Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_001044025.1	Lacticaseibacillus rhamnosus	Lr108	SAMN03196652	-	-	Homo sapiens	0	0	0	2	2.00
2	GCA_001656845.1	Lacticaseibacillus rhamnosus	Lrh5	SAMN03196630	-	-	Homo sapiens	0	0	0	2	2.00
3	GCA_030034775.1	Lacticaseibacillus rhamnosus	k32	SAMN34474297	2009-10-10	Russia: Tver	Homo sapiens	816	0	0	1	1.00
4	GCA_000735255.1	Lacticaseibacillus rhamnosus K32	K32	SAMN02840977	2007-09	Russia: Central Russia	Homo sapiens	819	0	0	2	2.00
5	GCA_024610975.1	Lacticaseibacillus rhamnosus	VHProbi M14	SAMN27397804	2021-01-25	China:Qingdao	Homo sapiens	819	0	0	1	1.00
6	GCA_025189415.1	Lacticaseibacillus rhamnosus	CIRM-BIA 780	SAMN10365511	1992	France	-	819	0	0	2	2.00
7	GCA_025189475.1	Lacticaseibacillus rhamnosus	CIRM-BIA 2131	SAMN10365509	1987	Egypt	-	819	0	0	2	2.00
8	GCA_025189505.1	Lacticaseibacillus rhamnosus	CIRM-BIA 2132	SAMN10365507	1987	Egypt	-	819	0	0	2	2.00
9	GCA_025212175.1	Lacticaseibacillus rhamnosus	CIRM-BIA 777	SAMN10365476	1989	Spain	-	819	0	0	2	2.00
10	GCA_030227945.1	Lacticaseibacillus rhamnosus	UMB8035B	SAMN35153937	-	USA: Maywood, IL	Homo sapiens	821	0	0	2	2.00
11	GCA_030233995.1	Lacticaseibacillus rhamnosus	UMB8035A	SAMN35153899	-	USA: Maywood, IL	Homo sapiens	821	0	0	2	2.00
12	GCA_039654095.1	Lacticaseibacillus rhamnosus	S22825	SAMN38984026	2008-10-31	China: Heilongjiang	-	822	0	0	1	1.00
13	GCA_037118725.1	Lacticaseibacillus rhamnosus	VTCC 12819	SAMN40295153	2021-04	Viet Nam: Ha Noi	cow	823	0	0	2	2.00
14	GCA_039615465.1	Lacticaseibacillus rhamnosus	SM 4.3	SAMN41068733	2021-03	Viet Nam: Ha Noi	-	823	0	0	2	2.00
15	GCA_040446565.1	Lacticaseibacillus rhamnosus	MY-1	SAMN40988818	2021-10-20	China	-	823	0	0	2	2.00
16	GCA_000418475.1	Lacticaseibacillus rhamnosus LOCK900	LOCK900	SAMN02603328	-	-	-	831	0	0	1	1.00
17	GCA_002238035.1	Lacticaseibacillus rhamnosus	IBL027	SAMN06676198	2013-04-16	Argentina: Tucuman	Homo sapiens	831	0	0	2	2.00
18	GCA_002406705.1	Lacticaseibacillus rhamnosus	B1	SAMN07665580	2016-11-07	Canada: Montreal, Quebec	-	831	0	0	2	2.00
19	GCA_013167115.1	Lacticaseibacillus rhamnosus	LV108	SAMN14943671	2002-09-20	China	Homo sapiens	831	0	0	1	1.00
20	GCA_013342125.1	Lacticaseibacillus rhamnosus	OSU-PECh-69	SAMN14987738	-	-	-	831	0	0	2	2.00
21	GCA_014212185.1	Lacticaseibacillus rhamnosus	CBC-LR1	SAMN15749032	2001	Bulgaria	-	831	0	0	2	2.00
22	GCA_016599675.2	Lacticaseibacillus rhamnosus	B6	SAMN17141195	2015-02-01	Bulgaria	-	831	0	0	1	1.00
23	GCA_025189305.1	Lacticaseibacillus rhamnosus	CIRM-BIA 784	SAMN10365516	1999	France	-	831	0	0	2	2.00
24	GCA_025189365.1	Lacticaseibacillus rhamnosus	CIRM-BIA 930	SAMN10365514	2001	France	-	831	0	0	2	2.00
25	GCA_025189385.1	Lacticaseibacillus rhamnosus	CIRM-BIA 1112	SAMN10365515	2001	France	-	831	0	0	2	2.00
