GCA_002253625.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDDOJNNJC_33 (original name was: gnl|Prokka|DDOJNNJC_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	129,023	141,173

gnlProkkaDDOJNNJC_43 (original name was: gnl|Prokka|DDOJNNJC_43)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RiPP-like	1	6,697

gnlProkkaDDOJNNJC_45 (original name was: gnl|Prokka|DDOJNNJC_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	T3PKS	21,242	62,399

gnlProkkaDDOJNNJC_59 (original name was: gnl|Prokka|DDOJNNJC_59)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	RiPP-like	1	4,387	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	16%

Region	Type	From	To	Most similar known cluster	Similarity
Region 22.1	RiPP-like	129,023	141,173
Region 31.1	RiPP-like	1	6,697
Region 33.1	T3PKS	21,242	62,399
Region 46.1	RiPP-like	1	4,387	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	16%

No secondary metabolite regions were found in these records:: gnlProkkaDDOJNNJC_10 (original name was: gnl|Prokka|DDOJNNJC_10); gnlProkkaDDOJNNJC_11 (original name was: gnl|Prokka|DDOJNNJC_11); gnlProkkaDDOJNNJC_12 (original name was: gnl|Prokka|DDOJNNJC_12); gnlProkkaDDOJNNJC_13 (original name was: gnl|Prokka|DDOJNNJC_13); gnlProkkaDDOJNNJC_14 (original name was: gnl|Prokka|DDOJNNJC_14); gnlProkkaDDOJNNJC_15 (original name was: gnl|Prokka|DDOJNNJC_15); gnlProkkaDDOJNNJC_16 (original name was: gnl|Prokka|DDOJNNJC_16); gnlProkkaDDOJNNJC_17 (original name was: gnl|Prokka|DDOJNNJC_17); gnlProkkaDDOJNNJC_18 (original name was: gnl|Prokka|DDOJNNJC_18); gnlProkkaDDOJNNJC_19 (original name was: gnl|Prokka|DDOJNNJC_19); gnlProkkaDDOJNNJC_21 (original name was: gnl|Prokka|DDOJNNJC_21); gnlProkkaDDOJNNJC_22 (original name was: gnl|Prokka|DDOJNNJC_22); gnlProkkaDDOJNNJC_23 (original name was: gnl|Prokka|DDOJNNJC_23); gnlProkkaDDOJNNJC_24 (original name was: gnl|Prokka|DDOJNNJC_24); gnlProkkaDDOJNNJC_25 (original name was: gnl|Prokka|DDOJNNJC_25); gnlProkkaDDOJNNJC_26 (original name was: gnl|Prokka|DDOJNNJC_26); gnlProkkaDDOJNNJC_27 (original name was: gnl|Prokka|DDOJNNJC_27); gnlProkkaDDOJNNJC_28 (original name was: gnl|Prokka|DDOJNNJC_28); gnlProkkaDDOJNNJC_29 (original name was: gnl|Prokka|DDOJNNJC_29); gnlProkkaDDOJNNJC_30 (original name was: gnl|Prokka|DDOJNNJC_30); gnlProkkaDDOJNNJC_32 (original name was: gnl|Prokka|DDOJNNJC_32); gnlProkkaDDOJNNJC_34 (original name was: gnl|Prokka|DDOJNNJC_34); gnlProkkaDDOJNNJC_35 (original name was: gnl|Prokka|DDOJNNJC_35); gnlProkkaDDOJNNJC_36 (original name was: gnl|Prokka|DDOJNNJC_36); gnlProkkaDDOJNNJC_37 (original name was: gnl|Prokka|DDOJNNJC_37); gnlProkkaDDOJNNJC_38 (original name was: gnl|Prokka|DDOJNNJC_38); gnlProkkaDDOJNNJC_39 (original name was: gnl|Prokka|DDOJNNJC_39); gnlProkkaDDOJNNJC_40 (original name was: gnl|Prokka|DDOJNNJC_40); gnlProkkaDDOJNNJC_41 (original name was: gnl|Prokka|DDOJNNJC_41); gnlProkkaDDOJNNJC_44 (original name was: gnl|Prokka|DDOJNNJC_44); gnlProkkaDDOJNNJC_46 (original name was: