GCA_001633765.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPHIMOBNA_1 (original name was: gnl|Prokka|PHIMOBNA_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	636,821	677,990

gnlProkkaPHIMOBNA_2 (original name was: gnl|Prokka|PHIMOBNA_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	thiopeptide,LAP	10,298	32,858

gnlProkkaPHIMOBNA_4 (original name was: gnl|Prokka|PHIMOBNA_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	cyclic-lactone-autoinducer	1	11,099

gnlProkkaPHIMOBNA_12 (original name was: gnl|Prokka|PHIMOBNA_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	cyclic-lactone-autoinducer	23,756	44,461
Region 12.2	RiPP-like	505,799	517,949

gnlProkkaPHIMOBNA_33 (original name was: gnl|Prokka|PHIMOBNA_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	terpene	29,733	50,614

Region	Type	From	To	Similarity
Region 1.1	T3PKS	636,821	677,990
Region 2.1	thiopeptide,LAP	10,298	32,858
Region 4.1	cyclic-lactone-autoinducer	1	11,099
Region 12.1	cyclic-lactone-autoinducer	23,756	44,461
Region 12.2	RiPP-like	505,799	517,949
Region 23.1	terpene	29,733	50,614

No secondary metabolite regions were found in these records:: gnlProkkaPHIMOBNA_3 (original name was: gnl|Prokka|PHIMOBNA_3); gnlProkkaPHIMOBNA_5 (original name was: gnl|Prokka|PHIMOBNA_5); gnlProkkaPHIMOBNA_6 (original name was: gnl|Prokka|PHIMOBNA_6); gnlProkkaPHIMOBNA_7 (original name was: gnl|Prokka|PHIMOBNA_7); gnlProkkaPHIMOBNA_8 (original name was: gnl|Prokka|PHIMOBNA_8); gnlProkkaPHIMOBNA_9 (original name was: gnl|Prokka|PHIMOBNA_9); gnlProkkaPHIMOBNA_10 (original name was: gnl|Prokka|PHIMOBNA_10); gnlProkkaPHIMOBNA_11 (original name was: gnl|Prokka|PHIMOBNA_11); gnlProkkaPHIMOBNA_13 (original name was: gnl|Prokka|PHIMOBNA_13); gnlProkkaPHIMOBNA_14 (original name was: gnl|Prokka|PHIMOBNA_14); gnlProkkaPHIMOBNA_15 (original name was: gnl|Prokka|PHIMOBNA_15); gnlProkkaPHIMOBNA_16 (original name was: gnl|Prokka|PHIMOBNA_16); gnlProkkaPHIMOBNA_17 (original name was: gnl|Prokka|PHIMOBNA_17); gnlProkkaPHIMOBNA_18 (original name was: gnl|Prokka|PHIMOBNA_18); gnlProkkaPHIMOBNA_19 (original name was: gnl|Prokka|PHIMOBNA_19); gnlProkkaPHIMOBNA_20 (original name was: gnl|Prokka|PHIMOBNA_20); gnlProkkaPHIMOBNA_21 (original name was: gnl|Prokka|PHIMOBNA_21); gnlProkkaPHIMOBNA_22 (original name was: gnl|Prokka|PHIMOBNA_22); gnlProkkaPHIMOBNA_41 (original name was: gnl|Prokka|PHIMOBNA_41); gnlProkkaPHIMOBNA_42 (original name was: gnl|Prokka|PHIMOBNA_42); gnlProkkaPHIMOBNA_43 (original name was: gnl|Prokka|PHIMOBNA_43); gnlProkkaPHIMOBNA_44 (original name was: gnl|Prokka|PHIMOBNA_44); gnlProkkaPHIMOBNA_45 (original name was: gnl|Prokka|PHIMOBNA_45)

Compact view

gnlProkkaPHIMOBNA_1 - Region 1 - T3PKS

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Location: 636,821 - 677,990 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPHIMOBNA_2 - Region 1 - LAP,thiopeptide

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Location: 10,298 - 32,858 nt. (total: 22,561 nt) Show pHMM detection rules used

Region on contig edge.

thiopeptide: ((YcaO or TIGR03604) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)
LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03604)) or TIGR03882 or TIGR03603 or TIGR03602) and not cyanobactin_synth)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Thiopeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Thiopeptide predictions

No core peptides found.

Thiopeptides

Core peptide predictions

No core peptides found.

gnlProkkaPHIMOBNA_4 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 11,099 nt. (total: 11,099 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPHIMOBNA_12 - Region 1 - cyclic-lactone-autoinducer

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Location: 23,756 - 44,461 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPHIMOBNA_12 - Region 2 - RiPP-like

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Location: 505,799 - 517,949 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPHIMOBNA_33 - Region 1 - terpene

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Location: 29,733 - 50,614 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.