26	GCA_038039235.1	Lacticaseibacillus rhamnosus	ICIS25	SAMN40744994	2020-08-07	Russia: Orenburg region, Orenburg district, Nizhnyaya Pavlovka village	-	831	0	0	2	2.00
27	GCA_039857935.1	Lacticaseibacillus rhamnosus	TCI366	SAMN41415636	2019-06-11	Taiwan: Taipei	Homo sapiens	831	0	0	1	1.00
28	GCA_001831235.1	Lacticaseibacillus rhamnosus	ASCC 3029	SAMN05915695	1997	-	-	832	0	0	2	2.00
29	GCA_025189405.1	Lacticaseibacillus rhamnosus	CIRM-BIA 774	SAMN10365513	1964	France	-	832	0	0	2	2.00
30	GCA_025189545.1	Lacticaseibacillus rhamnosus	CIRM-BIA 910	SAMN10365506	1987	Egypt	-	832	0	0	2	2.00
31	GCA_000235785.2	Lacticaseibacillus rhamnosus R0011	R0011	SAMN02469944	1976	Canada	-	833	0	0	2	2.00
32	GCA_000235865.1	Lacticaseibacillus rhamnosus ATCC 21052	ATCC 21052	SAMN02299451	-	-	Homo sapiens	833	0	0	2	2.00
33	GCA_002076955.1	Lacticaseibacillus rhamnosus	Pen	SAMN06196449	2005	Poland	Homo sapiens	833	0	0	1	1.00
34	GCA_003052925.1	Lacticaseibacillus rhamnosus	DS18_11	SAMN06464111	2016-11-05	USA:MD	Homo sapiens	833	0	0	2	2.00
35	GCA_003052985.1	Lacticaseibacillus rhamnosus	DS3_11	SAMN05864073	2016-04-20	USA:MD	Homo sapiens	833	0	0	2	2.00
36	GCA_003061665.1	Lacticaseibacillus rhamnosus	DS12_11	SAMN05864076	2015-11-19	USA:MD	Homo sapiens	833	0	0	2	2.00
37	GCA_003573615.1	Lacticaseibacillus rhamnosus	ARJD	SAMN08793894	2016	India: Kolhapur	-	833	0	0	2	2.00
38	GCA_032465995.1	Lacticaseibacillus rhamnosus	LMG 10768	SAMN37405141	1988	Sweden	-	833	0	0	1	1.00
39	GCA_001657165.1	Lacticaseibacillus rhamnosus	Lrh10	SAMN03196618	-	-	-	834	0	0	2	2.00
40	GCA_003061625.1	Lacticaseibacillus rhamnosus	DS9_11	SAMN05864075	2016-01-31	USA:MD	Homo sapiens	834	0	0	2	2.00
41	GCA_016887825.1	Lacticaseibacillus rhamnosus	1473	SAMN17562093	2007-07-29	Italy	-	834	1	0	2	2.24
42	GCA_018966895.1	Lacticaseibacillus rhamnosus	F	SAMN19670540	2010-12-22	Russia: Moscow	Homo sapiens	834	0	0	2	2.00
43	GCA_000932035.1	Lacticaseibacillus rhamnosus	CLS17	SAMN03120606	2012-04-04	Kazakhstan: Astana	Homo sapiens	835	0	0	2	2.00
44	GCA_025189265.1	Lacticaseibacillus rhamnosus	CIRM-BIA 1107	SAMN10365520	1978	France	-	835	0	0	2	2.00
45	GCA_001656655.1	Lacticaseibacillus rhamnosus	Lrh22	SAMN03196648	-	-	Homo sapiens	836	0	0	2	2.00
46	GCA_001656915.1	Lacticaseibacillus rhamnosus	Lrh3	SAMN03196636	-	-	-	841	0	0	2	2.00
47	GCA_001044095.1	Lacticaseibacillus rhamnosus	Lr032	SAMN03196659	-	-	Homo sapiens	842	0	0	3	3.00
48	GCA_025189465.1	Lacticaseibacillus rhamnosus	CIRM-BIA 913	SAMN10365510	1987	Egypt	-	843	0	0	2	2.00
49	GCA_025189525.1	Lacticaseibacillus rhamnosus	CIRM-BIA 2133	SAMN10365508	1987	Egypt	-	843	0	0	2	2.00
50	GCA_001656575.1	Lacticaseibacillus rhamnosus	Lrh31	SAMN03196651	-	-	Homo sapiens	845	0	0	2	2.00
