GCA_001656895.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFADDGFJE_3 (original name was: gnl|Prokka|FADDGFJE_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	111,130	118,329

gnlProkkaFADDGFJE_5 (original name was: gnl|Prokka|FADDGFJE_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	595	10,780

gnlProkkaFADDGFJE_29 (original name was: gnl|Prokka|FADDGFJE_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	T3PKS	8,431	47,397

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	111,130	118,329
Region 5.1	RiPP-like	595	10,780
Region 29.1	T3PKS	8,431	47,397

No secondary metabolite regions were found in these records:: gnlProkkaFADDGFJE_1 (original name was: gnl|Prokka|FADDGFJE_1); gnlProkkaFADDGFJE_2 (original name was: gnl|Prokka|FADDGFJE_2); gnlProkkaFADDGFJE_4 (original name was: gnl|Prokka|FADDGFJE_4); gnlProkkaFADDGFJE_6 (original name was: gnl|Prokka|FADDGFJE_6); gnlProkkaFADDGFJE_7 (original name was: gnl|Prokka|FADDGFJE_7); gnlProkkaFADDGFJE_8 (original name was: gnl|Prokka|FADDGFJE_8); gnlProkkaFADDGFJE_9 (original name was: gnl|Prokka|FADDGFJE_9); gnlProkkaFADDGFJE_10 (original name was: gnl|Prokka|FADDGFJE_10); gnlProkkaFADDGFJE_11 (original name was: gnl|Prokka|FADDGFJE_11); gnlProkkaFADDGFJE_12 (original name was: gnl|Prokka|FADDGFJE_12); gnlProkkaFADDGFJE_13 (original name was: gnl|Prokka|FADDGFJE_13); gnlProkkaFADDGFJE_14 (original name was: gnl|Prokka|FADDGFJE_14); gnlProkkaFADDGFJE_15 (original name was: gnl|Prokka|FADDGFJE_15); gnlProkkaFADDGFJE_16 (original name was: gnl|Prokka|FADDGFJE_16); gnlProkkaFADDGFJE_17 (original name was: gnl|Prokka|FADDGFJE_17); gnlProkkaFADDGFJE_18 (original name was: gnl|Prokka|FADDGFJE_18); gnlProkkaFADDGFJE_19 (original name was: gnl|Prokka|FADDGFJE_19); gnlProkkaFADDGFJE_20 (original name was: gnl|Prokka|FADDGFJE_20); gnlProkkaFADDGFJE_21 (original name was: gnl|Prokka|FADDGFJE_21); gnlProkkaFADDGFJE_22 (original name was: gnl|Prokka|FADDGFJE_22); gnlProkkaFADDGFJE_23 (original name was: gnl|Prokka|FADDGFJE_23); gnlProkkaFADDGFJE_24 (original name was: gnl|Prokka|FADDGFJE_24); gnlProkkaFADDGFJE_25 (original name was: gnl|Prokka|FADDGFJE_25); gnlProkkaFADDGFJE_26 (original name was: gnl|Prokka|FADDGFJE_26); gnlProkkaFADDGFJE_27 (original name was: gnl|Prokka|FADDGFJE_27); gnlProkkaFADDGFJE_28 (original name was: gnl|Prokka|FADDGFJE_28); gnlProkkaFADDGFJE_30 (original name was: gnl|Prokka|FADDGFJE_30); gnlProkkaFADDGFJE_31 (original name was: gnl|Prokka|FADDGFJE_31); gnlProkkaFADDGFJE_32 (original name was: gnl|Prokka|FADDGFJE_32); gnlProkkaFADDGFJE_33 (original name was: gnl|Prokka|FADDGFJE_33); gnlProkkaFADDGFJE_34 (original name was: gnl|Prokka|FADDGFJE_34); gnlProkkaFADDGFJE_35 (original name was: gnl|Prokka|FADDGFJE_35); gnlProkkaFADDGFJE_36 (original name was: gnl|Prokka|FADDGFJE_36); gnlProkkaFADDGFJE_37 (original name was: gnl|Prokka|FADDGFJE_37); gnlProkkaFADDGFJE_38 (original name was: gnl|Prokka|FADDGFJE_38); gnlProkkaFADDGFJE_39 (original name was: gnl|Prokka|FADDGFJE_39); gnlProkkaFADDGFJE_40 (original