GCA_001444495.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOHBFBPDH_1 (original name was: gnl|Prokka|OHBFBPDH_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	2,810	14,960

gnlProkkaOHBFBPDH_5 (original name was: gnl|Prokka|OHBFBPDH_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	T3PKS	1	31,839

gnlProkkaOHBFBPDH_6 (original name was: gnl|Prokka|OHBFBPDH_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	terpene	28,230	49,111

gnlProkkaOHBFBPDH_7 (original name was: gnl|Prokka|OHBFBPDH_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	cyclic-lactone-autoinducer	685,987	706,692

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	2,810	14,960
Region 5.1	T3PKS	1	31,839
Region 6.1	terpene	28,230	49,111
Region 7.1	cyclic-lactone-autoinducer	685,987	706,692

No secondary metabolite regions were found in these records:: gnlProkkaOHBFBPDH_2 (original name was: gnl|Prokka|OHBFBPDH_2); gnlProkkaOHBFBPDH_3 (original name was: gnl|Prokka|OHBFBPDH_3); gnlProkkaOHBFBPDH_4 (original name was: gnl|Prokka|OHBFBPDH_4); gnlProkkaOHBFBPDH_8 (original name was: gnl|Prokka|OHBFBPDH_8); gnlProkkaOHBFBPDH_9 (original name was: gnl|Prokka|OHBFBPDH_9); gnlProkkaOHBFBPDH_10 (original name was: gnl|Prokka|OHBFBPDH_10); gnlProkkaOHBFBPDH_11 (original name was: gnl|Prokka|OHBFBPDH_11); gnlProkkaOHBFBPDH_12 (original name was: gnl|Prokka|OHBFBPDH_12); gnlProkkaOHBFBPDH_13 (original name was: gnl|Prokka|OHBFBPDH_13); gnlProkkaOHBFBPDH_14 (original name was: gnl|Prokka|OHBFBPDH_14)

Compact view

gnlProkkaOHBFBPDH_1 - Region 1 - RiPP-like

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Location: 2,810 - 14,960 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOHBFBPDH_5 - Region 1 - T3PKS

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Location: 1 - 31,839 nt. (total: 31,839 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOHBFBPDH_6 - Region 1 - terpene

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Location: 28,230 - 49,111 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOHBFBPDH_7 - Region 1 - cyclic-lactone-autoinducer

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Location: 685,987 - 706,692 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.