GCA_002161135.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOALFLPIN_13 (original name was: gnl|Prokka|OALFLPIN_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	RRE-containing	88,158	103,376

gnlProkkaOALFLPIN_67 (original name was: gnl|Prokka|OALFLPIN_67)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	arylpolyene	6,058	53,840	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 13.1	RRE-containing	88,158	103,376
Region 67.1	arylpolyene	6,058	53,840	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaOALFLPIN_1 (original name was: gnl|Prokka|OALFLPIN_1); gnlProkkaOALFLPIN_2 (original name was: gnl|Prokka|OALFLPIN_2); gnlProkkaOALFLPIN_3 (original name was: gnl|Prokka|OALFLPIN_3); gnlProkkaOALFLPIN_4 (original name was: gnl|Prokka|OALFLPIN_4); gnlProkkaOALFLPIN_5 (original name was: gnl|Prokka|OALFLPIN_5); gnlProkkaOALFLPIN_6 (original name was: gnl|Prokka|OALFLPIN_6); gnlProkkaOALFLPIN_7 (original name was: gnl|Prokka|OALFLPIN_7); gnlProkkaOALFLPIN_8 (original name was: gnl|Prokka|OALFLPIN_8); gnlProkkaOALFLPIN_9 (original name was: gnl|Prokka|OALFLPIN_9); gnlProkkaOALFLPIN_10 (original name was: gnl|Prokka|OALFLPIN_10); gnlProkkaOALFLPIN_11 (original name was: gnl|Prokka|OALFLPIN_11); gnlProkkaOALFLPIN_12 (original name was: gnl|Prokka|OALFLPIN_12); gnlProkkaOALFLPIN_14 (original name was: gnl|Prokka|OALFLPIN_14); gnlProkkaOALFLPIN_15 (original name was: gnl|Prokka|OALFLPIN_15); gnlProkkaOALFLPIN_16 (original name was: gnl|Prokka|OALFLPIN_16); gnlProkkaOALFLPIN_17 (original name was: gnl|Prokka|OALFLPIN_17); gnlProkkaOALFLPIN_18 (original name was: gnl|Prokka|OALFLPIN_18); gnlProkkaOALFLPIN_19 (original name was: gnl|Prokka|OALFLPIN_19); gnlProkkaOALFLPIN_20 (original name was: gnl|Prokka|OALFLPIN_20); gnlProkkaOALFLPIN_21 (original name was: gnl|Prokka|OALFLPIN_21); gnlProkkaOALFLPIN_22 (original name was: gnl|Prokka|OALFLPIN_22); gnlProkkaOALFLPIN_23 (original name was: gnl|Prokka|OALFLPIN_23); gnlProkkaOALFLPIN_24 (original name was: gnl|Prokka|OALFLPIN_24); gnlProkkaOALFLPIN_25 (original name was: gnl|Prokka|OALFLPIN_25); gnlProkkaOALFLPIN_26 (original name was: gnl|Prokka|OALFLPIN_26); gnlProkkaOALFLPIN_27 (original name was: gnl|Prokka|OALFLPIN_27); gnlProkkaOALFLPIN_28 (original name was: gnl|Prokka|OALFLPIN_28); gnlProkkaOALFLPIN_29 (original name was: gnl|Prokka|OALFLPIN_29); gnlProkkaOALFLPIN_30 (original name was: gnl|Prokka|OALFLPIN_30); gnlProkkaOALFLPIN_31 (original name was: gnl|Prokka|OALFLPIN_31); gnlProkkaOALFLPIN_32 (original name was: gnl|Prokka|OALFLPIN_32); gnlProkkaOALFLPIN_33 (original name was: gnl|Prokka|OALFLPIN_33); gnlProkkaOALFLPIN_34 (original name was: gnl|Prokka|OALFLPIN_34); gnlProkkaOALFLPIN_35 (original name was: gnl|Prokka|OALFLPIN_35); gnlProkkaOALFLPIN_36 (original name was: gnl|Prokka|OALFLPIN_36); gnlProkkaOALFLPIN_37 (original name was: gnl|Prokka|OALFLPIN_37); gnlProkkaOALFLPIN_38 (original name was: gnl|Prokka|OALFLPIN_38); gnlProkkaOALFLPIN_39 (original name was: gnl|Prokka|OALFLPIN_39); gnlProkkaOALFLPIN_40 (original name was: gnl|Prokka|OALFLPIN_40); gnlProkkaOALFLPIN_41 (original name was: gnl|Prokka|OALFLPIN_41); gnlProkkaOALFLPIN_42 (original name was: gnl|Prokka|OALFLPIN_42); gnlProkkaOALFLPIN_43 (original name was: gnl|Prokka|OALFLPIN_43); gnlProkkaOALFLPIN_44 (original name was: gnl|Prokka|OALFLPIN_44); gnlProkkaOALFLPIN_45 (original name was: gnl|Prokka|OALFLPIN_45); gnlProkkaOALFLPIN_46 (original name was: gnl|Prokka|OALFLPIN_46); gnlProkkaOALFLPIN_47 (original name was: gnl|Prokka|OALFLPIN_47); gnlProkkaOALFLPIN_48 (original name was: gnl|Prokka|OALFLPIN_48); gnlProkkaOALFLPIN_49 (original name was: gnl|Prokka|OALFLPIN_49); gnlProkkaOALFLPIN_50 (original name was: gnl|Prokka|OALFLPIN_50); gnlProkkaOALFLPIN_51 (original name was: gnl|Prokka|OALFLPIN_51); gnlProkkaOALFLPIN_52 (original name was: gnl|Prokka|OALFLPIN_52); gnlProkkaOALFLPIN_53 (original name was: gnl|Prokka|OALFLPIN_53); gnlProkkaOALFLPIN_54 (original name was: gnl|Prokka|OALFLPIN_54); gnlProkkaOALFLPIN_55 (original name was: gnl|Prokka|OALFLPIN_55); gnlProkkaOALFLPIN_56 (original name was: gnl|Prokka|OALFLPIN_56); gnlProkkaOALFLPIN_57 (original name was: gnl|Prokka|OALFLPIN_57); gnlProkkaOALFLPIN_58 (original name was: gnl|Prokka|OALFLPIN_58); gnlProkkaOALFLPIN_59 (original name was: gnl|Prokka|OALFLPIN_59); gnlProkkaOALFLPIN_60 (original name was: gnl|Prokka|OALFLPIN_60); gnlProkkaOALFLPIN_61 (original name was: gnl|Prokka|OALFLPIN_61); gnlProkkaOALFLPIN_62 (original name was: gnl|Prokka|OALFLPIN_62); gnlProkkaOALFLPIN_63 (original name was: gnl|Prokka|OALFLPIN_63); gnlProkkaOALFLPIN_64 (original name was: gnl|Prokka|OALFLPIN_64); gnlProkkaOALFLPIN_65 (original name was: gnl|Prokka|OALFLPIN_65); gnlProkkaOALFLPIN_66 (original name was: gnl|Prokka|OALFLPIN_66); gnlProkkaOALFLPIN_68 (original name was: gnl|Prokka|OALFLPIN_68); gnlProkkaOALFLPIN_69 (original name was: gnl|Prokka|OALFLPIN_69); gnlProkkaOALFLPIN_70 (original name was: gnl|Prokka|OALFLPIN_70); gnlProkkaOALFLPIN_71 (original name was: gnl|Prokka|OALFLPIN_71); gnlProkkaOALFLPIN_72 (original name was: gnl|Prokka|OALFLPIN_72); gnlProkkaOALFLPIN_73 (original name was: gnl|Prokka|OALFLPIN_73); gnlProkkaOALFLPIN_74 (original name was: gnl|Prokka|OALFLPIN_74); gnlProkkaOALFLPIN_75 (original name was: gnl|Prokka|OALFLPIN_75); gnlProkkaOALFLPIN_76 (original name was: gnl|Prokka|OALFLPIN_76); gnlProkkaOALFLPIN_78 (original name was: gnl|Prokka|OALFLPIN_78); gnlProkkaOALFLPIN_87 (original name was: gnl|Prokka|OALFLPIN_87)

Compact view

gnlProkkaOALFLPIN_13 - Region 1 - RRE-containing

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Location: 88,158 - 103,376 nt. (total: 15,219 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOALFLPIN_67 - Region 1 - arylpolyene

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Location: 6,058 - 53,840 nt. (total: 47,783 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg67_12

AMP-binding (50..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)