	Spore Coat	spsF	-	-	ko:K07257	-	-	-	-	ko00000	-	-	-	CTP_transf_3
PHALIAPI_03695	224308.BSU37870	1.95e-271	742.0	COG2089@1|root,COG2089@2|Bacteria,1TS09@1239|Firmicutes,4HA1Y@91061|Bacilli,1ZBZ4@1386|Bacillus	91061|Bacilli	M	acid synthase	pseI	-	2.5.1.56,2.5.1.97	ko:K01654,ko:K15898	ko00520,ko01100,map00520,map01100	-	R01804,R04435,R09841	RC00159	ko00000,ko00001,ko01000	-	-	-	NeuB,SAF
PHALIAPI_03696	224308.BSU37880	5.75e-208	575.0	COG0454@1|root,COG0456@2|Bacteria,1V4XR@1239|Firmicutes,4I182@91061|Bacilli,1ZET7@1386|Bacillus	91061|Bacilli	K	Spore Coat	spsD	GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234	2.3.1.210	ko:K16704	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1
PHALIAPI_03697	224308.BSU37890	1.85e-284	776.0	COG0399@1|root,COG0399@2|Bacteria,1TPDH@1239|Firmicutes,4HDN8@91061|Bacilli,1ZQW8@1386|Bacillus	91061|Bacilli	E	Belongs to the DegT DnrJ EryC1 family	spsC	-	2.6.1.102	ko:K13010	ko00520,map00520	-	R10460	RC00006,RC00781	ko00000,ko00001,ko01000,ko01005,ko01007	-	-	-	DegT_DnrJ_EryC1
PHALIAPI_03698	224308.BSU37900	0.0	914.0	COG1887@1|root,COG1887@2|Bacteria,1VVE5@1239|Firmicutes,4HWEM@91061|Bacilli,1ZE0J@1386|Bacillus	91061|Bacilli	M	Capsule polysaccharide biosynthesis protein	spsB	-	-	-	-	-	-	-	-	-	-	-	Capsule_synth,Glyphos_transf
PHALIAPI_03699	224308.BSU37910	2.71e-185	514.0	COG0463@1|root,COG0463@2|Bacteria,1VTPH@1239|Firmicutes,4HUD5@91061|Bacilli,1ZDZ5@1386|Bacillus	91061|Bacilli	M	Spore Coat	spsA	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
PHALIAPI_03700	224308.BSU37920	3.62e-112	323.0	2CWP1@1|root,32T03@2|Bacteria,1VAD2@1239|Firmicutes,4HKGQ@91061|Bacilli,1ZH2J@1386|Bacillus	91061|Bacilli	S	Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA	gerQ	GO:0005575,GO:0005618,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0018149,GO:0018153,GO:0018193,GO:0018199,GO:0018205,GO:0018262,GO:0019538,GO:0030312,GO:0031160,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901564	-	ko:K06305	-	-	-	-	ko00000	-	-	-	Spore_GerQ
PHALIAPI_03701	224308.BSU37930	1.59e-78	234.0	COG2363@1|root,COG2363@2|Bacteria,1VA79@1239|Firmicutes,4HKHG@91061|Bacilli,1ZGYJ@1386|Bacillus	91061|Bacilli	S	small membrane protein	ywdK	-	-	-	-	-	-	-	-	-	-	-	DUF423
PHALIAPI_03702	224308.BSU37940	7.57e-303	827.0	COG2233@1|root,COG2233@2|Bacteria,1TQ0A@1239|Firmicutes,4HA6X@91061|Bacilli,1ZD5W@1386|Bacillus	91061|Bacilli	F	Xanthine uracil	ywdJ	GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823	-	-	-	-	-	-	-	-	-	-	Xan_ur_permease
PHALIAPI_03703	224308.BSU37950	4.4e-63	193.0	2DRJS@1|root,33C32@2|Bacteria,1VPJY@1239|Firmicutes,4HRSY@91061|Bacilli,1ZHM5@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5327)	ywdI	-	-	-	-	-	-	-	-	-	-	-	DUF5327
PHALIAPI_03704	224308.BSU37960	0.0	898.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4HB97@91061|Bacilli,1ZBGZ@1386|Bacillus	91061|Bacilli	C	Belongs to the aldehyde dehydrogenase family	ywdH	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
PHALIAPI_03705	224308.BSU37970	2.71e-165	461.0	COG0692@1|root,COG0692@2|Bacteria,1TPSN@1239|Firmicutes,4HBTR@91061|Bacilli,1ZBCY@1386|Bacillus	91061|Bacilli	L	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine	ung	GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360	3.2.2.27	ko:K03648	ko03410,ko05340,map03410,map05340	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
PHALIAPI_03706	224308.BSU37980	1.1e-190	529.0	COG1216@1|root,COG1216@2|Bacteria,1TP40@1239|Firmicutes,4HDDN@91061|Bacilli,1ZE37@1386|Bacillus	91061|Bacilli	S	Glycosyltransferase like family 2	ywdF	GO:0003674,GO:0003824,GO:0016740,GO:0016757	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
PHALIAPI_03707	224308.BSU38020	2.21e-187	521.0	COG0351@1|root,COG0351@2|Bacteria,1TQ4A@1239|Firmicutes,4H9PP@91061|Bacilli,1ZQ7W@1386|Bacillus	91061|Bacilli	H	Phosphomethylpyrimidine kinase	pdxK	-	2.7.1.35,2.7.1.49,2.7.4.7	ko:K00868,ko:K00941	ko00730,ko00750,ko01100,map00730,map00750,map01100	M00127	R00174,R01909,R02493,R03471,R04509	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Phos_pyr_kin
PHALIAPI_03708	720555.BATR1942_16905	6.19e-39	130.0	2CEZ0@1|root,307S6@2|Bacteria,1U24I@1239|Firmicutes,4IBN7@91061|Bacilli,1ZH61@1386|Bacillus	91061|Bacilli	-	-	ywdA	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03709	224308.BSU38040	0.0	991.0	COG1621@1|root,COG1621@2|Bacteria,1TPAE@1239|Firmicutes,4H9Y7@91061|Bacilli,1ZCBA@1386|Bacillus	91061|Bacilli	G	invertase	sacA	-	3.2.1.26	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00801,R00802,R02410,R03635,R03921,R06088	RC00028,RC00077	ko00000,ko00001,ko01000	-	GH32	iYO844.BSU38040	Glyco_hydro_32C,Glyco_hydro_32N
PHALIAPI_03710	224308.BSU38050	0.0	883.0	COG1263@1|root,COG1264@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,1TP5X@1239|Firmicutes,4HA0I@91061|Bacilli,1ZB5X@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	sacP	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563	2.7.1.211	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	M00269	R00811	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.2.1,4.A.1.2.10,4.A.1.2.12,4.A.1.2.9	-	iYO844.BSU38050	PTS_EIIB,PTS_EIIC
PHALIAPI_03711	224308.BSU38060	3.95e-51	169.0	COG2116@1|root,COG2116@2|Bacteria,1TRTT@1239|Firmicutes,4HC15@91061|Bacilli,1ZDNX@1386|Bacillus	91061|Bacilli	P	Formate/nitrite transporter	-	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015112,GO:0015291,GO:0015318,GO:0015513,GO:0015698,GO:0015706,GO:0015707,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071705,GO:0071944,GO:0098656	-	ko:K02598	-	-	-	-	ko00000,ko02000	1.A.16.3	-	-	Form_Nir_trans
PHALIAPI_03712	224308.BSU38070	1.29e-193	537.0	COG3711@1|root,COG3711@2|Bacteria,1TT5A@1239|Firmicutes,4HC5Y@91061|Bacilli,1ZDB0@1386|Bacillus	91061|Bacilli	K	transcriptional antiterminator	sacT	-	-	ko:K03488	-	-	-	-	ko00000,ko03000	-	-	-	CAT_RBD,PRD
PHALIAPI_03714	224308.BSU38090	0.0	1541.0	COG1404@1|root,COG1404@2|Bacteria,1TPH1@1239|Firmicutes,4HBQH@91061|Bacilli,1ZBS0@1386|Bacillus	91061|Bacilli	O	Belongs to the peptidase S8 family	prtS	GO:0005575,GO:0005576	3.4.21.110,3.4.21.96	ko:K01361,ko:K08652,ko:K14647	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000,ko01002,ko03110	-	-	-	FIVAR,FlgD_ig,Gram_pos_anchor,Inhibitor_I9,PA,Peptidase_S8,YSIRK_signal,fn3_5
PHALIAPI_03715	224308.BSU38100	3.3e-236	650.0	COG2141@1|root,COG2141@2|Bacteria,1TPRS@1239|Firmicutes,4H9R2@91061|Bacilli,1ZB1E@1386|Bacillus	91061|Bacilli	C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	ywcH	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
PHALIAPI_03716	224308.BSU38110	3.15e-176	491.0	COG0778@1|root,COG0778@2|Bacteria,1UB8S@1239|Firmicutes,4HEGP@91061|Bacilli,1ZBQ3@1386|Bacillus	91061|Bacilli	C	Oxidoreductase	nfrA1	-	1.5.1.38	ko:K19285	ko00740,ko01100,map00740,map01100	-	R05706	RC00126	ko00000,ko00001,ko01000	-	-	-	Nitroreductase
PHALIAPI_03717	224308.BSU38120	1.26e-268	737.0	COG0772@1|root,COG0772@2|Bacteria,1TPGH@1239|Firmicutes,4HAV4@91061|Bacilli,1ZBSB@1386|Bacillus	91061|Bacilli	D	Belongs to the SEDS family	rodA	-	-	ko:K05837	-	-	-	-	ko00000,ko03036	-	-	-	FTSW_RODA_SPOVE
PHALIAPI_03718	1051501.AYTL01000028_gene1953	6.61e-52	164.0	2EPRF@1|root,33HBX@2|Bacteria,1VP6R@1239|Firmicutes,4HRWK@91061|Bacilli,1ZIF1@1386|Bacillus	91061|Bacilli	S	Required for proper spore morphogenesis. Important for spore germination	ywcE	GO:0008150,GO:0009847,GO:0032502	-	-	-	-	-	-	-	-	-	-	YwcE
PHALIAPI_03719	224308.BSU38140	1.58e-83	246.0	COG3125@1|root,COG3125@2|Bacteria,1VFT1@1239|Firmicutes,4HQ12@91061|Bacilli,1ZJ46@1386|Bacillus	91061|Bacilli	C	quinol oxidase, subunit	qoxD	GO:0003674,GO:0003824,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016679,GO:0016682,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564	1.10.3.12	ko:K02829	ko00190,ko01100,map00190,map01100	M00416	R09492	RC00819	ko00000,ko00001,ko00002,ko01000	-	-	-	COX4_pro
PHALIAPI_03720	1051501.AYTL01000028_gene1951	9.9e-144	405.0	COG1845@1|root,COG1845@2|Bacteria,1TQJ1@1239|Firmicutes,4HCWH@91061|Bacilli,1ZDEX@1386|Bacillus	91061|Bacilli	C	quinol oxidase, subunit	qoxC	GO:0003674,GO:0003824,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016679,GO:0016682,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564	1.10.3.12	ko:K02828	ko00190,ko01100,map00190,map01100	M00416	R09492	RC00819	ko00000,ko00001,ko00002,ko01000	-	-	-	COX3
PHALIAPI_03721	224308.BSU38160	0.0	1305.0	COG0843@1|root,COG0843@2|Bacteria,1TP2U@1239|Firmicutes,4HA4X@91061|Bacilli,1ZBD5@1386|Bacillus	91061|Bacilli	C	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B	qoxB	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009486,GO:0009987,GO:0015002,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016679,GO:0016682,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0034220,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0098655,GO:0098660,GO:0098662,GO:1901135,GO:1901360,GO:1901564,GO:1902600	1.10.3.12	ko:K02827	ko00190,ko01100,map00190,map01100	M00416	R09492	RC00819	ko00000,ko00001,ko00002,ko01000	3.D.4.1	-	-	COX1
PHALIAPI_03722	224308.BSU38170	6.94e-226	623.0	COG1622@1|root,COG1622@2|Bacteria,1TPF6@1239|Firmicutes,4HA9J@91061|Bacilli,1ZB28@1386|Bacillus	91061|Bacilli	C	Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I	qoxA	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016679,GO:0016682,GO:0017144,GO:0019637,GO:0019693,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1902600	1.10.3.12	ko:K02826	ko00190,ko01100,map00190,map01100	M00416	R09492	RC00819	ko00000,ko00001,ko00002,ko01000	3.D.4.1	-	iSB619.SA_RS05175	COX2,COX2_TM
PHALIAPI_03723	224308.BSU38180	5.11e-49	156.0	COG2261@1|root,COG2261@2|Bacteria,1VENK@1239|Firmicutes,4HNKV@91061|Bacilli,1ZJBG@1386|Bacillus	91061|Bacilli	S	membrane	ydaS	-	-	-	-	-	-	-	-	-	-	-	Transgly_assoc
PHALIAPI_03724	224308.BSU38190	0.0	1037.0	COG4468@1|root,COG4468@2|Bacteria,1TPBN@1239|Firmicutes,4HAYJ@91061|Bacilli,1ZAVT@1386|Bacillus	91061|Bacilli	G	UDP-glucose--hexose-1-phosphate uridylyltransferase	galT	-	2.7.7.12	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	M00362,M00554,M00632	R00955	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	GalP_UDP_tr_C,GalP_UDP_transf
PHALIAPI_03725	224308.BSU38200	1.08e-288	787.0	COG0153@1|root,COG0153@2|Bacteria,1TPD0@1239|Firmicutes,4HARP@91061|Bacilli,1ZC9P@1386|Bacillus	91061|Bacilli	G	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)	galK	GO:0005975,GO:0005996,GO:0006012,GO:0008150,GO:0008152,GO:0019318,GO:0044238,GO:0044281,GO:0071704	2.7.1.6	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00554,M00632	R01092	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg
PHALIAPI_03726	224308.BSU38210	3.33e-77	231.0	COG2246@1|root,COG2246@2|Bacteria,1VESW@1239|Firmicutes,4HNK7@91061|Bacilli,1ZG2Y@1386|Bacillus	91061|Bacilli	S	GtrA-like protein	gtcA	-	-	-	-	-	-	-	-	-	-	-	GtrA
PHALIAPI_03727	224308.BSU38220	1.19e-158	444.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	ywcC	-	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_03729	224308.BSU38230	2.13e-64	196.0	COG3162@1|root,COG3162@2|Bacteria,1VAEW@1239|Firmicutes,4HM0S@91061|Bacilli,1ZHX2@1386|Bacillus	91061|Bacilli	S	Protein of unknown function, DUF485	ywcB	-	-	-	-	-	-	-	-	-	-	-	DUF485
PHALIAPI_03730	224308.BSU38240	0.0	924.0	COG4147@1|root,COG4147@2|Bacteria,1UHT5@1239|Firmicutes,4HCF6@91061|Bacilli,1ZCX7@1386|Bacillus	91061|Bacilli	S	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	ywcA	-	-	ko:K14393	-	-	-	-	ko00000,ko02000	2.A.21.7	-	-	SSF
PHALIAPI_03731	224308.BSU38250	3.25e-144	406.0	COG2761@1|root,COG2761@2|Bacteria,1TZ1N@1239|Firmicutes,4HEBF@91061|Bacilli,1ZD4M@1386|Bacillus	91061|Bacilli	Q	dithiol-disulfide isomerase involved in polyketide biosynthesis	ywbO	-	-	-	-	-	-	-	-	-	-	-	DSBA
