Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_001264105.1	Bifidobacterium breve MCC 1340	MCC 1340	SAMN03978803	-	Japan	Homo sapiens	0	3	0	0	3.00
2	GCA_001263855.1	Bifidobacterium breve MCC 1114	MCC 1114	SAMN03978798	-	Japan	Homo sapiens	1077	1	0	0	1.00
3	GCA_001264045.1	Bifidobacterium breve MCC 0121	MCC 0121	SAMN03978796	-	Japan	Homo sapiens	1087	2	0	0	2.00
4	GCA_001263915.1	Bifidobacterium breve MCC 1128	MCC 1128	SAMN03978799	-	Japan	Homo sapiens	1092	1	0	0	1.00
5	GCA_002076075.1	Bifidobacterium breve	1889B	SAMN06621709	-	Italy	Homo sapiens	1106	1	0	0	1.00
6	GCA_000569055.1	Bifidobacterium breve 689b	689b	SAMN03081482	-	-	-	1109	1	0	0	1.00
7	GCA_000569075.1	Bifidobacterium breve S27	S27	SAMN03081483	-	-	-	1112	1	0	0	1.00
8	GCA_001264095.1	Bifidobacterium breve MCC 1094	MCC 1094	SAMN03978802	-	Japan	Homo sapiens	1112	2	0	0	2.00
9	GCA_000411435.1	Bifidobacterium breve HPH0326	HPH0326	SAMN02596976	-	-	-	1113	1	0	0	1.00
10	GCA_001263845.1	Bifidobacterium breve MCC 0476	MCC 0476	SAMN03978797	-	Japan	Homo sapiens	1113	2	0	0	2.00
11	GCA_000568975.1	Bifidobacterium breve JCM 7017	JCM 7017	SAMN03081479	-	-	-	1115	1	0	0	1.00
12	GCA_001264135.1	Bifidobacterium breve MCC 1454	MCC 1454	SAMN03978804	-	Japan	Homo sapiens	1115	1	0	0	1.00
13	GCA_002838305.1	Bifidobacterium breve	NRBB11	SAMN06827081	2014-10-01	Netherlands	Homo sapiens	1115	1	0	0	1.00
14	GCA_028201755.1	Bifidobacterium breve	J1100826st1_H2_J1100826_190719	SAMN31321432	2019-07-19	USA	Homo sapiens	1115	1	0	0	1.00
15	GCA_028201795.1	Bifidobacterium breve	J1100826st1_H11_J1100826_190719	SAMN31321431	2019-07-19	USA	Homo sapiens	1115	1	0	0	1.00
16	GCA_028203305.1	Bifidobacterium breve	J1100826st1_F9_J1100826_190719	SAMN31321430	2019-07-19	USA	Homo sapiens	1115	1	0	0	1.00
17	GCA_028203435.1	Bifidobacterium breve	J1100826st1_F12_J1100826_190719	SAMN31321429	2019-07-19	USA	Homo sapiens	1115	1	0	0	1.00
18	GCA_049204755.1	Bifidobacterium breve	IATA153	SAMN45053990	2022	Spain:Valencia	Homo sapiens	1119	5	0	0	5.00
19	GCA_000213865.1	Bifidobacterium breve ACS-071-V-Sch8b	ACS-071-V-Sch8b	SAMN00100758	-	-	Homo sapiens	1121	2	0	0	2.00
20	GCA_002838385.1	Bifidobacterium breve	NRBB52	SAMN06827097	2014-10-01	Netherlands	Homo sapiens	1122	1	0	0	1.00
21	GCA_002838485.1	Bifidobacterium breve	215W447a	SAMN06829004	2014-10-01	Ireland	Homo sapiens	1122	1	0	0	1.00
22	GCA_047301025.1	Bifidobacterium breve	JKL2022	SAMN30403323	2008-02-22	South Korea: Anseong City	-	1124	2	0	0	2.00
23	GCA_028203455.1	Bifidobacterium breve	1001254st1_D4_1001254J_160919	SAMN31321418	2016-09-19	USA	Homo sapiens	1125	3	0	0	3.00
24	GCA_028203465.1	Bifidobacterium breve	1001254st1_B10_1001254J_160919	SAMN31321417	2016-09-19	USA	Homo sapiens	1125	3	0	0	3.00
25	GCA_002838345.1	Bifidobacterium breve	NRBB57	SAMN06827912	2014-10-01	Netherlands	Homo sapiens	1126	2	0	0	2.00
