GCA_001619295.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAPDEHJFN_1 (original name was: gnl|Prokka|APDEHJFN_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	1	34,532

gnlProkkaAPDEHJFN_5 (original name was: gnl|Prokka|APDEHJFN_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	terpene	27,407	48,288

gnlProkkaAPDEHJFN_23 (original name was: gnl|Prokka|APDEHJFN_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	cyclic-lactone-autoinducer	105,247	125,952

gnlProkkaAPDEHJFN_75 (original name was: gnl|Prokka|APDEHJFN_75)

Region	Type	From	To	Most similar known cluster		Similarity
Region 65.1	RiPP-like	1	8,909

Region	Type	From	To	Similarity
Region 1.1	T3PKS	1	34,532
Region 5.1	terpene	27,407	48,288
Region 23.1	cyclic-lactone-autoinducer	105,247	125,952
Region 65.1	RiPP-like	1	8,909

No secondary metabolite regions were found in these records:: gnlProkkaAPDEHJFN_2 (original name was: gnl|Prokka|APDEHJFN_2); gnlProkkaAPDEHJFN_3 (original name was: gnl|Prokka|APDEHJFN_3); gnlProkkaAPDEHJFN_4 (original name was: gnl|Prokka|APDEHJFN_4); gnlProkkaAPDEHJFN_6 (original name was: gnl|Prokka|APDEHJFN_6); gnlProkkaAPDEHJFN_7 (original name was: gnl|Prokka|APDEHJFN_7); gnlProkkaAPDEHJFN_8 (original name was: gnl|Prokka|APDEHJFN_8); gnlProkkaAPDEHJFN_9 (original name was: gnl|Prokka|APDEHJFN_9); gnlProkkaAPDEHJFN_10 (original name was: gnl|Prokka|APDEHJFN_10); gnlProkkaAPDEHJFN_11 (original name was: gnl|Prokka|APDEHJFN_11); gnlProkkaAPDEHJFN_12 (original name was: gnl|Prokka|APDEHJFN_12); gnlProkkaAPDEHJFN_13 (original name was: gnl|Prokka|APDEHJFN_13); gnlProkkaAPDEHJFN_14 (original name was: gnl|Prokka|APDEHJFN_14); gnlProkkaAPDEHJFN_15 (original name was: gnl|Prokka|APDEHJFN_15); gnlProkkaAPDEHJFN_16 (original name was: gnl|Prokka|APDEHJFN_16); gnlProkkaAPDEHJFN_17 (original name was: gnl|Prokka|APDEHJFN_17); gnlProkkaAPDEHJFN_18 (original name was: gnl|Prokka|APDEHJFN_18); gnlProkkaAPDEHJFN_19 (original name was: gnl|Prokka|APDEHJFN_19); gnlProkkaAPDEHJFN_20 (original name was: gnl|Prokka|APDEHJFN_20); gnlProkkaAPDEHJFN_21 (original name was: gnl|Prokka|APDEHJFN_21); gnlProkkaAPDEHJFN_22 (original name was: gnl|Prokka|APDEHJFN_22); gnlProkkaAPDEHJFN_24 (original name was: gnl|Prokka|APDEHJFN_24); gnlProkkaAPDEHJFN_25 (original name was: gnl|Prokka|APDEHJFN_25); gnlProkkaAPDEHJFN_26 (original name was: gnl|Prokka|APDEHJFN_26); gnlProkkaAPDEHJFN_27 (original name was: gnl|Prokka|APDEHJFN_27); gnlProkkaAPDEHJFN_28 (original name was: gnl|Prokka|APDEHJFN_28); gnlProkkaAPDEHJFN_29 (original name was: gnl|Prokka|APDEHJFN_29); gnlProkkaAPDEHJFN_30 (original name was: gnl|Prokka|APDEHJFN_30); gnlProkkaAPDEHJFN_31 (original name was: gnl|Prokka|APDEHJFN_31); gnlProkkaAPDEHJFN_32 (original name was: gnl|Prokka|APDEHJFN_32); gnlProkkaAPDEHJFN_33 (original name was: gnl|Prokka|APDEHJFN_33); gnlProkkaAPDEHJFN_34 (original name was: