GCA_001619275.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLJEPBJKG_1 (original name was: gnl|Prokka|LJEPBJKG_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	341,773	372,856

gnlProkkaLJEPBJKG_12 (original name was: gnl|Prokka|LJEPBJKG_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	cyclic-lactone-autoinducer	77,746	98,342

gnlProkkaLJEPBJKG_34 (original name was: gnl|Prokka|LJEPBJKG_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RiPP-like	30,714	42,864

gnlProkkaLJEPBJKG_45 (original name was: gnl|Prokka|LJEPBJKG_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	terpene	24,683	45,564

Region	Type	From	To	Similarity
Region 1.1	T3PKS	341,773	372,856
Region 12.1	cyclic-lactone-autoinducer	77,746	98,342
Region 34.1	RiPP-like	30,714	42,864
Region 45.1	terpene	24,683	45,564

No secondary metabolite regions were found in these records:: gnlProkkaLJEPBJKG_2 (original name was: gnl|Prokka|LJEPBJKG_2); gnlProkkaLJEPBJKG_3 (original name was: gnl|Prokka|LJEPBJKG_3); gnlProkkaLJEPBJKG_4 (original name was: gnl|Prokka|LJEPBJKG_4); gnlProkkaLJEPBJKG_5 (original name was: gnl|Prokka|LJEPBJKG_5); gnlProkkaLJEPBJKG_6 (original name was: gnl|Prokka|LJEPBJKG_6); gnlProkkaLJEPBJKG_7 (original name was: gnl|Prokka|LJEPBJKG_7); gnlProkkaLJEPBJKG_8 (original name was: gnl|Prokka|LJEPBJKG_8); gnlProkkaLJEPBJKG_9 (original name was: gnl|Prokka|LJEPBJKG_9); gnlProkkaLJEPBJKG_10 (original name was: gnl|Prokka|LJEPBJKG_10); gnlProkkaLJEPBJKG_11 (original name was: gnl|Prokka|LJEPBJKG_11); gnlProkkaLJEPBJKG_13 (original name was: gnl|Prokka|LJEPBJKG_13); gnlProkkaLJEPBJKG_14 (original name was: gnl|Prokka|LJEPBJKG_14); gnlProkkaLJEPBJKG_15 (original name was: gnl|Prokka|LJEPBJKG_15); gnlProkkaLJEPBJKG_16 (original name was: gnl|Prokka|LJEPBJKG_16); gnlProkkaLJEPBJKG_17 (original name was: gnl|Prokka|LJEPBJKG_17); gnlProkkaLJEPBJKG_18 (original name was: gnl|Prokka|LJEPBJKG_18); gnlProkkaLJEPBJKG_19 (original name was: gnl|Prokka|LJEPBJKG_19); gnlProkkaLJEPBJKG_20 (original name was: gnl|Prokka|LJEPBJKG_20); gnlProkkaLJEPBJKG_21 (original name was: gnl|Prokka|LJEPBJKG_21); gnlProkkaLJEPBJKG_22 (original name was: gnl|Prokka|LJEPBJKG_22); gnlProkkaLJEPBJKG_23 (original name was: gnl|Prokka|LJEPBJKG_23); gnlProkkaLJEPBJKG_24 (original name was: gnl|Prokka|LJEPBJKG_24); gnlProkkaLJEPBJKG_25 (original name was: gnl|Prokka|LJEPBJKG_25); gnlProkkaLJEPBJKG_26 (original name was: gnl|Prokka|LJEPBJKG_26); gnlProkkaLJEPBJKG_27 (original name was: gnl|Prokka|LJEPBJKG_27); gnlProkkaLJEPBJKG_28 (original name was: gnl|Prokka|LJEPBJKG_28); gnlProkkaLJEPBJKG_29 (original name was: gnl|Prokka|LJEPBJKG_29); gnlProkkaLJEPBJKG_30 (original name was: gnl|Prokka|LJEPBJKG_30); gnlProkkaLJEPBJKG_31 (original name was: gnl|Prokka|LJEPBJKG_31); gnlProkkaLJEPBJKG_32 (original name was: gnl|Prokka|LJEPBJKG_32); gnlProkkaLJEPBJKG_33 (original name was: gnl|Prokka|LJEPBJKG_33); gnlProkkaLJEPBJKG_35 (original name was: gnl|Prokka|LJEPBJKG_35); gnlProkkaLJEPBJKG_36 (original name was: gnl|Prokka|LJEPBJKG_36); gnlProkkaLJEPBJKG_37 (original name was: gnl|Prokka|LJEPBJKG_37); gnlProkkaLJEPBJKG_38 (original name was: gnl|Prokka|LJEPBJKG_38); gnlProkkaLJEPBJKG_39 (original name was: gnl|Prokka|LJEPBJKG_39); gnlProkkaLJEPBJKG_40 (original name was: gnl|Prokka|LJEPBJKG_40); gnlProkkaLJEPBJKG_41 (original name was: gnl|Prokka|LJEPBJKG_41); gnlProkkaLJEPBJKG_42 (original name was: gnl|Prokka|LJEPBJKG_42); gnlProkkaLJEPBJKG_43 (original name was: gnl|Prokka|LJEPBJKG_43); gnlProkkaLJEPBJKG_44 (original name was: gnl|Prokka|LJEPBJKG_44); gnlProkkaLJEPBJKG_46 (original name was: gnl|Prokka|LJEPBJKG_46); gnlProkkaLJEPBJKG_47 (original name was: gnl|Prokka|LJEPBJKG_47); gnlProkkaLJEPBJKG_48 (original name was: gnl|Prokka|LJEPBJKG_48); gnlProkkaLJEPBJKG_49 (original name was: gnl|Prokka|LJEPBJKG_49); gnlProkkaLJEPBJKG_50 (original name was: gnl|Prokka|LJEPBJKG_50); gnlProkkaLJEPBJKG_51 (original name was: gnl|Prokka|LJEPBJKG_51); gnlProkkaLJEPBJKG_52 (original name was: gnl|Prokka|LJEPBJKG_52); gnlProkkaLJEPBJKG_53 (original name was: gnl|Prokka|LJEPBJKG_53); gnlProkkaLJEPBJKG_54 (original name was: gnl|Prokka|LJEPBJKG_54); gnlProkkaLJEPBJKG_55 (original name was: gnl|Prokka|LJEPBJKG_55); gnlProkkaLJEPBJKG_56 (original name was: gnl|Prokka|LJEPBJKG_56); gnlProkkaLJEPBJKG_57 (original name was: gnl|Prokka|LJEPBJKG_57); gnlProkkaLJEPBJKG_58 (original name was: gnl|Prokka|LJEPBJKG_58); gnlProkkaLJEPBJKG_59 (original name was: gnl|Prokka|LJEPBJKG_59); gnlProkkaLJEPBJKG_60 (original name was: gnl|Prokka|LJEPBJKG_60); gnlProkkaLJEPBJKG_61 (original name was: gnl|Prokka|LJEPBJKG_61); gnlProkkaLJEPBJKG_62 (original name was: gnl|Prokka|LJEPBJKG_62); gnlProkkaLJEPBJKG_63 (original name was: gnl|Prokka|LJEPBJKG_63); gnlProkkaLJEPBJKG_64 (original name was: gnl|Prokka|LJEPBJKG_64); gnlProkkaLJEPBJKG_65 (original name was: gnl|Prokka|LJEPBJKG_65); gnlProkkaLJEPBJKG_66 (original name was: gnl|Prokka|LJEPBJKG_66); gnlProkkaLJEPBJKG_67 (original name was: gnl|Prokka|LJEPBJKG_67); gnlProkkaLJEPBJKG_68 (original name was: gnl|Prokka|LJEPBJKG_68); gnlProkkaLJEPBJKG_69 (original name was: gnl|Prokka|LJEPBJKG_69); gnlProkkaLJEPBJKG_70 (original name was: gnl|Prokka|LJEPBJKG_70); gnlProkkaLJEPBJKG_71 (original name was: gnl|Prokka|LJEPBJKG_71); gnlProkkaLJEPBJKG_78 (original name was: gnl|Prokka|LJEPBJKG_78); gnlProkkaLJEPBJKG_85 (original name was: gnl|Prokka|LJEPBJKG_85)

Compact view

gnlProkkaLJEPBJKG_1 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 341,773 - 372,856 nt. (total: 31,084 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLJEPBJKG_12 - Region 1 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 77,746 - 98,342 nt. (total: 20,597 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLJEPBJKG_34 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 30,714 - 42,864 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLJEPBJKG_45 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 24,683 - 45,564 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.