26	GCA_016648985.1	Bifidobacterium breve	M1D	SAMN16287678	2019	Italy	Homo sapiens	1126	4	0	0	4.00
27	GCA_002838505.1	Bifidobacterium breve	DRBB28	SAMN06827976	2014-10-01	Netherlands	Homo sapiens	1127	3	0	0	3.00
28	GCA_002838585.1	Bifidobacterium breve	CNCM I-4321	SAMN06827913	2014-10-01	Netherlands	Homo sapiens	1127	4	0	0	4.00
29	GCA_002838725.1	Bifidobacterium breve	DRBB30	SAMN07160979	2014-10-01	Netherlands	Homo sapiens	1127	4	0	0	4.00
30	GCA_028201775.1	Bifidobacterium breve	J1101312st1_E4_J1101312_190322	SAMN31321433	2019-03-22	USA	Homo sapiens	1127	1	0	0	1.00
31	GCA_028203415.1	Bifidobacterium breve	J1101312st1_H6_J1101312_190322	SAMN31321434	2019-03-22	USA	Homo sapiens	1127	1	0	0	1.00
32	GCA_039912975.1	Bifidobacterium breve	2217st1_C9_2217SCRN_200827	SAMN31321424	2020-08-27	USA	Homo sapiens	1127	1	0	0	1.00
33	GCA_902651995.1	Bifidobacterium breve	-	SAMEA6160251	-	-	-	1127	2	0	0	2.00
34	GCA_001264035.1	Bifidobacterium breve MCC 0305	MCC 0305	SAMN03978801	-	Japan	Homo sapiens	1128	2	0	0	2.00
35	GCA_002914865.1	Bifidobacterium breve	BB02	SAMN07187787	2017	Italy	-	1128	2	0	0	2.00
36	GCA_028201765.1	Bifidobacterium breve	1001274st1_G4_1001274B_151102	SAMN31321419	2015-11-02	USA	Homo sapiens	1128	2	0	0	2.00
37	GCA_028203585.1	Bifidobacterium breve	2217st1_B10_2217SCRN_200827	SAMN31321423	2020-08-27	USA	Homo sapiens	1128	1	0	0	1.00
38	GCA_030219005.1	Bifidobacterium breve	UMB0002	SAMN34996433	-	USA: Maywood, IL	Homo sapiens	1128	2	1	1	2.45
39	GCA_001281425.1	Bifidobacterium breve	BR3	SAMN03271681	2001-08-13	Korea	Homo sapiens	1129	3	0	0	3.00
40	GCA_002075865.1	Bifidobacterium breve	1900B	SAMN06621718	-	Italy	Homo sapiens	1129	2	0	0	2.00
41	GCA_016648955.1	Bifidobacterium breve	PRL2020	SAMN16287677	2018	Italy	Homo sapiens	1129	4	0	0	4.00
42	GCA_039912955.1	Bifidobacterium breve	1001285st1_E7_1001285H_161024	SAMN31321421	2016-10-24	USA	Homo sapiens	1129	2	0	0	2.00
43	GCA_049205255.1	Bifidobacterium breve	IATA084	SAMN45053963	2022	Spain:Valencia	Homo sapiens	1129	1	0	0	1.00
44	GCA_002076055.1	Bifidobacterium breve	1891B	SAMN06621711	-	Italy	Homo sapiens	1130	4	0	0	4.00
45	GCA_028201915.1	Bifidobacterium breve	1001274st1_H8_1001274B_151102	SAMN31321420	2015-11-02	USA	Homo sapiens	1130	2	0	0	2.00
46	GCA_049191355.1	Bifidobacterium breve	IATA131	SAMN45053980	2022	Spain:Valencia	Homo sapiens	1130	3	0	0	3.00
47	GCA_002838365.1	Bifidobacterium breve	NRBB50	SAMN06827094	2014-10-01	Netherlands	Homo sapiens	1132	1	0	0	1.00
48	GCA_001189355.1	Bifidobacterium breve	BBRI4	SAMN03777307	2013-11-26	Italy: Trento	Homo sapiens	1133	3	0	0	3.00
49	GCA_029723715.1	Bifidobacterium breve	LH_989	SAMN24838599	2017	United Kingdom	Homo sapiens	1133	1	0	0	1.00
50	GCA_002838545.1	Bifidobacterium breve	082W48	SAMN06828932	2014-10-01	Ireland	Homo sapiens	1134	1	0	0	1.00
