GCA_002253725.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDFJMGIHN_10 (original name was: gnl|Prokka|DFJMGIHN_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	RiPP-like	1	4,953	gassericin T	RiPP	22%

gnlProkkaDFJMGIHN_19 (original name was: gnl|Prokka|DFJMGIHN_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	T3PKS	46,791	75,575

gnlProkkaDFJMGIHN_43 (original name was: gnl|Prokka|DFJMGIHN_43)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	RiPP-like	65,574	73,630

No secondary metabolite regions were found in these records:: gnlProkkaDFJMGIHN_3 (original name was: gnl|Prokka|DFJMGIHN_3); gnlProkkaDFJMGIHN_4 (original name was: gnl|Prokka|DFJMGIHN_4); gnlProkkaDFJMGIHN_5 (original name was: gnl|Prokka|DFJMGIHN_5); gnlProkkaDFJMGIHN_6 (original name was: gnl|Prokka|DFJMGIHN_6); gnlProkkaDFJMGIHN_7 (original name was: gnl|Prokka|DFJMGIHN_7); gnlProkkaDFJMGIHN_8 (original name was: gnl|Prokka|DFJMGIHN_8); gnlProkkaDFJMGIHN_9 (original name was: gnl|Prokka|DFJMGIHN_9); gnlProkkaDFJMGIHN_11 (original name was: gnl|Prokka|DFJMGIHN_11); gnlProkkaDFJMGIHN_12 (original name was: gnl|Prokka|DFJMGIHN_12); gnlProkkaDFJMGIHN_13 (original name was: gnl|Prokka|DFJMGIHN_13); gnlProkkaDFJMGIHN_14 (original name was: gnl|Prokka|DFJMGIHN_14); gnlProkkaDFJMGIHN_15 (original name was: gnl|Prokka|DFJMGIHN_15); gnlProkkaDFJMGIHN_16 (original name was: gnl|Prokka|DFJMGIHN_16); gnlProkkaDFJMGIHN_17 (original name was: gnl|Prokka|DFJMGIHN_17); gnlProkkaDFJMGIHN_18 (original name was: gnl|Prokka|DFJMGIHN_18); gnlProkkaDFJMGIHN_20 (original name was: gnl|Prokka|DFJMGIHN_20); gnlProkkaDFJMGIHN_21 (original name was: gnl|Prokka|DFJMGIHN_21); gnlProkkaDFJMGIHN_22 (original name was: gnl|Prokka|DFJMGIHN_22); gnlProkkaDFJMGIHN_23 (original name was: gnl|Prokka|DFJMGIHN_23); gnlProkkaDFJMGIHN_25 (original name was: gnl|Prokka|DFJMGIHN_25); gnlProkkaDFJMGIHN_26 (original name was: gnl|Prokka|DFJMGIHN_26); gnlProkkaDFJMGIHN_27 (original name was: gnl|Prokka|DFJMGIHN_27); gnlProkkaDFJMGIHN_28 (original name was: gnl|Prokka|DFJMGIHN_28); gnlProkkaDFJMGIHN_29 (original name was: gnl|Prokka|DFJMGIHN_29); gnlProkkaDFJMGIHN_30 (original name was: gnl|Prokka|DFJMGIHN_30); gnlProkkaDFJMGIHN_31 (original name was: gnl|Prokka|DFJMGIHN_31); gnlProkkaDFJMGIHN_32 (original name was: gnl|Prokka|DFJMGIHN_32); gnlProkkaDFJMGIHN_33 (original name was: gnl|Prokka|DFJMGIHN_33); gnlProkkaDFJMGIHN_34 (original name was: gnl|Prokka|DFJMGIHN_34); gnlProkkaDFJMGIHN_36 (original name was: gnl|Prokka|DFJMGIHN_36); gnlProkkaDFJMGIHN_37 (original name was: gnl|Prokka|DFJMGIHN_37); gnlProkkaDFJMGIHN_38 (original name was: gnl|Prokka|DFJMGIHN_38); gnlProkkaDFJMGIHN_39 (original name was: gnl|Prokka|DFJMGIHN_39); gnlProkkaDFJMGIHN_40 (original name was: gnl|Prokka|DFJMGIHN_40); gnlProkkaDFJMGIHN_41 (original name was: gnl|Prokka|DFJMGIHN_41); gnlProkkaDFJMGIHN_42 (original name was: gnl|Prokka|DFJMGIHN_42); gnlProkkaDFJMGIHN_44 (original name was: gnl|Prokka|DFJMGIHN_44); gnlProkkaDFJMGIHN_45 (original name was: gnl|Prokka|DFJMGIHN_45); gnlProkkaDFJMGIHN_47 (original name was: gnl|Prokka|DFJMGIHN_47); gnlProkkaDFJMGIHN_48 (original name was: gnl|Prokka|DFJMGIHN_48); gnlProkkaDFJMGIHN_49 (original name was: gnl|Prokka|DFJMGIHN_49); gnlProkkaDFJMGIHN_55 (original name was: gnl|Prokka|DFJMGIHN_55); gnlProkkaDFJMGIHN_64 (original name was: gnl|Prokka|DFJMGIHN_64); gnlProkkaDFJMGIHN_76 (original name was: gnl|Prokka|DFJMGIHN_76); gnlProkkaDFJMGIHN_87 (original name was: gnl|Prokka|DFJMGIHN_87); gnlProkkaDFJMGIHN_98 (original name was: gnl|Prokka|DFJMGIHN_98); gnlProkkaDFJMGIHN_99 (original