GCA_001267905.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDNPAGMNP_17 (original name was: gnl|Prokka|DNPAGMNP_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	RiPP-like	10,963	19,614	plantaricyclin	RiPP	100%

gnlProkkaDNPAGMNP_40 (original name was: gnl|Prokka|DNPAGMNP_40)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	cyclic-lactone-autoinducer	1	11,016

gnlProkkaDNPAGMNP_41 (original name was: gnl|Prokka|DNPAGMNP_41)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	terpene	24,704	45,585

gnlProkkaDNPAGMNP_45 (original name was: gnl|Prokka|DNPAGMNP_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	T3PKS	114,672	155,841

No secondary metabolite regions were found in these records:: gnlProkkaDNPAGMNP_1 (original name was: gnl|Prokka|DNPAGMNP_1); gnlProkkaDNPAGMNP_2 (original name was: gnl|Prokka|DNPAGMNP_2); gnlProkkaDNPAGMNP_3 (original name was: gnl|Prokka|DNPAGMNP_3); gnlProkkaDNPAGMNP_4 (original name was: gnl|Prokka|DNPAGMNP_4); gnlProkkaDNPAGMNP_5 (original name was: gnl|Prokka|DNPAGMNP_5); gnlProkkaDNPAGMNP_6 (original name was: gnl|Prokka|DNPAGMNP_6); gnlProkkaDNPAGMNP_7 (original name was: gnl|Prokka|DNPAGMNP_7); gnlProkkaDNPAGMNP_8 (original name was: gnl|Prokka|DNPAGMNP_8); gnlProkkaDNPAGMNP_9 (original name was: gnl|Prokka|DNPAGMNP_9); gnlProkkaDNPAGMNP_10 (original name was: gnl|Prokka|DNPAGMNP_10); gnlProkkaDNPAGMNP_11 (original name was: gnl|Prokka|DNPAGMNP_11); gnlProkkaDNPAGMNP_12 (original name was: gnl|Prokka|DNPAGMNP_12); gnlProkkaDNPAGMNP_13 (original name was: gnl|Prokka|DNPAGMNP_13); gnlProkkaDNPAGMNP_14 (original name was: gnl|Prokka|DNPAGMNP_14); gnlProkkaDNPAGMNP_15 (original name was: gnl|Prokka|DNPAGMNP_15); gnlProkkaDNPAGMNP_16 (original name was: gnl|Prokka|DNPAGMNP_16); gnlProkkaDNPAGMNP_18 (original name was: gnl|Prokka|DNPAGMNP_18); gnlProkkaDNPAGMNP_19 (original name was: gnl|Prokka|DNPAGMNP_19); gnlProkkaDNPAGMNP_20 (original name was: gnl|Prokka|DNPAGMNP_20); gnlProkkaDNPAGMNP_21 (original name was: gnl|Prokka|DNPAGMNP_21); gnlProkkaDNPAGMNP_22 (original name was: gnl|Prokka|DNPAGMNP_22); gnlProkkaDNPAGMNP_23 (original name was: gnl|Prokka|DNPAGMNP_23); gnlProkkaDNPAGMNP_24 (original name was: gnl|Prokka|DNPAGMNP_24); gnlProkkaDNPAGMNP_25 (original name was: gnl|Prokka|DNPAGMNP_25); gnlProkkaDNPAGMNP_26 (original name was: gnl|Prokka|DNPAGMNP_26); gnlProkkaDNPAGMNP_27 (original name was: gnl|Prokka|DNPAGMNP_27); gnlProkkaDNPAGMNP_28 (original name was: gnl|Prokka|DNPAGMNP_28); gnlProkkaDNPAGMNP_29 (original name was: gnl|Prokka|DNPAGMNP_29); gnlProkkaDNPAGMNP_30 (original name was: gnl|Prokka|DNPAGMNP_30); gnlProkkaDNPAGMNP_31 (original name was: gnl|Prokka|DNPAGMNP_31); gnlProkkaDNPAGMNP_32 (original name was: gnl|Prokka|DNPAGMNP_32); gnlProkkaDNPAGMNP_33 (original name was: gnl|Prokka|DNPAGMNP_33); gnlProkkaDNPAGMNP_34 (original name was: gnl|Prokka|DNPAGMNP_34); gnlProkkaDNPAGMNP_35 (original name was: gnl|Prokka|DNPAGMNP_35); gnlProkkaDNPAGMNP_36 (original name was: gnl|Prokka|DNPAGMNP_36); gnlProkkaDNPAGMNP_37 (original name was: gnl|Prokka|DNPAGMNP_37); gnlProkkaDNPAGMNP_38 (original name was: gnl|Prokka|DNPAGMNP_38); gnlProkkaDNPAGMNP_39 (original name was: gnl|Prokka|DNPAGMNP_39); gnlProkkaDNPAGMNP_42 (original name was: gnl|Prokka|DNPAGMNP_42); gnlProkkaDNPAGMNP_43 (original name was: gnl|Prokka|DNPAGMNP_43); gnlProkkaDNPAGMNP_44 (original name was: gnl|Prokka|DNPAGMNP_44)

Compact view

gnlProkkaDNPAGMNP_17 - Region 1 - RiPP-like

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Location: 10,963 - 19,614 nt. (total: 8,652 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaDNPAGMNP_40 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 11,016 nt. (total: 11,016 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDNPAGMNP_41 - Region 1 - terpene

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Location: 24,704 - 45,585 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDNPAGMNP_45 - Region 1 - T3PKS

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Location: 114,672 - 155,841 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.