PHALIAPI_03732	224308.BSU38260	8.87e-308	838.0	COG2837@1|root,COG2837@2|Bacteria,1UY9Y@1239|Firmicutes,4HACQ@91061|Bacilli,1ZEAD@1386|Bacillus	91061|Bacilli	P	Dyp-type peroxidase family protein	ywbN	GO:0005575,GO:0005576	-	ko:K07223,ko:K16301	-	-	-	-	ko00000,ko01000,ko02000	2.A.108.2.3	-	iYO844.BSU38260	Dyp_perox,TAT_signal
PHALIAPI_03733	224308.BSU38270	9.83e-246	678.0	COG2822@1|root,COG2822@2|Bacteria,1TS89@1239|Firmicutes,4HB0W@91061|Bacilli,1ZC6N@1386|Bacillus	91061|Bacilli	P	periplasmic lipoprotein involved in iron transport	ycdO	GO:0000041,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0008150,GO:0015684,GO:0030001,GO:0051179,GO:0051234,GO:0070838,GO:0072511	-	ko:K07224	-	-	-	-	ko00000,ko02000	2.A.108.2.3	-	-	Peptidase_M75
PHALIAPI_03734	224308.BSU38280	0.0	870.0	COG0672@1|root,COG0672@2|Bacteria,1TQIA@1239|Firmicutes,4HCJZ@91061|Bacilli,1ZDYA@1386|Bacillus	91061|Bacilli	P	COG0672 High-affinity Fe2 Pb2 permease	-	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K07243	-	-	-	-	ko00000,ko02000	2.A.108.1,2.A.108.2	-	-	FTR1
PHALIAPI_03735	224308.BSU38290	6.32e-149	420.0	COG0352@1|root,COG0352@2|Bacteria,1V3ZR@1239|Firmicutes,4HH1E@91061|Bacilli,1ZFNE@1386|Bacillus	91061|Bacilli	H	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)	thiE	GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.3	ko:K00788	ko00730,ko01100,map00730,map01100	M00127	R03223,R10712	RC00224,RC03255,RC03397	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU38290	TMP-TENI
PHALIAPI_03736	224308.BSU38300	5.39e-184	513.0	COG2145@1|root,COG2145@2|Bacteria,1V1R6@1239|Firmicutes,4HFTJ@91061|Bacilli,1ZAX2@1386|Bacillus	91061|Bacilli	H	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)	thiM	GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008972,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.50	ko:K00878	ko00730,ko01100,map00730,map01100	M00127	R04448	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	HK
PHALIAPI_03737	224308.BSU38310	6.36e-202	560.0	COG0583@1|root,COG0583@2|Bacteria,1TQ6Y@1239|Firmicutes,4HB94@91061|Bacilli,1ZBXV@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ywbI	GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363,GO:1990837	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
PHALIAPI_03738	1051501.AYTL01000028_gene1932	1.28e-75	227.0	COG1380@1|root,COG1380@2|Bacteria,1VEN4@1239|Firmicutes,4HNKZ@91061|Bacilli,1ZGVJ@1386|Bacillus	91061|Bacilli	S	Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a	ywbH	-	-	ko:K06518	-	-	-	-	ko00000,ko02000	1.E.14.2	-	-	LrgA
PHALIAPI_03739	224308.BSU38330	1.21e-143	407.0	COG1346@1|root,COG1346@2|Bacteria,1TRGN@1239|Firmicutes,4HF0M@91061|Bacilli,1ZFQ6@1386|Bacillus	91061|Bacilli	M	effector of murein hydrolase	ywbG	-	-	-	-	-	-	-	-	-	-	-	LrgB
PHALIAPI_03740	224308.BSU38340	1.44e-275	755.0	COG0477@1|root,COG2814@2|Bacteria,1TS3C@1239|Firmicutes,4HC3B@91061|Bacilli,1ZS79@1386|Bacillus	91061|Bacilli	EGP	Nucleoside H+ symporter	ywbF	-	-	ko:K05820	-	-	-	-	ko00000,ko02000	2.A.1.27	-	-	MFS_1_like
PHALIAPI_03741	1051501.AYTL01000028_gene1929	6.33e-38	127.0	COG4895@1|root,COG4895@2|Bacteria,1VEG3@1239|Firmicutes,4HNJA@91061|Bacilli,1ZIX5@1386|Bacillus	91061|Bacilli	S	Uncharacterized conserved protein (DUF2196)	ywbE	-	-	-	-	-	-	-	-	-	-	-	DUF2196
PHALIAPI_03742	224308.BSU38360	1.4e-280	767.0	COG1092@1|root,COG1092@2|Bacteria,1TRAJ@1239|Firmicutes,4HAA1@91061|Bacilli,1ZBVG@1386|Bacillus	91061|Bacilli	J	Methyltransferase	ywbD	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
PHALIAPI_03743	224308.BSU38370	1.15e-86	254.0	COG0346@1|root,COG0346@2|Bacteria,1V7GY@1239|Firmicutes,4HIYA@91061|Bacilli,1ZH3E@1386|Bacillus	91061|Bacilli	E	glyoxalase	ywbC	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase,Glyoxalase_4
PHALIAPI_03744	224308.BSU38380	1.33e-156	439.0	29A5D@1|root,2ZX6E@2|Bacteria,1W34Q@1239|Firmicutes,4I1DM@91061|Bacilli,1ZMSX@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2711)	ywbB	-	-	-	-	-	-	-	-	-	-	-	DUF2711
PHALIAPI_03745	224308.BSU38390	1.06e-311	850.0	COG1455@1|root,COG1455@2|Bacteria,1TP8D@1239|Firmicutes,4H9W2@91061|Bacilli,1ZBJ7@1386|Bacillus	91061|Bacilli	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane	licC	-	-	ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2	-	iYO844.BSU38390	PTS_EIIC
PHALIAPI_03746	224308.BSU38400	0.0	995.0	COG1404@1|root,COG1404@2|Bacteria,1TQ2M@1239|Firmicutes,4HBYC@91061|Bacilli,1ZPV5@1386|Bacillus	91061|Bacilli	O	Belongs to the peptidase S8 family	epr	GO:0005575,GO:0005576	3.4.21.62	ko:K01342,ko:K13277	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000,ko01002,ko03110	-	-	-	Peptidase_S8,SLH,fn3
PHALIAPI_03747	224308.BSU38410	4.15e-312	852.0	COG1263@1|root,COG1264@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,1TP5X@1239|Firmicutes,4HA0I@91061|Bacilli,1ZB5X@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	sacX	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563	2.7.1.211	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	M00269	R00811	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.2.1,4.A.1.2.10,4.A.1.2.12,4.A.1.2.9	-	iYO844.BSU38050	PTS_EIIB,PTS_EIIC
PHALIAPI_03748	224308.BSU38420	9.07e-196	543.0	COG3711@1|root,COG3711@2|Bacteria,1TT5A@1239|Firmicutes,4HC5Y@91061|Bacilli,1ZDB0@1386|Bacillus	91061|Bacilli	K	transcriptional antiterminator	sacT	-	-	ko:K03488	-	-	-	-	ko00000,ko03000	-	-	-	CAT_RBD,PRD
PHALIAPI_03749	224308.BSU38430	4.74e-210	580.0	COG1442@1|root,COG1442@2|Bacteria,1V2FM@1239|Firmicutes,4HFSG@91061|Bacilli,1ZCME@1386|Bacillus	91061|Bacilli	M	General stress	gspA	GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0016051,GO:0016740,GO:0016757,GO:0043170,GO:0044238,GO:0071704,GO:1901576	-	-	-	-	-	-	-	-	-	-	Glyco_transf_8
PHALIAPI_03750	224308.BSU38440	1.04e-159	448.0	COG5522@1|root,COG5522@2|Bacteria,1V4XE@1239|Firmicutes,4HHC6@91061|Bacilli,1ZBDN@1386|Bacillus	91061|Bacilli	S	Integral membrane protein	ywaF	-	-	-	-	-	-	-	-	-	-	-	Intg_mem_TP0381
PHALIAPI_03751	224308.BSU38450	5.08e-114	327.0	COG1846@1|root,COG1846@2|Bacteria,1VM7T@1239|Firmicutes,4I35C@91061|Bacilli,1ZGG4@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ywaE	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_03752	224308.BSU38460	3.53e-294	803.0	COG0162@1|root,COG0162@2|Bacteria,1TPGN@1239|Firmicutes,4H9YV@91061|Bacilli,1ZBY9@1386|Bacillus	91061|Bacilli	J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)	tyrS	GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564	6.1.1.1	ko:K01866	ko00970,map00970	M00359,M00360	R02918	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	S4,tRNA-synt_1b
PHALIAPI_03753	224308.BSU38470	1.83e-313	855.0	COG2234@1|root,COG2234@2|Bacteria,1UFM1@1239|Firmicutes,4HBE5@91061|Bacilli,1ZC0A@1386|Bacillus	91061|Bacilli	S	PA domain	ywaD	-	3.4.11.10,3.4.11.6	ko:K19701	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PA,Peptidase_M28
PHALIAPI_03754	224308.BSU38480	5.94e-148	416.0	COG2357@1|root,COG2357@2|Bacteria,1TSC9@1239|Firmicutes,4HBE0@91061|Bacilli,1ZB8W@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	ywaC	GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657	2.7.6.5	ko:K00951,ko:K07816	ko00230,map00230	-	R00429	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	RelA_SpoT
PHALIAPI_03755	224308.BSU38490	5.7e-210	582.0	COG1575@1|root,COG1575@2|Bacteria,1TSZV@1239|Firmicutes,4HA68@91061|Bacilli,1ZB6F@1386|Bacillus	91061|Bacilli	H	Belongs to the MenA family. Type 1 subfamily	menA	GO:0003674,GO:0003824,GO:0004659,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663	2.5.1.74	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R05617,R06858,R10757	RC02935,RC02936,RC03264	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
PHALIAPI_03756	720555.BATR1942_17205	3.6e-22	87.8	2DF9X@1|root,2ZR1C@2|Bacteria,1W521@1239|Firmicutes,4I1M8@91061|Bacilli,1ZJJ4@1386|Bacillus	91061|Bacilli	S	D-Ala-teichoic acid biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF3687
PHALIAPI_03757	224308.BSU38500	0.0	1006.0	COG1020@1|root,COG1020@2|Bacteria,1TPTH@1239|Firmicutes,4HAHU@91061|Bacilli,1ZB3S@1386|Bacillus	91061|Bacilli	Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	dltA	GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016208,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0022857,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0051179,GO:0051234,GO:0055085,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.1.1.13	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	M00725	R02718	RC00037,RC00094	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	AMP-binding,AMP-binding_C
PHALIAPI_03758	224308.BSU38510	1.14e-297	810.0	COG1696@1|root,COG1696@2|Bacteria,1TP52@1239|Firmicutes,4HBQG@91061|Bacilli,1ZCX1@1386|Bacillus	91061|Bacilli	M	membrane protein involved in D-alanine export	dltB	-	-	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	M00725	-	-	ko00000,ko00001,ko00002,ko01504	-	-	-	MBOAT
PHALIAPI_03759	1051501.AYTL01000028_gene1911	6.83e-50	158.0	COG0236@1|root,COG0236@2|Bacteria,1VFQI@1239|Firmicutes,4HNIH@91061|Bacilli,1ZJEB@1386|Bacillus	91061|Bacilli	IQ	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall	dltC	GO:0000270,GO:0003674,GO:0005215,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0022857,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0051179,GO:0051234,GO:0055085,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	6.1.1.13	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	M00725	R02718	RC00037,RC00094	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	PP-binding
PHALIAPI_03760	224308.BSU38530	4.09e-294	801.0	COG3966@1|root,COG3966@2|Bacteria,1TSZU@1239|Firmicutes,4HC3H@91061|Bacilli,1ZD6Q@1386|Bacillus	91061|Bacilli	M	COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)	dltD	-	-	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	M00725	-	-	ko00000,ko00001,ko00002,ko01504	-	-	-	DltD
PHALIAPI_03761	224308.BSU38540	2.39e-177	494.0	COG3967@1|root,COG3967@2|Bacteria,1TT89@1239|Firmicutes,4HC2F@91061|Bacilli,1ZBB6@1386|Bacillus	91061|Bacilli	M	Belongs to the short-chain dehydrogenases reductases (SDR) family	dltE	-	-	ko:K14189	-	-	-	-	ko00000,ko01000	-	-	-	adh_short
PHALIAPI_03762	224308.BSU38550	4.36e-263	720.0	COG0115@1|root,COG0115@2|Bacteria,1TQQI@1239|Firmicutes,4HASX@91061|Bacilli,1ZBFM@1386|Bacillus	91061|Bacilli	E	Branched-chain amino acid aminotransferase	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	iYO844.BSU38550	Aminotran_4
PHALIAPI_03763	224308.BSU38560	0.0	876.0	COG1486@1|root,COG1486@2|Bacteria,1TQ9I@1239|Firmicutes,4H9Z4@91061|Bacilli,1ZC6U@1386|Bacillus	91061|Bacilli	G	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases	licH	-	3.2.1.86	ko:K01222	ko00010,ko00500,map00010,map00500	-	R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000	-	GT4	-	Glyco_hydro_4,Glyco_hydro_4C
PHALIAPI_03764	224308.BSU38570	1.58e-50	161.0	COG1447@1|root,COG1447@2|Bacteria,1VEGE@1239|Firmicutes,4HM37@91061|Bacilli,1ZI2Z@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	licA	-	2.7.1.196,2.7.1.205	ko:K02759	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.3.2	-	iYO844.BSU38570	PTS_IIA
PHALIAPI_03765	224308.BSU38580	0.0	870.0	COG1455@1|root,COG1455@2|Bacteria,1TP8D@1239|Firmicutes,4H9W2@91061|Bacilli,1ZBJ7@1386|Bacillus	91061|Bacilli	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane	licC	-	-	ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2	-	iYO844.BSU38390	PTS_EIIC
PHALIAPI_03766	224308.BSU38590	1.89e-67	204.0	COG1440@1|root,COG1440@2|Bacteria,1VADE@1239|Firmicutes,4HM5Q@91061|Bacilli,1ZIC3@1386|Bacillus	91061|Bacilli	G	transporter subunit IIB	licB	-	2.7.1.196,2.7.1.205	ko:K02760	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.3.2	-	-	PTS_IIB
