GCA_002165725.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEMLHJMKF_9 (original name was: gnl|Prokka|EMLHJMKF_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	terpene	62,262	82,942

gnlProkkaEMLHJMKF_20 (original name was: gnl|Prokka|EMLHJMKF_20)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	cyclic-lactone-autoinducer	1	20,522

gnlProkkaEMLHJMKF_39 (original name was: gnl|Prokka|EMLHJMKF_39)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	T3PKS	258,178	289,318

gnlProkkaEMLHJMKF_45 (original name was: gnl|Prokka|EMLHJMKF_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	RiPP-like	147,467	158,726	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	16%

Region	Type	From	To	Most similar known cluster	Similarity
Region 9.1	terpene	62,262	82,942
Region 20.1	cyclic-lactone-autoinducer	1	20,522
Region 39.1	T3PKS	258,178	289,318
Region 45.1	RiPP-like	147,467	158,726	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	16%

No secondary metabolite regions were found in these records:: gnlProkkaEMLHJMKF_1 (original name was: gnl|Prokka|EMLHJMKF_1); gnlProkkaEMLHJMKF_2 (original name was: gnl|Prokka|EMLHJMKF_2); gnlProkkaEMLHJMKF_3 (original name was: gnl|Prokka|EMLHJMKF_3); gnlProkkaEMLHJMKF_4 (original name was: gnl|Prokka|EMLHJMKF_4); gnlProkkaEMLHJMKF_5 (original name was: gnl|Prokka|EMLHJMKF_5); gnlProkkaEMLHJMKF_6 (original name was: gnl|Prokka|EMLHJMKF_6); gnlProkkaEMLHJMKF_7 (original name was: gnl|Prokka|EMLHJMKF_7); gnlProkkaEMLHJMKF_8 (original name was: gnl|Prokka|EMLHJMKF_8); gnlProkkaEMLHJMKF_10 (original name was: gnl|Prokka|EMLHJMKF_10); gnlProkkaEMLHJMKF_11 (original name was: gnl|Prokka|EMLHJMKF_11); gnlProkkaEMLHJMKF_12 (original name was: gnl|Prokka|EMLHJMKF_12); gnlProkkaEMLHJMKF_13 (original name was: gnl|Prokka|EMLHJMKF_13); gnlProkkaEMLHJMKF_14 (original name was: gnl|Prokka|EMLHJMKF_14); gnlProkkaEMLHJMKF_15 (original name was: gnl|Prokka|EMLHJMKF_15); gnlProkkaEMLHJMKF_16 (original name was: gnl|Prokka|EMLHJMKF_16); gnlProkkaEMLHJMKF_17 (original name was: gnl|Prokka|EMLHJMKF_17); gnlProkkaEMLHJMKF_18 (original name was: gnl|Prokka|EMLHJMKF_18); gnlProkkaEMLHJMKF_19 (original name was: gnl|Prokka|EMLHJMKF_19); gnlProkkaEMLHJMKF_21 (original name was: gnl|Prokka|EMLHJMKF_21); gnlProkkaEMLHJMKF_22 (original name was: gnl|Prokka|EMLHJMKF_22); gnlProkkaEMLHJMKF_23 (original name was: gnl|Prokka|EMLHJMKF_23); gnlProkkaEMLHJMKF_24 (original name was: gnl|Prokka|EMLHJMKF_24); gnlProkkaEMLHJMKF_25 (original name was: gnl|Prokka|EMLHJMKF_25); gnlProkkaEMLHJMKF_26 (original name was: gnl|Prokka|EMLHJMKF_26); gnlProkkaEMLHJMKF_27 (original name was: gnl|Prokka|EMLHJMKF_27); gnlProkkaEMLHJMKF_28 (original name was: gnl|Prokka|EMLHJMKF_28); gnlProkkaEMLHJMKF_29 (original name was: gnl|Prokka|EMLHJMKF_29); gnlProkkaEMLHJMKF_30 (original name was: gnl|Prokka|EMLHJMKF_30); gnlProkkaEMLHJMKF_31 (original name was: gnl|Prokka|EMLHJMKF_31); gnlProkkaEMLHJMKF_32 (original name was: gnl|Prokka|EMLHJMKF_32); gnlProkkaEMLHJMKF_33 (original name was: gnl|Prokka|EMLHJMKF_33); gnlProkkaEMLHJMKF_34 (original name was: gnl|Prokka|EMLHJMKF_34); gnlProkkaEMLHJMKF_35 (original name was: gnl|Prokka|EMLHJMKF_35); gnlProkkaEMLHJMKF_36 (original name was: gnl|Prokka|EMLHJMKF_36); gnlProkkaEMLHJMKF_37 (original name was: gnl|Prokka|EMLHJMKF_37); gnlProkkaEMLHJMKF_38 (original name was: gnl|Prokka|EMLHJMKF_38); gnlProkkaEMLHJMKF_40 (original name was: gnl|Prokka|EMLHJMKF_40); gnlProkkaEMLHJMKF_41 (original name was: gnl|Prokka|EMLHJMKF_41); gnlProkkaEMLHJMKF_42 (original name was: gnl|Prokka|EMLHJMKF_42); gnlProkkaEMLHJMKF_43 (original name was: gnl|Prokka|EMLHJMKF_43); gnlProkkaEMLHJMKF_44 (original name was: gnl|Prokka|EMLHJMKF_44); gnlProkkaEMLHJMKF_46 (original name was: gnl|Prokka|EMLHJMKF_46); gnlProkkaEMLHJMKF_47 (original name was: gnl|Prokka|EMLHJMKF_47); gnlProkkaEMLHJMKF_48 (original name was: gnl|Prokka|EMLHJMKF_48); gnlProkkaEMLHJMKF_49 (original name was: gnl|Prokka|EMLHJMKF_49); gnlProkkaEMLHJMKF_50 (original name was: gnl|Prokka|EMLHJMKF_50); gnlProkkaEMLHJMKF_51 (original name was: gnl|Prokka|EMLHJMKF_51); gnlProkkaEMLHJMKF_52 (original name was: gnl|Prokka|EMLHJMKF_52); gnlProkkaEMLHJMKF_53 (original name was: gnl|Prokka|EMLHJMKF_53); gnlProkkaEMLHJMKF_54 (original name was: gnl|Prokka|EMLHJMKF_54); gnlProkkaEMLHJMKF_55 (original name was: gnl|Prokka|EMLHJMKF_55); gnlProkkaEMLHJMKF_56 (original name was: gnl|Prokka|EMLHJMKF_56); gnlProkkaEMLHJMKF_57 (original name was: gnl|Prokka|EMLHJMKF_57); gnlProkkaEMLHJMKF_58 (original name was: gnl|Prokka|EMLHJMKF_58)

Compact view

gnlProkkaEMLHJMKF_9 - Region 1 - terpene

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Location: 62,262 - 82,942 nt. (total: 20,681 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEMLHJMKF_20 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 20,522 nt. (total: 20,522 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEMLHJMKF_39 - Region 1 - T3PKS

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Location: 258,178 - 289,318 nt. (total: 31,141 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEMLHJMKF_45 - Region 1 - RiPP-like

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Location: 147,467 - 158,726 nt. (total: 11,260 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1