GCA_002027355.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOEJMFIGG_2 (original name was: gnl|Prokka|OEJMFIGG_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T3PKS	35,185	76,357

gnlProkkaOEJMFIGG_11 (original name was: gnl|Prokka|OEJMFIGG_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	1,211	11,396

gnlProkkaOEJMFIGG_14 (original name was: gnl|Prokka|OEJMFIGG_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	1	6,577

Region	Type	From	To	Similarity
Region 2.1	T3PKS	35,185	76,357
Region 11.1	RiPP-like	1,211	11,396
Region 14.1	RiPP-like	1	6,577

No secondary metabolite regions were found in these records:: gnlProkkaOEJMFIGG_1 (original name was: gnl|Prokka|OEJMFIGG_1); gnlProkkaOEJMFIGG_3 (original name was: gnl|Prokka|OEJMFIGG_3); gnlProkkaOEJMFIGG_4 (original name was: gnl|Prokka|OEJMFIGG_4); gnlProkkaOEJMFIGG_5 (original name was: gnl|Prokka|OEJMFIGG_5); gnlProkkaOEJMFIGG_6 (original name was: gnl|Prokka|OEJMFIGG_6); gnlProkkaOEJMFIGG_7 (original name was: gnl|Prokka|OEJMFIGG_7); gnlProkkaOEJMFIGG_8 (original name was: gnl|Prokka|OEJMFIGG_8); gnlProkkaOEJMFIGG_9 (original name was: gnl|Prokka|OEJMFIGG_9); gnlProkkaOEJMFIGG_10 (original name was: gnl|Prokka|OEJMFIGG_10); gnlProkkaOEJMFIGG_12 (original name was: gnl|Prokka|OEJMFIGG_12); gnlProkkaOEJMFIGG_13 (original name was: gnl|Prokka|OEJMFIGG_13); gnlProkkaOEJMFIGG_15 (original name was: gnl|Prokka|OEJMFIGG_15); gnlProkkaOEJMFIGG_16 (original name was: gnl|Prokka|OEJMFIGG_16); gnlProkkaOEJMFIGG_17 (original name was: gnl|Prokka|OEJMFIGG_17); gnlProkkaOEJMFIGG_18 (original name was: gnl|Prokka|OEJMFIGG_18); gnlProkkaOEJMFIGG_19 (original name was: gnl|Prokka|OEJMFIGG_19); gnlProkkaOEJMFIGG_20 (original name was: gnl|Prokka|OEJMFIGG_20); gnlProkkaOEJMFIGG_21 (original name was: gnl|Prokka|OEJMFIGG_21); gnlProkkaOEJMFIGG_22 (original name was: gnl|Prokka|OEJMFIGG_22); gnlProkkaOEJMFIGG_23 (original name was: gnl|Prokka|OEJMFIGG_23); gnlProkkaOEJMFIGG_24 (original name was: gnl|Prokka|OEJMFIGG_24); gnlProkkaOEJMFIGG_25 (original name was: gnl|Prokka|OEJMFIGG_25); gnlProkkaOEJMFIGG_26 (original name was: gnl|Prokka|OEJMFIGG_26)

Compact view

gnlProkkaOEJMFIGG_2 - Region 1 - T3PKS

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Location: 35,185 - 76,357 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOEJMFIGG_11 - Region 1 - RiPP-like

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Location: 1,211 - 11,396 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOEJMFIGG_14 - Region 1 - RiPP-like

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Location: 1 - 6,577 nt. (total: 6,577 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.