PHALIAPI_03767	224308.BSU38600	0.0	1229.0	COG1762@1|root,COG3711@1|root,COG1762@2|Bacteria,COG3711@2|Bacteria,1TQT1@1239|Firmicutes,4HEIQ@91061|Bacilli,1ZQ0I@1386|Bacillus	91061|Bacilli	GKT	Mga helix-turn-helix domain	licR	-	-	ko:K03491	-	-	-	-	ko00000,ko03000	-	-	-	HTH_11,Mga,PRD,PTS_EIIA_2,PTS_IIB
PHALIAPI_03768	224308.BSU38610	8.94e-28	100.0	2BT1W@1|root,32N67@2|Bacteria,1UB79@1239|Firmicutes,4IMJZ@91061|Bacilli,1ZKBI@1386|Bacillus	91061|Bacilli	-	-	yxzF	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03769	224308.BSU38620	3.23e-145	408.0	COG2094@1|root,COG2094@2|Bacteria,1V1E6@1239|Firmicutes,4HG5E@91061|Bacilli,1ZFWT@1386|Bacillus	91061|Bacilli	L	Belongs to the DNA glycosylase MPG family	yxlJ	GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	3.2.2.21	ko:K03652	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Pur_DNA_glyco
PHALIAPI_03770	224308.BSU38630	0.0	1126.0	COG0753@1|root,COG0753@2|Bacteria,1TPPV@1239|Firmicutes,4H9XQ@91061|Bacilli,1ZB44@1386|Bacillus	91061|Bacilli	P	serves to protect cells from the toxic effects of hydrogen peroxide	katX	GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070887,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1990748	1.11.1.6	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	M00532	R00009,R00602,R02670	RC00034,RC00767,RC02141,RC02755	ko00000,ko00001,ko00002,ko01000	-	-	-	Catalase,Catalase-rel
PHALIAPI_03771	224308.BSU38640	2.77e-271	744.0	COG0477@1|root,COG2814@2|Bacteria,1TWWZ@1239|Firmicutes,4HEV3@91061|Bacilli,1ZCPX@1386|Bacillus	91061|Bacilli	EGP	Major Facilitator Superfamily	yxlH	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
PHALIAPI_03772	224308.BSU38650	1.61e-178	498.0	COG1277@1|root,COG1277@2|Bacteria,1UYUR@1239|Firmicutes,4HEAP@91061|Bacilli,1ZCZZ@1386|Bacillus	91061|Bacilli	S	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component	yxlG	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC2_membrane_5
PHALIAPI_03773	224308.BSU38660	1.11e-208	577.0	COG1131@1|root,COG1131@2|Bacteria,1TQEV@1239|Firmicutes,4HBHF@91061|Bacilli,1ZBR2@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	yxlF	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran,DUF4162
PHALIAPI_03774	224308.BSU38670	2.17e-39	130.0	2DPPC@1|root,332VC@2|Bacteria,1VM0N@1239|Firmicutes,4HNHT@91061|Bacilli,1ZIVE@1386|Bacillus	91061|Bacilli	S	Phospholipase_D-nuclease N-terminal	yxlE	-	-	-	-	-	-	-	-	-	-	-	PLDc_N
PHALIAPI_03775	224308.BSU38680	5.89e-42	137.0	2DJGR@1|root,3062I@2|Bacteria,1TZ34@1239|Firmicutes,4HZY3@91061|Bacilli,1ZK0K@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03776	224308.BSU38690	2.73e-53	169.0	295E2@1|root,2ZSRV@2|Bacteria,1W5NR@1239|Firmicutes,4I1KQ@91061|Bacilli,1ZJPN@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5345)	yxlC	-	-	-	-	-	-	-	-	-	-	-	DUF5345
PHALIAPI_03777	224308.BSU38700	2.14e-123	352.0	COG1595@1|root,COG1595@2|Bacteria,1VB37@1239|Firmicutes,4HMZ2@91061|Bacilli,1ZCWY@1386|Bacillus	91061|Bacilli	K	Belongs to the sigma-70 factor family. ECF subfamily	sigY	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
PHALIAPI_03778	224308.BSU38710	0.0	880.0	COG1457@1|root,COG1457@2|Bacteria,1V5JP@1239|Firmicutes,4HIHK@91061|Bacilli,1ZCP8@1386|Bacillus	91061|Bacilli	F	Belongs to the purine-cytosine permease (2.A.39) family	yxlA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03457	-	-	-	-	ko00000	2.A.39	-	iYO844.BSU38710	Transp_cyt_pur
PHALIAPI_03779	224308.BSU38720	1.15e-196	545.0	COG0063@1|root,COG0063@2|Bacteria,1TNZE@1239|Firmicutes,4HBZC@91061|Bacilli,1ZAP7@1386|Bacillus	91061|Bacilli	G	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration	nnrD	-	4.2.1.136,5.1.99.6	ko:K17758,ko:K17759	-	-	-	-	ko00000,ko01000	-	-	-	Carb_kinase,YjeF_N
PHALIAPI_03780	224308.BSU38730	0.0	1073.0	COG4987@1|root,COG4987@2|Bacteria,1UHN5@1239|Firmicutes,4HAAB@91061|Bacilli,1ZCKI@1386|Bacillus	91061|Bacilli	V	ATP-binding protein	cydD	-	-	ko:K16012	ko02010,map02010	-	-	-	ko00000,ko00001,ko02000	3.A.1.129	-	-	ABC_membrane,ABC_tran
PHALIAPI_03781	224308.BSU38740	0.0	1043.0	COG4988@1|root,COG4988@2|Bacteria,1TQ1P@1239|Firmicutes,4HAN0@91061|Bacilli,1ZB86@1386|Bacillus	91061|Bacilli	V	ATP-binding	cydC	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702	-	ko:K16013	ko02010,map02010	-	-	-	ko00000,ko00001,ko02000	3.A.1.129	-	-	ABC_membrane,ABC_tran
PHALIAPI_03782	224308.BSU38750	1.77e-238	656.0	COG1294@1|root,COG1294@2|Bacteria,1TRYV@1239|Firmicutes,4H9KF@91061|Bacilli,1ZDGQ@1386|Bacillus	91061|Bacilli	C	Cytochrome d ubiquinol oxidase, subunit II	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	iYO844.BSU38750	Cyt_bd_oxida_II
PHALIAPI_03783	224308.BSU38760	0.0	930.0	COG1271@1|root,COG1271@2|Bacteria,1TRH4@1239|Firmicutes,4HA19@91061|Bacilli,1ZBAG@1386|Bacillus	91061|Bacilli	C	oxidase, subunit	cydA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
PHALIAPI_03784	224308.BSU38770	5.64e-310	846.0	COG3493@1|root,COG3493@2|Bacteria,1TR97@1239|Firmicutes,4HBS8@91061|Bacilli,1ZC12@1386|Bacillus	91061|Bacilli	C	COG3493 Na citrate symporter	cimH	-	-	-	-	-	-	-	-	-	-	-	2HCT
PHALIAPI_03785	224308.BSU38780	0.0	1063.0	COG0501@1|root,COG0501@2|Bacteria,1U88Z@1239|Firmicutes,4HF3W@91061|Bacilli,1ZQAN@1386|Bacillus	91061|Bacilli	O	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
PHALIAPI_03787	224308.BSU38800	1.3e-199	553.0	COG0726@1|root,COG0726@2|Bacteria,1V6AW@1239|Firmicutes,4HHC9@91061|Bacilli,1ZQ8K@1386|Bacillus	91061|Bacilli	G	Polysaccharide deacetylase	yxkH	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1,SLAP
PHALIAPI_03788	224308.BSU38810	3.44e-261	716.0	COG3842@1|root,COG3842@2|Bacteria,1TP2M@1239|Firmicutes,4HAMQ@91061|Bacilli,1ZBDW@1386|Bacillus	91061|Bacilli	P	Belongs to the ABC transporter superfamily	msmX	-	-	ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1	-	-	ABC_tran,TOBE,TOBE_2
PHALIAPI_03789	224308.BSU38820	9.16e-209	577.0	COG2508@1|root,COG2508@2|Bacteria,1V649@1239|Firmicutes,4HHCD@91061|Bacilli,1ZH98@1386|Bacillus	91061|Bacilli	QT	PucR C-terminal helix-turn-helix domain	lrp	-	-	-	-	-	-	-	-	-	-	-	HTH_30
PHALIAPI_03790	224308.BSU38830	0.0	925.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4H9MF@91061|Bacilli,1ZAXK@1386|Bacillus	91061|Bacilli	C	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively	aldY	GO:0003674,GO:0003824,GO:0004029,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0018479,GO:0055114	1.2.1.3,1.2.1.67	ko:K00128,ko:K21802	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00627,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00627,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R05699,R06366,R08146	RC00047,RC00071,RC00075,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU38830	Aldedh
PHALIAPI_03791	224308.BSU38840	2.67e-187	521.0	COG1284@1|root,COG1284@2|Bacteria,1TRAU@1239|Firmicutes,4H9UY@91061|Bacilli,1ZD69@1386|Bacillus	91061|Bacilli	S	Uncharacterised 5xTM membrane BCR, YitT family COG1284	yxkD	-	-	-	-	-	-	-	-	-	-	-	DUF2179,YitT_membrane
PHALIAPI_03792	720555.BATR1942_17390	1.83e-180	507.0	2AB7G@1|root,310MW@2|Bacteria,1V2YQ@1239|Firmicutes,4HGVQ@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4352
PHALIAPI_03793	224308.BSU38860	7.06e-248	680.0	COG1087@1|root,COG1087@2|Bacteria,1TQ7N@1239|Firmicutes,4H9U5@91061|Bacilli,1ZB5V@1386|Bacillus	91061|Bacilli	M	Belongs to the NAD(P)-dependent epimerase dehydratase family	galE	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
PHALIAPI_03794	224308.BSU38870	1.16e-122	349.0	COG1881@1|root,COG1881@2|Bacteria,1V88T@1239|Firmicutes,4IRQA@91061|Bacilli,1ZMY1@1386|Bacillus	91061|Bacilli	S	Phosphatidylethanolamine-binding protein	-	-	-	ko:K06910	-	-	-	-	ko00000	-	-	-	PBP
PHALIAPI_03795	224308.BSU38880	2.73e-207	573.0	COG0583@1|root,COG0583@2|Bacteria,1UYA4@1239|Firmicutes,4HHV2@91061|Bacilli,1ZFDM@1386|Bacillus	91061|Bacilli	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
PHALIAPI_03796	224308.BSU38890	5.63e-102	296.0	arCOG10684@1|root,2ZSI3@2|Bacteria,1W1ZH@1239|Firmicutes,4I1FS@91061|Bacilli	91061|Bacilli	S	Protein of unknown function (DUF1453)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1453
PHALIAPI_03797	224308.BSU38900	6.11e-239	663.0	COG4585@1|root,COG4585@2|Bacteria,1TRFX@1239|Firmicutes,4HD1M@91061|Bacilli,1ZDHA@1386|Bacillus	91061|Bacilli	T	Signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,GAF,HATPase_c,HisKA_3,Pkinase
PHALIAPI_03798	224308.BSU38910	1.56e-147	416.0	COG2197@1|root,COG2197@2|Bacteria,1V30W@1239|Firmicutes,4HT1P@91061|Bacilli,1ZGDR@1386|Bacillus	91061|Bacilli	K	helix_turn_helix, Lux Regulon	-	-	-	ko:K02479	-	-	-	-	ko00000,ko02022	-	-	-	GerE,Response_reg
PHALIAPI_03799	224308.BSU38920	7.76e-299	815.0	COG2195@1|root,COG2195@2|Bacteria,1TP3A@1239|Firmicutes,4HAZE@91061|Bacilli,1ZCZN@1386|Bacillus	91061|Bacilli	E	Cleaves the N-terminal amino acid of tripeptides	pepT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901564	3.4.11.4	ko:K01258	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M42
PHALIAPI_03802	224308.BSU38940	8.27e-111	318.0	COG4894@1|root,COG4894@2|Bacteria,1V3WA@1239|Firmicutes,4HJ82@91061|Bacilli,1ZQ5F@1386|Bacillus	91061|Bacilli	S	LURP-one-related	yxjI	-	-	-	-	-	-	-	-	-	-	-	LOR
PHALIAPI_03803	224308.BSU38950	1.23e-276	756.0	COG0620@1|root,COG0620@2|Bacteria,1TPDQ@1239|Firmicutes,4HADW@91061|Bacilli,1ZDE8@1386|Bacillus	91061|Bacilli	E	Methionine synthase	yxjG	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
PHALIAPI_03804	224308.BSU38960	3.13e-275	752.0	COG0620@1|root,COG0620@2|Bacteria,1TPDQ@1239|Firmicutes,4HADW@91061|Bacilli,1ZDE8@1386|Bacillus	91061|Bacilli	E	Methionine synthase	yxjG	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
PHALIAPI_03805	224308.BSU38970	2.66e-172	482.0	COG1028@1|root,COG1028@2|Bacteria,1TP3G@1239|Firmicutes,4HACT@91061|Bacilli,1ZDEW@1386|Bacillus	91061|Bacilli	IQ	Catalyzes the formation of acetoacetate from 3-hydroxybutyrate	yxjF	-	1.1.1.30	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	M00088	R01361	RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short_C2
PHALIAPI_03806	224308.BSU38980	1.19e-150	424.0	COG2057@1|root,COG2057@2|Bacteria,1TNY5@1239|Firmicutes,4HBFR@91061|Bacilli,1ZB4Q@1386|Bacillus	91061|Bacilli	I	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit	scoB	-	2.8.3.5	ko:K01029	ko00072,ko00280,ko00650,map00072,map00280,map00650	-	R00410	RC00014	ko00000,ko00001,ko01000	-	-	-	CoA_trans
PHALIAPI_03807	224308.BSU38990	1.89e-167	468.0	COG1788@1|root,COG1788@2|Bacteria,1V21Q@1239|Firmicutes,4HB3E@91061|Bacilli,1ZCXP@1386|Bacillus	91061|Bacilli	I	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit	scoA	-	2.8.3.5	ko:K01028	ko00072,ko00280,ko00650,map00072,map00280,map00650	-	R00410	RC00014	ko00000,ko00001,ko01000	-	-	-	CoA_trans
PHALIAPI_03808	224308.BSU39000	0.0	875.0	COG2610@1|root,COG2610@2|Bacteria,1TQJ6@1239|Firmicutes,4HA01@91061|Bacilli,1ZCGI@1386|Bacillus	91061|Bacilli	EG	COG2610 H gluconate symporter and related permeases	yxjC	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	-	-	-	-	-	-	-	-	-	GntP_permease
PHALIAPI_03809	224308.BSU39010	1.4e-200	555.0	COG0500@1|root,COG0500@2|Bacteria,1UIYH@1239|Firmicutes,4ISX8@91061|Bacilli,1ZS7T@1386|Bacillus	91061|Bacilli	Q	Methyltransferase domain	yxjB	-	2.1.1.187	ko:K00563	-	-	R07233	RC00003	ko00000,ko01000,ko03009	-	-	-	Methyltransf_11,Methyltransf_25
PHALIAPI_03810	224308.BSU39020	2.98e-269	739.0	COG1972@1|root,COG1972@2|Bacteria,1TRSK@1239|Firmicutes,4HA8N@91061|Bacilli,1ZAW2@1386|Bacillus	91061|Bacilli	F	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family	nupG	GO:0003674,GO:0005215,GO:0005337,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015212,GO:0015213,GO:0015214,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015506,GO:0015672,GO:0015858,GO:0015861,GO:0015862,GO:0015864,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072531,GO:0098655,GO:0098660,GO:0098662,GO:1901264,GO:1901505,GO:1901642,GO:1902600	-	ko:K16323	-	-	-	-	ko00000,ko02000	2.A.41.1	-	-	Nucleos_tra2_C,Nucleos_tra2_N
