GCA_002142535.1 - 16 region(s)

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	lanthipeptide-class-ii	1	10,312

Region	Type	From	To	Most similar known cluster	Similarity
Region 5.1	terpene	101,384	122,190

Region	Type	From	To	Most similar known cluster	Similarity
Region 14.1	RRE-containing,lassopeptide	40,060	62,763
Region 14.2	epipeptide	75,075	96,773	thailanstatin A	NRP+Polyketide	10%

Region	Type	From	To	Most similar known cluster	Similarity
Region 15.1	lassopeptide,RRE-containing	47,788	70,274

Region	Type	From	To	Most similar known cluster	Similarity
Region 20.1	T3PKS	33,524	58,332

Region	Type	From	To	Most similar known cluster	Similarity
Region 31.1	sactipeptide	105,696	127,301	subtilosin A	RiPP:Thiopeptide	75%

Region	Type	From	To	Most similar known cluster	Similarity
Region 45.1	NRPS	1	35,528	locillomycin/locillomycin B/locillomycin C	NRP+Polyketide	28%

Region	Type	From	To	Most similar known cluster	Similarity
Region 48.1	NRP-metallophore,NRPS	1	38,104	bacillibactin	NRP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 50.1	NRPS	48,109	75,709	surfactin	NRP:Lipopeptide	34%

Region	Type	From	To	Most similar known cluster	Similarity
Region 51.1	lanthipeptide-class-ii,cyclic-lactone-autoinducer	1	21,945	amyloliquecidin GF610	RiPP	73%

Region	Type	From	To	Most similar known cluster	Similarity
Region 53.1	terpene	7,187	28,107

Region	Type	From	To	Most similar known cluster	Similarity
Region 81.1	NRPS	49,871	74,988	surfactin	NRP:Lipopeptide	39%

Region	Type	From	To	Most similar known cluster	Similarity
Region 90.1	NRPS-like,NRPS,betalactone	1	40,051	fengycin	NRP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 100.1	NRPS	1	9,197	lichenysin	NRP	14%

Region	Type	From	To	Most similar known cluster	Similarity
Region 115.1	NRPS	1	1,607	thermoactinoamide A	NRP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	lanthipeptide-class-ii	1	10,312
Region 5.1	terpene	101,384	122,190
Region 14.1	RRE-containing,lassopeptide	40,060	62,763
Region 14.2	epipeptide	75,075	96,773	thailanstatin A	NRP+Polyketide	10%
Region 15.1	lassopeptide,RRE-containing	47,788	70,274
Region 20.1	T3PKS	33,524	58,332
Region 31.1	sactipeptide	105,696	127,301	subtilosin A	RiPP:Thiopeptide	75%
Region 45.1	NRPS	1	35,528	locillomycin/locillomycin B/locillomycin C	NRP+Polyketide	28%
Region 48.1	NRP-metallophore,NRPS	1	38,104	bacillibactin	NRP	100%
Region 50.1	NRPS	48,109	75,709	surfactin	NRP:Lipopeptide	34%
Region 51.1	lanthipeptide-class-ii,cyclic-lactone-autoinducer	1	21,945	amyloliquecidin GF610	RiPP	73%
Region 53.1	terpene	7,187	28,107
Region 81.1	NRPS	49,871	74,988	surfactin	NRP:Lipopeptide	39%
Region 90.1	NRPS-like,NRPS,betalactone	1	40,051	fengycin	NRP	100%
Region 100.1	NRPS	1	9,197	lichenysin	NRP	14%
Region 115.1	NRPS	1	1,607	thermoactinoamide A	NRP	100%

gnlProkkaCKHDMJND_17 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 10,312 nt. (total: 10,312 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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gnlProkkaCKHDMJND_18 - Region 1 - terpene

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Location: 101,384 - 122,190 nt. (total: 20,807 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_27 - Region 1 - RRE-containing,lassopeptide

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Location: 40,060 - 62,763 nt. (total: 22,704 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])
lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_27 - Region 2 - epipeptide

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Location: 75,075 - 96,773 nt. (total: 21,699 nt) Show pHMM detection rules used

epipeptide: (TIGR04078 and yydH)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_28 - Region 1 - RRE-containing,lassopeptide

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Location: 47,788 - 70,274 nt. (total: 22,487 nt) Show pHMM detection rules used

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_33 - Region 1 - T3PKS

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Location: 33,524 - 58,332 nt. (total: 24,809 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_45 - Region 1 - sactipeptide

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Location: 105,696 - 127,301 nt. (total: 21,606 nt) Show pHMM detection rules used

sactipeptide: (subtilosin or thuricin or TIGR04404 or Subtilosin_A or skfc)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_73 - Region 1 - NRPS

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Location: 1 - 35,528 nt. (total: 35,528 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_76 - Region 1 - NRP-metallophore,NRPS

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Location: 1 - 38,104 nt. (total: 38,104 nt) Show pHMM detection rules used

Region on contig edge.

NRP-metallophore: (VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_78 - Region 1 - NRPS

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Location: 48,109 - 75,709 nt. (total: 27,601 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_79 - Region 1 - cyclic-lactone-autoinducer,lanthipeptide-class-ii

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Location: 1 - 21,945 nt. (total: 21,945 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_81 - Region 1 - terpene

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Location: 7,187 - 28,107 nt. (total: 20,921 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_125 - Region 1 - NRPS

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Location: 49,871 - 74,988 nt. (total: 25,118 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_134 - Region 1 - NRPS,NRPS-like,betalactone

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Location: 1 - 40,051 nt. (total: 40,051 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
NRPS: cds(Condensation and (AMP-binding or A-OX))
betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_144 - Region 1 - NRPS

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Location: 1 - 9,197 nt. (total: 9,197 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaCKHDMJND_161 - Region 1 - NRPS

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Location: 1 - 1,607 nt. (total: 1,607 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identified secondary metabolite regions using strictness 'relaxed'

Legend:

Lanthipeptide(s) for ctg4_2

MIBiG 3.1 matches for ctg4_1

antiSMASH-DB 4.0 matches for ctg4_1

antiSMASH-DB 4.0 matches for allorf_00635_00805

antiSMASH-DB 4.0 matches for allorf_09600_09719

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Sactipeptide(s) for ctg31_133

antiSMASH-DB 4.0 matches for ctg31_133

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Lanthipeptide(s) for ctg51_19

MIBiG 3.1 matches for ctg51_17

antiSMASH-DB 4.0 matches for ctg51_17

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