GCA_001435405.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMDNDEBEL_1 (original name was: gnl|Prokka|MDNDEBEL_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	273,879	315,051

gnlProkkaMDNDEBEL_4 (original name was: gnl|Prokka|MDNDEBEL_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RiPP-like	1,299	11,484

gnlProkkaMDNDEBEL_7 (original name was: gnl|Prokka|MDNDEBEL_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RiPP-like	81,314	87,974

Region	Type	From	To	Similarity
Region 1.1	T3PKS	273,879	315,051
Region 4.1	RiPP-like	1,299	11,484
Region 7.1	RiPP-like	81,314	87,974

No secondary metabolite regions were found in these records:: gnlProkkaMDNDEBEL_2 (original name was: gnl|Prokka|MDNDEBEL_2); gnlProkkaMDNDEBEL_3 (original name was: gnl|Prokka|MDNDEBEL_3); gnlProkkaMDNDEBEL_5 (original name was: gnl|Prokka|MDNDEBEL_5); gnlProkkaMDNDEBEL_6 (original name was: gnl|Prokka|MDNDEBEL_6); gnlProkkaMDNDEBEL_8 (original name was: gnl|Prokka|MDNDEBEL_8); gnlProkkaMDNDEBEL_9 (original name was: gnl|Prokka|MDNDEBEL_9); gnlProkkaMDNDEBEL_10 (original name was: gnl|Prokka|MDNDEBEL_10); gnlProkkaMDNDEBEL_11 (original name was: gnl|Prokka|MDNDEBEL_11); gnlProkkaMDNDEBEL_12 (original name was: gnl|Prokka|MDNDEBEL_12); gnlProkkaMDNDEBEL_13 (original name was: gnl|Prokka|MDNDEBEL_13); gnlProkkaMDNDEBEL_14 (original name was: gnl|Prokka|MDNDEBEL_14); gnlProkkaMDNDEBEL_15 (original name was: gnl|Prokka|MDNDEBEL_15); gnlProkkaMDNDEBEL_16 (original name was: gnl|Prokka|MDNDEBEL_16); gnlProkkaMDNDEBEL_17 (original name was: gnl|Prokka|MDNDEBEL_17); gnlProkkaMDNDEBEL_18 (original name was: gnl|Prokka|MDNDEBEL_18); gnlProkkaMDNDEBEL_19 (original name was: gnl|Prokka|MDNDEBEL_19); gnlProkkaMDNDEBEL_20 (original name was: gnl|Prokka|MDNDEBEL_20); gnlProkkaMDNDEBEL_21 (original name was: gnl|Prokka|MDNDEBEL_21); gnlProkkaMDNDEBEL_22 (original name was: gnl|Prokka|MDNDEBEL_22); gnlProkkaMDNDEBEL_23 (original name was: gnl|Prokka|MDNDEBEL_23); gnlProkkaMDNDEBEL_24 (original name was: gnl|Prokka|MDNDEBEL_24); gnlProkkaMDNDEBEL_25 (original name was: gnl|Prokka|MDNDEBEL_25); gnlProkkaMDNDEBEL_26 (original name was: gnl|Prokka|MDNDEBEL_26); gnlProkkaMDNDEBEL_27 (original name was: gnl|Prokka|MDNDEBEL_27); gnlProkkaMDNDEBEL_28 (original name was: gnl|Prokka|MDNDEBEL_28); gnlProkkaMDNDEBEL_29 (original name was: gnl|Prokka|MDNDEBEL_29); gnlProkkaMDNDEBEL_33 (original name was: gnl|Prokka|MDNDEBEL_33); gnlProkkaMDNDEBEL_34 (original name was: gnl|Prokka|MDNDEBEL_34); gnlProkkaMDNDEBEL_35 (original name was: gnl|Prokka|MDNDEBEL_35); gnlProkkaMDNDEBEL_36 (original name was: gnl|Prokka|MDNDEBEL_36); gnlProkkaMDNDEBEL_37 (original name was: gnl|Prokka|MDNDEBEL_37); gnlProkkaMDNDEBEL_38 (original name was: gnl|Prokka|MDNDEBEL_38)

Compact view

gnlProkkaMDNDEBEL_1 - Region 1 - T3PKS

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Location: 273,879 - 315,051 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMDNDEBEL_4 - Region 1 - RiPP-like

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Location: 1,299 - 11,484 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMDNDEBEL_7 - Region 1 - RiPP-like

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Location: 81,314 - 87,974 nt. (total: 6,661 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.