PHALIAPI_03811	1051501.AYTL01000028_gene1858	2.96e-133	380.0	COG5513@1|root,COG5513@2|Bacteria,1VD7B@1239|Firmicutes,4IT9B@91061|Bacilli,1ZI85@1386|Bacillus	91061|Bacilli	T	Domain of unknown function (DUF4163)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3298,DUF4163,SH3_3
PHALIAPI_03812	224308.BSU39040	1.88e-62	191.0	2CI5E@1|root,32S7D@2|Bacteria,1VA1W@1239|Firmicutes,4HKCJ@91061|Bacilli,1ZHWY@1386|Bacillus	91061|Bacilli	-	-	yxiS	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03813	224308.BSU39050	0.0	1375.0	COG0693@1|root,COG0753@1|root,COG0693@2|Bacteria,COG0753@2|Bacteria,1TPPV@1239|Firmicutes,4H9XQ@91061|Bacilli,1ZB44@1386|Bacillus	91061|Bacilli	P	serves to protect cells from the toxic effects of hydrogen peroxide	katE	GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0042221,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070887,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1990748	1.11.1.6	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	M00532	R00009,R00602,R02670	RC00034,RC00767,RC02141,RC02755	ko00000,ko00001,ko00002,ko01000	-	-	-	Catalase,Catalase-rel,DJ-1_PfpI
PHALIAPI_03814	224308.BSU39060	1.16e-283	778.0	COG2851@1|root,COG2851@2|Bacteria,1TQQH@1239|Firmicutes,4HAGT@91061|Bacilli,1ZCEQ@1386|Bacillus	91061|Bacilli	C	Citrate transporter	citH	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0034220,GO:0044425,GO:0051179,GO:0051234,GO:0055085,GO:0098656	-	ko:K03300,ko:K11639	ko02020,map02020	-	-	-	ko00000,ko00001	2.A.11,2.A.11.1.1	-	-	CitMHS
PHALIAPI_03815	224308.BSU39070	3.06e-184	511.0	COG2273@1|root,COG2273@2|Bacteria,1UY13@1239|Firmicutes,4IPYG@91061|Bacilli,1ZRF1@1386|Bacillus	91061|Bacilli	M	licheninase activity	bglS	GO:0005575,GO:0005576	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_16
PHALIAPI_03816	224308.BSU39080	3.27e-192	534.0	COG3711@1|root,COG3711@2|Bacteria,1TT5A@1239|Firmicutes,4HC5Y@91061|Bacilli,1ZDB0@1386|Bacillus	91061|Bacilli	K	transcriptional antiterminator	licT	GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141	-	ko:K03488	-	-	-	-	ko00000,ko03000	-	-	-	CAT_RBD,PRD
PHALIAPI_03817	224308.BSU39090	8.44e-140	397.0	29T3N@1|root,30EA7@2|Bacteria,1UCB4@1239|Firmicutes,4INTI@91061|Bacilli,1ZNXJ@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03818	224308.BSU39100	2.29e-293	802.0	COG2270@1|root,COG2270@2|Bacteria,1TRTH@1239|Firmicutes,4H9VB@91061|Bacilli,1ZDX4@1386|Bacillus	91061|Bacilli	S	COG2270 Permeases of the major facilitator superfamily	yxiO	-	-	ko:K06902	ko04138,map04138	-	-	-	ko00000,ko00001,ko02000,ko04131	2.A.1.24,9.A.15.1	-	-	ATG22
PHALIAPI_03819	224308.BSU39110	0.0	919.0	COG0513@1|root,COG0513@2|Bacteria,1TPAP@1239|Firmicutes,4HBR4@91061|Bacilli,1ZB39@1386|Bacillus	91061|Bacilli	JKL	DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes	dbpA	GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360	3.6.4.13	ko:K05592	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019	-	-	-	DEAD,DbpA,Helicase_C
PHALIAPI_03820	224308.BSU39120	1.95e-271	743.0	COG2755@1|root,COG3401@1|root,COG2755@2|Bacteria,COG3401@2|Bacteria,1UZJV@1239|Firmicutes,4HUHE@91061|Bacilli,1ZM72@1386|Bacillus	91061|Bacilli	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
PHALIAPI_03823	224308.BSU39230	0.0	3923.0	COG3209@1|root,COG3209@2|Bacteria,1TR8F@1239|Firmicutes,4HBZE@91061|Bacilli,1ZDH9@1386|Bacillus	91061|Bacilli	M	COG3209 Rhs family protein	wapA	GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0004549,GO:0006139,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016078,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:0140101,GO:1901360,GO:1901361,GO:1901575	-	-	-	-	-	-	-	-	-	-	RHS_repeat
PHALIAPI_03824	224308.BSU39240	3.43e-209	580.0	COG0697@1|root,COG0697@2|Bacteria,1UAMA@1239|Firmicutes,4HA84@91061|Bacilli,1ZET8@1386|Bacillus	91061|Bacilli	EG	EamA-like transporter family	yxxF	-	-	-	-	-	-	-	-	-	-	-	EamA
PHALIAPI_03825	224308.BSU39250	8.5e-95	277.0	COG0589@1|root,COG0589@2|Bacteria,1VEJR@1239|Firmicutes,4IRSH@91061|Bacilli,1ZJAT@1386|Bacillus	91061|Bacilli	T	Belongs to the universal stress protein A family	yxiE	-	-	-	-	-	-	-	-	-	-	-	Usp
PHALIAPI_03826	224308.BSU39260	0.0	954.0	COG2723@1|root,COG2723@2|Bacteria,1TP19@1239|Firmicutes,4HA1W@91061|Bacilli,1ZQ3H@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 1 family	bglH	GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008422,GO:0015926,GO:0016787,GO:0016798,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135,GO:1901657	3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500	-	R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000	-	GT1	-	Glyco_hydro_1
PHALIAPI_03827	224308.BSU39270	0.0	1129.0	COG1263@1|root,COG1264@1|root,COG2190@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,COG2190@2|Bacteria,1TP5X@1239|Firmicutes,4HA0I@91061|Bacilli,1ZC3X@1386|Bacillus	91061|Bacilli	G	phosphotransferase system	bglP	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0015766,GO:0015771,GO:0015772,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563,GO:0090589	-	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	M00271	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.2.11,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6	-	-	PTS_EIIA_1,PTS_EIIB,PTS_EIIC
PHALIAPI_03828	279010.BL03209	2.79e-27	103.0	2EA2B@1|root,3347H@2|Bacteria,1VF39@1239|Firmicutes,4HPXR@91061|Bacilli,1ZHF9@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03829	1211035.CD30_09135	7.98e-54	175.0	2EKIF@1|root,33E8C@2|Bacteria,1W63Z@1239|Firmicutes,4I0M4@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03831	1051501.AYTL01000028_gene1832	3.36e-74	223.0	2EQXZ@1|root,33IHN@2|Bacteria,1V82E@1239|Firmicutes,4HJYB@91061|Bacilli,1ZKGD@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03832	1196324.A374_18990	6.87e-36	123.0	2CMHU@1|root,32SEU@2|Bacteria,1VDUI@1239|Firmicutes,4HXRG@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03833	1395587.P364_0115215	3.83e-55	177.0	2BIYS@1|root,32D75@2|Bacteria,1TZ3Z@1239|Firmicutes,4I8B3@91061|Bacilli,26ZGC@186822|Paenibacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03834	1220589.CD32_02190	8.62e-32	115.0	COG4304@1|root,COG4304@2|Bacteria,1V6AE@1239|Firmicutes,4HHSC@91061|Bacilli	91061|Bacilli	S	Uncharacterized protein conserved in bacteria (DUF2247)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2247
PHALIAPI_03835	1536774.H70357_25725	2.48e-59	186.0	2B44C@1|root,31WUV@2|Bacteria,1V9P2@1239|Firmicutes,4HJJP@91061|Bacilli,26YQG@186822|Paenibacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03836	1051501.AYTL01000028_gene1830	8.38e-276	769.0	COG5444@1|root,COG5444@2|Bacteria,1V8G4@1239|Firmicutes,4HJGQ@91061|Bacilli	91061|Bacilli	S	nuclease activity	-	-	-	-	-	-	-	-	-	-	-	-	LXG
PHALIAPI_03837	1051501.AYTL01000028_gene1829	1.33e-52	166.0	2CFFU@1|root,32ZHK@2|Bacteria,1VFDQ@1239|Firmicutes,4HRXU@91061|Bacilli,1ZJAX@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5344)	yxiC	-	-	-	-	-	-	-	-	-	-	-	DUF5344
PHALIAPI_03838	224308.BSU39320	5.38e-37	129.0	2EE98@1|root,3383N@2|Bacteria,1VGWV@1239|Firmicutes,4HQJB@91061|Bacilli	91061|Bacilli	S	Domain of unknown function (DUF5082)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5082
PHALIAPI_03839	720555.BATR1942_17695	0.0	1734.0	COG1061@1|root,COG3886@1|root,COG1061@2|Bacteria,COG3886@2|Bacteria,1TQ62@1239|Firmicutes,4HAJ1@91061|Bacilli,1ZAY8@1386|Bacillus	91061|Bacilli	L	HKD family nuclease	-	-	-	-	-	-	-	-	-	-	-	-	DUF3427,Helicase_C,PLDc_2,ResIII
PHALIAPI_03841	720555.BATR1942_17700	3.7e-77	231.0	COG0494@1|root,COG0494@2|Bacteria,1V6ET@1239|Firmicutes,4HIP6@91061|Bacilli,1ZG7Z@1386|Bacillus	91061|Bacilli	L	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes	mutT	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NUDIX
PHALIAPI_03842	224308.BSU39330	0.0	955.0	COG3507@1|root,COG3507@2|Bacteria,1TPHA@1239|Firmicutes,4HBSN@91061|Bacilli,1ZDPS@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 43 family	yxiA	-	3.2.1.99	ko:K06113	-	-	-	-	ko00000,ko01000	-	GH43	-	GH43_C,Glyco_hydro_43,Laminin_G_3
PHALIAPI_03843	224308.BSU39340	7.02e-103	297.0	28T9W@1|root,2ZFIH@2|Bacteria,1V1JV@1239|Firmicutes,4HFXV@91061|Bacilli,1ZGK3@1386|Bacillus	91061|Bacilli	K	Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization	hutP	GO:0006082,GO:0006355,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016054,GO:0019219,GO:0019222,GO:0019439,GO:0019752,GO:0031323,GO:0031326,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0052803,GO:0052805,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1903506,GO:2000112,GO:2001141	-	ko:K09683	-	-	-	-	ko00000,ko03000	-	-	-	HutP
PHALIAPI_03844	224308.BSU39350	0.0	978.0	COG2986@1|root,COG2986@2|Bacteria,1TPCW@1239|Firmicutes,4H9YS@91061|Bacilli,1ZC8Z@1386|Bacillus	91061|Bacilli	E	Histidine ammonia-lyase	hutH	-	4.3.1.3	ko:K01745	ko00340,ko01100,map00340,map01100	M00045	R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU39350	Lyase_aromatic
PHALIAPI_03845	224308.BSU39360	0.0	1107.0	COG2987@1|root,COG2987@2|Bacteria,1TPZ9@1239|Firmicutes,4H9NH@91061|Bacilli,1ZCMM@1386|Bacillus	91061|Bacilli	E	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate	hutU	-	4.2.1.49	ko:K01712	ko00340,ko01100,map00340,map01100	M00045	R02914	RC00804	ko00000,ko00001,ko00002,ko01000	-	-	-	Urocanase,Urocanase_C,Urocanase_N
PHALIAPI_03846	224308.BSU39370	4.32e-297	811.0	COG1228@1|root,COG1228@2|Bacteria,1TP2J@1239|Firmicutes,4HAVY@91061|Bacilli,1ZDE5@1386|Bacillus	91061|Bacilli	Q	Imidazolone-5-propionate hydrolase	hutI	-	3.5.2.7	ko:K01468	ko00340,ko01100,map00340,map01100	M00045	R02288	RC00683	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU39370	Amidohydro_1,Amidohydro_3
PHALIAPI_03847	224308.BSU39380	1.14e-229	632.0	COG0010@1|root,COG0010@2|Bacteria,1TP2A@1239|Firmicutes,4HCKQ@91061|Bacilli,1ZBPI@1386|Bacillus	91061|Bacilli	E	Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide	hutG	-	3.5.3.8	ko:K01479	ko00340,ko01100,map00340,map01100	M00045	R02285	RC00221,RC00681	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
PHALIAPI_03848	224308.BSU39390	0.0	873.0	COG0833@1|root,COG0833@2|Bacteria,1UHNR@1239|Firmicutes,4HUT7@91061|Bacilli,1ZB12@1386|Bacillus	91061|Bacilli	E	amino acid	ybgF	GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016020,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901605	-	ko:K02205,ko:K16235,ko:K16236	-	-	-	-	ko00000,ko02000	2.A.3.1,2.A.3.1.10	-	iYO844.BSU39390	AA_permease
PHALIAPI_03849	224308.BSU39400	8.11e-299	816.0	COG0213@1|root,COG0213@2|Bacteria,1TPCH@1239|Firmicutes,4H9NP@91061|Bacilli,1ZBI1@1386|Bacillus	91061|Bacilli	F	phosphorylase	pdp	GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464	2.4.2.2	ko:K00756	ko00240,ko01100,map00240,map01100	-	R01570,R01876,R02296,R02484	RC00063	ko00000,ko00001,ko01000	-	-	-	Glycos_trans_3N,Glycos_transf_3,PYNP_C
PHALIAPI_03850	224308.BSU39410	1.92e-263	724.0	COG1972@1|root,COG1972@2|Bacteria,1TRSK@1239|Firmicutes,4HA8N@91061|Bacilli,1ZAW2@1386|Bacillus	91061|Bacilli	F	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family	nupC	GO:0003674,GO:0005215,GO:0005337,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015212,GO:0015213,GO:0015214,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015506,GO:0015672,GO:0015858,GO:0015861,GO:0015862,GO:0015864,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072531,GO:0098655,GO:0098660,GO:0098662,GO:1901264,GO:1901505,GO:1901642,GO:1902600	-	ko:K11535	-	-	-	-	ko00000,ko02000	2.A.41.1	-	iYO844.BSU39410	Gate,Nucleos_tra2_C,Nucleos_tra2_N
