GCA_002253925.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGGJFMMIN_14 (original name was: gnl|Prokka|GGJFMMIN_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	2,173	8,388

gnlProkkaGGJFMMIN_23 (original name was: gnl|Prokka|GGJFMMIN_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	lassopeptide	1	5,112

gnlProkkaGGJFMMIN_30 (original name was: gnl|Prokka|GGJFMMIN_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	T3PKS	10,381	51,538

gnlProkkaGGJFMMIN_41 (original name was: gnl|Prokka|GGJFMMIN_41)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	RiPP-like	1	1,818

gnlProkkaGGJFMMIN_42 (original name was: gnl|Prokka|GGJFMMIN_42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	RiPP-like	64,395	74,443

Region	Type	From	To	Similarity
Region 12.1	RiPP-like	2,173	8,388
Region 21.1	lassopeptide	1	5,112
Region 27.1	T3PKS	10,381	51,538
Region 37.1	RiPP-like	1	1,818
Region 38.1	RiPP-like	64,395	74,443

No secondary metabolite regions were found in these records:: gnlProkkaGGJFMMIN_3 (original name was: gnl|Prokka|GGJFMMIN_3); gnlProkkaGGJFMMIN_4 (original name was: gnl|Prokka|GGJFMMIN_4); gnlProkkaGGJFMMIN_5 (original name was: gnl|Prokka|GGJFMMIN_5); gnlProkkaGGJFMMIN_6 (original name was: gnl|Prokka|GGJFMMIN_6); gnlProkkaGGJFMMIN_7 (original name was: gnl|Prokka|GGJFMMIN_7); gnlProkkaGGJFMMIN_8 (original name was: gnl|Prokka|GGJFMMIN_8); gnlProkkaGGJFMMIN_9 (original name was: gnl|Prokka|GGJFMMIN_9); gnlProkkaGGJFMMIN_10 (original name was: gnl|Prokka|GGJFMMIN_10); gnlProkkaGGJFMMIN_11 (original name was: gnl|Prokka|GGJFMMIN_11); gnlProkkaGGJFMMIN_12 (original name was: gnl|Prokka|GGJFMMIN_12); gnlProkkaGGJFMMIN_13 (original name was: gnl|Prokka|GGJFMMIN_13); gnlProkkaGGJFMMIN_15 (original name was: gnl|Prokka|GGJFMMIN_15); gnlProkkaGGJFMMIN_16 (original name was: gnl|Prokka|GGJFMMIN_16); gnlProkkaGGJFMMIN_17 (original name was: gnl|Prokka|GGJFMMIN_17); gnlProkkaGGJFMMIN_18 (original name was: gnl|Prokka|GGJFMMIN_18); gnlProkkaGGJFMMIN_19 (original name was: gnl|Prokka|GGJFMMIN_19); gnlProkkaGGJFMMIN_20 (original name was: gnl|Prokka|GGJFMMIN_20); gnlProkkaGGJFMMIN_21 (original name was: gnl|Prokka|GGJFMMIN_21); gnlProkkaGGJFMMIN_22 (original name was: gnl|Prokka|GGJFMMIN_22); gnlProkkaGGJFMMIN_25 (original name was: gnl|Prokka|GGJFMMIN_25); gnlProkkaGGJFMMIN_26 (original name was: gnl|Prokka|GGJFMMIN_26); gnlProkkaGGJFMMIN_27 (original name was: gnl|Prokka|GGJFMMIN_27); gnlProkkaGGJFMMIN_28 (original name was: gnl|Prokka|GGJFMMIN_28); gnlProkkaGGJFMMIN_29 (original name was: gnl|Prokka|GGJFMMIN_29); gnlProkkaGGJFMMIN_31 (original name was: gnl|Prokka|GGJFMMIN_31); gnlProkkaGGJFMMIN_32 (original name was: gnl|Prokka|GGJFMMIN_32); gnlProkkaGGJFMMIN_33 (original name was: gnl|Prokka|GGJFMMIN_33); gnlProkkaGGJFMMIN_34 (original name was: gnl|Prokka|GGJFMMIN_34); gnlProkkaGGJFMMIN_36 (original name was: gnl|Prokka|GGJFMMIN_36); gnlProkkaGGJFMMIN_37 (original name was: gnl|Prokka|GGJFMMIN_37); gnlProkkaGGJFMMIN_38 (original name was: gnl|Prokka|GGJFMMIN_38); gnlProkkaGGJFMMIN_39 (original name was: gnl|Prokka|GGJFMMIN_39); gnlProkkaGGJFMMIN_40 (original name was: gnl|Prokka|GGJFMMIN_40); gnlProkkaGGJFMMIN_43 (original name was: gnl|Prokka|GGJFMMIN_43); gnlProkkaGGJFMMIN_44 (original name was: gnl|Prokka|GGJFMMIN_44); gnlProkkaGGJFMMIN_45 (original name was: gnl|Prokka|GGJFMMIN_45); gnlProkkaGGJFMMIN_47 (original name was: gnl|Prokka|GGJFMMIN_47); gnlProkkaGGJFMMIN_48 (original name was: gnl|Prokka|GGJFMMIN_48); gnlProkkaGGJFMMIN_49 (original name was: gnl|Prokka|GGJFMMIN_49); gnlProkkaGGJFMMIN_50 (original name was: gnl|Prokka|GGJFMMIN_50); gnlProkkaGGJFMMIN_51 (original name was: gnl|Prokka|GGJFMMIN_51); gnlProkkaGGJFMMIN_54 (original name was: gnl|Prokka|GGJFMMIN_54); gnlProkkaGGJFMMIN_66 (original name was: gnl|Prokka|GGJFMMIN_66); gnlProkkaGGJFMMIN_73 (original name was: gnl|Prokka|GGJFMMIN_73); gnlProkkaGGJFMMIN_84 (original name was: gnl|Prokka|GGJFMMIN_84); gnlProkkaGGJFMMIN_95 (original name was: gnl|Prokka|GGJFMMIN_95); gnlProkkaGGJFMMIN_103 (original name was: gnl|Prokka|GGJFMMIN_103); gnlProkkaGGJFMMIN_104 (original name was: gnl|Prokka|GGJFMMIN_104); gnlProkkaGGJFMMIN_106 (original name was: gnl|Prokka|GGJFMMIN_106); gnlProkkaGGJFMMIN_107 (original name was: gnl|Prokka|GGJFMMIN_107); gnlProkkaGGJFMMIN_108 (original name was: gnl|Prokka|GGJFMMIN_108); gnlProkkaGGJFMMIN_109 (original name was: gnl|Prokka|GGJFMMIN_109); gnlProkkaGGJFMMIN_111 (original name was: gnl|Prokka|GGJFMMIN_111); gnlProkkaGGJFMMIN_112 (original name was: gnl|Prokka|GGJFMMIN_112); gnlProkkaGGJFMMIN_113 (original name was: gnl|Prokka|GGJFMMIN_113); gnlProkkaGGJFMMIN_114 (original name was: gnl|Prokka|GGJFMMIN_114); gnlProkkaGGJFMMIN_115 (original name was: gnl|Prokka|GGJFMMIN_115); gnlProkkaGGJFMMIN_116 (original name was: gnl|Prokka|GGJFMMIN_116); gnlProkkaGGJFMMIN_117 (original name was: gnl|Prokka|GGJFMMIN_117); gnlProkkaGGJFMMIN_118 (original name was: gnl|Prokka|GGJFMMIN_118); gnlProkkaGGJFMMIN_119 (original name was: gnl|Prokka|GGJFMMIN_119); gnlProkkaGGJFMMIN_120 (original name was: gnl|Prokka|GGJFMMIN_120); gnlProkkaGGJFMMIN_122 (original name was: gnl|Prokka|GGJFMMIN_122); gnlProkkaGGJFMMIN_123 (original name was: gnl|Prokka|GGJFMMIN_123); gnlProkkaGGJFMMIN_124 (original name was: gnl|Prokka|GGJFMMIN_124); gnlProkkaGGJFMMIN_125 (original name was: gnl|Prokka|GGJFMMIN_125); gnlProkkaGGJFMMIN_126 (original name was: gnl|Prokka|GGJFMMIN_126); gnlProkkaGGJFMMIN_127 (original name was: gnl|Prokka|GGJFMMIN_127); gnlProkkaGGJFMMIN_128 (original name was: gnl|Prokka|GGJFMMIN_128); gnlProkkaGGJFMMIN_129 (original name was: gnl|Prokka|GGJFMMIN_129); gnlProkkaGGJFMMIN_130 (original name was: gnl|Prokka|GGJFMMIN_130); gnlProkkaGGJFMMIN_131 (original name was: gnl|Prokka|GGJFMMIN_131); gnlProkkaGGJFMMIN_133 (original name was: gnl|Prokka|GGJFMMIN_133); gnlProkkaGGJFMMIN_134 (original name was: gnl|Prokka|GGJFMMIN_134); gnlProkkaGGJFMMIN_135 (original name was: gnl|Prokka|GGJFMMIN_135); gnlProkkaGGJFMMIN_136 (original name was: gnl|Prokka|GGJFMMIN_136); gnlProkkaGGJFMMIN_137 (original name was: gnl|Prokka|GGJFMMIN_137); gnlProkkaGGJFMMIN_138 (original name was: gnl|Prokka|GGJFMMIN_138); gnlProkkaGGJFMMIN_139 (original name was: gnl|Prokka|GGJFMMIN_139); gnlProkkaGGJFMMIN_140 (original name was: gnl|Prokka|GGJFMMIN_140); gnlProkkaGGJFMMIN_141 (original name was: gnl|Prokka|GGJFMMIN_141); gnlProkkaGGJFMMIN_142 (original name was: gnl|Prokka|GGJFMMIN_142)

Compact view

gnlProkkaGGJFMMIN_14 - Region 1 - RiPP-like

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Location: 2,173 - 8,388 nt. (total: 6,216 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGGJFMMIN_23 - Region 1 - lassopeptide

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Location: 1 - 5,112 nt. (total: 5,112 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

gnlProkkaGGJFMMIN_30 - Region 1 - T3PKS

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Location: 10,381 - 51,538 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGGJFMMIN_41 - Region 1 - RiPP-like

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Location: 1 - 1,818 nt. (total: 1,818 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGGJFMMIN_42 - Region 1 - RiPP-like

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Location: 64,395 - 74,443 nt. (total: 10,049 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.