GCA_001633565.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEJEFPEDE_4 (original name was: gnl|Prokka|EJEFPEDE_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RiPP-like	1	10,678

gnlProkkaEJEFPEDE_12 (original name was: gnl|Prokka|EJEFPEDE_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	cyclic-lactone-autoinducer	202,472	217,476

gnlProkkaEJEFPEDE_14 (original name was: gnl|Prokka|EJEFPEDE_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	terpene	1	15,610

gnlProkkaEJEFPEDE_77 (original name was: gnl|Prokka|EJEFPEDE_77)

Region	Type	From	To	Most similar known cluster		Similarity
Region 53.1	T3PKS	5,096	46,265

Region	Type	From	To	Similarity
Region 4.1	RiPP-like	1	10,678
Region 12.1	cyclic-lactone-autoinducer	202,472	217,476
Region 14.1	terpene	1	15,610
Region 53.1	T3PKS	5,096	46,265

No secondary metabolite regions were found in these records:: gnlProkkaEJEFPEDE_1 (original name was: gnl|Prokka|EJEFPEDE_1); gnlProkkaEJEFPEDE_2 (original name was: gnl|Prokka|EJEFPEDE_2); gnlProkkaEJEFPEDE_3 (original name was: gnl|Prokka|EJEFPEDE_3); gnlProkkaEJEFPEDE_5 (original name was: gnl|Prokka|EJEFPEDE_5); gnlProkkaEJEFPEDE_6 (original name was: gnl|Prokka|EJEFPEDE_6); gnlProkkaEJEFPEDE_7 (original name was: gnl|Prokka|EJEFPEDE_7); gnlProkkaEJEFPEDE_8 (original name was: gnl|Prokka|EJEFPEDE_8); gnlProkkaEJEFPEDE_9 (original name was: gnl|Prokka|EJEFPEDE_9); gnlProkkaEJEFPEDE_10 (original name was: gnl|Prokka|EJEFPEDE_10); gnlProkkaEJEFPEDE_11 (original name was: gnl|Prokka|EJEFPEDE_11); gnlProkkaEJEFPEDE_13 (original name was: gnl|Prokka|EJEFPEDE_13); gnlProkkaEJEFPEDE_15 (original name was: gnl|Prokka|EJEFPEDE_15); gnlProkkaEJEFPEDE_16 (original name was: gnl|Prokka|EJEFPEDE_16); gnlProkkaEJEFPEDE_17 (original name was: gnl|Prokka|EJEFPEDE_17); gnlProkkaEJEFPEDE_18 (original name was: gnl|Prokka|EJEFPEDE_18); gnlProkkaEJEFPEDE_19 (original name was: gnl|Prokka|EJEFPEDE_19); gnlProkkaEJEFPEDE_20 (original name was: gnl|Prokka|EJEFPEDE_20); gnlProkkaEJEFPEDE_21 (original name was: gnl|Prokka|EJEFPEDE_21); gnlProkkaEJEFPEDE_22 (original name was: gnl|Prokka|EJEFPEDE_22); gnlProkkaEJEFPEDE_23 (original name was: gnl|Prokka|EJEFPEDE_23); gnlProkkaEJEFPEDE_24 (original name was: gnl|Prokka|EJEFPEDE_24); gnlProkkaEJEFPEDE_25 (original name was: gnl|Prokka|EJEFPEDE_25); gnlProkkaEJEFPEDE_26 (original name was: gnl|Prokka|EJEFPEDE_26); gnlProkkaEJEFPEDE_27 (original name was: gnl|Prokka|EJEFPEDE_27); gnlProkkaEJEFPEDE_28 (original name was: gnl|Prokka|EJEFPEDE_28); gnlProkkaEJEFPEDE_29 (original name was: gnl|Prokka|EJEFPEDE_29); gnlProkkaEJEFPEDE_30 (original name was: gnl|Prokka|EJEFPEDE_30); gnlProkkaEJEFPEDE_31 (original name was: gnl|Prokka|EJEFPEDE_31); gnlProkkaEJEFPEDE_32 (original name was: gnl|Prokka|EJEFPEDE_32); gnlProkkaEJEFPEDE_33 (original name was: gnl|Prokka|EJEFPEDE_33); gnlProkkaEJEFPEDE_34 (original name was: gnl|Prokka|EJEFPEDE_34); gnlProkkaEJEFPEDE_35 (original name was: gnl|Prokka|EJEFPEDE_35); gnlProkkaEJEFPEDE_36 (original name was: gnl|Prokka|EJEFPEDE_36); gnlProkkaEJEFPEDE_37 (original name was: gnl|Prokka|EJEFPEDE_37); gnlProkkaEJEFPEDE_38 (original name was: gnl|Prokka|EJEFPEDE_38); gnlProkkaEJEFPEDE_39 (original name was: gnl|Prokka|EJEFPEDE_39); gnlProkkaEJEFPEDE_40 (original name was: gnl|Prokka|EJEFPEDE_40); gnlProkkaEJEFPEDE_41 (original name was: gnl|Prokka|EJEFPEDE_41); gnlProkkaEJEFPEDE_42 (original name was: gnl|Prokka|EJEFPEDE_42); gnlProkkaEJEFPEDE_43 (original name was: gnl|Prokka|EJEFPEDE_43); gnlProkkaEJEFPEDE_44 (original name was: gnl|Prokka|EJEFPEDE_44); gnlProkkaEJEFPEDE_45 (original name was: gnl|Prokka|EJEFPEDE_45); gnlProkkaEJEFPEDE_46 (original name was: gnl|Prokka|EJEFPEDE_46); gnlProkkaEJEFPEDE_47 (original name was: gnl|Prokka|EJEFPEDE_47); gnlProkkaEJEFPEDE_48 (original name was: gnl|Prokka|EJEFPEDE_48); gnlProkkaEJEFPEDE_49 (original name was: gnl|Prokka|EJEFPEDE_49); gnlProkkaEJEFPEDE_50 (original name was: gnl|Prokka|EJEFPEDE_50); gnlProkkaEJEFPEDE_55 (original name was: gnl|Prokka|EJEFPEDE_55); gnlProkkaEJEFPEDE_66 (original name was: gnl|Prokka|EJEFPEDE_66); gnlProkkaEJEFPEDE_78 (original name was: gnl|Prokka|EJEFPEDE_78)

Compact view

gnlProkkaEJEFPEDE_4 - Region 1 - RiPP-like

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Location: 1 - 10,678 nt. (total: 10,678 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEJEFPEDE_12 - Region 1 - cyclic-lactone-autoinducer

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Location: 202,472 - 217,476 nt. (total: 15,005 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEJEFPEDE_14 - Region 1 - terpene

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Location: 1 - 15,610 nt. (total: 15,610 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEJEFPEDE_77 - Region 1 - T3PKS

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Location: 5,096 - 46,265 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.