GCA_002249825.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCHFHMHFB_4 (original name was: gnl|Prokka|CHFHMHFB_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	82,941	108,840

gnlProkkaCHFHMHFB_13 (original name was: gnl|Prokka|CHFHMHFB_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	cyclic-lactone-autoinducer	23,863	44,568

gnlProkkaCHFHMHFB_46 (original name was: gnl|Prokka|CHFHMHFB_46)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	RiPP-like	4,668	16,818

gnlProkkaCHFHMHFB_65 (original name was: gnl|Prokka|CHFHMHFB_65)

Region	Type	From	To	Most similar known cluster		Similarity
Region 54.1	terpene	71,687	92,568

Region	Type	From	To	Similarity
Region 4.1	T3PKS	82,941	108,840
Region 13.1	cyclic-lactone-autoinducer	23,863	44,568
Region 46.1	RiPP-like	4,668	16,818
Region 54.1	terpene	71,687	92,568

No secondary metabolite regions were found in these records:: gnlProkkaCHFHMHFB_1 (original name was: gnl|Prokka|CHFHMHFB_1); gnlProkkaCHFHMHFB_2 (original name was: gnl|Prokka|CHFHMHFB_2); gnlProkkaCHFHMHFB_3 (original name was: gnl|Prokka|CHFHMHFB_3); gnlProkkaCHFHMHFB_5 (original name was: gnl|Prokka|CHFHMHFB_5); gnlProkkaCHFHMHFB_6 (original name was: gnl|Prokka|CHFHMHFB_6); gnlProkkaCHFHMHFB_7 (original name was: gnl|Prokka|CHFHMHFB_7); gnlProkkaCHFHMHFB_8 (original name was: gnl|Prokka|CHFHMHFB_8); gnlProkkaCHFHMHFB_9 (original name was: gnl|Prokka|CHFHMHFB_9); gnlProkkaCHFHMHFB_10 (original name was: gnl|Prokka|CHFHMHFB_10); gnlProkkaCHFHMHFB_11 (original name was: gnl|Prokka|CHFHMHFB_11); gnlProkkaCHFHMHFB_12 (original name was: gnl|Prokka|CHFHMHFB_12); gnlProkkaCHFHMHFB_14 (original name was: gnl|Prokka|CHFHMHFB_14); gnlProkkaCHFHMHFB_15 (original name was: gnl|Prokka|CHFHMHFB_15); gnlProkkaCHFHMHFB_16 (original name was: gnl|Prokka|CHFHMHFB_16); gnlProkkaCHFHMHFB_17 (original name was: gnl|Prokka|CHFHMHFB_17); gnlProkkaCHFHMHFB_18 (original name was: gnl|Prokka|CHFHMHFB_18); gnlProkkaCHFHMHFB_19 (original name was: gnl|Prokka|CHFHMHFB_19); gnlProkkaCHFHMHFB_20 (original name was: gnl|Prokka|CHFHMHFB_20); gnlProkkaCHFHMHFB_21 (original name was: gnl|Prokka|CHFHMHFB_21); gnlProkkaCHFHMHFB_22 (original name was: gnl|Prokka|CHFHMHFB_22); gnlProkkaCHFHMHFB_23 (original name was: gnl|Prokka|CHFHMHFB_23); gnlProkkaCHFHMHFB_24 (original name was: gnl|Prokka|CHFHMHFB_24); gnlProkkaCHFHMHFB_25 (original name was: gnl|Prokka|CHFHMHFB_25); gnlProkkaCHFHMHFB_26 (original name was: gnl|Prokka|CHFHMHFB_26); gnlProkkaCHFHMHFB_27 (original name was: gnl|Prokka|CHFHMHFB_27); gnlProkkaCHFHMHFB_28 (original name was: gnl|Prokka|CHFHMHFB_28); gnlProkkaCHFHMHFB_29 (original name was: gnl|Prokka|CHFHMHFB_29); gnlProkkaCHFHMHFB_30 (original name was: gnl|Prokka|CHFHMHFB_30); gnlProkkaCHFHMHFB_31 (original name was: gnl|Prokka|CHFHMHFB_31); gnlProkkaCHFHMHFB_32 (original name was: gnl|Prokka|CHFHMHFB_32); gnlProkkaCHFHMHFB_33 (original name was: gnl|Prokka|CHFHMHFB_33); gnlProkkaCHFHMHFB_34 (original name was: gnl|Prokka|CHFHMHFB_34); gnlProkkaCHFHMHFB_35 (original name was: gnl|Prokka|CHFHMHFB_35); gnlProkkaCHFHMHFB_36 (original name was: gnl|Prokka|CHFHMHFB_36); gnlProkkaCHFHMHFB_37 (original name was: gnl|Prokka|CHFHMHFB_37); gnlProkkaCHFHMHFB_38 (original name was: gnl|Prokka|CHFHMHFB_38); gnlProkkaCHFHMHFB_39 (original name was: gnl|Prokka|CHFHMHFB_39); gnlProkkaCHFHMHFB_40 (original name was: gnl|Prokka|CHFHMHFB_40); gnlProkkaCHFHMHFB_41 (original name was: gnl|Prokka|CHFHMHFB_41); gnlProkkaCHFHMHFB_42 (original name was: gnl|Prokka|CHFHMHFB_42); gnlProkkaCHFHMHFB_43 (original name was: gnl|Prokka|CHFHMHFB_43); gnlProkkaCHFHMHFB_44 (original name was: gnl|Prokka|CHFHMHFB_44); gnlProkkaCHFHMHFB_45 (original name was: gnl|Prokka|CHFHMHFB_45); gnlProkkaCHFHMHFB_47 (original name was: gnl|Prokka|CHFHMHFB_47); gnlProkkaCHFHMHFB_48 (original name was: gnl|Prokka|CHFHMHFB_48); gnlProkkaCHFHMHFB_49 (original name was: gnl|Prokka|CHFHMHFB_49); gnlProkkaCHFHMHFB_50 (original name was: gnl|Prokka|CHFHMHFB_50); gnlProkkaCHFHMHFB_51 (original name was: gnl|Prokka|CHFHMHFB_51); gnlProkkaCHFHMHFB_57 (original name was: gnl|Prokka|CHFHMHFB_57); gnlProkkaCHFHMHFB_64 (original name was: gnl|Prokka|CHFHMHFB_64); gnlProkkaCHFHMHFB_66 (original name was: gnl|Prokka|CHFHMHFB_66)

Compact view

gnlProkkaCHFHMHFB_4 - Region 1 - T3PKS

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Location: 82,941 - 108,840 nt. (total: 25,900 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCHFHMHFB_13 - Region 1 - cyclic-lactone-autoinducer

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Location: 23,863 - 44,568 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCHFHMHFB_46 - Region 1 - RiPP-like

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Location: 4,668 - 16,818 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCHFHMHFB_65 - Region 1 - terpene

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Location: 71,687 - 92,568 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.