51	GCA_049191465.1	Bifidobacterium breve	IATA048	SAMN45053954	2022	Spain:Valencia	Homo sapiens	1134	4	0	0	4.00
52	GCA_049205315.1	Bifidobacterium breve	IATA077	SAMN45053959	2022	Spain:Valencia	Homo sapiens	1134	4	0	0	4.00
53	GCA_000247755.2	Bifidobacterium breve CECT 7263	CECT 7263	SAMN02471362	2007-09	Spain	Homo sapiens	1135	4	0	0	4.00
54	GCA_002027265.1	Bifidobacterium breve	CECT7263	SAMN06473336	-	Spain	Homo sapiens	1135	4	0	0	4.00
55	GCA_002838465.1	Bifidobacterium breve	017W439	SAMN06828931	2014-10-01	Ireland	Homo sapiens	1135	1	0	0	1.00
56	GCA_027212565.1	Bifidobacterium breve	SDS-962-Irr	SAMN32244238	2019-02-11	Canada: Vancouver	Homo sapiens	1135	1	0	0	1.00
57	GCA_027212815.1	Bifidobacterium breve	SDS-964-W-Irr	SAMN32244259	2019-02-26	Canada: Vancouver	Homo sapiens	1135	1	0	0	1.00
58	GCA_040367695.1	Bifidobacterium breve	-	SAMD00644048	-	-	-	1135	1	0	0	1.00
59	GCA_902505445.1	Bifidobacterium breve	-	SAMEA4838173	2014-08-08	United Kingdom	-	1135	1	0	0	1.00
60	GCA_902505485.1	Bifidobacterium breve	-	SAMEA4838172	2014-08-08	United Kingdom	-	1135	1	0	0	1.00
61	GCA_029011725.1	Bifidobacterium breve	VSI11	SAMN33275438	2020-11-20	USA: Houston, TX	Homo sapiens	1136	1	0	0	1.00
62	GCA_000568955.2	Bifidobacterium breve 12L	12L	SAMN03081478	-	-	-	1137	2	0	0	2.00
63	GCA_000569035.1	Bifidobacterium breve NCFB 2258	NCFB 2258	SAMN03081481	-	-	-	1137	1	0	0	1.00
64	GCA_002838285.1	Bifidobacterium breve	NRBB04	SAMN06827050	2014-10-01	Netherlands	Homo sapiens	1137	1	0	0	1.00
65	GCA_024665435.1	Bifidobacterium breve	BIF195	SAMN29862206	-	-	Homo sapiens	1137	1	0	0	1.00
66	GCA_030216945.1	Bifidobacterium breve	UMB5641	SAMN34996542	2015-01	USA: Maywood, IL	Homo sapiens	1137	2	1	0	2.24
67	GCA_900102865.1	Bifidobacterium breve	RP2	SAMN05216468	-	-	-	1137	3	0	0	3.00
68	GCA_000568895.1	Bifidobacterium breve 2L	2L	SAMN02951890	-	Italy: Parma	Homo sapiens	1138	2	0	0	2.00
69	GCA_002838405.1	Bifidobacterium breve	NRBB51	SAMN06827096	2014-10-01	Netherlands	Homo sapiens	1138	4	0	0	4.00
70	GCA_003370195.1	Bifidobacterium breve	30-1	SAMN07189837	2012	Canada: Toronto	Homo sapiens	1138	1	0	0	1.00
71	GCA_049191365.1	Bifidobacterium breve	IATA136	SAMN45053982	2022	Spain:Valencia	Homo sapiens	1138	3	0	0	3.00
72	GCA_001990225.1	Bifidobacterium breve	LMC520	SAMN06240351	1900-01-01	-	-	1139	2	0	0	2.00
73	GCA_002838265.1	Bifidobacterium breve	NRBB02	SAMN06827019	2014-10-01	Netherlands	Homo sapiens	1141	1	0	0	1.00
74	GCA_002838605.1	Bifidobacterium breve	NRBB18	SAMN07160576	2014-10-01	Netherlands	Homo sapiens	1141	1	0	0	1.00
75	GCA_002838645.1	Bifidobacterium breve	NRBB20	SAMN07160580	2014-10-01	Netherlands	Homo sapiens	1141	1	0	0	1.00
76	GCA_002838665.1	Bifidobacterium breve	NRBB27	SAMN07160976	2014-10-01	Netherlands	Homo sapiens	1141	1	0	0	1.00