PHALIAPI_03851	224308.BSU39420	3.38e-149	421.0	COG0274@1|root,COG0274@2|Bacteria,1TPAJ@1239|Firmicutes,4HAAJ@91061|Bacilli,1ZCZ6@1386|Bacillus	91061|Bacilli	F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate	deoC	GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	4.1.2.4	ko:K01619	ko00030,map00030	-	R01066	RC00436,RC00437	ko00000,ko00001,ko01000	-	-	iYO844.BSU39420	DeoC
PHALIAPI_03852	224308.BSU39430	1e-220	609.0	COG2390@1|root,COG2390@2|Bacteria,1TPUB@1239|Firmicutes,4HCAR@91061|Bacilli,1ZD4S@1386|Bacillus	91061|Bacilli	K	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain	deoR	GO:0003674,GO:0005488,GO:0005515,GO:0042802	-	ko:K05346	-	-	-	-	ko00000,ko03000	-	-	-	HTH_23,HTH_24,HTH_Crp_2,MarR_2,Sigma70_r4,Sugar-bind
PHALIAPI_03853	224308.BSU39440	1.51e-196	545.0	2DBB1@1|root,2Z854@2|Bacteria,1TT9P@1239|Firmicutes,4HDSP@91061|Bacilli,1ZEVA@1386|Bacillus	91061|Bacilli	S	Domain of Unknown Function (DUF1206)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1206
PHALIAPI_03854	224308.BSU39450	4.09e-251	691.0	COG3192@1|root,COG3192@2|Bacteria,1TNZF@1239|Firmicutes,4HAQ8@91061|Bacilli,1ZCSJ@1386|Bacillus	91061|Bacilli	E	Ethanolamine utilisation protein, EutH	eutH	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K04023	-	-	-	-	ko00000	-	-	iYO844.BSU39450	EutH
PHALIAPI_03855	224308.BSU39460	3.55e-315	859.0	COG2079@1|root,COG2079@2|Bacteria,1TSD7@1239|Firmicutes,4HFIN@91061|Bacilli,1ZR1G@1386|Bacillus	91061|Bacilli	S	MmgE/PrpD family	yxeQ	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0047547,GO:0071704	-	-	-	-	-	-	-	-	-	-	MmgE_PrpD
PHALIAPI_03856	224308.BSU39470	8.27e-272	744.0	COG1473@1|root,COG1473@2|Bacteria,1TPD7@1239|Firmicutes,4H9WQ@91061|Bacilli,1ZB09@1386|Bacillus	91061|Bacilli	E	hydrolase activity	yxeP	-	-	ko:K21613	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
PHALIAPI_03857	224308.BSU39480	4.8e-171	478.0	COG1126@1|root,COG1126@2|Bacteria,1TNYD@1239|Firmicutes,4H9WY@91061|Bacilli,1ZDVK@1386|Bacillus	91061|Bacilli	P	ABC transporter, ATP-binding protein	yxeO	-	-	ko:K16960,ko:K16963	ko02010,map02010	M00585,M00586	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3,3.A.1.3.13	-	-	ABC_tran
PHALIAPI_03858	224308.BSU39490	6.05e-148	417.0	COG0765@1|root,COG0765@2|Bacteria,1TQ43@1239|Firmicutes,4HCZV@91061|Bacilli,1ZESX@1386|Bacillus	91061|Bacilli	P	COG0765 ABC-type amino acid transport system, permease component	yxeN	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K10009,ko:K16962	ko02010,map02010	M00234,M00586	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.10,3.A.1.3.14	-	-	BPD_transp_1
PHALIAPI_03859	224308.BSU39500	1.01e-184	514.0	COG0834@1|root,COG0834@2|Bacteria,1TR13@1239|Firmicutes,4HNTP@91061|Bacilli,1ZFES@1386|Bacillus	91061|Bacilli	M	Belongs to the bacterial solute-binding protein 3 family	yxeM	-	-	ko:K16961	ko02010,map02010	M00586	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3	-	-	SBP_bac_3
PHALIAPI_03860	224308.BSU39510	2.99e-119	340.0	COG0454@1|root,COG0456@2|Bacteria,1V9FA@1239|Firmicutes,4HJ4W@91061|Bacilli,1ZEY7@1386|Bacillus	91061|Bacilli	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	yxeL	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_03861	224308.BSU39520	0.0	880.0	COG2141@1|root,COG2141@2|Bacteria,1TQZ0@1239|Firmicutes,4HAF9@91061|Bacilli,1ZBUG@1386|Bacillus	91061|Bacilli	C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	yxeK	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
PHALIAPI_03862	224308.BSU39540	3.05e-234	644.0	COG3049@1|root,COG3049@2|Bacteria,1TPZS@1239|Firmicutes,4HEQ3@91061|Bacilli,1ZM5U@1386|Bacillus	91061|Bacilli	M	Linear amide C-N hydrolases, choloylglycine hydrolase family	yxeI	-	3.5.1.24	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	-	R02797,R03975,R03977,R04486,R04487,R05835	RC00090,RC00096	ko00000,ko00001,ko01000	-	-	-	CBAH
PHALIAPI_03863	224308.BSU39550	3.84e-192	533.0	COG0561@1|root,COG0561@2|Bacteria,1TR16@1239|Firmicutes,4HCZ6@91061|Bacilli,1ZCPY@1386|Bacillus	91061|Bacilli	S	hydrolases of the HAD superfamily	yxeH	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_3
PHALIAPI_03866	224308.BSU39580	5.68e-39	134.0	2BBDR@1|root,324WV@2|Bacteria,1UAIT@1239|Firmicutes,4IKX9@91061|Bacilli,1ZI6G@1386|Bacillus	91061|Bacilli	-	-	yxeE	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03867	224308.BSU39590	7.57e-28	105.0	2ED14@1|root,336Y2@2|Bacteria,1VJP8@1239|Firmicutes,4HS9Y@91061|Bacilli,1ZHAI@1386|Bacillus	91061|Bacilli	-	-	yxeD	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03868	224308.BSU39600	6.79e-91	266.0	2DDWI@1|root,2ZJM0@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03869	224308.BSU39610	8.63e-226	622.0	COG0614@1|root,COG0614@2|Bacteria,1TQMK@1239|Firmicutes,4HBP4@91061|Bacilli,1ZBTM@1386|Bacillus	91061|Bacilli	P	ABC transporter	fhuD	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
PHALIAPI_03870	224308.BSU39620	5.95e-77	229.0	COG5294@1|root,COG5294@2|Bacteria,1VHCQ@1239|Firmicutes,4HNS8@91061|Bacilli,1ZJSA@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF1093)	yxeA	-	-	-	-	-	-	-	-	-	-	-	DUF1093
PHALIAPI_03871	224308.BSU39630	0.0	1186.0	COG0577@1|root,COG0577@2|Bacteria,1TR2D@1239|Firmicutes,4HAG9@91061|Bacilli,1ZB66@1386|Bacillus	91061|Bacilli	V	ABC transporter (permease)	yxdM	-	-	ko:K11636	ko02020,map02020	M00315	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.134.6	-	-	FtsX
PHALIAPI_03872	1051501.AYTL01000028_gene1796	5.21e-179	499.0	COG1136@1|root,COG1136@2|Bacteria,1TNZG@1239|Firmicutes,4H9UT@91061|Bacilli,1ZCDW@1386|Bacillus	91061|Bacilli	V	ABC transporter, ATP-binding protein	yxdL	-	-	ko:K11635	ko02020,map02020	M00315	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.134.6	-	-	ABC_tran
PHALIAPI_03873	224308.BSU39650	2.7e-231	637.0	COG0642@1|root,COG2205@2|Bacteria,1TSIC@1239|Firmicutes,4HCB6@91061|Bacilli,1ZAPT@1386|Bacillus	91061|Bacilli	T	Histidine kinase	yxdK	-	2.7.13.3	ko:K11633	ko02020,map02020	M00470	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c
PHALIAPI_03874	224308.BSU39660	1.14e-159	447.0	COG0745@1|root,COG0745@2|Bacteria,1TR32@1239|Firmicutes,4HAQ7@91061|Bacilli,1ZE1M@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	yxdJ	-	-	ko:K02483,ko:K11634	ko02020,map02020	M00470	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_03875	224308.BSU39670	2.83e-204	565.0	COG0191@1|root,COG0191@2|Bacteria,1TQ01@1239|Firmicutes,4H9ZU@91061|Bacilli,1ZEJH@1386|Bacillus	91061|Bacilli	F	Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)	fbaA	-	4.1.2.13,4.1.2.29	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167,M00344,M00345	R01068,R01070,R01829,R02568,R05378	RC00438,RC00439,RC00603,RC00604,RC00721	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU39670	F_bP_aldolase
PHALIAPI_03876	1051501.AYTL01000028_gene1792	3.26e-193	537.0	COG1082@1|root,COG1082@2|Bacteria,1TS20@1239|Firmicutes,4HD4V@91061|Bacilli,1ZCMI@1386|Bacillus	91061|Bacilli	G	Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)	iolI	-	5.3.99.11	ko:K06606	ko00562,ko01120,map00562,map01120	-	R09952	RC01513	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
PHALIAPI_03877	224308.BSU39690	5.35e-213	587.0	COG1082@1|root,COG1082@2|Bacteria,1UZXE@1239|Firmicutes,4HEG4@91061|Bacilli,1ZE6D@1386|Bacillus	91061|Bacilli	G	Xylose isomerase-like TIM barrel	iolH	-	-	ko:K06605	-	-	-	-	ko00000	-	-	-	AP_endonuc_2
PHALIAPI_03878	224308.BSU39700	1.55e-251	689.0	COG0673@1|root,COG0673@2|Bacteria,1TRHA@1239|Firmicutes,4HA6R@91061|Bacilli,1ZENE@1386|Bacillus	91061|Bacilli	S	Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively	iolG	-	1.1.1.18,1.1.1.369	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	-	R01183,R09951	RC00182	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
PHALIAPI_03879	224308.BSU39710	4.89e-297	813.0	COG0477@1|root,COG2814@2|Bacteria,1TRBM@1239|Firmicutes,4HE7W@91061|Bacilli,1ZQ91@1386|Bacillus	91061|Bacilli	EGP	Major facilitator superfamily	iolF	GO:0003674,GO:0005215,GO:0005351,GO:0005402,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0034219,GO:0034220,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098655,GO:0098660,GO:0098662,GO:1902600	-	ko:K06610	-	-	-	-	ko00000,ko02000	2.A.1.1.27	-	-	MFS_1,Sugar_tr
PHALIAPI_03880	224308.BSU39720	2.89e-221	609.0	COG1082@1|root,COG1082@2|Bacteria,1TPZ2@1239|Firmicutes,4HCIM@91061|Bacilli,1ZEF8@1386|Bacillus	91061|Bacilli	G	Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)	iolE	-	4.2.1.44	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	-	R02782,R05659	RC00782,RC01448	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
PHALIAPI_03881	224308.BSU39730	0.0	1243.0	COG3962@1|root,COG3962@2|Bacteria,1UI18@1239|Firmicutes,4HCPP@91061|Bacilli,1ZCZJ@1386|Bacillus	91061|Bacilli	E	Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)	iolD	GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009395,GO:0009987,GO:0016042,GO:0019637,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0046434,GO:0071704,GO:1901575	3.7.1.22	ko:K03336	ko00562,ko01100,ko01120,map00562,map01100,map01120	-	R08603	RC02331	ko00000,ko00001,ko01000	-	-	iYO844.BSU39730	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
PHALIAPI_03882	224308.BSU39740	1.23e-227	627.0	COG0524@1|root,COG0524@2|Bacteria,1TPGM@1239|Firmicutes,4HB78@91061|Bacilli,1ZCTX@1386|Bacillus	91061|Bacilli	G	Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)	iolC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009395,GO:0009987,GO:0016042,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0019637,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044424,GO:0044464,GO:0046434,GO:0046835,GO:0071704,GO:1901575	2.7.1.92	ko:K03338	ko00562,ko01100,ko01120,map00562,map01100,map01120	-	R05661	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	iYO844.BSU39740	PfkB
PHALIAPI_03883	224308.BSU39750	1.41e-199	552.0	COG3718@1|root,COG3718@2|Bacteria,1TR6M@1239|Firmicutes,4HCDY@91061|Bacilli,1ZCS0@1386|Bacillus	91061|Bacilli	G	Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)	iolB	-	5.3.1.30	ko:K03337	ko00562,ko01100,ko01120,map00562,map01100,map01120	-	R08503	RC00541	ko00000,ko00001,ko01000	-	-	-	KduI
PHALIAPI_03884	224308.BSU39760	0.0	972.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4H9MF@91061|Bacilli,1ZAXK@1386|Bacillus	91061|Bacilli	C	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively	iolA	GO:0003674,GO:0003824,GO:0004491,GO:0006082,GO:0006520,GO:0006573,GO:0006574,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009081,GO:0009083,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	1.2.1.18,1.2.1.27	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	M00013	R00705,R00706,R00922,R00935	RC00004,RC02723,RC02817	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
PHALIAPI_03885	224308.BSU39770	1.56e-177	494.0	COG1349@1|root,COG1349@2|Bacteria,1TTGR@1239|Firmicutes,4HEVD@91061|Bacilli,1ZDNC@1386|Bacillus	91061|Bacilli	K	COG1349 Transcriptional regulators of sugar metabolism	iolR	-	-	ko:K06608,ko:K11534	-	-	-	-	ko00000,ko03000	-	-	-	DeoRC,HTH_DeoR
PHALIAPI_03886	224308.BSU39780	3.52e-224	617.0	COG0667@1|root,COG0667@2|Bacteria,1TPIY@1239|Firmicutes,4HA4Q@91061|Bacilli,1ZCES@1386|Bacillus	91061|Bacilli	C	Aldo keto reductase	iolS	-	-	ko:K06607	-	-	-	-	ko00000,ko01000	-	-	-	Aldo_ket_red
PHALIAPI_03888	1051501.AYTL01000028_gene1780	2.13e-64	196.0	2DTR5@1|root,33MCD@2|Bacteria,1VH2H@1239|Firmicutes,4HQ9N@91061|Bacilli,1ZI67@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2653)	yxcD	-	-	-	-	-	-	-	-	-	-	-	DUF2653
PHALIAPI_03889	224308.BSU39810	4.16e-313	855.0	COG0477@1|root,COG2814@2|Bacteria,1TREV@1239|Firmicutes,4HAN1@91061|Bacilli,1ZAUM@1386|Bacillus	91061|Bacilli	U	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	csbC	GO:0003674,GO:0005215,GO:0005351,GO:0005402,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034219,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600	-	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	-	-	-	ko00000,ko00001,ko02000	2.A.1.1,2.A.1.1.2,2.A.1.1.26	-	-	Sugar_tr
