GCA_001633645.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEOHEEDNM_1 (original name was: gnl|Prokka|EOHEEDNM_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	518,702	544,354

gnlProkkaEOHEEDNM_4 (original name was: gnl|Prokka|EOHEEDNM_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RiPP-like	19,051	31,201

gnlProkkaEOHEEDNM_22 (original name was: gnl|Prokka|EOHEEDNM_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	terpene	401,352	422,233

gnlProkkaEOHEEDNM_35 (original name was: gnl|Prokka|EOHEEDNM_35)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	cyclic-lactone-autoinducer	9,317	30,022

Region	Type	From	To	Similarity
Region 1.1	T3PKS	518,702	544,354
Region 4.1	RiPP-like	19,051	31,201
Region 14.1	terpene	401,352	422,233
Region 18.1	cyclic-lactone-autoinducer	9,317	30,022

No secondary metabolite regions were found in these records:: gnlProkkaEOHEEDNM_2 (original name was: gnl|Prokka|EOHEEDNM_2); gnlProkkaEOHEEDNM_3 (original name was: gnl|Prokka|EOHEEDNM_3); gnlProkkaEOHEEDNM_5 (original name was: gnl|Prokka|EOHEEDNM_5); gnlProkkaEOHEEDNM_6 (original name was: gnl|Prokka|EOHEEDNM_6); gnlProkkaEOHEEDNM_7 (original name was: gnl|Prokka|EOHEEDNM_7); gnlProkkaEOHEEDNM_8 (original name was: gnl|Prokka|EOHEEDNM_8); gnlProkkaEOHEEDNM_9 (original name was: gnl|Prokka|EOHEEDNM_9); gnlProkkaEOHEEDNM_10 (original name was: gnl|Prokka|EOHEEDNM_10); gnlProkkaEOHEEDNM_11 (original name was: gnl|Prokka|EOHEEDNM_11); gnlProkkaEOHEEDNM_12 (original name was: gnl|Prokka|EOHEEDNM_12); gnlProkkaEOHEEDNM_13 (original name was: gnl|Prokka|EOHEEDNM_13); gnlProkkaEOHEEDNM_32 (original name was: gnl|Prokka|EOHEEDNM_32); gnlProkkaEOHEEDNM_33 (original name was: gnl|Prokka|EOHEEDNM_33); gnlProkkaEOHEEDNM_34 (original name was: gnl|Prokka|EOHEEDNM_34); gnlProkkaEOHEEDNM_36 (original name was: gnl|Prokka|EOHEEDNM_36); gnlProkkaEOHEEDNM_37 (original name was: gnl|Prokka|EOHEEDNM_37)

Compact view

gnlProkkaEOHEEDNM_1 - Region 1 - T3PKS

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Location: 518,702 - 544,354 nt. (total: 25,653 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEOHEEDNM_4 - Region 1 - RiPP-like

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Location: 19,051 - 31,201 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEOHEEDNM_22 - Region 1 - terpene

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Location: 401,352 - 422,233 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEOHEEDNM_35 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,317 - 30,022 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.