gnl|Prokka|APDEHJFN_34); gnlProkkaAPDEHJFN_35 (original name was: gnl|Prokka|APDEHJFN_35); gnlProkkaAPDEHJFN_36 (original name was: gnl|Prokka|APDEHJFN_36); gnlProkkaAPDEHJFN_37 (original name was: gnl|Prokka|APDEHJFN_37); gnlProkkaAPDEHJFN_38 (original name was: gnl|Prokka|APDEHJFN_38); gnlProkkaAPDEHJFN_39 (original name was: gnl|Prokka|APDEHJFN_39); gnlProkkaAPDEHJFN_40 (original name was: gnl|Prokka|APDEHJFN_40); gnlProkkaAPDEHJFN_41 (original name was: gnl|Prokka|APDEHJFN_41); gnlProkkaAPDEHJFN_42 (original name was: gnl|Prokka|APDEHJFN_42); gnlProkkaAPDEHJFN_43 (original name was: gnl|Prokka|APDEHJFN_43); gnlProkkaAPDEHJFN_44 (original name was: gnl|Prokka|APDEHJFN_44); gnlProkkaAPDEHJFN_45 (original name was: gnl|Prokka|APDEHJFN_45); gnlProkkaAPDEHJFN_46 (original name was: gnl|Prokka|APDEHJFN_46); gnlProkkaAPDEHJFN_47 (original name was: gnl|Prokka|APDEHJFN_47); gnlProkkaAPDEHJFN_48 (original name was: gnl|Prokka|APDEHJFN_48); gnlProkkaAPDEHJFN_49 (original name was: gnl|Prokka|APDEHJFN_49); gnlProkkaAPDEHJFN_50 (original name was: gnl|Prokka|APDEHJFN_50); gnlProkkaAPDEHJFN_51 (original name was: gnl|Prokka|APDEHJFN_51); gnlProkkaAPDEHJFN_52 (original name was: gnl|Prokka|APDEHJFN_52); gnlProkkaAPDEHJFN_53 (original name was: gnl|Prokka|APDEHJFN_53); gnlProkkaAPDEHJFN_54 (original name was: gnl|Prokka|APDEHJFN_54); gnlProkkaAPDEHJFN_55 (original name was: gnl|Prokka|APDEHJFN_55); gnlProkkaAPDEHJFN_56 (original name was: gnl|Prokka|APDEHJFN_56); gnlProkkaAPDEHJFN_57 (original name was: gnl|Prokka|APDEHJFN_57); gnlProkkaAPDEHJFN_58 (original name was: gnl|Prokka|APDEHJFN_58); gnlProkkaAPDEHJFN_59 (original name was: gnl|Prokka|APDEHJFN_59); gnlProkkaAPDEHJFN_60 (original name was: gnl|Prokka|APDEHJFN_60); gnlProkkaAPDEHJFN_61 (original name was: gnl|Prokka|APDEHJFN_61); gnlProkkaAPDEHJFN_64 (original name was: gnl|Prokka|APDEHJFN_64); gnlProkkaAPDEHJFN_66 (original name was: gnl|Prokka|APDEHJFN_66); gnlProkkaAPDEHJFN_67 (original name was: gnl|Prokka|APDEHJFN_67); gnlProkkaAPDEHJFN_76 (original name was: gnl|Prokka|APDEHJFN_76)

Compact view

gnlProkkaAPDEHJFN_1 - Region 1 - T3PKS

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Location: 1 - 34,532 nt. (total: 34,532 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAPDEHJFN_5 - Region 1 - terpene

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Location: 27,407 - 48,288 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

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Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAPDEHJFN_23 - Region 1 - cyclic-lactone-autoinducer

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Location: 105,247 - 125,952 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAPDEHJFN_75 - Region 1 - RiPP-like

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Location: 1 - 8,909 nt. (total: 8,909 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.