PHALIAPI_03890	224308.BSU39820	0.0	1212.0	COG0326@1|root,COG0326@2|Bacteria,1TQEU@1239|Firmicutes,4HD5Z@91061|Bacilli,1ZBHK@1386|Bacillus	91061|Bacilli	O	Molecular chaperone. Has ATPase activity	htpG	-	-	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	-	-	-	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	-	-	-	HATPase_c,HATPase_c_3,HSP90
PHALIAPI_03892	224308.BSU39840	4.15e-193	536.0	COG1028@1|root,COG1028@2|Bacteria,1UYSA@1239|Firmicutes,4HBJJ@91061|Bacilli,1ZD29@1386|Bacillus	91061|Bacilli	IQ	Enoyl-(Acyl carrier protein) reductase	yxbG	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
PHALIAPI_03893	224308.BSU39850	2.43e-264	725.0	COG1309@1|root,COG1309@2|Bacteria,1UBJ1@1239|Firmicutes,4IMYN@91061|Bacilli,1ZM8W@1386|Bacillus	91061|Bacilli	K	Bacterial regulatory proteins, tetR family	yxbF	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	TetR_N
PHALIAPI_03894	224308.BSU39860	1.89e-310	847.0	COG1012@1|root,COG1012@2|Bacteria,1TP4S@1239|Firmicutes,4HB97@91061|Bacilli,1ZBGZ@1386|Bacillus	91061|Bacilli	C	Belongs to the aldehyde dehydrogenase family	aldX	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
PHALIAPI_03895	326423.RBAM_036940	1.15e-41	143.0	COG1714@1|root,COG1714@2|Bacteria,1VIH4@1239|Firmicutes,4HSGI@91061|Bacilli,1ZF2E@1386|Bacillus	91061|Bacilli	S	membrane protein domain	yxaI	-	-	-	-	-	-	-	-	-	-	-	RDD
PHALIAPI_03896	224308.BSU39940	5.06e-114	346.0	COG1520@1|root,COG1520@2|Bacteria,1V9TE@1239|Firmicutes,4HJ03@91061|Bacilli,1ZJSW@1386|Bacillus	91061|Bacilli	S	PQQ-like domain	yxaL	-	-	-	-	-	-	-	-	-	-	-	Big_2,PQQ,PQQ_2,PQQ_3,SLH
PHALIAPI_03897	224308.BSU39950	1.18e-84	251.0	29RX6@1|root,34C2Q@2|Bacteria,1UAPG@1239|Firmicutes,4HY0W@91061|Bacilli,1ZISF@1386|Bacillus	91061|Bacilli	S	Family of unknown function (DUF5391)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5391
PHALIAPI_03898	224308.BSU39960	4.7e-98	285.0	COG1714@1|root,COG1714@2|Bacteria,1VIH4@1239|Firmicutes,4HSGI@91061|Bacilli,1ZF2E@1386|Bacillus	91061|Bacilli	S	membrane protein domain	yxaI	-	-	-	-	-	-	-	-	-	-	-	RDD
PHALIAPI_03899	224308.BSU39970	9.22e-287	783.0	COG2311@1|root,COG2311@2|Bacteria,1TQNS@1239|Firmicutes,4HCR3@91061|Bacilli,1ZBX3@1386|Bacillus	91061|Bacilli	P	Protein of unknown function (DUF418)	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
PHALIAPI_03900	224308.BSU39980	1.22e-249	684.0	COG1917@1|root,COG1917@2|Bacteria,1V0NH@1239|Firmicutes,4HFF0@91061|Bacilli,1ZEAB@1386|Bacillus	91061|Bacilli	S	AraC-like ligand binding domain	-	-	1.13.11.24	ko:K07155	-	-	-	-	ko00000,ko01000	-	-	-	Cupin_2
PHALIAPI_03901	224308.BSU39990	1.12e-129	369.0	COG1309@1|root,COG1309@2|Bacteria,1V7QU@1239|Firmicutes,4HJIT@91061|Bacilli,1ZGD2@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yxaF	-	-	ko:K18939	-	M00715	-	-	ko00000,ko00002,ko03000	-	-	-	TetR_N
PHALIAPI_03902	224308.BSU40000	8.67e-255	699.0	COG1028@1|root,COG1028@2|Bacteria,1URGX@1239|Firmicutes,4HC4W@91061|Bacilli,1ZF92@1386|Bacillus	91061|Bacilli	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	yxnA	-	-	-	-	-	-	-	-	-	-	-	adh_short
PHALIAPI_03903	224308.BSU40010	6.83e-94	274.0	COG1846@1|root,COG1846@2|Bacteria,1V7G6@1239|Firmicutes,4HM9I@91061|Bacilli,1ZH4J@1386|Bacillus	91061|Bacilli	K	helix_turn_helix multiple antibiotic resistance protein	-	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
PHALIAPI_03904	224308.BSU40021	2.53e-78	234.0	COG1380@1|root,COG1380@2|Bacteria,1VE19@1239|Firmicutes,4HMWP@91061|Bacilli,1ZQGW@1386|Bacillus	91061|Bacilli	S	LrgA family	-	-	-	ko:K06518	-	-	-	-	ko00000,ko02000	1.E.14.2	-	-	LrgA
PHALIAPI_03905	224308.BSU40022	1.27e-152	430.0	COG1346@1|root,COG1346@2|Bacteria,1TRGN@1239|Firmicutes,4HF0M@91061|Bacilli,1ZFQ6@1386|Bacillus	91061|Bacilli	M	effector of murein hydrolase	yxaC	-	-	-	-	-	-	-	-	-	-	-	LrgB
PHALIAPI_03906	224308.BSU40030	2.97e-244	671.0	COG5039@1|root,COG5039@2|Bacteria,1V5MK@1239|Firmicutes,4HB4G@91061|Bacilli,1ZR1U@1386|Bacillus	91061|Bacilli	GM	Polysaccharide pyruvyl transferase	-	-	-	ko:K19426	-	-	-	-	ko00000,ko01000	-	-	-	PS_pyruv_trans
PHALIAPI_03907	224308.BSU40040	1.92e-262	720.0	COG1929@1|root,COG1929@2|Bacteria,1TPSI@1239|Firmicutes,4HA91@91061|Bacilli,1ZC1D@1386|Bacillus	91061|Bacilli	G	Belongs to the glycerate kinase type-1 family	glxK	-	2.7.1.165	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	-	R08572	RC00002,RC00428	ko00000,ko00001,ko01000	-	-	-	Gly_kinase
PHALIAPI_03908	224308.BSU40050	2.56e-163	458.0	COG1802@1|root,COG1802@2|Bacteria,1TSJY@1239|Firmicutes,4HBY3@91061|Bacilli,1ZCQF@1386|Bacillus	91061|Bacilli	K	transcriptional	gntR	-	-	ko:K11476	-	-	-	-	ko00000,ko03000	-	-	-	FCD,GntR
PHALIAPI_03909	224308.BSU40060	0.0	1039.0	COG1070@1|root,COG1070@2|Bacteria,1TQ1I@1239|Firmicutes,4H9W6@91061|Bacilli,1ZD0J@1386|Bacillus	91061|Bacilli	G	Belongs to the FGGY kinase family	gntK	-	2.7.1.12	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	-	R01737	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
PHALIAPI_03910	224308.BSU40070	2.05e-295	809.0	COG2610@1|root,COG2610@2|Bacteria,1TQ14@1239|Firmicutes,4HB0Y@91061|Bacilli,1ZAYI@1386|Bacillus	91061|Bacilli	EG	COG2610 H gluconate symporter and related permeases	gntP	GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0015075,GO:0015128,GO:0015144,GO:0015318,GO:0015711,GO:0015718,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034219,GO:0034220,GO:0035429,GO:0042873,GO:0042879,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098656,GO:1903825,GO:1905039	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
PHALIAPI_03911	224308.BSU40080	0.0	940.0	COG0362@1|root,COG0362@2|Bacteria,1TP4I@1239|Firmicutes,4H9NC@91061|Bacilli,1ZBRV@1386|Bacillus	91061|Bacilli	G	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH	gntZ	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
PHALIAPI_03912	224308.BSU40090	2.68e-135	382.0	COG0450@1|root,COG0450@2|Bacteria,1TQU7@1239|Firmicutes,4HA2M@91061|Bacilli,1ZCZP@1386|Bacillus	91061|Bacilli	O	Alkyl hydroperoxide reductase	ahpC	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
PHALIAPI_03913	224308.BSU40100	0.0	990.0	COG3634@1|root,COG3634@2|Bacteria,1TPYN@1239|Firmicutes,4H9W1@91061|Bacilli,1ZCRN@1386|Bacillus	91061|Bacilli	O	Alkyl hydroperoxide reductase	ahpF	-	-	ko:K03387	-	-	-	-	ko00000,ko01000	-	-	-	Pyr_redox_2,Thioredoxin_3
PHALIAPI_03914	1340434.AXVA01000023_gene3375	1.11e-237	664.0	COG2327@1|root,COG2327@2|Bacteria,1TQDF@1239|Firmicutes,4HM0Z@91061|Bacilli,1ZCUH@1386|Bacillus	91061|Bacilli	S	Polysaccharide pyruvyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	PS_pyruv_trans
PHALIAPI_03915	224308.BSU40110	0.0	999.0	COG2723@1|root,COG2723@2|Bacteria,1TP19@1239|Firmicutes,4HA1W@91061|Bacilli,1ZQ3H@1386|Bacillus	91061|Bacilli	G	Belongs to the glycosyl hydrolase 1 family	bglA	GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008422,GO:0015926,GO:0016787,GO:0016798,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135,GO:1901657	3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500	-	R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000	-	GT1	-	Glyco_hydro_1
PHALIAPI_03916	224308.BSU40120	1.67e-42	142.0	COG2190@1|root,COG2190@2|Bacteria	2|Bacteria	G	phosphoenolpyruvate-dependent sugar phosphotransferase system	-	-	2.7.1.199	ko:K02777,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	M00265,M00266,M00268,M00270,M00272,M00303,M00806,M00809	R02738,R02780,R04111,R04394,R05132,R08559	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.1,4.A.1.1.13,4.A.1.1.14,4.A.1.1.9	-	-	PTS_EIIA_1,PTS_EIIB
PHALIAPI_03917	224308.BSU40130	1.13e-158	446.0	COG2188@1|root,COG2188@2|Bacteria,1V2M8@1239|Firmicutes,4HGRM@91061|Bacilli,1ZDVR@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yydK	-	-	ko:K03489	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
PHALIAPI_03918	224308.BSU40139	1.44e-24	92.4	2C0AP@1|root,2ZRKA@2|Bacteria,1W4E0@1239|Firmicutes,4I06F@91061|Bacilli,1ZP04@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03919	224308.BSU40140	6.41e-151	426.0	2EWB9@1|root,33PQ0@2|Bacteria,1VQYZ@1239|Firmicutes,4HT5C@91061|Bacilli,1ZMW8@1386|Bacillus	91061|Bacilli	S	ABC-2 family transporter protein	-	-	-	ko:K16916	ko02010,map02010	M00583	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.133.1	-	-	-
PHALIAPI_03920	224308.BSU40150	8.4e-143	403.0	COG1131@1|root,COG1131@2|Bacteria,1V3UQ@1239|Firmicutes,4HIDP@91061|Bacilli,1ZMR9@1386|Bacillus	91061|Bacilli	P	ABC transporter	-	-	-	ko:K16917	ko02010,map02010	M00583	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.133.1	-	-	ABC_tran
PHALIAPI_03921	1051501.AYTL01000028_gene1746	0.0	1281.0	COG3855@1|root,COG3855@2|Bacteria,1TPFU@1239|Firmicutes,4HBAN@91061|Bacilli,1ZE8H@1386|Bacillus	91061|Bacilli	G	Firmicute fructose-1,6-bisphosphatase	fbp	-	3.1.3.11	ko:K04041	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00165,M00167	R00762,R04780	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FBPase_2
PHALIAPI_03922	1408424.JHYI01000042_gene103	0.0	1650.0	COG3587@1|root,COG3587@2|Bacteria,1TPRR@1239|Firmicutes,4HBNH@91061|Bacilli,1ZBGJ@1386|Bacillus	91061|Bacilli	V	Type III restriction enzyme, res subunit	XK27_03440	-	3.1.21.5	ko:K01156	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	ResIII
PHALIAPI_03923	1408424.JHYI01000042_gene104	2.11e-184	544.0	COG2189@1|root,COG2189@2|Bacteria,1TR8A@1239|Firmicutes,4HBP1@91061|Bacilli,1ZDYP@1386|Bacillus	91061|Bacilli	L	DNA methylase	mod	-	2.1.1.72	ko:K00571,ko:K07316	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	N6_N4_Mtase
PHALIAPI_03924	1121423.JONT01000036_gene875	2.57e-169	476.0	COG1074@1|root,COG1074@2|Bacteria,1UT0N@1239|Firmicutes,250QQ@186801|Clostridia	186801|Clostridia	L	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_1
PHALIAPI_03925	1121423.JONT01000036_gene876	0.0	1347.0	COG0210@1|root,COG0210@2|Bacteria,1TWH7@1239|Firmicutes,24AKG@186801|Clostridia	186801|Clostridia	L	DNA helicase	-	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	PDDEXK_1,UvrD-helicase,UvrD_C
PHALIAPI_03926	720555.BATR1942_18175	5e-106	306.0	COG1576@1|root,COG1576@2|Bacteria,1V3JM@1239|Firmicutes,4HFP8@91061|Bacilli,1ZFK3@1386|Bacillus	91061|Bacilli	J	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA	rlmH	-	2.1.1.177	ko:K00783	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SPOUT_MTase
PHALIAPI_03928	224308.BSU40240	2.15e-85	252.0	2DKCH@1|root,32UEV@2|Bacteria,1VDU5@1239|Firmicutes,4HN5E@91061|Bacilli,1ZJIW@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	YesK
PHALIAPI_03929	224308.BSU40250	8.26e-294	801.0	COG1063@1|root,COG1063@2|Bacteria,1TPIW@1239|Firmicutes,4HB2G@91061|Bacilli,1ZB9D@1386|Bacillus	91061|Bacilli	E	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases	yycR	-	1.1.1.1,1.1.1.284,1.2.1.46	ko:K00121,ko:K00148	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	-	R00604,R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00188,RC00649,RC01715,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
PHALIAPI_03931	224308.BSU40260	6.44e-41	135.0	29RYM@1|root,30D2Z@2|Bacteria,1UARQ@1239|Firmicutes,4IM4G@91061|Bacilli,1ZJ4M@1386|Bacillus	91061|Bacilli	S	Protein of unknown function (DUF2651)	yycQ	-	-	-	-	-	-	-	-	-	-	-	DUF2651
PHALIAPI_03932	224308.BSU40270	1.2e-263	724.0	2E4ET@1|root,32Z9Z@2|Bacteria,1VIUZ@1239|Firmicutes,4HPKC@91061|Bacilli,1ZHK1@1386|Bacillus	91061|Bacilli	-	-	yycP	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03933	224308.BSU40280	1.13e-167	469.0	COG3863@1|root,COG3863@2|Bacteria,1V69Q@1239|Firmicutes,4HIEK@91061|Bacilli,1ZHR3@1386|Bacillus	91061|Bacilli	S	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	yycO	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C92
