GCA_001633605.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEKENBNIB_1 (original name was: gnl|Prokka|EKENBNIB_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	518,775	544,988

gnlProkkaEKENBNIB_2 (original name was: gnl|Prokka|EKENBNIB_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	106,788	118,938

gnlProkkaEKENBNIB_4 (original name was: gnl|Prokka|EKENBNIB_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	terpene	32,267	53,148

gnlProkkaEKENBNIB_10 (original name was: gnl|Prokka|EKENBNIB_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	cyclic-lactone-autoinducer	7,103	27,808

Region	Type	From	To	Similarity
Region 1.1	T3PKS	518,775	544,988
Region 2.1	RiPP-like	106,788	118,938
Region 4.1	terpene	32,267	53,148
Region 10.1	cyclic-lactone-autoinducer	7,103	27,808

No secondary metabolite regions were found in these records:: gnlProkkaEKENBNIB_3 (original name was: gnl|Prokka|EKENBNIB_3); gnlProkkaEKENBNIB_5 (original name was: gnl|Prokka|EKENBNIB_5); gnlProkkaEKENBNIB_6 (original name was: gnl|Prokka|EKENBNIB_6); gnlProkkaEKENBNIB_7 (original name was: gnl|Prokka|EKENBNIB_7); gnlProkkaEKENBNIB_8 (original name was: gnl|Prokka|EKENBNIB_8); gnlProkkaEKENBNIB_9 (original name was: gnl|Prokka|EKENBNIB_9); gnlProkkaEKENBNIB_11 (original name was: gnl|Prokka|EKENBNIB_11); gnlProkkaEKENBNIB_12 (original name was: gnl|Prokka|EKENBNIB_12); gnlProkkaEKENBNIB_13 (original name was: gnl|Prokka|EKENBNIB_13); gnlProkkaEKENBNIB_14 (original name was: gnl|Prokka|EKENBNIB_14); gnlProkkaEKENBNIB_15 (original name was: gnl|Prokka|EKENBNIB_15); gnlProkkaEKENBNIB_16 (original name was: gnl|Prokka|EKENBNIB_16); gnlProkkaEKENBNIB_17 (original name was: gnl|Prokka|EKENBNIB_17); gnlProkkaEKENBNIB_18 (original name was: gnl|Prokka|EKENBNIB_18); gnlProkkaEKENBNIB_19 (original name was: gnl|Prokka|EKENBNIB_19); gnlProkkaEKENBNIB_20 (original name was: gnl|Prokka|EKENBNIB_20); gnlProkkaEKENBNIB_21 (original name was: gnl|Prokka|EKENBNIB_21); gnlProkkaEKENBNIB_22 (original name was: gnl|Prokka|EKENBNIB_22); gnlProkkaEKENBNIB_23 (original name was: gnl|Prokka|EKENBNIB_23); gnlProkkaEKENBNIB_32 (original name was: gnl|Prokka|EKENBNIB_32); gnlProkkaEKENBNIB_35 (original name was: gnl|Prokka|EKENBNIB_35); gnlProkkaEKENBNIB_36 (original name was: gnl|Prokka|EKENBNIB_36); gnlProkkaEKENBNIB_37 (original name was: gnl|Prokka|EKENBNIB_37); gnlProkkaEKENBNIB_38 (original name was: gnl|Prokka|EKENBNIB_38); gnlProkkaEKENBNIB_39 (original name was: gnl|Prokka|EKENBNIB_39)

Compact view

gnlProkkaEKENBNIB_1 - Region 1 - T3PKS

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Location: 518,775 - 544,988 nt. (total: 26,214 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEKENBNIB_2 - Region 1 - RiPP-like

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Location: 106,788 - 118,938 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEKENBNIB_4 - Region 1 - terpene

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Location: 32,267 - 53,148 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEKENBNIB_10 - Region 1 - cyclic-lactone-autoinducer

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Location: 7,103 - 27,808 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.