GCA_001639585.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaODJDKPKO_1 (original name was: gnl|Prokka|ODJDKPKO_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	103,817	115,967

gnlProkkaODJDKPKO_11 (original name was: gnl|Prokka|ODJDKPKO_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	1	35,069

gnlProkkaODJDKPKO_30 (original name was: gnl|Prokka|ODJDKPKO_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	cyclic-lactone-autoinducer	9,246	29,951

gnlProkkaODJDKPKO_32 (original name was: gnl|Prokka|ODJDKPKO_32)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	terpene	80,695	101,576

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	103,817	115,967
Region 11.1	T3PKS	1	35,069
Region 19.1	cyclic-lactone-autoinducer	9,246	29,951
Region 21.1	terpene	80,695	101,576

No secondary metabolite regions were found in these records:: gnlProkkaODJDKPKO_2 (original name was: gnl|Prokka|ODJDKPKO_2); gnlProkkaODJDKPKO_3 (original name was: gnl|Prokka|ODJDKPKO_3); gnlProkkaODJDKPKO_4 (original name was: gnl|Prokka|ODJDKPKO_4); gnlProkkaODJDKPKO_5 (original name was: gnl|Prokka|ODJDKPKO_5); gnlProkkaODJDKPKO_6 (original name was: gnl|Prokka|ODJDKPKO_6); gnlProkkaODJDKPKO_7 (original name was: gnl|Prokka|ODJDKPKO_7); gnlProkkaODJDKPKO_8 (original name was: gnl|Prokka|ODJDKPKO_8); gnlProkkaODJDKPKO_9 (original name was: gnl|Prokka|ODJDKPKO_9); gnlProkkaODJDKPKO_10 (original name was: gnl|Prokka|ODJDKPKO_10); gnlProkkaODJDKPKO_12 (original name was: gnl|Prokka|ODJDKPKO_12); gnlProkkaODJDKPKO_13 (original name was: gnl|Prokka|ODJDKPKO_13); gnlProkkaODJDKPKO_14 (original name was: gnl|Prokka|ODJDKPKO_14); gnlProkkaODJDKPKO_15 (original name was: gnl|Prokka|ODJDKPKO_15); gnlProkkaODJDKPKO_21 (original name was: gnl|Prokka|ODJDKPKO_21); gnlProkkaODJDKPKO_28 (original name was: gnl|Prokka|ODJDKPKO_28); gnlProkkaODJDKPKO_29 (original name was: gnl|Prokka|ODJDKPKO_29); gnlProkkaODJDKPKO_31 (original name was: gnl|Prokka|ODJDKPKO_31); gnlProkkaODJDKPKO_33 (original name was: gnl|Prokka|ODJDKPKO_33)

Compact view

gnlProkkaODJDKPKO_1 - Region 1 - RiPP-like

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Location: 103,817 - 115,967 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaODJDKPKO_11 - Region 1 - T3PKS

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Location: 1 - 35,069 nt. (total: 35,069 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaODJDKPKO_30 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,246 - 29,951 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaODJDKPKO_32 - Region 1 - terpene

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Location: 80,695 - 101,576 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.