name was: gnl|Prokka|DFJMGIHN_99); gnlProkkaDFJMGIHN_100 (original name was: gnl|Prokka|DFJMGIHN_100); gnlProkkaDFJMGIHN_101 (original name was: gnl|Prokka|DFJMGIHN_101); gnlProkkaDFJMGIHN_102 (original name was: gnl|Prokka|DFJMGIHN_102); gnlProkkaDFJMGIHN_103 (original name was: gnl|Prokka|DFJMGIHN_103); gnlProkkaDFJMGIHN_105 (original name was: gnl|Prokka|DFJMGIHN_105); gnlProkkaDFJMGIHN_106 (original name was: gnl|Prokka|DFJMGIHN_106); gnlProkkaDFJMGIHN_107 (original name was: gnl|Prokka|DFJMGIHN_107); gnlProkkaDFJMGIHN_108 (original name was: gnl|Prokka|DFJMGIHN_108); gnlProkkaDFJMGIHN_109 (original name was: gnl|Prokka|DFJMGIHN_109); gnlProkkaDFJMGIHN_110 (original name was: gnl|Prokka|DFJMGIHN_110); gnlProkkaDFJMGIHN_111 (original name was: gnl|Prokka|DFJMGIHN_111); gnlProkkaDFJMGIHN_112 (original name was: gnl|Prokka|DFJMGIHN_112); gnlProkkaDFJMGIHN_113 (original name was: gnl|Prokka|DFJMGIHN_113); gnlProkkaDFJMGIHN_114 (original name was: gnl|Prokka|DFJMGIHN_114); gnlProkkaDFJMGIHN_116 (original name was: gnl|Prokka|DFJMGIHN_116); gnlProkkaDFJMGIHN_117 (original name was: gnl|Prokka|DFJMGIHN_117); gnlProkkaDFJMGIHN_118 (original name was: gnl|Prokka|DFJMGIHN_118); gnlProkkaDFJMGIHN_119 (original name was: gnl|Prokka|DFJMGIHN_119); gnlProkkaDFJMGIHN_120 (original name was: gnl|Prokka|DFJMGIHN_120); gnlProkkaDFJMGIHN_121 (original name was: gnl|Prokka|DFJMGIHN_121); gnlProkkaDFJMGIHN_122 (original name was: gnl|Prokka|DFJMGIHN_122); gnlProkkaDFJMGIHN_123 (original name was: gnl|Prokka|DFJMGIHN_123); gnlProkkaDFJMGIHN_124 (original name was: gnl|Prokka|DFJMGIHN_124); gnlProkkaDFJMGIHN_125 (original name was: gnl|Prokka|DFJMGIHN_125); gnlProkkaDFJMGIHN_127 (original name was: gnl|Prokka|DFJMGIHN_127); gnlProkkaDFJMGIHN_128 (original name was: gnl|Prokka|DFJMGIHN_128); gnlProkkaDFJMGIHN_129 (original name was: gnl|Prokka|DFJMGIHN_129); gnlProkkaDFJMGIHN_130 (original name was: gnl|Prokka|DFJMGIHN_130); gnlProkkaDFJMGIHN_131 (original name was: gnl|Prokka|DFJMGIHN_131); gnlProkkaDFJMGIHN_132 (original name was: gnl|Prokka|DFJMGIHN_132); gnlProkkaDFJMGIHN_133 (original name was: gnl|Prokka|DFJMGIHN_133); gnlProkkaDFJMGIHN_134 (original name was: gnl|Prokka|DFJMGIHN_134); gnlProkkaDFJMGIHN_135 (original name was: gnl|Prokka|DFJMGIHN_135); gnlProkkaDFJMGIHN_136 (original name was: gnl|Prokka|DFJMGIHN_136); gnlProkkaDFJMGIHN_138 (original name was: gnl|Prokka|DFJMGIHN_138); gnlProkkaDFJMGIHN_139 (original name was: gnl|Prokka|DFJMGIHN_139); gnlProkkaDFJMGIHN_140 (original name was: gnl|Prokka|DFJMGIHN_140); gnlProkkaDFJMGIHN_141 (original name was: gnl|Prokka|DFJMGIHN_141); gnlProkkaDFJMGIHN_142 (original name was: gnl|Prokka|DFJMGIHN_142); gnlProkkaDFJMGIHN_143 (original name was: gnl|Prokka|DFJMGIHN_143); gnlProkkaDFJMGIHN_144 (original name was: gnl|Prokka|DFJMGIHN_144); gnlProkkaDFJMGIHN_145 (original name was: gnl|Prokka|DFJMGIHN_145); gnlProkkaDFJMGIHN_146 (original name was: gnl|Prokka|DFJMGIHN_146); gnlProkkaDFJMGIHN_147 (original name was: gnl|Prokka|DFJMGIHN_147)

Compact view

gnlProkkaDFJMGIHN_10 - Region 1 - RiPP-like

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Location: 1 - 4,953 nt. (total: 4,953 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaDFJMGIHN_19 - Region 1 - T3PKS

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Location: 46,791 - 75,575 nt. (total: 28,785 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDFJMGIHN_43 - Region 1 - RiPP-like

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Location: 65,574 - 73,630 nt. (total: 8,057 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.