GCA_001368775.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPBMPDJDH_2 (original name was: gnl|Prokka|PBMPDJDH_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	117,868	130,018

gnlProkkaPBMPDJDH_19 (original name was: gnl|Prokka|PBMPDJDH_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	T3PKS	30,278	54,581

gnlProkkaPBMPDJDH_26 (original name was: gnl|Prokka|PBMPDJDH_26)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	terpene	1	13,767

gnlProkkaPBMPDJDH_31 (original name was: gnl|Prokka|PBMPDJDH_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	cyclic-lactone-autoinducer	9,466	30,171

Region	Type	From	To	Similarity
Region 2.1	RiPP-like	117,868	130,018
Region 19.1	T3PKS	30,278	54,581
Region 26.1	terpene	1	13,767
Region 31.1	cyclic-lactone-autoinducer	9,466	30,171

No secondary metabolite regions were found in these records:: gnlProkkaPBMPDJDH_1 (original name was: gnl|Prokka|PBMPDJDH_1); gnlProkkaPBMPDJDH_3 (original name was: gnl|Prokka|PBMPDJDH_3); gnlProkkaPBMPDJDH_4 (original name was: gnl|Prokka|PBMPDJDH_4); gnlProkkaPBMPDJDH_5 (original name was: gnl|Prokka|PBMPDJDH_5); gnlProkkaPBMPDJDH_6 (original name was: gnl|Prokka|PBMPDJDH_6); gnlProkkaPBMPDJDH_7 (original name was: gnl|Prokka|PBMPDJDH_7); gnlProkkaPBMPDJDH_8 (original name was: gnl|Prokka|PBMPDJDH_8); gnlProkkaPBMPDJDH_9 (original name was: gnl|Prokka|PBMPDJDH_9); gnlProkkaPBMPDJDH_10 (original name was: gnl|Prokka|PBMPDJDH_10); gnlProkkaPBMPDJDH_11 (original name was: gnl|Prokka|PBMPDJDH_11); gnlProkkaPBMPDJDH_12 (original name was: gnl|Prokka|PBMPDJDH_12); gnlProkkaPBMPDJDH_13 (original name was: gnl|Prokka|PBMPDJDH_13); gnlProkkaPBMPDJDH_14 (original name was: gnl|Prokka|PBMPDJDH_14); gnlProkkaPBMPDJDH_15 (original name was: gnl|Prokka|PBMPDJDH_15); gnlProkkaPBMPDJDH_16 (original name was: gnl|Prokka|PBMPDJDH_16); gnlProkkaPBMPDJDH_17 (original name was: gnl|Prokka|PBMPDJDH_17); gnlProkkaPBMPDJDH_18 (original name was: gnl|Prokka|PBMPDJDH_18); gnlProkkaPBMPDJDH_20 (original name was: gnl|Prokka|PBMPDJDH_20); gnlProkkaPBMPDJDH_21 (original name was: gnl|Prokka|PBMPDJDH_21); gnlProkkaPBMPDJDH_22 (original name was: gnl|Prokka|PBMPDJDH_22); gnlProkkaPBMPDJDH_23 (original name was: gnl|Prokka|PBMPDJDH_23); gnlProkkaPBMPDJDH_24 (original name was: gnl|Prokka|PBMPDJDH_24); gnlProkkaPBMPDJDH_25 (original name was: gnl|Prokka|PBMPDJDH_25); gnlProkkaPBMPDJDH_27 (original name was: gnl|Prokka|PBMPDJDH_27); gnlProkkaPBMPDJDH_28 (original name was: gnl|Prokka|PBMPDJDH_28); gnlProkkaPBMPDJDH_29 (original name was: gnl|Prokka|PBMPDJDH_29); gnlProkkaPBMPDJDH_30 (original name was: gnl|Prokka|PBMPDJDH_30); gnlProkkaPBMPDJDH_32 (original name was: gnl|Prokka|PBMPDJDH_32); gnlProkkaPBMPDJDH_33 (original name was: gnl|Prokka|PBMPDJDH_33); gnlProkkaPBMPDJDH_34 (original name was: gnl|Prokka|PBMPDJDH_34); gnlProkkaPBMPDJDH_35 (original name was: gnl|Prokka|PBMPDJDH_35); gnlProkkaPBMPDJDH_36 (original name was: gnl|Prokka|PBMPDJDH_36); gnlProkkaPBMPDJDH_37 (original name was: gnl|Prokka|PBMPDJDH_37); gnlProkkaPBMPDJDH_38 (original name was: gnl|Prokka|PBMPDJDH_38); gnlProkkaPBMPDJDH_39 (original name was: gnl|Prokka|PBMPDJDH_39); gnlProkkaPBMPDJDH_40 (original name was: gnl|Prokka|PBMPDJDH_40); gnlProkkaPBMPDJDH_41 (original name was: gnl|Prokka|PBMPDJDH_41); gnlProkkaPBMPDJDH_42 (original name was: gnl|Prokka|PBMPDJDH_42); gnlProkkaPBMPDJDH_43 (original name was: gnl|Prokka|PBMPDJDH_43); gnlProkkaPBMPDJDH_44 (original name was: gnl|Prokka|PBMPDJDH_44); gnlProkkaPBMPDJDH_45 (original name was: gnl|Prokka|PBMPDJDH_45); gnlProkkaPBMPDJDH_46 (original name was: gnl|Prokka|PBMPDJDH_46); gnlProkkaPBMPDJDH_47 (original name was: gnl|Prokka|PBMPDJDH_47); gnlProkkaPBMPDJDH_48 (original name was: gnl|Prokka|PBMPDJDH_48); gnlProkkaPBMPDJDH_49 (original name was: gnl|Prokka|PBMPDJDH_49); gnlProkkaPBMPDJDH_50 (original name was: gnl|Prokka|PBMPDJDH_50); gnlProkkaPBMPDJDH_51 (original name was: gnl|Prokka|PBMPDJDH_51); gnlProkkaPBMPDJDH_52 (original name was: gnl|Prokka|PBMPDJDH_52); gnlProkkaPBMPDJDH_53 (original name was: gnl|Prokka|PBMPDJDH_53); gnlProkkaPBMPDJDH_54 (original name was: gnl|Prokka|PBMPDJDH_54); gnlProkkaPBMPDJDH_55 (original name was: gnl|Prokka|PBMPDJDH_55); gnlProkkaPBMPDJDH_56 (original name was: gnl|Prokka|PBMPDJDH_56); gnlProkkaPBMPDJDH_57 (original name was: gnl|Prokka|PBMPDJDH_57); gnlProkkaPBMPDJDH_58 (original name was: gnl|Prokka|PBMPDJDH_58); gnlProkkaPBMPDJDH_59 (original name was: gnl|Prokka|PBMPDJDH_59); gnlProkkaPBMPDJDH_60 (original name was: gnl|Prokka|PBMPDJDH_60); gnlProkkaPBMPDJDH_61 (original name was: gnl|Prokka|PBMPDJDH_61); gnlProkkaPBMPDJDH_62 (original name was: gnl|Prokka|PBMPDJDH_62); gnlProkkaPBMPDJDH_63 (original name was: gnl|Prokka|PBMPDJDH_63); gnlProkkaPBMPDJDH_64 (original name was: gnl|Prokka|PBMPDJDH_64); gnlProkkaPBMPDJDH_65 (original name was: gnl|Prokka|PBMPDJDH_65)

Compact view

gnlProkkaPBMPDJDH_2 - Region 1 - RiPP-like

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Location: 117,868 - 130,018 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPBMPDJDH_19 - Region 1 - T3PKS

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Location: 30,278 - 54,581 nt. (total: 24,304 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPBMPDJDH_26 - Region 1 - terpene

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Location: 1 - 13,767 nt. (total: 13,767 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPBMPDJDH_31 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,466 - 30,171 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.