GCA_001633495.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDENICDJP_3 (original name was: gnl|Prokka|DENICDJP_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	terpene	49,269	70,150

gnlProkkaDENICDJP_14 (original name was: gnl|Prokka|DENICDJP_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	43,221	55,371

gnlProkkaDENICDJP_18 (original name was: gnl|Prokka|DENICDJP_18)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	cyclic-lactone-autoinducer	5,426	26,131

gnlProkkaDENICDJP_34 (original name was: gnl|Prokka|DENICDJP_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	T3PKS	30,017	71,186

Region	Type	From	To	Similarity
Region 3.1	terpene	49,269	70,150
Region 14.1	RiPP-like	43,221	55,371
Region 18.1	cyclic-lactone-autoinducer	5,426	26,131
Region 34.1	T3PKS	30,017	71,186

No secondary metabolite regions were found in these records:: gnlProkkaDENICDJP_1 (original name was: gnl|Prokka|DENICDJP_1); gnlProkkaDENICDJP_2 (original name was: gnl|Prokka|DENICDJP_2); gnlProkkaDENICDJP_4 (original name was: gnl|Prokka|DENICDJP_4); gnlProkkaDENICDJP_5 (original name was: gnl|Prokka|DENICDJP_5); gnlProkkaDENICDJP_6 (original name was: gnl|Prokka|DENICDJP_6); gnlProkkaDENICDJP_7 (original name was: gnl|Prokka|DENICDJP_7); gnlProkkaDENICDJP_8 (original name was: gnl|Prokka|DENICDJP_8); gnlProkkaDENICDJP_9 (original name was: gnl|Prokka|DENICDJP_9); gnlProkkaDENICDJP_10 (original name was: gnl|Prokka|DENICDJP_10); gnlProkkaDENICDJP_11 (original name was: gnl|Prokka|DENICDJP_11); gnlProkkaDENICDJP_12 (original name was: gnl|Prokka|DENICDJP_12); gnlProkkaDENICDJP_13 (original name was: gnl|Prokka|DENICDJP_13); gnlProkkaDENICDJP_15 (original name was: gnl|Prokka|DENICDJP_15); gnlProkkaDENICDJP_16 (original name was: gnl|Prokka|DENICDJP_16); gnlProkkaDENICDJP_17 (original name was: gnl|Prokka|DENICDJP_17); gnlProkkaDENICDJP_19 (original name was: gnl|Prokka|DENICDJP_19); gnlProkkaDENICDJP_20 (original name was: gnl|Prokka|DENICDJP_20); gnlProkkaDENICDJP_21 (original name was: gnl|Prokka|DENICDJP_21); gnlProkkaDENICDJP_22 (original name was: gnl|Prokka|DENICDJP_22); gnlProkkaDENICDJP_23 (original name was: gnl|Prokka|DENICDJP_23); gnlProkkaDENICDJP_24 (original name was: gnl|Prokka|DENICDJP_24); gnlProkkaDENICDJP_25 (original name was: gnl|Prokka|DENICDJP_25); gnlProkkaDENICDJP_26 (original name was: gnl|Prokka|DENICDJP_26); gnlProkkaDENICDJP_27 (original name was: gnl|Prokka|DENICDJP_27); gnlProkkaDENICDJP_28 (original name was: gnl|Prokka|DENICDJP_28); gnlProkkaDENICDJP_29 (original name was: gnl|Prokka|DENICDJP_29); gnlProkkaDENICDJP_30 (original name was: gnl|Prokka|DENICDJP_30); gnlProkkaDENICDJP_31 (original name was: gnl|Prokka|DENICDJP_31); gnlProkkaDENICDJP_32 (original name was: gnl|Prokka|DENICDJP_32); gnlProkkaDENICDJP_33 (original name was: gnl|Prokka|DENICDJP_33); gnlProkkaDENICDJP_35 (original name was: gnl|Prokka|DENICDJP_35); gnlProkkaDENICDJP_36 (original name was: gnl|Prokka|DENICDJP_36); gnlProkkaDENICDJP_37 (original name was: gnl|Prokka|DENICDJP_37); gnlProkkaDENICDJP_38 (original name was: gnl|Prokka|DENICDJP_38); gnlProkkaDENICDJP_39 (original name was: gnl|Prokka|DENICDJP_39); gnlProkkaDENICDJP_40 (original name was: gnl|Prokka|DENICDJP_40); gnlProkkaDENICDJP_41 (original name was: gnl|Prokka|DENICDJP_41); gnlProkkaDENICDJP_42 (original name was: gnl|Prokka|DENICDJP_42); gnlProkkaDENICDJP_43 (original name was: gnl|Prokka|DENICDJP_43); gnlProkkaDENICDJP_44 (original name was: gnl|Prokka|DENICDJP_44); gnlProkkaDENICDJP_45 (original name was: gnl|Prokka|DENICDJP_45); gnlProkkaDENICDJP_46 (original name was: gnl|Prokka|DENICDJP_46); gnlProkkaDENICDJP_47 (original name was: gnl|Prokka|DENICDJP_47); gnlProkkaDENICDJP_48 (original name was: gnl|Prokka|DENICDJP_48); gnlProkkaDENICDJP_49 (original name was: gnl|Prokka|DENICDJP_49); gnlProkkaDENICDJP_50 (original name was: gnl|Prokka|DENICDJP_50); gnlProkkaDENICDJP_51 (original name was: gnl|Prokka|DENICDJP_51); gnlProkkaDENICDJP_52 (original name was: gnl|Prokka|DENICDJP_52); gnlProkkaDENICDJP_53 (original name was: gnl|Prokka|DENICDJP_53); gnlProkkaDENICDJP_54 (original name was: gnl|Prokka|DENICDJP_54); gnlProkkaDENICDJP_55 (original name was: gnl|Prokka|DENICDJP_55); gnlProkkaDENICDJP_56 (original name was: gnl|Prokka|DENICDJP_56); gnlProkkaDENICDJP_57 (original name was: gnl|Prokka|DENICDJP_57); gnlProkkaDENICDJP_58 (original name was: gnl|Prokka|DENICDJP_58); gnlProkkaDENICDJP_59 (original name was: gnl|Prokka|DENICDJP_59); gnlProkkaDENICDJP_60 (original name was: gnl|Prokka|DENICDJP_60); gnlProkkaDENICDJP_61 (original name was: gnl|Prokka|DENICDJP_61); gnlProkkaDENICDJP_62 (original name was: gnl|Prokka|DENICDJP_62); gnlProkkaDENICDJP_63 (original name was: gnl|Prokka|DENICDJP_63); gnlProkkaDENICDJP_64 (original name was: gnl|Prokka|DENICDJP_64); gnlProkkaDENICDJP_65 (original name was: gnl|Prokka|DENICDJP_65); gnlProkkaDENICDJP_66 (original name was: gnl|Prokka|DENICDJP_66); gnlProkkaDENICDJP_67 (original name was: gnl|Prokka|DENICDJP_67); gnlProkkaDENICDJP_77 (original name was: gnl|Prokka|DENICDJP_77); gnlProkkaDENICDJP_86 (original name was: gnl|Prokka|DENICDJP_86)

Compact view

gnlProkkaDENICDJP_3 - Region 1 - terpene

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Location: 49,269 - 70,150 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDENICDJP_14 - Region 1 - RiPP-like

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Location: 43,221 - 55,371 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDENICDJP_18 - Region 1 - cyclic-lactone-autoinducer

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Location: 5,426 - 26,131 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDENICDJP_34 - Region 1 - T3PKS

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Location: 30,017 - 71,186 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.