PHALIAPI_03934	224308.BSU40290	1.06e-110	318.0	COG0454@1|root,COG0456@2|Bacteria,1VAU8@1239|Firmicutes,4HMA6@91061|Bacilli,1ZFP4@1386|Bacillus	91061|Bacilli	K	Acetyltransferase	yycN	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
PHALIAPI_03935	1051501.AYTL01000028_gene1733	3.03e-239	660.0	COG0457@1|root,COG0457@2|Bacteria,1UV2Q@1239|Firmicutes,4I405@91061|Bacilli,1ZF04@1386|Bacillus	1051501.AYTL01000028_gene1733|-	S	aspartate phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03937	224308.BSU40320	3.22e-213	588.0	COG0010@1|root,COG0010@2|Bacteria,1TR10@1239|Firmicutes,4HAT5@91061|Bacilli,1ZCJY@1386|Bacillus	91061|Bacilli	E	Belongs to the arginase family	rocF	GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605	3.5.3.1	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	M00029,M00134	R00551	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
PHALIAPI_03938	224308.BSU40330	0.0	881.0	COG0833@1|root,COG0833@2|Bacteria,1UHNR@1239|Firmicutes,4HUT7@91061|Bacilli,1ZB12@1386|Bacillus	91061|Bacilli	E	amino acid	rocE	GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016020,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901605	-	ko:K02205,ko:K16235,ko:K16236	-	-	-	-	ko00000,ko02000	2.A.3.1,2.A.3.1.10	-	iYO844.BSU39390	AA_permease
PHALIAPI_03939	224308.BSU40340	7.11e-295	804.0	COG4992@1|root,COG4992@2|Bacteria,1TP9S@1239|Firmicutes,4HA2Y@91061|Bacilli,1ZAV3@1386|Bacillus	91061|Bacilli	E	Catalyzes the interconversion of ornithine to glutamate semialdehyde	rocD	GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009064,GO:0009987,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901605	2.6.1.13	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R00667	RC00006,RC00062	ko00000,ko00001,ko01000,ko01007	-	-	iYO844.BSU40340	Aminotran_3
PHALIAPI_03940	224308.BSU40350	0.0	898.0	COG3829@1|root,COG3829@2|Bacteria,1TP0E@1239|Firmicutes,4HC5M@91061|Bacilli,1ZB0M@1386|Bacillus	91061|Bacilli	KT	COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains	rocR	GO:0006082,GO:0006355,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031326,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901605,GO:1903506,GO:2000112,GO:2001141	-	ko:K06714	-	-	-	-	ko00000,ko03000	-	-	-	HTH_8,PAS,PAS_4,PAS_9,Sigma54_activat
PHALIAPI_03941	224308.BSU40360	2.82e-280	767.0	COG0265@1|root,COG0265@2|Bacteria,1TRM8@1239|Firmicutes,4HA31@91061|Bacilli,1ZBNF@1386|Bacillus	91061|Bacilli	O	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain	yyxA	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
PHALIAPI_03942	224308.BSU40370	6.64e-190	527.0	COG1235@1|root,COG1235@2|Bacteria,1TQ8E@1239|Firmicutes,4HAKD@91061|Bacilli,1ZASY@1386|Bacillus	91061|Bacilli	S	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I	vicX	-	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B,Lactamase_B_2
PHALIAPI_03943	224308.BSU40380	1.2e-200	555.0	COG4853@1|root,COG4853@2|Bacteria,1V1FW@1239|Firmicutes,4HFWZ@91061|Bacilli,1ZDGV@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yycI	-	-	-	-	-	-	-	-	-	-	-	YycI
PHALIAPI_03944	224308.BSU40390	0.0	894.0	COG4863@1|root,COG4863@2|Bacteria,1UV48@1239|Firmicutes,4HF30@91061|Bacilli,1ZD30@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yycH	-	-	-	-	-	-	-	-	-	-	-	YycH
PHALIAPI_03945	224308.BSU40400	0.0	1160.0	COG5002@1|root,COG5002@2|Bacteria,1TQ1H@1239|Firmicutes,4HA52@91061|Bacilli,1ZCQI@1386|Bacillus	91061|Bacilli	T	Histidine kinase	vicK	-	2.7.13.3	ko:K07652	ko02020,map02020	M00459	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA,PAS,PAS_9
PHALIAPI_03946	224308.BSU40410	1.45e-172	481.0	COG0745@1|root,COG0745@2|Bacteria,1TPQG@1239|Firmicutes,4HA8Q@91061|Bacilli,1ZAT8@1386|Bacillus	91061|Bacilli	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	yycF	GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141	-	ko:K07668	ko02020,map02020	M00459	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
PHALIAPI_03951	1051501.AYTL01000028_gene1721	1.29e-314	856.0	COG0104@1|root,COG0104@2|Bacteria,1TQ4C@1239|Firmicutes,4H9YT@91061|Bacilli,1ZBF8@1386|Bacillus	91061|Bacilli	F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP	purA	GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.4	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	M00049	R01135	RC00458,RC00459	ko00000,ko00001,ko00002,ko01000	-	-	-	Adenylsucc_synt
PHALIAPI_03952	224308.BSU40430	3.29e-99	287.0	COG0346@1|root,COG0346@2|Bacteria,1V4ST@1239|Firmicutes,4HHEE@91061|Bacilli,1ZFZT@1386|Bacillus	91061|Bacilli	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	yycE	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
PHALIAPI_03953	224308.BSU40440	0.0	869.0	COG0305@1|root,COG0305@2|Bacteria,1TPCT@1239|Firmicutes,4H9Y8@91061|Bacilli,1ZBUR@1386|Bacillus	91061|Bacilli	L	Participates in initiation and elongation during chromosome replication	dnaB	GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576	3.6.4.12	ko:K02314	ko03030,ko04112,map03030,map04112	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB,DnaB_C
PHALIAPI_03954	224308.BSU40450	3.48e-40	132.0	2EDFP@1|root,337BX@2|Bacteria,1VGBD@1239|Firmicutes,4HRJ6@91061|Bacilli,1ZK2J@1386|Bacillus	91061|Bacilli	S	Uncharacterized protein conserved in bacteria (DUF2188)	yycD	-	-	-	-	-	-	-	-	-	-	-	DUF2188
PHALIAPI_03956	224308.BSU40470	1.89e-22	86.7	COG3093@1|root,COG3093@2|Bacteria,1VNWW@1239|Firmicutes,4HRUI@91061|Bacilli,1ZK0J@1386|Bacillus	91061|Bacilli	K	YycC-like protein	yycC	-	-	-	-	-	-	-	-	-	-	-	YycC
PHALIAPI_03957	224308.BSU40480	3.44e-282	772.0	COG2807@1|root,COG2807@2|Bacteria,1TP9R@1239|Firmicutes,4H9YZ@91061|Bacilli,1ZC26@1386|Bacillus	91061|Bacilli	P	COG2807 Cyanate permease	yycB	-	-	ko:K03449	-	-	-	-	ko00000,ko02000	2.A.1.17	-	-	MFS_1
PHALIAPI_03958	224308.BSU40490	0.0	1244.0	COG1807@1|root,COG1807@2|Bacteria,1TPGI@1239|Firmicutes,4HCEY@91061|Bacilli,1ZCFV@1386|Bacillus	91061|Bacilli	M	COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	ykcB	-	-	-	-	-	-	-	-	-	-	-	PMT_2
PHALIAPI_03959	224308.BSU40500	2.74e-96	281.0	COG0359@1|root,COG0359@2|Bacteria,1V6QG@1239|Firmicutes,4HIKJ@91061|Bacilli,1ZGEE@1386|Bacillus	91061|Bacilli	J	binds to the 23S rRNA	rplI	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02939	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L9_C,Ribosomal_L9_N
PHALIAPI_03960	224308.BSU40510	0.0	1253.0	COG3887@1|root,COG3887@2|Bacteria,1TPGP@1239|Firmicutes,4HBVH@91061|Bacilli,1ZCB0@1386|Bacillus	91061|Bacilli	T	signaling protein consisting of a modified GGDEF domain and a DHH domain	yybT	-	-	-	-	-	-	-	-	-	-	-	DHH,DHHA1
PHALIAPI_03961	224308.BSU40520	1.23e-203	565.0	COG4241@1|root,COG4241@2|Bacteria,1UZYE@1239|Firmicutes,4HAFH@91061|Bacilli,1ZC1B@1386|Bacillus	91061|Bacilli	S	membrane	yybS	-	-	-	-	-	-	-	-	-	-	-	DUF2232
PHALIAPI_03963	224308.BSU40530	3.38e-109	314.0	COG5577@1|root,COG5577@2|Bacteria,1V91D@1239|Firmicutes,4HJ0J@91061|Bacilli,1ZGWF@1386|Bacillus	91061|Bacilli	M	Spore coat protein	cotF	-	-	ko:K06329	-	-	-	-	ko00000	-	-	-	Coat_F
PHALIAPI_03964	224308.BSU40540	1.3e-87	257.0	COG1733@1|root,COG1733@2|Bacteria,1VA9M@1239|Firmicutes,4HH0A@91061|Bacilli,1ZHCV@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yybR	-	-	-	-	-	-	-	-	-	-	-	HxlR
PHALIAPI_03965	224308.BSU40550	5.7e-209	579.0	COG1227@1|root,COG1227@2|Bacteria,1TPH6@1239|Firmicutes,4H9T8@91061|Bacilli,1ZBEH@1386|Bacillus	91061|Bacilli	C	Inorganic pyrophosphatase	ppaC	GO:0003674,GO:0003824,GO:0004427,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0044237,GO:0044424,GO:0044464	3.6.1.1	ko:K15986	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	DHH,DHHA2
PHALIAPI_03966	224308.BSU40560	2.73e-91	268.0	2A2UI@1|root,30R8G@2|Bacteria,1TZ2Y@1239|Firmicutes,4I89Y@91061|Bacilli,1ZG0T@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_03968	224308.BSU40570	1.01e-307	839.0	COG2271@1|root,COG2271@2|Bacteria,1TP6X@1239|Firmicutes,4HEVA@91061|Bacilli,1ZCX2@1386|Bacillus	91061|Bacilli	G	COG0477 Permeases of the major facilitator superfamily	yybO	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0044425,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944	-	ko:K03535,ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.1,2.A.1.14.2	-	iYO844.BSU02480	MFS_1
PHALIAPI_03969	720555.BATR1942_18415	1.78e-141	403.0	COG0789@1|root,COG0789@2|Bacteria,1UDUH@1239|Firmicutes,4HCYB@91061|Bacilli,1ZFST@1386|Bacillus	91061|Bacilli	K	TipAS antibiotic-recognition domain	-	-	-	-	-	-	-	-	-	-	-	-	MerR_1,TipAS
PHALIAPI_03970	224308.BSU40630	4.13e-183	509.0	28I7X@1|root,2Z8AS@2|Bacteria,1UTKU@1239|Firmicutes,4HHB9@91061|Bacilli,1ZS7U@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
PHALIAPI_03971	224308.BSU40640	2.05e-86	254.0	COG4319@1|root,COG4319@2|Bacteria,1V5V3@1239|Firmicutes,4HIZV@91061|Bacilli,1ZGJ3@1386|Bacillus	91061|Bacilli	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440,SnoaL_3
PHALIAPI_03972	224308.BSU40650	3.28e-161	456.0	COG1357@1|root,COG1357@2|Bacteria,1TR7Y@1239|Firmicutes,4HBDH@91061|Bacilli,1ZBA0@1386|Bacillus	91061|Bacilli	S	Pentapeptide repeat-containing protein	yybG	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide
PHALIAPI_03973	224308.BSU40660	5.24e-278	761.0	COG0477@1|root,COG2814@2|Bacteria,1TQKU@1239|Firmicutes,4HA5Q@91061|Bacilli,1ZCSQ@1386|Bacillus	91061|Bacilli	EGP	COG0477 Permeases of the major facilitator superfamily	yybF	-	-	ko:K08224	-	-	-	-	ko00000,ko02000	2.A.1.36	-	-	MFS_1,Sugar_tr
PHALIAPI_03974	224308.BSU40670	1.86e-210	581.0	COG0583@1|root,COG0583@2|Bacteria,1TRVX@1239|Firmicutes,4HDHR@91061|Bacilli,1ZQ2H@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	yybE	GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363,GO:1990837	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
PHALIAPI_03975	224308.BSU40680	1.26e-100	291.0	COG2153@1|root,COG2153@2|Bacteria,1VA2J@1239|Firmicutes,4HKF5@91061|Bacilli,1ZGIP@1386|Bacillus	91061|Bacilli	S	Acetyltransferase (GNAT) domain	yjcF	GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10
PHALIAPI_03976	224308.BSU40690	1.66e-95	280.0	2BWFV@1|root,32QWV@2|Bacteria,1V8UN@1239|Firmicutes,4HK47@91061|Bacilli,1ZHNT@1386|Bacillus	91061|Bacilli	-	-	yybC	-	-	-	-	-	-	-	-	-	-	-	DUF2798
PHALIAPI_03977	1051501.AYTL01000028_gene1697	8.1e-186	519.0	COG0583@1|root,COG0583@2|Bacteria,1UZBV@1239|Firmicutes,4HB7X@91061|Bacilli,1ZRMK@1386|Bacillus	91061|Bacilli	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
PHALIAPI_03978	1274524.BSONL12_14221	1.67e-111	323.0	COG1280@1|root,COG1280@2|Bacteria,1TSNA@1239|Firmicutes,4HHZJ@91061|Bacilli,1ZR3B@1386|Bacillus	91061|Bacilli	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
PHALIAPI_03979	1274524.BSONL12_14216	6.44e-26	98.2	COG0346@1|root,COG0346@2|Bacteria,1V7D7@1239|Firmicutes,4HIGP@91061|Bacilli,1ZG4W@1386|Bacillus	91061|Bacilli	E	COG0346 Lactoylglutathione lyase and related lyases	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase,NUDIX
PHALIAPI_03980	224308.BSU40700	4.18e-162	453.0	COG0491@1|root,COG0491@2|Bacteria,1TQGU@1239|Firmicutes,4HBJ3@91061|Bacilli,1ZQQH@1386|Bacillus	91061|Bacilli	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
PHALIAPI_03981	224308.BSU40710	4.54e-100	290.0	COG1846@1|root,COG1846@2|Bacteria,1V3PS@1239|Firmicutes,4HFN6@91061|Bacilli,1ZFRK@1386|Bacillus	91061|Bacilli	K	transcriptional	yybA	-	-	-	-	-	-	-	-	-	-	-	MarR
PHALIAPI_03982	224308.BSU40720	3.44e-89	263.0	COG2153@1|root,COG2153@2|Bacteria,1VA2J@1239|Firmicutes,4HKF5@91061|Bacilli,1ZGIP@1386|Bacillus	91061|Bacilli	S	Acetyltransferase (GNAT) domain	yjcF	GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10
PHALIAPI_03983	224308.BSU40730	4.99e-124	355.0	COG2364@1|root,COG2364@2|Bacteria,1V3NC@1239|Firmicutes,4HGRQ@91061|Bacilli,1ZCBH@1386|Bacillus	91061|Bacilli	S	Membrane	yyaS	-	-	ko:K07149	-	-	-	-	ko00000	-	-	-	-
