GCA_001437195.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGHFOOCEI_3 (original name was: gnl|Prokka|GHFOOCEI_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	lanthipeptide-class-iii	22,916	45,417

gnlProkkaGHFOOCEI_23 (original name was: gnl|Prokka|GHFOOCEI_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	70,512	81,477

gnlProkkaGHFOOCEI_34 (original name was: gnl|Prokka|GHFOOCEI_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	lanthipeptide-class-iv	59,653	79,570

Region	Type	From	To	Similarity
Region 3.1	lanthipeptide-class-iii	22,916	45,417
Region 23.1	RiPP-like	70,512	81,477
Region 34.1	lanthipeptide-class-iv	59,653	79,570

No secondary metabolite regions were found in these records:: gnlProkkaGHFOOCEI_1 (original name was: gnl|Prokka|GHFOOCEI_1); gnlProkkaGHFOOCEI_2 (original name was: gnl|Prokka|GHFOOCEI_2); gnlProkkaGHFOOCEI_4 (original name was: gnl|Prokka|GHFOOCEI_4); gnlProkkaGHFOOCEI_5 (original name was: gnl|Prokka|GHFOOCEI_5); gnlProkkaGHFOOCEI_6 (original name was: gnl|Prokka|GHFOOCEI_6); gnlProkkaGHFOOCEI_7 (original name was: gnl|Prokka|GHFOOCEI_7); gnlProkkaGHFOOCEI_8 (original name was: gnl|Prokka|GHFOOCEI_8); gnlProkkaGHFOOCEI_9 (original name was: gnl|Prokka|GHFOOCEI_9); gnlProkkaGHFOOCEI_10 (original name was: gnl|Prokka|GHFOOCEI_10); gnlProkkaGHFOOCEI_11 (original name was: gnl|Prokka|GHFOOCEI_11); gnlProkkaGHFOOCEI_12 (original name was: gnl|Prokka|GHFOOCEI_12); gnlProkkaGHFOOCEI_13 (original name was: gnl|Prokka|GHFOOCEI_13); gnlProkkaGHFOOCEI_14 (original name was: gnl|Prokka|GHFOOCEI_14); gnlProkkaGHFOOCEI_15 (original name was: gnl|Prokka|GHFOOCEI_15); gnlProkkaGHFOOCEI_16 (original name was: gnl|Prokka|GHFOOCEI_16); gnlProkkaGHFOOCEI_17 (original name was: gnl|Prokka|GHFOOCEI_17); gnlProkkaGHFOOCEI_18 (original name was: gnl|Prokka|GHFOOCEI_18); gnlProkkaGHFOOCEI_19 (original name was: gnl|Prokka|GHFOOCEI_19); gnlProkkaGHFOOCEI_20 (original name was: gnl|Prokka|GHFOOCEI_20); gnlProkkaGHFOOCEI_21 (original name was: gnl|Prokka|GHFOOCEI_21); gnlProkkaGHFOOCEI_22 (original name was: gnl|Prokka|GHFOOCEI_22); gnlProkkaGHFOOCEI_24 (original name was: gnl|Prokka|GHFOOCEI_24); gnlProkkaGHFOOCEI_25 (original name was: gnl|Prokka|GHFOOCEI_25); gnlProkkaGHFOOCEI_26 (original name was: gnl|Prokka|GHFOOCEI_26); gnlProkkaGHFOOCEI_27 (original name was: gnl|Prokka|GHFOOCEI_27); gnlProkkaGHFOOCEI_28 (original name was: gnl|Prokka|GHFOOCEI_28); gnlProkkaGHFOOCEI_29 (original name was: gnl|Prokka|GHFOOCEI_29); gnlProkkaGHFOOCEI_30 (original name was: gnl|Prokka|GHFOOCEI_30); gnlProkkaGHFOOCEI_31 (original name was: gnl|Prokka|GHFOOCEI_31); gnlProkkaGHFOOCEI_32 (original name was: gnl|Prokka|GHFOOCEI_32); gnlProkkaGHFOOCEI_33 (original name was: gnl|Prokka|GHFOOCEI_33); gnlProkkaGHFOOCEI_35 (original name was: gnl|Prokka|GHFOOCEI_35); gnlProkkaGHFOOCEI_36 (original name was: gnl|Prokka|GHFOOCEI_36); gnlProkkaGHFOOCEI_37 (original name was: gnl|Prokka|GHFOOCEI_37); gnlProkkaGHFOOCEI_38 (original name was: gnl|Prokka|GHFOOCEI_38); gnlProkkaGHFOOCEI_39 (original name was: gnl|Prokka|GHFOOCEI_39); gnlProkkaGHFOOCEI_40 (original name was: gnl|Prokka|GHFOOCEI_40); gnlProkkaGHFOOCEI_41 (original name was: gnl|Prokka|GHFOOCEI_41); gnlProkkaGHFOOCEI_42 (original name was: gnl|Prokka|GHFOOCEI_42); gnlProkkaGHFOOCEI_43 (original name was: gnl|Prokka|GHFOOCEI_43); gnlProkkaGHFOOCEI_44 (original name was: gnl|Prokka|GHFOOCEI_44); gnlProkkaGHFOOCEI_45 (original name was: gnl|Prokka|GHFOOCEI_45); gnlProkkaGHFOOCEI_46 (original name was: gnl|Prokka|GHFOOCEI_46); gnlProkkaGHFOOCEI_47 (original name was: gnl|Prokka|GHFOOCEI_47); gnlProkkaGHFOOCEI_48 (original name was: gnl|Prokka|GHFOOCEI_48); gnlProkkaGHFOOCEI_49 (original name was: gnl|Prokka|GHFOOCEI_49); gnlProkkaGHFOOCEI_50 (original name was: gnl|Prokka|GHFOOCEI_50); gnlProkkaGHFOOCEI_51 (original name was: gnl|Prokka|GHFOOCEI_51); gnlProkkaGHFOOCEI_52 (original name was: gnl|Prokka|GHFOOCEI_52); gnlProkkaGHFOOCEI_53 (original name was: gnl|Prokka|GHFOOCEI_53); gnlProkkaGHFOOCEI_54 (original name was: gnl|Prokka|GHFOOCEI_54); gnlProkkaGHFOOCEI_56 (original name was: gnl|Prokka|GHFOOCEI_56); gnlProkkaGHFOOCEI_67 (original name was: gnl|Prokka|GHFOOCEI_67); gnlProkkaGHFOOCEI_78 (original name was: gnl|Prokka|GHFOOCEI_78); gnlProkkaGHFOOCEI_80 (original name was: gnl|Prokka|GHFOOCEI_80)

Compact view

gnlProkkaGHFOOCEI_3 - Region 1 - lanthipeptide-class-iii

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Location: 22,916 - 45,417 nt. (total: 22,502 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaGHFOOCEI_23 - Region 1 - RiPP-like

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Location: 70,512 - 81,477 nt. (total: 10,966 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGHFOOCEI_34 - Region 1 - lanthipeptide-class-iv

Download region GenBank file

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Location: 59,653 - 79,570 nt. (total: 19,918 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.