Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	-	-	Homo sapiens	0	4	0	0	4.00
2	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	-	-	Homo sapiens	296	4	0	0	4.00
3	GCA_039913155.1	Bifidobacterium bifidum	F6_hBSD2780061687b_210117	SAMN31321403	2021-01-17	USA	Homo sapiens	914	3	0	0	3.00
4	GCA_028202185.1	Bifidobacterium bifidum	BSD2780061688st1_D1_BSD2780061688b_171218	SAMN31321359	2017-12-18	USA	Homo sapiens	915	3	0	0	3.00
5	GCA_028202455.1	Bifidobacterium bifidum	H2_hBSD2780061687b_210117	SAMN31321404	2021-01-17	USA	Homo sapiens	915	3	0	0	3.00
6	GCA_039913235.1	Bifidobacterium bifidum	B7_hBSD2780061687b_210117	SAMN31321398	2021-01-17	USA	Homo sapiens	915	3	0	0	3.00
7	GCA_028202425.1	Bifidobacterium bifidum	A4_hBSD2780061687b_210117	SAMN31321396	2021-01-17	USA	Homo sapiens	916	3	0	0	3.00
8	GCA_028202515.1	Bifidobacterium bifidum	F11_hBSD2780061687b_210117	SAMN31321401	2021-01-17	USA	Homo sapiens	916	3	0	0	3.00
9	GCA_028202535.1	Bifidobacterium bifidum	E4_hBSD2780061687b_210117	SAMN31321400	2021-01-17	USA	Homo sapiens	916	3	0	0	3.00
10	GCA_028202115.1	Bifidobacterium bifidum	BSD2780061688st1_G1_BSD2780061688b_171218	SAMN31321360	2017-12-18	USA	Homo sapiens	917	3	0	0	3.00
11	GCA_028202435.1	Bifidobacterium bifidum	F3_hBSD2780061687b_210117	SAMN31321402	2021-01-17	USA	Homo sapiens	917	3	0	0	3.00
12	GCA_028203515.1	Bifidobacterium bifidum	A2_hBSD2780061687b_210117	SAMN31321395	2021-01-17	USA	Homo sapiens	917	3	0	0	3.00
13	GCA_028203545.1	Bifidobacterium bifidum	B3_hBSD2780061687b_210117	SAMN31321397	2021-01-17	USA	Homo sapiens	919	3	0	0	3.00
14	GCA_028203645.1	Bifidobacterium bifidum	E2_hBSD2780061687b_210117	SAMN31321399	2021-01-17	USA	Homo sapiens	925	3	0	0	3.00
15	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	2008-03-17	India: Unique Biotech Limited, Hyderabad	Homo sapiens	1005	2	0	0	2.00
16	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	-	SAMD00061040	-	-	-	1006	2	0	0	2.00
17	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	2020-07-20	-	-	1006	2	0	0	2.00
18	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	2011-11	China: Neimenggu	Homo sapiens	1006	2	0	0	2.00
19	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	-	-	1006	2	0	0	2.00
20	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	-	-	Homo sapiens	1007	2	0	0	2.00
21	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	-	-	Homo sapiens	1007	2	0	0	2.00
22	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	2016-04-25	USA	Homo sapiens	1010	2	0	0	2.00
23	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	1977	Russia: Moscow	Homo sapiens	1019	1	0	0	1.00
24	GCA_049204775.1	Bifidobacterium bifidum	IATA148	SAMN45053989	2022	Spain:Valencia	Homo sapiens	1021	2	0	0	2.00
25	GCA_040094955.1	Bifidobacterium bifidum	CLA-AA-H198	SAMN40631356	2020-07-20	Germany:Aachen	Homo sapiens	1026	2	0	0	2.00
26	GCA_028201935.1	Bifidobacterium bifidum	1025st1_E4_1025SCRN_200924	SAMN31321351	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