51	GCA_001368735.1	Lacticaseibacillus rhamnosus	BPL15	SAMEA3158499	-	-	-	849	0	0	1	1.00
52	GCA_008727835.1	Lacticaseibacillus rhamnosus	hsryfm 1301	SAMN12793868	2013-07-13	China	Homo sapiens	849	0	0	1	1.00
53	GCA_028878145.1	Lacticaseibacillus rhamnosus	N1110	SAMN23708203	2012-01-30	Italy	Homo sapiens	850	0	0	2	2.00
54	GCA_001044075.1	Lacticaseibacillus rhamnosus	Lr138	SAMN03196654	-	-	-	851	0	0	2	2.00
55	GCA_000801045.1	Lacticaseibacillus rhamnosus	116	SAMN03154065	1994	Russia	Homo sapiens	852	0	0	2	2.00
56	GCA_008017355.1	Lacticaseibacillus rhamnosus	Vahe	SAMN12558187	-	-	Homo sapiens	852	0	0	2	2.00
57	GCA_021300595.1	Lacticaseibacillus rhamnosus	ICIS-627	SAMN24291469	2014	Russia: Orenburg	Homo sapiens	852	0	0	2	2.00
58	GCA_027857655.1	Lacticaseibacillus rhamnosus	lbd85-1	SAMN32612941	2013/2015	Georgia	-	852	0	0	2	2.00
59	GCA_027857665.1	Lacticaseibacillus rhamnosus	lbd330	SAMN32612940	2013/2015	Georgia	-	852	0	0	2	2.00
60	GCA_027857695.1	Lacticaseibacillus rhamnosus	lbr152	SAMN32612938	2013/2015	Georgia	-	852	0	0	2	2.00
61	GCA_027857715.1	Lacticaseibacillus rhamnosus	lbr105	SAMN32612935	2013/2015	Georgia	-	852	0	0	2	2.00
62	GCA_027857735.1	Lacticaseibacillus rhamnosus	lbr108	SAMN32612936	2013/2015	Georgia	-	852	0	0	2	2.00
63	GCA_027857765.1	Lacticaseibacillus rhamnosus	lbr154	SAMN32612939	2013/2015	Georgia	-	852	0	0	2	2.00
64	GCA_027857795.1	Lacticaseibacillus rhamnosus	lbr136	SAMN32612937	2013/2015	Georgia	-	852	0	0	2	2.00
65	GCA_028322835.1	Lacticaseibacillus rhamnosus	2217st1_F11_2217SCRN_200827	SAMN31322661	2020-08-27	USA	Homo sapiens	852	0	0	2	2.00
66	GCA_032465875.1	Lacticaseibacillus rhamnosus	LMG 23551	SAMN37405147	1990	United Kingdom	-	852	0	0	1	1.00
67	GCA_001656685.1	Lacticaseibacillus rhamnosus	Lrh19	SAMN03196650	-	-	Homo sapiens	853	0	0	2	2.00
68	GCA_001656765.1	Lacticaseibacillus rhamnosus	Lrh34	SAMN03196621	-	-	-	853	0	0	2	2.00
69	GCA_001657195.1	Lacticaseibacillus rhamnosus	Lrh33	SAMN03196620	-	-	-	853	0	0	2	2.00
70	GCA_004125465.1	Lacticaseibacillus rhamnosus	LR-GG-MoProbi	SAMN08176639	2017-03	Taiwan: Taoyuan	Homo sapiens	853	0	0	2	2.00
71	GCA_028321835.1	Lacticaseibacillus rhamnosus	1001095st1_A7_1001095A_150126	SAMN31322648	2015-01-26	USA	Homo sapiens	853	0	0	2	2.00
72	GCA_028322705.1	Lacticaseibacillus rhamnosus	1001095st1_F3_1001095A_150126	SAMN31322650	2015-01-26	USA	Homo sapiens	853	0	0	2	2.00
73	GCA_028322725.1	Lacticaseibacillus rhamnosus	1001095st1_F3_1001254B_151014	SAMN31322651	2015-10-14	USA	Homo sapiens	853	0	0	2	2.00
74	GCA_028322785.1	Lacticaseibacillus rhamnosus	1001095st1_F6_1001095A_150126	SAMN31322652	2015-01-26	USA	Homo sapiens	853	0	0	2	2.00
75	GCA_030269985.1	Lacticaseibacillus rhamnosus	-	SAMD00592140	-	-	-	853	0	0	2	2.00
