Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_002128605.1	Limosilactobacillus reuteri	KLR2007	SAMN05751489	2015-03-08	South Korea	pig	0	2	0	1	2.24
2	GCA_002128655.1	Limosilactobacillus reuteri	KLR3004	SAMN05751494	2015-06-24	South Korea	pig	12	2	0	1	2.24
3	GCA_002128585.1	Limosilactobacillus reuteri	KLR2003	SAMN05751485	2014-11-13	South Korea	pig	15	5	0	1	5.10
4	GCA_002128745.1	Limosilactobacillus reuteri	KLR2008	SAMN05751490	2015-03-08	South Korea	pig	16	2	0	1	2.24
5	GCA_002128555.1	Limosilactobacillus reuteri	KLR2002	SAMN05751484	2014-11-13	South Korea	pig	20	6	0	1	6.08
6	GCA_002128685.1	Limosilactobacillus reuteri	KLR3005	SAMN05751495	2015-06-24	South Korea	pig	239	4	0	1	4.12
7	GCA_046938015.1	Limosilactobacillus reuteri subsp. suis	M826A	SAMN35847958	2019	Czech Republic	domestic pig	239	1	0	1	1.41
8	GCA_036621875.1	Limosilactobacillus reuteri	lp167-67	SAMEA3220430	-	-	-	244	1	0	1	1.41
9	GCA_003719715.1	Limosilactobacillus reuteri	UBLRU-87	SAMN10246080	2008-10-16	India:Hyderabad	-	246	0	0	0	0.00
10	GCA_002128525.1	Limosilactobacillus reuteri	KLR1004	SAMN05751482	2006-06-20	South Korea	pig	251	10	0	1	10.05
11	GCA_000236455.2	Limosilactobacillus reuteri subsp. suis	ATCC 53608	SAMEA2272605	-	-	-	252	0	0	0	0.00
12	GCA_020412465.1	Limosilactobacillus reuteri	19-E-6	SAMN21920643	2020-10-19	United Kingdom: England	Sus scrofa	252	0	0	0	0.00
13	GCA_020412485.1	Limosilactobacillus reuteri	19-E-3	SAMN21920642	2020-10-19	United Kingdom: England	Sus scrofa	252	0	0	0	0.00
14	GCA_046937795.1	Limosilactobacillus reuteri subsp. suis	M963A	SAMN35847961	2019	Czech Republic	domestic pig	252	1	0	1	1.41
15	GCA_046938255.1	Limosilactobacillus reuteri subsp. suis	M767A	SAMN35847975	2019	Czech Republic	domestic pig	252	0	0	1	1.00
16	GCA_001618905.1	Limosilactobacillus reuteri	ZLR003	SAMN03879966	2007-05	China: Beijing	pig	257	3	0	0	3.00
17	GCA_046938595.1	Limosilactobacillus reuteri subsp. suis	M721A	SAMN35847959	2019	Czech Republic	domestic pig	257	1	0	1	1.41
18	GCA_046937825.1	Limosilactobacillus reuteri subsp. suis	M838A	SAMN35847977	2019	Czech Republic	domestic pig	258	0	0	1	1.00
19	GCA_045037805.1	Limosilactobacillus reuteri	ZY15	SAMN44596808	2021-05-15	China:Feed Research Institute, Beijing	swine	261	2	0	0	2.00
20	GCA_046938415.1	Limosilactobacillus reuteri subsp. suis	M755A	SAMN35847968	2019	Czech Republic	domestic pig	262	2	0	1	2.24
21	GCA_000410995.1	Limosilactobacillus reuteri I5007	I5007	SAMN02603119	-	-	pigs	264	2	0	0	2.00
22	GCA_002128755.1	Limosilactobacillus reuteri	KLR2006	SAMN05751488	2015-03-08	South Korea	pig	264	4	0	1	4.12
23	GCA_046938155.1	Limosilactobacillus reuteri subsp. suis	M778A	SAMN35847980	2019	Czech Republic	domestic pig	264	0	0	1	1.00
24	GCA_046938195.1	Limosilactobacillus reuteri subsp. suis	M774A	SAMN35847979	2019	Czech Republic	domestic pig	265	1	0	1	1.41