27	GCA_028202225.1	Bifidobacterium bifidum	1025st1_F12_1025SCRN_200924	SAMN31321352	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
28	GCA_028202255.1	Bifidobacterium bifidum	1025st1_B5_1025SCRN_200924	SAMN31321348	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
29	GCA_028202265.1	Bifidobacterium bifidum	1025st1_D2_1025SCRN_200924	SAMN31321350	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
30	GCA_028202305.1	Bifidobacterium bifidum	1025st1_A12_1025SCRN_200924	SAMN31321347	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
31	GCA_039913395.1	Bifidobacterium bifidum	1025st1_C5_1025SCRN_200924	SAMN31321349	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
32	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	-	-	Homo sapiens	1030	2	0	0	2.00
33	GCA_028201965.1	Bifidobacterium bifidum	2226st1_E4_2226SCRN_200925	SAMN31321353	2020-09-25	USA	Homo sapiens	1030	2	0	0	2.00
34	GCA_039913355.1	Bifidobacterium bifidum	2226st1_G9_2226SCRN_200925	SAMN31321354	2020-09-25	USA	Homo sapiens	1031	2	0	0	2.00
35	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	-	-	Homo sapiens	1035	3	0	0	3.00
36	GCA_028202055.1	Bifidobacterium bifidum	D31st1_E7_D31t1_170403	SAMN31321363	2017-04-03	USA	Homo sapiens	1036	2	0	0	2.00
37	GCA_028202075.1	Bifidobacterium bifidum	D31st1_A3_D31t1_170403	SAMN31321361	2017-04-03	USA	Homo sapiens	1036	2	0	0	2.00
38	GCA_028202095.1	Bifidobacterium bifidum	D31st1_B4_D31t1_170403	SAMN31321362	2017-04-03	USA	Homo sapiens	1037	2	0	0	2.00
39	GCA_028202395.1	Bifidobacterium bifidum	J1101312st1_E10_J1101312_190322	SAMN31321382	2019-03-22	USA	Homo sapiens	1037	2	0	0	2.00
40	GCA_028202415.1	Bifidobacterium bifidum	J1101312st1_C7_J1101312_190322	SAMN31321381	2019-03-22	USA	Homo sapiens	1037	2	0	0	2.00
41	GCA_028203675.1	Bifidobacterium bifidum	J1101312st1_H2_J1101312_190322	SAMN31321384	2019-03-22	USA	Homo sapiens	1037	2	0	0	2.00
42	GCA_028203695.1	Bifidobacterium bifidum	J1101312st1_E3_J1101312_190322	SAMN31321383	2019-03-22	USA	Homo sapiens	1037	2	0	0	2.00
43	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	2020-08-14	USA	Homo sapiens	1038	2	0	0	2.00
44	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	2020-08-14	USA	Homo sapiens	1038	2	0	0	2.00
45	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	2017-09-25	USA	Homo sapiens	1039	2	0	0	2.00
46	GCA_002076105.1	Bifidobacterium bifidum	1887B	SAMN06621707	-	Italy	Homo sapiens	1040	2	0	0	2.00
47	GCA_009078055.1	Bifidobacterium bifidum	BIOML-A11	SAMN11944601	2015-12-09	USA:Boston	Homo sapiens	1040	2	0	0	2.00
48	GCA_009078115.1	Bifidobacterium bifidum	BIOML-A10	SAMN11944600	2015-12-09	USA:Boston	Homo sapiens	1040	2	0	0	2.00
49	GCA_009159495.1	Bifidobacterium bifidum	BIOML-A24	SAMN11944614	2015-12-09	USA:Boston	Homo sapiens	1040	2	1	0	2.24
50	GCA_009159505.1	Bifidobacterium bifidum	BIOML-A20	SAMN11944610	2015-12-09	USA:Boston	Homo sapiens	1040	2	0	0	2.00
