GCA_001656675.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMAABMJFE_12 (original name was: gnl|Prokka|MAABMJFE_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	T3PKS	58,232	84,095

gnlProkkaMAABMJFE_14 (original name was: gnl|Prokka|MAABMJFE_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	70,289	80,048

gnlProkkaMAABMJFE_39 (original name was: gnl|Prokka|MAABMJFE_39)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	RiPP-like	1	5,739

Region	Type	From	To	Similarity
Region 12.1	T3PKS	58,232	84,095
Region 14.1	RiPP-like	70,289	80,048
Region 39.1	RiPP-like	1	5,739

No secondary metabolite regions were found in these records:: gnlProkkaMAABMJFE_1 (original name was: gnl|Prokka|MAABMJFE_1); gnlProkkaMAABMJFE_2 (original name was: gnl|Prokka|MAABMJFE_2); gnlProkkaMAABMJFE_3 (original name was: gnl|Prokka|MAABMJFE_3); gnlProkkaMAABMJFE_4 (original name was: gnl|Prokka|MAABMJFE_4); gnlProkkaMAABMJFE_5 (original name was: gnl|Prokka|MAABMJFE_5); gnlProkkaMAABMJFE_6 (original name was: gnl|Prokka|MAABMJFE_6); gnlProkkaMAABMJFE_7 (original name was: gnl|Prokka|MAABMJFE_7); gnlProkkaMAABMJFE_8 (original name was: gnl|Prokka|MAABMJFE_8); gnlProkkaMAABMJFE_9 (original name was: gnl|Prokka|MAABMJFE_9); gnlProkkaMAABMJFE_10 (original name was: gnl|Prokka|MAABMJFE_10); gnlProkkaMAABMJFE_11 (original name was: gnl|Prokka|MAABMJFE_11); gnlProkkaMAABMJFE_13 (original name was: gnl|Prokka|MAABMJFE_13); gnlProkkaMAABMJFE_15 (original name was: gnl|Prokka|MAABMJFE_15); gnlProkkaMAABMJFE_16 (original name was: gnl|Prokka|MAABMJFE_16); gnlProkkaMAABMJFE_17 (original name was: gnl|Prokka|MAABMJFE_17); gnlProkkaMAABMJFE_18 (original name was: gnl|Prokka|MAABMJFE_18); gnlProkkaMAABMJFE_19 (original name was: gnl|Prokka|MAABMJFE_19); gnlProkkaMAABMJFE_20 (original name was: gnl|Prokka|MAABMJFE_20); gnlProkkaMAABMJFE_21 (original name was: gnl|Prokka|MAABMJFE_21); gnlProkkaMAABMJFE_22 (original name was: gnl|Prokka|MAABMJFE_22); gnlProkkaMAABMJFE_23 (original name was: gnl|Prokka|MAABMJFE_23); gnlProkkaMAABMJFE_24 (original name was: gnl|Prokka|MAABMJFE_24); gnlProkkaMAABMJFE_25 (original name was: gnl|Prokka|MAABMJFE_25); gnlProkkaMAABMJFE_26 (original name was: gnl|Prokka|MAABMJFE_26); gnlProkkaMAABMJFE_27 (original name was: gnl|Prokka|MAABMJFE_27); gnlProkkaMAABMJFE_28 (original name was: gnl|Prokka|MAABMJFE_28); gnlProkkaMAABMJFE_29 (original name was: gnl|Prokka|MAABMJFE_29); gnlProkkaMAABMJFE_30 (original name was: gnl|Prokka|MAABMJFE_30); gnlProkkaMAABMJFE_31 (original name was: gnl|Prokka|MAABMJFE_31); gnlProkkaMAABMJFE_32 (original name was: gnl|Prokka|MAABMJFE_32); gnlProkkaMAABMJFE_33 (original name was: gnl|Prokka|MAABMJFE_33); gnlProkkaMAABMJFE_34 (original name was: gnl|Prokka|MAABMJFE_34); gnlProkkaMAABMJFE_35 (original name was: gnl|Prokka|MAABMJFE_35); gnlProkkaMAABMJFE_36 (original name was: gnl|Prokka|MAABMJFE_36); gnlProkkaMAABMJFE_37 (original name was: gnl|Prokka|MAABMJFE_37); gnlProkkaMAABMJFE_38 (original name was: gnl|Prokka|MAABMJFE_38); gnlProkkaMAABMJFE_40 (original name was: gnl|Prokka|MAABMJFE_40); gnlProkkaMAABMJFE_41 (original name was: gnl|Prokka|MAABMJFE_41); gnlProkkaMAABMJFE_42 (original name was: gnl|Prokka|MAABMJFE_42); gnlProkkaMAABMJFE_43 (original name was: gnl|Prokka|MAABMJFE_43); gnlProkkaMAABMJFE_44 (original name was: gnl|Prokka|MAABMJFE_44); gnlProkkaMAABMJFE_45 (original name was: gnl|Prokka|MAABMJFE_45); gnlProkkaMAABMJFE_46 (original name was: gnl|Prokka|MAABMJFE_46); gnlProkkaMAABMJFE_47 (original name was: gnl|Prokka|MAABMJFE_47); gnlProkkaMAABMJFE_48 (original name was: gnl|Prokka|MAABMJFE_48)

Compact view

gnlProkkaMAABMJFE_12 - Region 1 - T3PKS

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Location: 58,232 - 84,095 nt. (total: 25,864 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMAABMJFE_14 - Region 1 - RiPP-like

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Location: 70,289 - 80,048 nt. (total: 9,760 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMAABMJFE_39 - Region 1 - RiPP-like

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Location: 1 - 5,739 nt. (total: 5,739 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.