GCA_001619265.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBMANDGDC_2 (original name was: gnl|Prokka|BMANDGDC_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	67,444	75,835

gnlProkkaBMANDGDC_12 (original name was: gnl|Prokka|BMANDGDC_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	terpene	26,111	46,992

gnlProkkaBMANDGDC_21 (original name was: gnl|Prokka|BMANDGDC_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	T3PKS	5,366	33,469

gnlProkkaBMANDGDC_56 (original name was: gnl|Prokka|BMANDGDC_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 52.1	cyclic-lactone-autoinducer	9,421	30,126

Region	Type	From	To	Similarity
Region 2.1	RiPP-like	67,444	75,835
Region 12.1	terpene	26,111	46,992
Region 21.1	T3PKS	5,366	33,469
Region 52.1	cyclic-lactone-autoinducer	9,421	30,126

No secondary metabolite regions were found in these records:: gnlProkkaBMANDGDC_1 (original name was: gnl|Prokka|BMANDGDC_1); gnlProkkaBMANDGDC_3 (original name was: gnl|Prokka|BMANDGDC_3); gnlProkkaBMANDGDC_4 (original name was: gnl|Prokka|BMANDGDC_4); gnlProkkaBMANDGDC_5 (original name was: gnl|Prokka|BMANDGDC_5); gnlProkkaBMANDGDC_6 (original name was: gnl|Prokka|BMANDGDC_6); gnlProkkaBMANDGDC_7 (original name was: gnl|Prokka|BMANDGDC_7); gnlProkkaBMANDGDC_8 (original name was: gnl|Prokka|BMANDGDC_8); gnlProkkaBMANDGDC_9 (original name was: gnl|Prokka|BMANDGDC_9); gnlProkkaBMANDGDC_10 (original name was: gnl|Prokka|BMANDGDC_10); gnlProkkaBMANDGDC_11 (original name was: gnl|Prokka|BMANDGDC_11); gnlProkkaBMANDGDC_13 (original name was: gnl|Prokka|BMANDGDC_13); gnlProkkaBMANDGDC_14 (original name was: gnl|Prokka|BMANDGDC_14); gnlProkkaBMANDGDC_15 (original name was: gnl|Prokka|BMANDGDC_15); gnlProkkaBMANDGDC_16 (original name was: gnl|Prokka|BMANDGDC_16); gnlProkkaBMANDGDC_17 (original name was: gnl|Prokka|BMANDGDC_17); gnlProkkaBMANDGDC_18 (original name was: gnl|Prokka|BMANDGDC_18); gnlProkkaBMANDGDC_19 (original name was: gnl|Prokka|BMANDGDC_19); gnlProkkaBMANDGDC_20 (original name was: gnl|Prokka|BMANDGDC_20); gnlProkkaBMANDGDC_22 (original name was: gnl|Prokka|BMANDGDC_22); gnlProkkaBMANDGDC_23 (original name was: gnl|Prokka|BMANDGDC_23); gnlProkkaBMANDGDC_24 (original name was: gnl|Prokka|BMANDGDC_24); gnlProkkaBMANDGDC_25 (original name was: gnl|Prokka|BMANDGDC_25); gnlProkkaBMANDGDC_26 (original name was: gnl|Prokka|BMANDGDC_26); gnlProkkaBMANDGDC_27 (original name was: gnl|Prokka|BMANDGDC_27); gnlProkkaBMANDGDC_28 (original name was: gnl|Prokka|BMANDGDC_28); gnlProkkaBMANDGDC_29 (original name was: gnl|Prokka|BMANDGDC_29); gnlProkkaBMANDGDC_30 (original name was: gnl|Prokka|BMANDGDC_30); gnlProkkaBMANDGDC_31 (original name was: gnl|Prokka|BMANDGDC_31); gnlProkkaBMANDGDC_32 (original name was: gnl|Prokka|BMANDGDC_32); gnlProkkaBMANDGDC_33 (original name was: gnl|Prokka|BMANDGDC_33); gnlProkkaBMANDGDC_34 (original name was: gnl|Prokka|BMANDGDC_34); gnlProkkaBMANDGDC_35 (original name was: gnl|Prokka|BMANDGDC_35); gnlProkkaBMANDGDC_36 (original name was: gnl|Prokka|BMANDGDC_36); gnlProkkaBMANDGDC_37 (original name was: gnl|Prokka|BMANDGDC_37); gnlProkkaBMANDGDC_38 (original name was: gnl|Prokka|BMANDGDC_38); gnlProkkaBMANDGDC_39 (original name was: gnl|Prokka|BMANDGDC_39); gnlProkkaBMANDGDC_40 (original name was: gnl|Prokka|BMANDGDC_40); gnlProkkaBMANDGDC_41 (original name was: gnl|Prokka|BMANDGDC_41); gnlProkkaBMANDGDC_42 (original name was: gnl|Prokka|BMANDGDC_42); gnlProkkaBMANDGDC_43 (original name was: gnl|Prokka|BMANDGDC_43); gnlProkkaBMANDGDC_44 (original name was: gnl|Prokka|BMANDGDC_44); gnlProkkaBMANDGDC_45 (original name was: gnl|Prokka|BMANDGDC_45); gnlProkkaBMANDGDC_46 (original name was: gnl|Prokka|BMANDGDC_46); gnlProkkaBMANDGDC_47 (original name was: gnl|Prokka|BMANDGDC_47); gnlProkkaBMANDGDC_48 (original name was: gnl|Prokka|BMANDGDC_48); gnlProkkaBMANDGDC_49 (original name was: gnl|Prokka|BMANDGDC_49); gnlProkkaBMANDGDC_54 (original name was: gnl|Prokka|BMANDGDC_54); gnlProkkaBMANDGDC_55 (original name was: gnl|Prokka|BMANDGDC_55); gnlProkkaBMANDGDC_57 (original name was: gnl|Prokka|BMANDGDC_57)

Compact view

gnlProkkaBMANDGDC_2 - Region 1 - RiPP-like

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Location: 67,444 - 75,835 nt. (total: 8,392 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBMANDGDC_12 - Region 1 - terpene

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Location: 26,111 - 46,992 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBMANDGDC_21 - Region 1 - T3PKS

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Location: 5,366 - 33,469 nt. (total: 28,104 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBMANDGDC_56 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,421 - 30,126 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.