PHALIAPI_03984	224308.BSU40740	6.41e-118	337.0	COG0454@1|root,COG0456@2|Bacteria,1V1D1@1239|Firmicutes,4HK2F@91061|Bacilli,1ZR23@1386|Bacillus	91061|Bacilli	K	Acetyltransferase (GNAT) domain	-	-	-	ko:K19273	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Acetyltransf_1
PHALIAPI_03985	1051501.AYTL01000028_gene1689	1.44e-83	246.0	COG2315@1|root,COG2315@2|Bacteria,1V6Z6@1239|Firmicutes,4HQKA@91061|Bacilli,1ZH0D@1386|Bacillus	91061|Bacilli	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
PHALIAPI_03986	224308.BSU40760	2.03e-135	383.0	COG0262@1|root,COG0262@2|Bacteria,1TRY1@1239|Firmicutes,4HC69@91061|Bacilli,1ZRR0@1386|Bacillus	91061|Bacilli	H	RibD C-terminal domain	yyaP	-	-	-	-	-	-	-	-	-	-	-	RibD_C
PHALIAPI_03988	1051501.AYTL01000028_gene1684	7.95e-36	134.0	COG1331@1|root,COG1331@2|Bacteria,1TPRD@1239|Firmicutes,4H9ZS@91061|Bacilli,1ZCEN@1386|Bacillus	91061|Bacilli	O	COG1331 Highly conserved protein containing a thioredoxin domain	yyaL	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Glyco_hydro_9,Thioredox_DsbH
PHALIAPI_03989	224308.BSU25780	4.68e-99	287.0	COG0394@1|root,COG0394@2|Bacteria,1V3JW@1239|Firmicutes,4HH49@91061|Bacilli,1ZFM2@1386|Bacillus	91061|Bacilli	T	Catalyzes the reduction of arsenate As(V) to arsenite As(III)	arsC	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114	1.20.4.1	ko:K03741	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
PHALIAPI_03990	224308.BSU25790	9.28e-229	632.0	COG0798@1|root,COG0798@2|Bacteria,1TRMD@1239|Firmicutes,4HC8A@91061|Bacilli,1ZD7K@1386|Bacillus	91061|Bacilli	P	Arsenic resistance protein	arsB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015104,GO:0015105,GO:0015291,GO:0015297,GO:0015318,GO:0015698,GO:0015699,GO:0015700,GO:0016020,GO:0022804,GO:0022857,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656	-	ko:K03325	-	-	-	-	ko00000,ko02000	2.A.59	-	iYO844.BSU25790	SBF
PHALIAPI_03991	224308.BSU25800	1.66e-100	291.0	COG0346@1|root,COG0346@2|Bacteria,1V6K2@1239|Firmicutes,4HJ55@91061|Bacilli,1ZGBR@1386|Bacillus	91061|Bacilli	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	cadI	GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0050896	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
PHALIAPI_03992	224308.BSU25810	4.93e-69	208.0	COG0640@1|root,COG0640@2|Bacteria,1V9XT@1239|Firmicutes,4HKP8@91061|Bacilli,1ZI0T@1386|Bacillus	91061|Bacilli	K	ArsR family transcriptional regulator	arsR	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	ko:K03892	-	-	-	-	ko00000,ko03000	-	-	-	HTH_20,HTH_5
PHALIAPI_03993	1178537.BA1_12444	2.05e-191	532.0	COG1396@1|root,COG1396@2|Bacteria,1TSJ6@1239|Firmicutes,4HC63@91061|Bacilli,1ZAXH@1386|Bacillus	91061|Bacilli	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_31
PHALIAPI_03994	1051501.AYTL01000028_gene1686	2.42e-282	773.0	COG0304@1|root,COG0304@2|Bacteria,1TPA7@1239|Firmicutes,4H9SD@91061|Bacilli,1ZE0I@1386|Bacillus	91061|Bacilli	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	fabF_1	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
PHALIAPI_03995	1051501.AYTL01000028_gene1684	6.02e-37	137.0	COG1331@1|root,COG1331@2|Bacteria,1TPRD@1239|Firmicutes,4H9ZS@91061|Bacilli,1ZCEN@1386|Bacillus	91061|Bacilli	O	COG1331 Highly conserved protein containing a thioredoxin domain	yyaL	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Glyco_hydro_9,Thioredox_DsbH
PHALIAPI_03996	46234.ANA_C13581	1.43e-137	407.0	COG0863@1|root,COG0863@2|Bacteria,1G1WV@1117|Cyanobacteria,1HRCG@1161|Nostocales	1117|Cyanobacteria	L	DNA methylase	-	-	2.1.1.113	ko:K00590	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	N6_N4_Mtase
PHALIAPI_03997	46234.ANA_C13580	1.09e-139	404.0	28M70@1|root,2ZAKI@2|Bacteria,1G9WR@1117|Cyanobacteria,1HQCS@1161|Nostocales	1117|Cyanobacteria	L	Bpu10I restriction endonuclease	-	-	-	-	-	-	-	-	-	-	-	-	RE_Bpu10I
PHALIAPI_03998	224308.BSU40820	0.0	1373.0	COG1331@1|root,COG1331@2|Bacteria,1TPRD@1239|Firmicutes,4H9ZS@91061|Bacilli,1ZCEN@1386|Bacillus	91061|Bacilli	O	COG1331 Highly conserved protein containing a thioredoxin domain	yyaL	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Glyco_hydro_9,Thioredox_DsbH
PHALIAPI_03999	224308.BSU40830	1.59e-210	582.0	COG1266@1|root,COG1266@2|Bacteria,1VCI6@1239|Firmicutes,4HUC0@91061|Bacilli,1ZFTH@1386|Bacillus	91061|Bacilli	S	CAAX protease self-immunity	yyaK	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
PHALIAPI_04000	224308.BSU40840	0.0	872.0	COG0477@1|root,COG0477@2|Bacteria,COG2814@2|Bacteria,1UY0B@1239|Firmicutes,4HERK@91061|Bacilli,1ZH7J@1386|Bacillus	91061|Bacilli	EGP	Major facilitator superfamily	-	-	-	ko:K08369	-	-	-	-	ko00000,ko02000	2.A.1	-	-	MFS_1,Sugar_tr
PHALIAPI_04001	224308.BSU40850	8.62e-126	358.0	COG0110@1|root,COG0110@2|Bacteria,1TPKX@1239|Firmicutes,4HEHH@91061|Bacilli,1ZBSX@1386|Bacillus	91061|Bacilli	S	Bacterial transferase hexapeptide (six repeats)	vatD	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008374,GO:0016740,GO:0016746,GO:0016747,GO:0044424,GO:0044444,GO:0044464	2.3.1.28,2.3.1.79	ko:K00638,ko:K00661,ko:K18234	-	-	-	-	br01600,ko00000,ko01000,ko01504	-	-	-	Hexapep
PHALIAPI_04002	224308.BSU40860	1.4e-87	257.0	COG0346@1|root,COG0346@2|Bacteria,1V4NM@1239|Firmicutes,4HMRV@91061|Bacilli,1ZRTP@1386|Bacillus	91061|Bacilli	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	yyaH	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
PHALIAPI_04003	224308.BSU40870	7.68e-226	622.0	COG1609@1|root,COG1609@2|Bacteria,1TQSQ@1239|Firmicutes,4HBNR@91061|Bacilli,1ZC0J@1386|Bacillus	91061|Bacilli	K	Transcriptional regulator	ccpB	-	-	-	-	-	-	-	-	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
PHALIAPI_04004	224308.BSU40880	1.15e-184	513.0	COG0708@1|root,COG0708@2|Bacteria,1TPFB@1239|Firmicutes,4HAIU@91061|Bacilli,1ZAS3@1386|Bacillus	91061|Bacilli	L	exodeoxyribonuclease III	exoA	GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360	3.1.11.2	ko:K01142	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exo_endo_phos
PHALIAPI_04005	224308.BSU40890	4.25e-49	156.0	COG0238@1|root,COG0238@2|Bacteria,1V9XS@1239|Firmicutes,4HKCC@91061|Bacilli,1ZHUE@1386|Bacillus	91061|Bacilli	J	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit	rpsR	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02963	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S18
PHALIAPI_04006	224308.BSU40900	1.81e-103	301.0	COG0629@1|root,COG0629@2|Bacteria,1V3WT@1239|Firmicutes,4HH8I@91061|Bacilli,1ZFIJ@1386|Bacillus	91061|Bacilli	L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	ssb	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
PHALIAPI_04007	224308.BSU40910	2.9e-61	188.0	COG0360@1|root,COG0360@2|Bacteria,1VA18@1239|Firmicutes,4HKHD@91061|Bacilli,1ZGZ0@1386|Bacillus	91061|Bacilli	J	Binds together with S18 to 16S ribosomal RNA	rpsF	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904	-	ko:K02990	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S6
PHALIAPI_04008	224308.BSU40920	2.3e-255	701.0	COG0012@1|root,COG0012@2|Bacteria,1TPRK@1239|Firmicutes,4H9SQ@91061|Bacilli,1ZBUI@1386|Bacillus	91061|Bacilli	J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner	ychF	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464	-	ko:K06942	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1,YchF-GTPase_C
PHALIAPI_04009	224308.BSU40930	0.0	1326.0	COG0243@1|root,COG0243@2|Bacteria,1TPZG@1239|Firmicutes,4HTGY@91061|Bacilli,1ZQAS@1386|Bacillus	91061|Bacilli	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	yyaE	-	-	-	-	-	-	-	-	-	-	-	Molybdop_Fe4S4,Molybdopterin,Molydop_binding
PHALIAPI_04010	224308.BSU40939	7.41e-45	144.0	COG4481@1|root,COG4481@2|Bacteria,1VEQ7@1239|Firmicutes,4HNHU@91061|Bacilli,1ZIUV@1386|Bacillus	91061|Bacilli	S	protein conserved in bacteria	yyzM	-	-	-	-	-	-	-	-	-	-	-	DUF951
PHALIAPI_04011	224308.BSU40940	2.17e-226	625.0	COG3949@1|root,COG3949@2|Bacteria,1U1WV@1239|Firmicutes,4H9MI@91061|Bacilli,1ZQME@1386|Bacillus	91061|Bacilli	S	Membrane	yyaD	-	-	-	-	-	-	-	-	-	-	-	-
PHALIAPI_04012	224308.BSU40950	4.53e-145	409.0	2ADZG@1|root,313RY@2|Bacteria,1V6JT@1239|Firmicutes,4HH5B@91061|Bacilli,1ZCER@1386|Bacillus	91061|Bacilli	S	Sporulation protein YyaC	yyaC	-	-	-	-	-	-	-	-	-	-	-	DUF1256
PHALIAPI_04013	224308.BSU40960	1.61e-190	530.0	COG1475@1|root,COG1475@2|Bacteria,1TQ2B@1239|Firmicutes,4H9TB@91061|Bacilli,1ZBDT@1386|Bacillus	91061|Bacilli	K	Belongs to the ParB family	spo0J	GO:0005575,GO:0005622,GO:0005623,GO:0007059,GO:0008150,GO:0009295,GO:0009987,GO:0022603,GO:0042173,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0043937,GO:0043938,GO:0044424,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0065007	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	HTH_3,KorB,ParBc
PHALIAPI_04014	224308.BSU40970	4.79e-173	483.0	COG1192@1|root,COG1192@2|Bacteria,1TP8S@1239|Firmicutes,4HAYM@91061|Bacilli,1ZBXG@1386|Bacillus	91061|Bacilli	D	COG1192 ATPases involved in chromosome partitioning	soj	GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
PHALIAPI_04015	224308.BSU40980	1.13e-98	286.0	2DZPD@1|root,32VFE@2|Bacteria,1VAZH@1239|Firmicutes,4HMUD@91061|Bacilli,1ZIQ3@1386|Bacillus	91061|Bacilli	S	Bacterial PH domain	-	-	-	-	-	-	-	-	-	-	-	-	bPH_4
PHALIAPI_04016	224308.BSU40990	9e-193	536.0	COG1475@1|root,COG1475@2|Bacteria,1TP0I@1239|Firmicutes,4HAC6@91061|Bacilli,1ZCDV@1386|Bacillus	91061|Bacilli	D	Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage	noc	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
PHALIAPI_04017	224308.BSU41000	8.33e-167	466.0	COG0357@1|root,COG0357@2|Bacteria,1TPBT@1239|Firmicutes,4HAAZ@91061|Bacilli,1ZAWG@1386|Bacillus	91061|Bacilli	J	Specifically methylates the N7 position of guanine in position 535 of 16S rRNA	rsmG	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.170	ko:K03501	-	-	-	-	ko00000,ko01000,ko03009,ko03036	-	-	-	GidB
PHALIAPI_04018	224308.BSU41010	0.0	1226.0	COG0445@1|root,COG0445@2|Bacteria,1TQ4B@1239|Firmicutes,4HA6S@91061|Bacilli,1ZB67@1386|Bacillus	91061|Bacilli	D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34	gidA	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363	-	ko:K03495	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko03016,ko03036	-	-	-	GIDA,GIDA_assoc
PHALIAPI_04019	224308.BSU41020	0.0	868.0	COG0486@1|root,COG0486@2|Bacteria,1TPJF@1239|Firmicutes,4HA06@91061|Bacilli,1ZBTZ@1386|Bacillus	91061|Bacilli	S	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34	mnmE	-	-	ko:K03650	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko01000,ko03016	-	-	-	MMR_HSR1,MnmE_helical,TrmE_N
PHALIAPI_04020	224308.BSU41030	7.47e-141	398.0	COG1847@1|root,COG1847@2|Bacteria,1V3IN@1239|Firmicutes,4HHHU@91061|Bacilli,1ZDGU@1386|Bacillus	91061|Bacilli	S	single-stranded nucleic acid binding R3H	jag	-	-	ko:K06346	-	-	-	-	ko00000	-	-	-	Jag_N,KH_4,R3H
PHALIAPI_04021	224308.BSU41040	9.29e-179	498.0	COG0706@1|root,COG0706@2|Bacteria,1TQ0J@1239|Firmicutes,4HB3J@91061|Bacilli,1ZBYD@1386|Bacillus	91061|Bacilli	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins	yidC	GO:0005575,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0030154,GO:0030435,GO:0032502,GO:0043934,GO:0048646,GO:0048856,GO:0048869	-	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9	-	-	60KD_IMP
PHALIAPI_04022	224308.BSU41050	5.7e-71	214.0	COG0594@1|root,COG0594@2|Bacteria,1VA78@1239|Firmicutes,4HKG6@91061|Bacilli,1ZHUH@1386|Bacillus	91061|Bacilli	J	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme	rnpA	GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0031123,GO:0031404,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904	3.1.26.5	ko:K03536	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ribonuclease_P
## 3771 queries scanned
## Total time (seconds): 7.658459663391113
## Rate: 492.40 q/s