GCA_001044405.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDNILNHJJ_9 (original name was: gnl|Prokka|DNILNHJJ_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	1	8,936

gnlProkkaDNILNHJJ_14 (original name was: gnl|Prokka|DNILNHJJ_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	T3PKS	1	30,302

gnlProkkaDNILNHJJ_45 (original name was: gnl|Prokka|DNILNHJJ_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	RiPP-like	1	7,601

Region	Type	From	To	Similarity
Region 9.1	RiPP-like	1	8,936
Region 14.1	T3PKS	1	30,302
Region 45.1	RiPP-like	1	7,601

No secondary metabolite regions were found in these records:: gnlProkkaDNILNHJJ_1 (original name was: gnl|Prokka|DNILNHJJ_1); gnlProkkaDNILNHJJ_2 (original name was: gnl|Prokka|DNILNHJJ_2); gnlProkkaDNILNHJJ_3 (original name was: gnl|Prokka|DNILNHJJ_3); gnlProkkaDNILNHJJ_4 (original name was: gnl|Prokka|DNILNHJJ_4); gnlProkkaDNILNHJJ_5 (original name was: gnl|Prokka|DNILNHJJ_5); gnlProkkaDNILNHJJ_6 (original name was: gnl|Prokka|DNILNHJJ_6); gnlProkkaDNILNHJJ_7 (original name was: gnl|Prokka|DNILNHJJ_7); gnlProkkaDNILNHJJ_8 (original name was: gnl|Prokka|DNILNHJJ_8); gnlProkkaDNILNHJJ_10 (original name was: gnl|Prokka|DNILNHJJ_10); gnlProkkaDNILNHJJ_11 (original name was: gnl|Prokka|DNILNHJJ_11); gnlProkkaDNILNHJJ_12 (original name was: gnl|Prokka|DNILNHJJ_12); gnlProkkaDNILNHJJ_13 (original name was: gnl|Prokka|DNILNHJJ_13); gnlProkkaDNILNHJJ_15 (original name was: gnl|Prokka|DNILNHJJ_15); gnlProkkaDNILNHJJ_16 (original name was: gnl|Prokka|DNILNHJJ_16); gnlProkkaDNILNHJJ_17 (original name was: gnl|Prokka|DNILNHJJ_17); gnlProkkaDNILNHJJ_18 (original name was: gnl|Prokka|DNILNHJJ_18); gnlProkkaDNILNHJJ_19 (original name was: gnl|Prokka|DNILNHJJ_19); gnlProkkaDNILNHJJ_20 (original name was: gnl|Prokka|DNILNHJJ_20); gnlProkkaDNILNHJJ_21 (original name was: gnl|Prokka|DNILNHJJ_21); gnlProkkaDNILNHJJ_22 (original name was: gnl|Prokka|DNILNHJJ_22); gnlProkkaDNILNHJJ_23 (original name was: gnl|Prokka|DNILNHJJ_23); gnlProkkaDNILNHJJ_24 (original name was: gnl|Prokka|DNILNHJJ_24); gnlProkkaDNILNHJJ_25 (original name was: gnl|Prokka|DNILNHJJ_25); gnlProkkaDNILNHJJ_26 (original name was: gnl|Prokka|DNILNHJJ_26); gnlProkkaDNILNHJJ_27 (original name was: gnl|Prokka|DNILNHJJ_27); gnlProkkaDNILNHJJ_28 (original name was: gnl|Prokka|DNILNHJJ_28); gnlProkkaDNILNHJJ_29 (original name was: gnl|Prokka|DNILNHJJ_29); gnlProkkaDNILNHJJ_30 (original name was: gnl|Prokka|DNILNHJJ_30); gnlProkkaDNILNHJJ_31 (original name was: gnl|Prokka|DNILNHJJ_31); gnlProkkaDNILNHJJ_32 (original name was: gnl|Prokka|DNILNHJJ_32); gnlProkkaDNILNHJJ_33 (original name was: gnl|Prokka|DNILNHJJ_33); gnlProkkaDNILNHJJ_34 (original name was: gnl|Prokka|DNILNHJJ_34); gnlProkkaDNILNHJJ_35 (original name was: gnl|Prokka|DNILNHJJ_35); gnlProkkaDNILNHJJ_36 (original name was: gnl|Prokka|DNILNHJJ_36); gnlProkkaDNILNHJJ_37 (original name was: gnl|Prokka|DNILNHJJ_37); gnlProkkaDNILNHJJ_38 (original name was: gnl|Prokka|DNILNHJJ_38); gnlProkkaDNILNHJJ_39 (original name was: gnl|Prokka|DNILNHJJ_39); gnlProkkaDNILNHJJ_40 (original name was: gnl|Prokka|DNILNHJJ_40); gnlProkkaDNILNHJJ_41 (original name was: gnl|Prokka|DNILNHJJ_41); gnlProkkaDNILNHJJ_42 (original name was: gnl|Prokka|DNILNHJJ_42); gnlProkkaDNILNHJJ_43 (original name was: gnl|Prokka|DNILNHJJ_43); gnlProkkaDNILNHJJ_44 (original name was: gnl|Prokka|DNILNHJJ_44); gnlProkkaDNILNHJJ_46 (original name was: gnl|Prokka|DNILNHJJ_46); gnlProkkaDNILNHJJ_47 (original name was: gnl|Prokka|DNILNHJJ_47); gnlProkkaDNILNHJJ_48 (original name was: gnl|Prokka|DNILNHJJ_48); gnlProkkaDNILNHJJ_49 (original name was: gnl|Prokka|DNILNHJJ_49); gnlProkkaDNILNHJJ_50 (original name was: gnl|Prokka|DNILNHJJ_50); gnlProkkaDNILNHJJ_51 (original name was: gnl|Prokka|DNILNHJJ_51); gnlProkkaDNILNHJJ_52 (original name was: gnl|Prokka|DNILNHJJ_52); gnlProkkaDNILNHJJ_53 (original name was: gnl|Prokka|DNILNHJJ_53); gnlProkkaDNILNHJJ_54 (original name was: gnl|Prokka|DNILNHJJ_54); gnlProkkaDNILNHJJ_55 (original name was: gnl|Prokka|DNILNHJJ_55); gnlProkkaDNILNHJJ_56 (original name was: gnl|Prokka|DNILNHJJ_56); gnlProkkaDNILNHJJ_57 (original name was: gnl|Prokka|DNILNHJJ_57); gnlProkkaDNILNHJJ_58 (original name was: gnl|Prokka|DNILNHJJ_58); gnlProkkaDNILNHJJ_59 (original name was: gnl|Prokka|DNILNHJJ_59); gnlProkkaDNILNHJJ_60 (original name was: gnl|Prokka|DNILNHJJ_60); gnlProkkaDNILNHJJ_61 (original name was: gnl|Prokka|DNILNHJJ_61); gnlProkkaDNILNHJJ_62 (original name was: gnl|Prokka|DNILNHJJ_62); gnlProkkaDNILNHJJ_63 (original name was: gnl|Prokka|DNILNHJJ_63); gnlProkkaDNILNHJJ_64 (original name was: gnl|Prokka|DNILNHJJ_64); gnlProkkaDNILNHJJ_65 (original name was: gnl|Prokka|DNILNHJJ_65); gnlProkkaDNILNHJJ_66 (original name was: gnl|Prokka|DNILNHJJ_66); gnlProkkaDNILNHJJ_67 (original name was: gnl|Prokka|DNILNHJJ_67)

Compact view

gnlProkkaDNILNHJJ_9 - Region 1 - RiPP-like

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Location: 1 - 8,936 nt. (total: 8,936 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDNILNHJJ_14 - Region 1 - T3PKS

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Location: 1 - 30,302 nt. (total: 30,302 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDNILNHJJ_45 - Region 1 - RiPP-like

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Download region SVG

Location: 1 - 7,601 nt. (total: 7,601 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.