GCA_001541385.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEDOBIMJI_1 (original name was: gnl|Prokka|EDOBIMJI_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	38,612	47,534

gnlProkkaEDOBIMJI_20 (original name was: gnl|Prokka|EDOBIMJI_20)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RiPP-like	1	11,821	gassericin T	RiPP	44%

gnlProkkaEDOBIMJI_24 (original name was: gnl|Prokka|EDOBIMJI_24)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	phosphonate	1	25,833

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RiPP-like	38,612	47,534
Region 20.1	RiPP-like	1	11,821	gassericin T	RiPP	44%
Region 24.1	phosphonate	1	25,833

No secondary metabolite regions were found in these records:: gnlProkkaEDOBIMJI_2 (original name was: gnl|Prokka|EDOBIMJI_2); gnlProkkaEDOBIMJI_3 (original name was: gnl|Prokka|EDOBIMJI_3); gnlProkkaEDOBIMJI_4 (original name was: gnl|Prokka|EDOBIMJI_4); gnlProkkaEDOBIMJI_5 (original name was: gnl|Prokka|EDOBIMJI_5); gnlProkkaEDOBIMJI_6 (original name was: gnl|Prokka|EDOBIMJI_6); gnlProkkaEDOBIMJI_7 (original name was: gnl|Prokka|EDOBIMJI_7); gnlProkkaEDOBIMJI_8 (original name was: gnl|Prokka|EDOBIMJI_8); gnlProkkaEDOBIMJI_9 (original name was: gnl|Prokka|EDOBIMJI_9); gnlProkkaEDOBIMJI_10 (original name was: gnl|Prokka|EDOBIMJI_10); gnlProkkaEDOBIMJI_11 (original name was: gnl|Prokka|EDOBIMJI_11); gnlProkkaEDOBIMJI_12 (original name was: gnl|Prokka|EDOBIMJI_12); gnlProkkaEDOBIMJI_13 (original name was: gnl|Prokka|EDOBIMJI_13); gnlProkkaEDOBIMJI_14 (original name was: gnl|Prokka|EDOBIMJI_14); gnlProkkaEDOBIMJI_15 (original name was: gnl|Prokka|EDOBIMJI_15); gnlProkkaEDOBIMJI_16 (original name was: gnl|Prokka|EDOBIMJI_16); gnlProkkaEDOBIMJI_17 (original name was: gnl|Prokka|EDOBIMJI_17); gnlProkkaEDOBIMJI_18 (original name was: gnl|Prokka|EDOBIMJI_18); gnlProkkaEDOBIMJI_19 (original name was: gnl|Prokka|EDOBIMJI_19); gnlProkkaEDOBIMJI_21 (original name was: gnl|Prokka|EDOBIMJI_21); gnlProkkaEDOBIMJI_22 (original name was: gnl|Prokka|EDOBIMJI_22); gnlProkkaEDOBIMJI_23 (original name was: gnl|Prokka|EDOBIMJI_23); gnlProkkaEDOBIMJI_25 (original name was: gnl|Prokka|EDOBIMJI_25); gnlProkkaEDOBIMJI_26 (original name was: gnl|Prokka|EDOBIMJI_26); gnlProkkaEDOBIMJI_27 (original name was: gnl|Prokka|EDOBIMJI_27); gnlProkkaEDOBIMJI_28 (original name was: gnl|Prokka|EDOBIMJI_28); gnlProkkaEDOBIMJI_29 (original name was: gnl|Prokka|EDOBIMJI_29); gnlProkkaEDOBIMJI_30 (original name was: gnl|Prokka|EDOBIMJI_30); gnlProkkaEDOBIMJI_31 (original name was: gnl|Prokka|EDOBIMJI_31); gnlProkkaEDOBIMJI_32 (original name was: gnl|Prokka|EDOBIMJI_32); gnlProkkaEDOBIMJI_33 (original name was: gnl|Prokka|EDOBIMJI_33); gnlProkkaEDOBIMJI_34 (original name was: gnl|Prokka|EDOBIMJI_34); gnlProkkaEDOBIMJI_35 (original name was: gnl|Prokka|EDOBIMJI_35); gnlProkkaEDOBIMJI_36 (original name was: gnl|Prokka|EDOBIMJI_36); gnlProkkaEDOBIMJI_37 (original name was: gnl|Prokka|EDOBIMJI_37); gnlProkkaEDOBIMJI_38 (original name was: gnl|Prokka|EDOBIMJI_38); gnlProkkaEDOBIMJI_39 (original name was: gnl|Prokka|EDOBIMJI_39); gnlProkkaEDOBIMJI_40 (original name was: gnl|Prokka|EDOBIMJI_40); gnlProkkaEDOBIMJI_41 (original name was: gnl|Prokka|EDOBIMJI_41); gnlProkkaEDOBIMJI_42 (original name was: gnl|Prokka|EDOBIMJI_42); gnlProkkaEDOBIMJI_43 (original name was: gnl|Prokka|EDOBIMJI_43); gnlProkkaEDOBIMJI_44 (original name was: gnl|Prokka|EDOBIMJI_44); gnlProkkaEDOBIMJI_45 (original name was: gnl|Prokka|EDOBIMJI_45); gnlProkkaEDOBIMJI_47 (original name was: gnl|Prokka|EDOBIMJI_47); gnlProkkaEDOBIMJI_48 (original name was: gnl|Prokka|EDOBIMJI_48); gnlProkkaEDOBIMJI_49 (original name was: gnl|Prokka|EDOBIMJI_49); gnlProkkaEDOBIMJI_50 (original name was: gnl|Prokka|EDOBIMJI_50); gnlProkkaEDOBIMJI_51 (original name was: gnl|Prokka|EDOBIMJI_51); gnlProkkaEDOBIMJI_52 (original name was: gnl|Prokka|EDOBIMJI_52); gnlProkkaEDOBIMJI_54 (original name was: gnl|Prokka|EDOBIMJI_54); gnlProkkaEDOBIMJI_55 (original name was: gnl|Prokka|EDOBIMJI_55); gnlProkkaEDOBIMJI_56 (original name was: gnl|Prokka|EDOBIMJI_56); gnlProkkaEDOBIMJI_57 (original name was: gnl|Prokka|EDOBIMJI_57); gnlProkkaEDOBIMJI_58 (original name was: gnl|Prokka|EDOBIMJI_58); gnlProkkaEDOBIMJI_59 (original name was: gnl|Prokka|EDOBIMJI_59); gnlProkkaEDOBIMJI_60 (original name was: gnl|Prokka|EDOBIMJI_60); gnlProkkaEDOBIMJI_61 (original name was: gnl|Prokka|EDOBIMJI_61); gnlProkkaEDOBIMJI_62 (original name was: gnl|Prokka|EDOBIMJI_62); gnlProkkaEDOBIMJI_63 (original name was: gnl|Prokka|EDOBIMJI_63); gnlProkkaEDOBIMJI_64 (original name was: gnl|Prokka|EDOBIMJI_64); gnlProkkaEDOBIMJI_65 (original name was: gnl|Prokka|EDOBIMJI_65); gnlProkkaEDOBIMJI_67 (original name was: gnl|Prokka|EDOBIMJI_67); gnlProkkaEDOBIMJI_68 (original name was: gnl|Prokka|EDOBIMJI_68); gnlProkkaEDOBIMJI_69 (original name was: gnl|Prokka|EDOBIMJI_69); gnlProkkaEDOBIMJI_71 (original name was: gnl|Prokka|EDOBIMJI_71); gnlProkkaEDOBIMJI_72 (original name was: gnl|Prokka|EDOBIMJI_72); gnlProkkaEDOBIMJI_74 (original name was: gnl|Prokka|EDOBIMJI_74); gnlProkkaEDOBIMJI_78 (original name was: gnl|Prokka|EDOBIMJI_78); gnlProkkaEDOBIMJI_81 (original name was: gnl|Prokka|EDOBIMJI_81); gnlProkkaEDOBIMJI_89 (original name was: gnl|Prokka|EDOBIMJI_89); gnlProkkaEDOBIMJI_91 (original name was: gnl|Prokka|EDOBIMJI_91)

Compact view

gnlProkkaEDOBIMJI_1 - Region 1 - RiPP-like

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Location: 38,612 - 47,534 nt. (total: 8,923 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEDOBIMJI_20 - Region 1 - RiPP-like

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Location: 1 - 11,821 nt. (total: 11,821 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaEDOBIMJI_24 - Region 1 - phosphonate

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Location: 1 - 25,833 nt. (total: 25,833 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.