25	GCA_046938025.1	Limosilactobacillus reuteri subsp. suis	M824A	SAMN35847956	2019	Czech Republic	domestic pig	266	0	0	1	1.00
26	GCA_046938475.1	Limosilactobacillus reuteri subsp. suis	M726A	SAMN35847960	2019	Czech Republic	domestic pig	266	0	0	1	1.00
27	GCA_046938395.1	Limosilactobacillus reuteri subsp. suis	M744A	SAMN35847965	2019	Czech Republic	domestic pig	267	0	0	1	1.00
28	GCA_002128635.1	Limosilactobacillus reuteri	KLR3003	SAMN05751493	2015-05-06	South Korea	pig	268	2	0	1	2.24
29	GCA_046937655.1	Limosilactobacillus reuteri subsp. suis	M984A	SAMN35847973	2019	Czech Republic	domestic pig	268	3	0	1	3.16
30	GCA_046937845.1	Limosilactobacillus reuteri subsp. suis	M978A	SAMN35847967	2019	Czech Republic	domestic pig	268	0	0	1	1.00
31	GCA_046937975.1	Limosilactobacillus reuteri subsp. suis	M825A	SAMN35847957	2019	Czech Republic	domestic pig	269	1	0	1	1.41
32	GCA_046937815.1	Limosilactobacillus reuteri subsp. suis	M966A	SAMN35847962	2019	Czech Republic	domestic pig	271	0	0	1	1.00
33	GCA_046938095.1	Limosilactobacillus reuteri subsp. suis	M833A	SAMN35847970	2019	Czech Republic	domestic pig	271	3	0	1	3.16
34	GCA_901971765.1	Limosilactobacillus reuteri	INIA P572	SAMEA5674231	2000	Spain	Sus scrofa domesticus	271	1	0	1	1.41
35	GCA_002128615.1	Limosilactobacillus reuteri	KLR3002	SAMN05751492	2015-05-06	South Korea	pig	272	2	0	1	2.24
36	GCA_046937715.1	Limosilactobacillus reuteri subsp. suis	M990A	SAMN35847974	2019	Czech Republic	domestic pig	272	3	0	1	3.16
37	GCA_046938365.1	Limosilactobacillus reuteri subsp. suis	M758A	SAMN35847971	2019	Czech Republic	domestic pig	272	3	0	1	3.16
38	GCA_046938495.1	Limosilactobacillus reuteri subsp. suis	M733A	SAMN35847963	2019	Czech Republic	domestic pig	272	0	0	1	1.00
39	GCA_002128715.1	Limosilactobacillus reuteri	KLR2004	SAMN05751486	2015-01-22	South Korea	pig	273	1	0	1	1.41
40	GCA_046938445.1	Limosilactobacillus reuteri subsp. suis	M746A	SAMN35847966	2019	Czech Republic	domestic pig	273	0	0	1	1.00
41	GCA_002128495.1	Limosilactobacillus reuteri	KLR2001	SAMN05751483	2014-11-13	South Korea	pig	275	2	0	1	2.24
42	GCA_026183435.1	Limosilactobacillus reuteri	BRD_L17	SAMN31580343	2022-08-12	South Korea:Kyungki	Canis lupus familiaris mixed breed	275	0	0	0	0.00
43	GCA_042464795.1	Limosilactobacillus reuteri	LDHa	SAMN43886048	2023-09-01	China:Guangzhou	-	275	0	0	0	0.00
44	GCA_042464815.1	Limosilactobacillus reuteri	LSHe	SAMN43882269	2023-09-01	China:Guangzhou	-	275	0	0	0	0.00
45	GCA_046937955.1	Limosilactobacillus reuteri subsp. suis	M832A	SAMN35847964	2019	Czech Republic	domestic pig	275	0	0	1	1.00
46	GCA_046938175.1	Limosilactobacillus reuteri subsp. suis	M770A	SAMN35847976	2019	Czech Republic	domestic pig	276	0	0	1	1.00
47	GCA_046938205.1	Limosilactobacillus reuteri subsp. suis	M773A	SAMN35847978	2019	Czech Republic	domestic pig	276	0	0	1	1.00
48	GCA_023896335.1	Limosilactobacillus reuteri	PH-3	SAMN28100809	2022-03	Russia	-	277	0	0	1	1.00