name was: gnl|Prokka|FADDGFJE_40); gnlProkkaFADDGFJE_41 (original name was: gnl|Prokka|FADDGFJE_41); gnlProkkaFADDGFJE_42 (original name was: gnl|Prokka|FADDGFJE_42); gnlProkkaFADDGFJE_43 (original name was: gnl|Prokka|FADDGFJE_43); gnlProkkaFADDGFJE_44 (original name was: gnl|Prokka|FADDGFJE_44); gnlProkkaFADDGFJE_45 (original name was: gnl|Prokka|FADDGFJE_45); gnlProkkaFADDGFJE_46 (original name was: gnl|Prokka|FADDGFJE_46); gnlProkkaFADDGFJE_47 (original name was: gnl|Prokka|FADDGFJE_47); gnlProkkaFADDGFJE_48 (original name was: gnl|Prokka|FADDGFJE_48); gnlProkkaFADDGFJE_49 (original name was: gnl|Prokka|FADDGFJE_49); gnlProkkaFADDGFJE_50 (original name was: gnl|Prokka|FADDGFJE_50); gnlProkkaFADDGFJE_51 (original name was: gnl|Prokka|FADDGFJE_51); gnlProkkaFADDGFJE_52 (original name was: gnl|Prokka|FADDGFJE_52); gnlProkkaFADDGFJE_53 (original name was: gnl|Prokka|FADDGFJE_53); gnlProkkaFADDGFJE_54 (original name was: gnl|Prokka|FADDGFJE_54); gnlProkkaFADDGFJE_55 (original name was: gnl|Prokka|FADDGFJE_55); gnlProkkaFADDGFJE_56 (original name was: gnl|Prokka|FADDGFJE_56); gnlProkkaFADDGFJE_57 (original name was: gnl|Prokka|FADDGFJE_57); gnlProkkaFADDGFJE_58 (original name was: gnl|Prokka|FADDGFJE_58); gnlProkkaFADDGFJE_59 (original name was: gnl|Prokka|FADDGFJE_59); gnlProkkaFADDGFJE_60 (original name was: gnl|Prokka|FADDGFJE_60); gnlProkkaFADDGFJE_61 (original name was: gnl|Prokka|FADDGFJE_61); gnlProkkaFADDGFJE_62 (original name was: gnl|Prokka|FADDGFJE_62); gnlProkkaFADDGFJE_63 (original name was: gnl|Prokka|FADDGFJE_63); gnlProkkaFADDGFJE_64 (original name was: gnl|Prokka|FADDGFJE_64); gnlProkkaFADDGFJE_65 (original name was: gnl|Prokka|FADDGFJE_65); gnlProkkaFADDGFJE_66 (original name was: gnl|Prokka|FADDGFJE_66); gnlProkkaFADDGFJE_67 (original name was: gnl|Prokka|FADDGFJE_67); gnlProkkaFADDGFJE_68 (original name was: gnl|Prokka|FADDGFJE_68); gnlProkkaFADDGFJE_69 (original name was: gnl|Prokka|FADDGFJE_69); gnlProkkaFADDGFJE_70 (original name was: gnl|Prokka|FADDGFJE_70); gnlProkkaFADDGFJE_71 (original name was: gnl|Prokka|FADDGFJE_71); gnlProkkaFADDGFJE_72 (original name was: gnl|Prokka|FADDGFJE_72); gnlProkkaFADDGFJE_73 (original name was: gnl|Prokka|FADDGFJE_73); gnlProkkaFADDGFJE_74 (original name was: gnl|Prokka|FADDGFJE_74); gnlProkkaFADDGFJE_75 (original name was: gnl|Prokka|FADDGFJE_75); gnlProkkaFADDGFJE_76 (original name was: gnl|Prokka|FADDGFJE_76); gnlProkkaFADDGFJE_77 (original name was: gnl|Prokka|FADDGFJE_77)

Compact view

gnlProkkaFADDGFJE_3 - Region 1 - RiPP-like

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Location: 111,130 - 118,329 nt. (total: 7,200 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFADDGFJE_5 - Region 1 - RiPP-like

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Location: 595 - 10,780 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFADDGFJE_29 - Region 1 - T3PKS

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Location: 8,431 - 47,397 nt. (total: 38,967 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.