77	GCA_002838685.1	Bifidobacterium breve	NRBB49	SAMN07160977	2014-10-01	Netherlands	Homo sapiens	1141	1	0	0	1.00
78	GCA_002838745.1	Bifidobacterium breve	NRBB08	SAMN07160574	2014-10-01	Netherlands	Homo sapiens	1141	1	0	0	1.00
79	GCA_006546585.1	Bifidobacterium breve	SC95	SAMN12108292	2012-05-22	USA	Homo sapiens	1141	2	0	0	2.00
80	GCA_028201785.1	Bifidobacterium breve	BSD2780061687st1_F3_BSD3448080968_160620	SAMN31321427	2016-06-20	USA	Homo sapiens	1141	2	0	0	2.00
81	GCA_028201855.1	Bifidobacterium breve	BSD2780061687st1_C6_BSD3448080968_160620	SAMN31321426	2016-06-20	USA	Homo sapiens	1141	2	0	0	2.00
82	GCA_002838525.1	Bifidobacterium breve	180W83	SAMN06829003	2014-10-01	Ireland	Homo sapiens	1142	1	0	0	1.00
83	GCA_002838625.1	Bifidobacterium breve	NRBB19	SAMN07160980	2014-10-01	Netherlands	Homo sapiens	1142	1	0	0	1.00
84	GCA_028201875.1	Bifidobacterium breve	BSD2780061687st1_C6_BSD2780061687_150420	SAMN31321425	2015-04-20	USA	Homo sapiens	1142	2	0	0	2.00
85	GCA_028203385.1	Bifidobacterium breve	BSD2780061687st1_H11_BSD2780061687_150420	SAMN31321428	2015-04-20	USA	Homo sapiens	1142	2	0	0	2.00
86	GCA_001264155.1	Bifidobacterium breve MCC 1604	MCC 1604	SAMN03978800	-	Japan	Homo sapiens	1143	2	0	0	2.00
87	GCA_003370155.1	Bifidobacterium breve	12-4	SAMN07189840	2005	Canada	Homo sapiens	1143	1	0	0	1.00
88	GCA_003370175.1	Bifidobacterium breve	322-1	SAMN07189839	2012	Canada: Toronto	Homo sapiens	1143	2	0	0	2.00
89	GCA_901980275.1	Bifidobacterium breve	INIA P734	SAMEA5675151	2008	Spain	Homo sapiens	1143	1	0	0	1.00
90	GCA_000466545.1	Bifidobacterium breve JCP7499	JCP7499	SAMN02436887	-	-	Homo sapiens	1144	3	0	0	3.00
91	GCA_001025175.1	Bifidobacterium breve DSM 20213 = JCM 1192	-	SAMD00061041	-	-	-	1144	1	0	0	1.00
92	GCA_001263935.1	Bifidobacterium breve MCC 1605	MCC 1605	SAMN03978805	-	Japan	Homo sapiens	1144	2	0	0	2.00
93	GCA_001546235.1	Bifidobacterium breve	GED8481	SAMN03842221	-	-	Homo sapiens	1144	2	0	0	2.00
94	GCA_002838565.1	Bifidobacterium breve	139W423	SAMN06829002	2014-10-01	Ireland	Homo sapiens	1144	2	0	0	2.00
95	GCA_003813065.1	Bifidobacterium breve	FDAARGOS_561	SAMN10163185	1963	-	Homo sapiens	1144	1	0	0	1.00
96	GCA_027212715.1	Bifidobacterium breve	SDS-967-OWr	SAMN32244254	2019-02-21	Canada: Vancouver	Homo sapiens	1144	1	0	0	1.00
97	GCA_027212825.1	Bifidobacterium breve	SDS-968-OWr	SAMN32244256	2019-06-24	Canada: Vancouver	Homo sapiens	1144	1	0	0	1.00
98	GCA_027215105.1	Bifidobacterium breve	SDS-965-OWr	SAMN32244241	2019-03-12	Canada: Vancouver	Homo sapiens	1144	1	0	0	1.00
99	GCA_000158015.1	Bifidobacterium breve DSM 20213 = JCM 1192	DSM 20213	SAMN00008778	-	-	Homo sapiens	1145	2	0	0	2.00
100	GCA_002838225.1	Bifidobacterium breve	DRBB26	SAMN06827973	2014-10-01	Netherlands	Homo sapiens	1145	3	0	0	3.00