76	GCA_032465895.1	Lacticaseibacillus rhamnosus	LMG 23327	SAMN37405146	2005	-	-	853	0	0	1	1.00
77	GCA_032465935.1	Lacticaseibacillus rhamnosus	LMG 19717	SAMN37405144	1999	Denmark	-	853	0	0	1	1.00
78	GCA_036595825.1	Lacticaseibacillus rhamnosus	SD11	SAMN31309354	2011	Thailand	Homo sapiens	853	0	0	2	2.00
79	GCA_036595865.1	Lacticaseibacillus rhamnosus	SD4	SAMN31309353	2011	Thailand	Homo sapiens	853	0	0	2	2.00
80	GCA_001656735.1	Lacticaseibacillus rhamnosus	Lrh11	SAMN03196637	-	-	Homo sapiens	854	0	0	2	2.00
81	GCA_001656925.1	Lacticaseibacillus rhamnosus	Lrh28	SAMN03196643	-	-	Homo sapiens	854	0	0	2	2.00
82	GCA_002287945.1	Lacticaseibacillus rhamnosus DSM 14870	DSM 14870	SAMN07605138	-	-	-	854	0	0	1	1.00
83	GCA_002848015.1	Lacticaseibacillus rhamnosus	UMB0004	SAMN08193701	2015	USA: Maywood, IL	Homo sapiens	854	0	0	2	2.00
84	GCA_003046115.1	Lacticaseibacillus rhamnosus	LR2	SAMN08801722	2017	Turkey	-	854	0	0	2	2.00
85	GCA_013377685.1	Lacticaseibacillus rhamnosus	QC	SAMN15340092	2017-06	China:Hubei	chicken	854	0	0	2	2.00
86	GCA_015377485.1	Lacticaseibacillus rhamnosus	TK-F8B	SAMN13106275	2019-02-26	China:Zhejiang province	-	854	0	0	1	1.00
87	GCA_018458775.1	Lacticaseibacillus rhamnosus	RAB2019A	SAMN18473070	-	USA: St. Louis	Homo sapiens	854	1	0	2	2.24
88	GCA_022509255.1	Lacticaseibacillus rhamnosus	QAULRN2	SAMN20114179	2018-01-01/2021-01-01	Pakistan: Islamabad	-	854	1	0	2	2.24
89	GCA_028321085.1	Lacticaseibacillus rhamnosus	1001095st1_C6_1001095A_150126	SAMN31322649	2015-01-26	USA	Homo sapiens	854	0	0	2	2.00
90	GCA_030217425.1	Lacticaseibacillus rhamnosus	UMB1351A	SAMN34996519	-	USA: Maywood, IL	Homo sapiens	854	0	0	2	2.00
91	GCA_030224725.1	Lacticaseibacillus rhamnosus	UMB1351B	SAMN34998765	-	USA: Maywood, IL	Homo sapiens	854	0	0	2	2.00
92	GCA_000173255.3	Lacticaseibacillus rhamnosus HN001	HN001	SAMN02469790	-	-	-	855	0	0	1	1.00
93	GCA_001657135.1	Lacticaseibacillus rhamnosus	Lrh13	SAMN03196647	-	-	Homo sapiens	855	0	0	2	2.00
94	GCA_001988935.1	Lacticaseibacillus rhamnosus	BFE5264	SAMN04404358	2004	Kenya	-	855	0	0	1	1.00
95	GCA_002286235.1	Lacticaseibacillus rhamnosus	LR5	SAMN05631078	2015-08-24	South Korea: Seoul	Homo sapiens	855	0	0	1	1.00
96	GCA_002406715.1	Lacticaseibacillus rhamnosus	P5	SAMN07665579	2016-11-07	Canada: Montreal, Quebec	-	855	0	0	2	2.00
97	GCA_002406745.1	Lacticaseibacillus rhamnosus	P4	SAMN07665578	2016-11-07	Canada: Montreal, Quebec	-	855	0	0	2	2.00
98	GCA_002406795.1	Lacticaseibacillus rhamnosus	P1	SAMN07665575	2016-11-07	Canada: Montreal, Quebec	-	855	0	0	2	2.00
99	GCA_018449495.1	Lacticaseibacillus rhamnosus	Lr-G14	SAMN18897175	2011-05	China:Tibet	-	855	0	0	2	2.00
100	GCA_022802735.1	Lacticaseibacillus rhamnosus	3189-SD0197	SAMN17109604	2015-10-28	Australia: Queensland	Homo sapiens	855	0	0	2	2.00