49	GCA_036621915.1	Limosilactobacillus reuteri	pg-3b	SAMEA3220433	-	-	-	277	1	0	1	1.41
50	GCA_036903235.1	Limosilactobacillus reuteri	TPC32	SAMN39454010	2023-03-21	China: Xizang	Tibetan pigs	277	2	0	0	2.00
51	GCA_013348825.1	Limosilactobacillus reuteri	AN417	SAMN15162791	2016-05-03	South Korea:Jeollabuk-do, Gimje-si	Sus scrofa domesticus	278	2	0	0	2.00
52	GCA_046938245.1	Limosilactobacillus reuteri subsp. suis	M751A	SAMN35847969	2019	Czech Republic	domestic pig	279	3	0	1	3.16
53	GCA_020785075.1	Limosilactobacillus reuteri	G_6_1	SAMN22258624	2013-03	USA:Nebraska	Gorilla	280	0	0	1	1.00
54	GCA_046937645.1	Limosilactobacillus reuteri subsp. suis	M981A	SAMN35847972	2019	Czech Republic	domestic pig	280	2	0	1	2.24
55	GCA_020784205.1	Limosilactobacillus reuteri	AG_2_7_1	SAMN22258666	2013-03	USA:Nebraska	Agile Gibbon	283	0	0	1	1.00
56	GCA_002128705.1	Limosilactobacillus reuteri	KLR4001	SAMN05751497	2015-01-22	South Korea	pig	285	2	0	1	2.24
57	GCA_020784975.1	Limosilactobacillus reuteri	6B	SAMN22258630	2015	Canada:Calgary	Mandrill	286	0	0	1	1.00
58	GCA_020784945.1	Limosilactobacillus reuteri	6C	SAMN22258631	2015	Canada:Calgary	Mandrill	287	0	0	1	1.00
59	GCA_020785215.1	Limosilactobacillus reuteri	21D	SAMN22258617	2015	Canada:Calgary	Japanese macaque	287	0	0	1	1.00
60	GCA_020785225.1	Limosilactobacillus reuteri	21B	SAMN22258616	2015	Canada:Calgary	Japanese macaque	287	0	0	1	1.00
61	GCA_020785275.1	Limosilactobacillus reuteri	21A	SAMN22258615	2015	Canada:Calgary	Japanese macaque	287	0	0	1	1.00
62	GCA_002128485.1	Limosilactobacillus reuteri	KLR1001	SAMN05751479	2006-06-20	South Korea	pig	288	3	0	1	3.16
63	GCA_006874665.1	Limosilactobacillus reuteri	YSJL-12	SAMN09453118	2013-07-05	China: Harbin	pig	288	2	0	0	2.00
64	GCA_022586935.1	Limosilactobacillus reuteri	PB2	SAMN26510415	2021-10-07	Canada: London Ontario	-	288	0	0	1	1.00
65	GCA_001889975.1	Limosilactobacillus reuteri	121	SAMN05788099	1999-01-01	Netherlands	pig	299	6	0	0	6.00
66	GCA_020784235.1	Limosilactobacillus reuteri	LTM_Sauna_2_1	SAMN22258668	2014-02	USA:California	Lion-tailed Macaque	300	0	0	1	1.00
67	GCA_020784845.1	Limosilactobacillus reuteri	MR2	SAMN22258637	-	USA	Monkey	301	0	0	1	1.00
68	GCA_020784835.1	Limosilactobacillus reuteri	MR6	SAMN22258638	-	USA	Monkey	303	0	0	1	1.00
69	GCA_012843635.1	Limosilactobacillus reuteri	WCA-386-APC-4I	SAMN14558267	2018-03-03	Germany	Sus scrofa domesticus	304	2	0	1	2.24
70	GCA_020784995.1	Limosilactobacillus reuteri	6A	SAMN22258629	2015	Canada:Calgary	Mandrill	307	0	0	1	1.00
71	GCA_020784315.1	Limosilactobacillus reuteri	O_Tuki_6_1	SAMN22258669	2013-03	USA:Nebraska	Orangutan	309	0	0	1	1.00
72	GCA_020784715.1	Limosilactobacillus reuteri	O_Tuki_7_1	SAMN22258642	2013-03	USA:Nebraska	Orangutan	311	0	0	1	1.00
73	GCA_020785025.1	Limosilactobacillus reuteri	SM_1_4_1	SAMN22258628	2013-03	USA:California	Sulawesi Macaque	311	0	0	1	1.00
