GCA_002253185.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBJAMIPPH_15 (original name was: gnl|Prokka|BJAMIPPH_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	RiPP-like	188,947	200,146

gnlProkkaBJAMIPPH_23 (original name was: gnl|Prokka|BJAMIPPH_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	RiPP-like	1	9,154	gassericin T	RiPP	77%

gnlProkkaBJAMIPPH_67 (original name was: gnl|Prokka|BJAMIPPH_67)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	RiPP-like	31,808	39,614	gassericin T	RiPP	33%

Region	Type	From	To	Most similar known cluster	Similarity
Region 15.1	RiPP-like	188,947	200,146
Region 17.1	RiPP-like	1	9,154	gassericin T	RiPP	77%
Region 25.1	RiPP-like	31,808	39,614	gassericin T	RiPP	33%

No secondary metabolite regions were found in these records:: gnlProkkaBJAMIPPH_1 (original name was: gnl|Prokka|BJAMIPPH_1); gnlProkkaBJAMIPPH_2 (original name was: gnl|Prokka|BJAMIPPH_2); gnlProkkaBJAMIPPH_3 (original name was: gnl|Prokka|BJAMIPPH_3); gnlProkkaBJAMIPPH_4 (original name was: gnl|Prokka|BJAMIPPH_4); gnlProkkaBJAMIPPH_5 (original name was: gnl|Prokka|BJAMIPPH_5); gnlProkkaBJAMIPPH_6 (original name was: gnl|Prokka|BJAMIPPH_6); gnlProkkaBJAMIPPH_7 (original name was: gnl|Prokka|BJAMIPPH_7); gnlProkkaBJAMIPPH_8 (original name was: gnl|Prokka|BJAMIPPH_8); gnlProkkaBJAMIPPH_9 (original name was: gnl|Prokka|BJAMIPPH_9); gnlProkkaBJAMIPPH_10 (original name was: gnl|Prokka|BJAMIPPH_10); gnlProkkaBJAMIPPH_11 (original name was: gnl|Prokka|BJAMIPPH_11); gnlProkkaBJAMIPPH_12 (original name was: gnl|Prokka|BJAMIPPH_12); gnlProkkaBJAMIPPH_13 (original name was: gnl|Prokka|BJAMIPPH_13); gnlProkkaBJAMIPPH_14 (original name was: gnl|Prokka|BJAMIPPH_14); gnlProkkaBJAMIPPH_16 (original name was: gnl|Prokka|BJAMIPPH_16); gnlProkkaBJAMIPPH_27 (original name was: gnl|Prokka|BJAMIPPH_27); gnlProkkaBJAMIPPH_34 (original name was: gnl|Prokka|BJAMIPPH_34); gnlProkkaBJAMIPPH_38 (original name was: gnl|Prokka|BJAMIPPH_38); gnlProkkaBJAMIPPH_45 (original name was: gnl|Prokka|BJAMIPPH_45); gnlProkkaBJAMIPPH_50 (original name was: gnl|Prokka|BJAMIPPH_50); gnlProkkaBJAMIPPH_56 (original name was: gnl|Prokka|BJAMIPPH_56); gnlProkkaBJAMIPPH_62 (original name was: gnl|Prokka|BJAMIPPH_62); gnlProkkaBJAMIPPH_71 (original name was: gnl|Prokka|BJAMIPPH_71); gnlProkkaBJAMIPPH_72 (original name was: gnl|Prokka|BJAMIPPH_72); gnlProkkaBJAMIPPH_73 (original name was: gnl|Prokka|BJAMIPPH_73); gnlProkkaBJAMIPPH_74 (original name was: gnl|Prokka|BJAMIPPH_74); gnlProkkaBJAMIPPH_75 (original name was: gnl|Prokka|BJAMIPPH_75)

Compact view

gnlProkkaBJAMIPPH_15 - Region 1 - RiPP-like

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Location: 188,947 - 200,146 nt. (total: 11,200 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBJAMIPPH_23 - Region 1 - RiPP-like

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Location: 1 - 9,154 nt. (total: 9,154 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaBJAMIPPH_67 - Region 1 - RiPP-like

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Location: 31,808 - 39,614 nt. (total: 7,807 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1