51	GCA_009159555.1	Bifidobacterium bifidum	BIOML-A19	SAMN11944609	2015-12-09	USA:Boston	Homo sapiens	1040	3	1	0	3.16
52	GCA_009160825.1	Bifidobacterium bifidum	BIOML-A25	SAMN11944615	2015-12-09	USA:Boston	Homo sapiens	1040	3	0	0	3.00
53	GCA_009160885.1	Bifidobacterium bifidum	BIOML-A14	SAMN11944604	2015-12-09	USA:Boston	Homo sapiens	1040	2	0	0	2.00
54	GCA_009160905.1	Bifidobacterium bifidum	BIOML-A12	SAMN11944602	2015-12-09	USA:Boston	Homo sapiens	1040	2	0	0	2.00
55	GCA_009160915.1	Bifidobacterium bifidum	BIOML-A15	SAMN11944605	2015-12-09	USA:Boston	Homo sapiens	1040	2	0	0	2.00
56	GCA_009160945.1	Bifidobacterium bifidum	BIOML-A13	SAMN11944603	2015-12-09	USA:Boston	Homo sapiens	1040	2	0	0	2.00
57	GCA_009159095.1	Bifidobacterium bifidum	BIOML-A21	SAMN11944611	2015-12-09	USA:Boston	Homo sapiens	1041	2	0	0	2.00
58	GCA_020892075.1	Bifidobacterium bifidum	-	SAMD00324644	-	-	-	1041	3	0	0	3.00
59	GCA_009160845.1	Bifidobacterium bifidum	BIOML-A17	SAMN11944607	2015-12-09	USA:Boston	Homo sapiens	1042	2	0	0	2.00
60	GCA_009077955.1	Bifidobacterium bifidum	BIOML-A7	SAMN11944597	2015-03-31	USA:Boston	Homo sapiens	1044	3	0	0	3.00
61	GCA_009078005.1	Bifidobacterium bifidum	BIOML-A5	SAMN11944595	2015-03-31	USA:Boston	Homo sapiens	1044	3	0	0	3.00
62	GCA_009078065.1	Bifidobacterium bifidum	BIOML-A3	SAMN11944593	2015-03-31	USA:Boston	Homo sapiens	1044	3	0	0	3.00
63	GCA_009078095.1	Bifidobacterium bifidum	BIOML-A9	SAMN11944599	2015-03-31	USA:Boston	Homo sapiens	1044	3	0	0	3.00
64	GCA_045635495.1	Bifidobacterium bifidum	CGMCC No.29545	SAMN44616490	2023-05-01	China:Hangzhou	Homo sapiens	1044	2	0	0	2.00
65	GCA_046763285.1	Bifidobacterium bifidum	LHP007	SAMN46218889	2021	United Kingdom: Norwich	Homo sapiens	1044	2	0	0	2.00
66	GCA_009075765.1	Bifidobacterium bifidum	BIOML-A2	SAMN11944592	2015-03-31	USA:Boston	Homo sapiens	1045	3	0	0	3.00
67	GCA_022133625.1	Bifidobacterium bifidum	DFI.7.59	SAMN24726072	-	USA:Chicago	Homo sapiens	1045	2	0	0	2.00
68	GCA_004167365.1	Bifidobacterium bifidum	ca_0067	SAMN10239585	2015-01	USA: Cambridge	Homo sapiens	1046	3	0	0	3.00
69	GCA_009075785.1	Bifidobacterium bifidum	BIOML-A1	SAMN11944591	2015-03-31	USA:Boston	Homo sapiens	1046	3	0	0	3.00
70	GCA_009077915.1	Bifidobacterium bifidum	BIOML-A8	SAMN11944598	2015-03-31	USA:Boston	Homo sapiens	1046	3	0	0	3.00
71	GCA_009078015.1	Bifidobacterium bifidum	BIOML-A4	SAMN11944594	2015-03-31	USA:Boston	Homo sapiens	1046	3	0	0	3.00
72	GCA_022134905.2	Bifidobacterium bifidum	DFI.7.51	SAMN24726067	-	USA:Chicago	Homo sapiens	1046	2	0	0	2.00
73	GCA_025506295.1	Bifidobacterium bifidum	20	SAMN12565454	2019-04-01	United Kingdom	Homo sapiens	1046	2	0	0	2.00
74	GCA_009077975.1	Bifidobacterium bifidum	BIOML-A6	SAMN11944596	2015-03-31	USA:Boston	Homo sapiens	1047	3	0	0	3.00
75	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	-	-	1047	2	0	0	2.00
76	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	2020-02-17	USA	Homo sapiens	1048	2	0	0	2.00
77	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	2020-02-17	USA	Homo sapiens	1048	2	0	0	2.00