74	GCA_020785305.1	Limosilactobacillus reuteri	AG_1_1_1	SAMN22258618	2013-03	USA:Nebraska	Agile Gibbon	311	0	0	1	1.00
75	GCA_020784755.1	Limosilactobacillus reuteri	O_Ruby_9_1	SAMN22258641	2013-03	USA:Nebraska	Orangutan	312	0	0	1	1.00
76	GCA_020784775.1	Limosilactobacillus reuteri	O_Ruby_8_1	SAMN22258640	2013-03	USA:Nebraska	Orangutan	312	0	0	1	1.00
77	GCA_020785175.1	Limosilactobacillus reuteri	AG_2_6_1	SAMN22258619	2013-03	USA:Nebraska	Agile Gibbon	313	0	0	1	1.00
78	GCA_020785185.1	Limosilactobacillus reuteri	AG_3_1_1	SAMN22258620	2013-03	USA:Nebraska	Agile Gibbon	314	0	0	1	1.00
79	GCA_002027295.1	Limosilactobacillus reuteri	CECT8605	SAMN06473517	-	Spain	Bos taurus	316	0	0	1	1.00
80	GCA_002128515.1	Limosilactobacillus reuteri	KLR1002	SAMN05751480	2006-06-20	South Korea	pig	320	10	0	1	10.05
81	GCA_002128765.1	Limosilactobacillus reuteri	KLR3006	SAMN05751496	2015-06-24	South Korea	pig	324	7	0	1	7.07
82	GCA_024622285.1	Limosilactobacillus reuteri	DSM 28673	SAMN29593145	2013-04-01	Germany: Freising	Mus musculus	683	0	0	1	1.00
83	GCA_024622315.1	Limosilactobacillus reuteri	DSM 100191	SAMN29593143	2007-01-01	Germany: Freiburg	Mus musculus	683	0	0	1	1.00
84	GCA_002253665.1	Limosilactobacillus reuteri	609l	SAMN06848404	2014-01-01	France	mouse	684	0	0	1	1.00
85	GCA_002253705.1	Limosilactobacillus reuteri	609d	SAMN06848401	2014-01-01	France	mouse	684	0	0	1	1.00
86	GCA_009649595.1	Limosilactobacillus reuteri	AD23	SAMN13186398	-	-	rat	684	0	0	1	1.00
87	GCA_002253825.1	Limosilactobacillus reuteri	114h	SAMN06848393	2014-01-01	France	mouse	686	0	0	1	1.00
88	GCA_009649105.1	Limosilactobacillus reuteri	100-93	SAMN13186396	-	-	mouse	686	0	0	1	1.00
89	GCA_025189785.1	Limosilactobacillus reuteri	CIRM-BIA 912	SAMN10365492	1985	Italy	-	686	0	0	1	1.00
90	GCA_025189805.1	Limosilactobacillus reuteri	CIRM-BIA 2121	SAMN10365493	1985	Italy	-	686	0	0	1	1.00
91	GCA_030262475.1	Limosilactobacillus reuteri	BIO7251	SAMN35621297	2021-01	France	-	686	0	0	1	1.00
92	GCA_002253625.1	Limosilactobacillus reuteri	609i	SAMN06848403	2014-01-01	France	mouse	687	0	0	1	1.00
93	GCA_002253725.1	Limosilactobacillus reuteri	601g	SAMN06848399	2014-01-01	France	mouse	687	0	0	1	1.00
94	GCA_002253835.1	Limosilactobacillus reuteri	114g	SAMN06848392	2014-01-01	France	mouse	687	0	0	1	1.00
95	GCA_002253865.1	Limosilactobacillus reuteri	114q	SAMN06848394	2014-01-01	France	mouse	687	0	0	1	1.00
96	GCA_002253925.1	Limosilactobacillus reuteri	107k	SAMN06848387	2014-01-01	France	mouse	687	0	0	1	1.00
97	GCA_002254035.1	Limosilactobacillus reuteri	107e	SAMN06848385	2014-01-01	France	mouse	687	0	0	1	1.00
98	GCA_004793875.1	Limosilactobacillus reuteri	NM11_1-41	SAMN10878293	2015	Canada: Toronto	Mus musculus	687	0	0	1	1.00
99	GCA_020784455.1	Limosilactobacillus reuteri	FUA 3048	SAMN22258655	2005	Canada:Edmonton	Rat	687	0	0	1	1.00
100	GCA_002253685.1	Limosilactobacillus reuteri	609e	SAMN06848402	2014-01-01	France	mouse	688	0	0	1	1.00