GCA_001639545.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGHFFDFOM_1 (original name was: gnl|Prokka|GHFFDFOM_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	87,676	128,845

gnlProkkaGHFFDFOM_2 (original name was: gnl|Prokka|GHFFDFOM_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	cyclic-lactone-autoinducer	1	16,786

gnlProkkaGHFFDFOM_25 (original name was: gnl|Prokka|GHFFDFOM_25)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	terpene	19,769	35,171

gnlProkkaGHFFDFOM_99 (original name was: gnl|Prokka|GHFFDFOM_99)

Region	Type	From	To	Most similar known cluster		Similarity
Region 78.1	RiPP-like	1,378	13,528

Region	Type	From	To	Similarity
Region 1.1	T3PKS	87,676	128,845
Region 2.1	cyclic-lactone-autoinducer	1	16,786
Region 14.1	terpene	19,769	35,171
Region 78.1	RiPP-like	1,378	13,528

No secondary metabolite regions were found in these records:: gnlProkkaGHFFDFOM_12 (original name was: gnl|Prokka|GHFFDFOM_12); gnlProkkaGHFFDFOM_15 (original name was: gnl|Prokka|GHFFDFOM_15); gnlProkkaGHFFDFOM_16 (original name was: gnl|Prokka|GHFFDFOM_16); gnlProkkaGHFFDFOM_17 (original name was: gnl|Prokka|GHFFDFOM_17); gnlProkkaGHFFDFOM_18 (original name was: gnl|Prokka|GHFFDFOM_18); gnlProkkaGHFFDFOM_19 (original name was: gnl|Prokka|GHFFDFOM_19); gnlProkkaGHFFDFOM_20 (original name was: gnl|Prokka|GHFFDFOM_20); gnlProkkaGHFFDFOM_21 (original name was: gnl|Prokka|GHFFDFOM_21); gnlProkkaGHFFDFOM_22 (original name was: gnl|Prokka|GHFFDFOM_22); gnlProkkaGHFFDFOM_23 (original name was: gnl|Prokka|GHFFDFOM_23); gnlProkkaGHFFDFOM_24 (original name was: gnl|Prokka|GHFFDFOM_24); gnlProkkaGHFFDFOM_26 (original name was: gnl|Prokka|GHFFDFOM_26); gnlProkkaGHFFDFOM_27 (original name was: gnl|Prokka|GHFFDFOM_27); gnlProkkaGHFFDFOM_28 (original name was: gnl|Prokka|GHFFDFOM_28); gnlProkkaGHFFDFOM_29 (original name was: gnl|Prokka|GHFFDFOM_29); gnlProkkaGHFFDFOM_30 (original name was: gnl|Prokka|GHFFDFOM_30); gnlProkkaGHFFDFOM_31 (original name was: gnl|Prokka|GHFFDFOM_31); gnlProkkaGHFFDFOM_32 (original name was: gnl|Prokka|GHFFDFOM_32); gnlProkkaGHFFDFOM_33 (original name was: gnl|Prokka|GHFFDFOM_33); gnlProkkaGHFFDFOM_34 (original name was: gnl|Prokka|GHFFDFOM_34); gnlProkkaGHFFDFOM_35 (original name was: gnl|Prokka|GHFFDFOM_35); gnlProkkaGHFFDFOM_36 (original name was: gnl|Prokka|GHFFDFOM_36); gnlProkkaGHFFDFOM_37 (original name was: gnl|Prokka|GHFFDFOM_37); gnlProkkaGHFFDFOM_38 (original name was: gnl|Prokka|GHFFDFOM_38); gnlProkkaGHFFDFOM_39 (original name was: gnl|Prokka|GHFFDFOM_39); gnlProkkaGHFFDFOM_40 (original name was: gnl|Prokka|GHFFDFOM_40); gnlProkkaGHFFDFOM_41 (original name was: gnl|Prokka|GHFFDFOM_41); gnlProkkaGHFFDFOM_42 (original name was: gnl|Prokka|GHFFDFOM_42); gnlProkkaGHFFDFOM_43 (original name was: gnl|Prokka|GHFFDFOM_43); gnlProkkaGHFFDFOM_44 (original name was: gnl|Prokka|GHFFDFOM_44); gnlProkkaGHFFDFOM_45 (original name was: gnl|Prokka|GHFFDFOM_45); gnlProkkaGHFFDFOM_46 (original name was: gnl|Prokka|GHFFDFOM_46); gnlProkkaGHFFDFOM_47 (original name was: gnl|Prokka|GHFFDFOM_47); gnlProkkaGHFFDFOM_48 (original name was: gnl|Prokka|GHFFDFOM_48); gnlProkkaGHFFDFOM_49 (original name was: gnl|Prokka|GHFFDFOM_49); gnlProkkaGHFFDFOM_50 (original name was: gnl|Prokka|GHFFDFOM_50); gnlProkkaGHFFDFOM_51 (original name was: gnl|Prokka|GHFFDFOM_51); gnlProkkaGHFFDFOM_52 (original name was: gnl|Prokka|GHFFDFOM_52); gnlProkkaGHFFDFOM_53 (original name was: gnl|Prokka|GHFFDFOM_53); gnlProkkaGHFFDFOM_54 (original name was: gnl|Prokka|GHFFDFOM_54); gnlProkkaGHFFDFOM_55 (original name was: gnl|Prokka|GHFFDFOM_55); gnlProkkaGHFFDFOM_56 (original name was: gnl|Prokka|GHFFDFOM_56); gnlProkkaGHFFDFOM_57 (original name was: gnl|Prokka|GHFFDFOM_57); gnlProkkaGHFFDFOM_58 (original name was: gnl|Prokka|GHFFDFOM_58); gnlProkkaGHFFDFOM_59 (original name was: gnl|Prokka|GHFFDFOM_59); gnlProkkaGHFFDFOM_60 (original name was: gnl|Prokka|GHFFDFOM_60); gnlProkkaGHFFDFOM_61 (original name was: gnl|Prokka|GHFFDFOM_61); gnlProkkaGHFFDFOM_62 (original name was: gnl|Prokka|GHFFDFOM_62); gnlProkkaGHFFDFOM_63 (original name was: gnl|Prokka|GHFFDFOM_63); gnlProkkaGHFFDFOM_64 (original name was: gnl|Prokka|GHFFDFOM_64); gnlProkkaGHFFDFOM_65 (original name was: gnl|Prokka|GHFFDFOM_65); gnlProkkaGHFFDFOM_66 (original name was: gnl|Prokka|GHFFDFOM_66); gnlProkkaGHFFDFOM_67 (original name was: gnl|Prokka|GHFFDFOM_67); gnlProkkaGHFFDFOM_68 (original name was: gnl|Prokka|GHFFDFOM_68); gnlProkkaGHFFDFOM_69 (original name was: gnl|Prokka|GHFFDFOM_69); gnlProkkaGHFFDFOM_70 (original name was: gnl|Prokka|GHFFDFOM_70); gnlProkkaGHFFDFOM_71 (original name was: gnl|Prokka|GHFFDFOM_71); gnlProkkaGHFFDFOM_72 (original name was: gnl|Prokka|GHFFDFOM_72); gnlProkkaGHFFDFOM_73 (original name was: gnl|Prokka|GHFFDFOM_73); gnlProkkaGHFFDFOM_74 (original name was: gnl|Prokka|GHFFDFOM_74); gnlProkkaGHFFDFOM_75 (original name was: gnl|Prokka|GHFFDFOM_75); gnlProkkaGHFFDFOM_76 (original name was: gnl|Prokka|GHFFDFOM_76); gnlProkkaGHFFDFOM_77 (original name was: gnl|Prokka|GHFFDFOM_77); gnlProkkaGHFFDFOM_78 (original name was: gnl|Prokka|GHFFDFOM_78); gnlProkkaGHFFDFOM_79 (original name was: gnl|Prokka|GHFFDFOM_79); gnlProkkaGHFFDFOM_80 (original name was: gnl|Prokka|GHFFDFOM_80); gnlProkkaGHFFDFOM_81 (original name was: gnl|Prokka|GHFFDFOM_81); gnlProkkaGHFFDFOM_82 (original name was: gnl|Prokka|GHFFDFOM_82); gnlProkkaGHFFDFOM_83 (original name was: gnl|Prokka|GHFFDFOM_83); gnlProkkaGHFFDFOM_84 (original name was: gnl|Prokka|GHFFDFOM_84); gnlProkkaGHFFDFOM_85 (original name was: gnl|Prokka|GHFFDFOM_85); gnlProkkaGHFFDFOM_86 (original name was: gnl|Prokka|GHFFDFOM_86); gnlProkkaGHFFDFOM_87 (original name was: gnl|Prokka|GHFFDFOM_87); gnlProkkaGHFFDFOM_88 (original name was: gnl|Prokka|GHFFDFOM_88)

Compact view

gnlProkkaGHFFDFOM_1 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 87,676 - 128,845 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGHFFDFOM_2 - Region 1 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 1 - 16,786 nt. (total: 16,786 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGHFFDFOM_25 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 19,769 - 35,171 nt. (total: 15,403 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGHFFDFOM_99 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1,378 - 13,528 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.