78	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	2016-11-14	USA	Homo sapiens	1048	2	0	0	2.00
79	GCA_028202155.1	Bifidobacterium bifidum	1001283st1_G4_1001283B150217_161031	SAMN31321346	2016-10-31	USA	Homo sapiens	1048	2	0	0	2.00
80	GCA_028202165.1	Bifidobacterium bifidum	1001283st1_F3_1001283B150210_160208	SAMN31321344	2016-02-08	USA	Homo sapiens	1048	2	0	0	2.00
81	GCA_028202215.1	Bifidobacterium bifidum	1001283st1_F5_1001283B150209_150212	SAMN31321345	2015-02-12	USA	Homo sapiens	1048	2	0	0	2.00
82	GCA_028202335.1	Bifidobacterium bifidum	1001283st1_A1_1001285H_161024	SAMN31321336	2016-10-24	USA	Homo sapiens	1048	3	0	0	3.00
83	GCA_028202355.1	Bifidobacterium bifidum	1001283st1_E8_1001285I_161205	SAMN31321342	2016-12-05	USA	Homo sapiens	1048	3	0	0	3.00
84	GCA_028202365.1	Bifidobacterium bifidum	1001283st1_B11_1001285I_161205	SAMN31321337	2016-12-05	USA	Homo sapiens	1048	3	0	0	3.00
85	GCA_028202575.1	Bifidobacterium bifidum	1001283st1_E8_1001283B150210_160208	SAMN31321341	2016-02-08	USA	Homo sapiens	1048	2	0	0	2.00
86	GCA_028202605.1	Bifidobacterium bifidum	1001283st1_D6_1001283B150209_150212	SAMN31321340	2015-02-12	USA	Homo sapiens	1048	2	0	0	2.00
87	GCA_028202725.1	Bifidobacterium bifidum	1001283st1_C8_1001283B150304_161114	SAMN31321339	2016-11-14	USA	Homo sapiens	1048	2	0	0	2.00
88	GCA_028203615.1	Bifidobacterium bifidum	A12_h1001283B150217_200217	SAMN31321372	2020-02-17	USA	Homo sapiens	1048	2	0	0	2.00
89	GCA_028203745.1	Bifidobacterium bifidum	G8_h1001283B150217_200217	SAMN31321379	2020-02-17	USA	Homo sapiens	1048	2	0	0	2.00
90	GCA_028203775.1	Bifidobacterium bifidum	F11_h1001283B150217_200217	SAMN31321378	2020-02-17	USA	Homo sapiens	1048	2	0	0	2.00
91	GCA_028203875.1	Bifidobacterium bifidum	H3_h1001283B150217_200217	SAMN31321371	2020-02-17	USA	Homo sapiens	1048	2	0	0	2.00
92	GCA_028203895.1	Bifidobacterium bifidum	H2_h1001283B150217_200217	SAMN31321370	2020-02-17	USA	Homo sapiens	1048	2	0	0	2.00
93	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	2020-02-17	USA	Homo sapiens	1049	2	0	0	2.00
94	GCA_028202295.1	Bifidobacterium bifidum	1001283st1_C1_1001283B150225_161107	SAMN31321338	2016-11-07	USA	Homo sapiens	1049	2	0	0	2.00
95	GCA_028203705.1	Bifidobacterium bifidum	G10_h1001283B150217_200217	SAMN31321380	2020-02-17	USA	Homo sapiens	1049	2	0	0	2.00
96	GCA_028203735.1	Bifidobacterium bifidum	F6_h1001283B150217_200217	SAMN31321377	2020-02-17	USA	Homo sapiens	1049	2	0	0	2.00
97	GCA_028203795.1	Bifidobacterium bifidum	C4_h1001283B150217_200217	SAMN31321375	2020-02-17	USA	Homo sapiens	1049	2	0	0	2.00
98	GCA_028203815.1	Bifidobacterium bifidum	F5_h1001283B150217_200217	SAMN31321376	2020-02-17	USA	Homo sapiens	1049	2	0	0	2.00
99	GCA_039913365.1	Bifidobacterium bifidum	C1_h1001283B150217_200217	SAMN31321374	2020-02-17	USA	Homo sapiens	1049	3	0	1	3.16
100	GCA_003465425.1	Bifidobacterium bifidum	AF11-25B	SAMN09734209	2013-10-01	China: Shenzhen	Homo sapiens	1050	4	0	0	4.00