gnl|Prokka|DDOJNNJC_46); gnlProkkaDDOJNNJC_47 (original name was: gnl|Prokka|DDOJNNJC_47); gnlProkkaDDOJNNJC_48 (original name was: gnl|Prokka|DDOJNNJC_48); gnlProkkaDDOJNNJC_49 (original name was: gnl|Prokka|DDOJNNJC_49); gnlProkkaDDOJNNJC_50 (original name was: gnl|Prokka|DDOJNNJC_50); gnlProkkaDDOJNNJC_51 (original name was: gnl|Prokka|DDOJNNJC_51); gnlProkkaDDOJNNJC_52 (original name was: gnl|Prokka|DDOJNNJC_52); gnlProkkaDDOJNNJC_54 (original name was: gnl|Prokka|DDOJNNJC_54); gnlProkkaDDOJNNJC_55 (original name was: gnl|Prokka|DDOJNNJC_55); gnlProkkaDDOJNNJC_56 (original name was: gnl|Prokka|DDOJNNJC_56); gnlProkkaDDOJNNJC_57 (original name was: gnl|Prokka|DDOJNNJC_57); gnlProkkaDDOJNNJC_58 (original name was: gnl|Prokka|DDOJNNJC_58); gnlProkkaDDOJNNJC_60 (original name was: gnl|Prokka|DDOJNNJC_60); gnlProkkaDDOJNNJC_61 (original name was: gnl|Prokka|DDOJNNJC_61); gnlProkkaDDOJNNJC_62 (original name was: gnl|Prokka|DDOJNNJC_62); gnlProkkaDDOJNNJC_63 (original name was: gnl|Prokka|DDOJNNJC_63); gnlProkkaDDOJNNJC_65 (original name was: gnl|Prokka|DDOJNNJC_65); gnlProkkaDDOJNNJC_66 (original name was: gnl|Prokka|DDOJNNJC_66); gnlProkkaDDOJNNJC_67 (original name was: gnl|Prokka|DDOJNNJC_67); gnlProkkaDDOJNNJC_68 (original name was: gnl|Prokka|DDOJNNJC_68); gnlProkkaDDOJNNJC_69 (original name was: gnl|Prokka|DDOJNNJC_69); gnlProkkaDDOJNNJC_70 (original name was: gnl|Prokka|DDOJNNJC_70); gnlProkkaDDOJNNJC_71 (original name was: gnl|Prokka|DDOJNNJC_71); gnlProkkaDDOJNNJC_72 (original name was: gnl|Prokka|DDOJNNJC_72); gnlProkkaDDOJNNJC_73 (original name was: gnl|Prokka|DDOJNNJC_73); gnlProkkaDDOJNNJC_74 (original name was: gnl|Prokka|DDOJNNJC_74); gnlProkkaDDOJNNJC_76 (original name was: gnl|Prokka|DDOJNNJC_76); gnlProkkaDDOJNNJC_77 (original name was: gnl|Prokka|DDOJNNJC_77); gnlProkkaDDOJNNJC_78 (original name was: gnl|Prokka|DDOJNNJC_78); gnlProkkaDDOJNNJC_79 (original name was: gnl|Prokka|DDOJNNJC_79); gnlProkkaDDOJNNJC_80 (original name was: gnl|Prokka|DDOJNNJC_80); gnlProkkaDDOJNNJC_81 (original name was: gnl|Prokka|DDOJNNJC_81); gnlProkkaDDOJNNJC_93 (original name was: gnl|Prokka|DDOJNNJC_93); gnlProkkaDDOJNNJC_97 (original name was: gnl|Prokka|DDOJNNJC_97); gnlProkkaDDOJNNJC_105 (original name was: gnl|Prokka|DDOJNNJC_105)

Compact view

gnlProkkaDDOJNNJC_33 - Region 1 - RiPP-like

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Location: 129,023 - 141,173 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDDOJNNJC_43 - Region 1 - RiPP-like

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Location: 1 - 6,697 nt. (total: 6,697 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDDOJNNJC_45 - Region 1 - T3PKS

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Location: 21,242 - 62,399 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDDOJNNJC_59 - Region 1 - RiPP-like

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Location: 1 - 4,387 nt. (total: 4,387 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1