GCA_002254035.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIIICJCIH_17 (original name was: gnl|Prokka|IIICJCIH_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	RiPP-like	1	4,387	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	16%

gnlProkkaIIICJCIH_100 (original name was: gnl|Prokka|IIICJCIH_100)

Region	Type	From	To	Most similar known cluster		Similarity
Region 58.1	RiPP-like	1	7,397

gnlProkkaIIICJCIH_116 (original name was: gnl|Prokka|IIICJCIH_116)

Region	Type	From	To	Most similar known cluster		Similarity
Region 72.1	T3PKS	65,793	106,950

gnlProkkaIIICJCIH_143 (original name was: gnl|Prokka|IIICJCIH_143)

Region	Type	From	To	Most similar known cluster		Similarity
Region 97.1	RiPP-like	1	6,819

No secondary metabolite regions were found in these records:: gnlProkkaIIICJCIH_3 (original name was: gnl|Prokka|IIICJCIH_3); gnlProkkaIIICJCIH_4 (original name was: gnl|Prokka|IIICJCIH_4); gnlProkkaIIICJCIH_5 (original name was: gnl|Prokka|IIICJCIH_5); gnlProkkaIIICJCIH_6 (original name was: gnl|Prokka|IIICJCIH_6); gnlProkkaIIICJCIH_7 (original name was: gnl|Prokka|IIICJCIH_7); gnlProkkaIIICJCIH_8 (original name was: gnl|Prokka|IIICJCIH_8); gnlProkkaIIICJCIH_9 (original name was: gnl|Prokka|IIICJCIH_9); gnlProkkaIIICJCIH_10 (original name was: gnl|Prokka|IIICJCIH_10); gnlProkkaIIICJCIH_11 (original name was: gnl|Prokka|IIICJCIH_11); gnlProkkaIIICJCIH_12 (original name was: gnl|Prokka|IIICJCIH_12); gnlProkkaIIICJCIH_13 (original name was: gnl|Prokka|IIICJCIH_13); gnlProkkaIIICJCIH_14 (original name was: gnl|Prokka|IIICJCIH_14); gnlProkkaIIICJCIH_15 (original name was: gnl|Prokka|IIICJCIH_15); gnlProkkaIIICJCIH_16 (original name was: gnl|Prokka|IIICJCIH_16); gnlProkkaIIICJCIH_18 (original name was: gnl|Prokka|IIICJCIH_18); gnlProkkaIIICJCIH_19 (original name was: gnl|Prokka|IIICJCIH_19); gnlProkkaIIICJCIH_20 (original name was: gnl|Prokka|IIICJCIH_20); gnlProkkaIIICJCIH_21 (original name was: gnl|Prokka|IIICJCIH_21); gnlProkkaIIICJCIH_22 (original name was: gnl|Prokka|IIICJCIH_22); gnlProkkaIIICJCIH_23 (original name was: gnl|Prokka|IIICJCIH_23); gnlProkkaIIICJCIH_25 (original name was: gnl|Prokka|IIICJCIH_25); gnlProkkaIIICJCIH_26 (original name was: gnl|Prokka|IIICJCIH_26); gnlProkkaIIICJCIH_27 (original name was: gnl|Prokka|IIICJCIH_27); gnlProkkaIIICJCIH_28 (original name was: gnl|Prokka|IIICJCIH_28); gnlProkkaIIICJCIH_29 (original name was: gnl|Prokka|IIICJCIH_29); gnlProkkaIIICJCIH_30 (original name was: gnl|Prokka|IIICJCIH_30); gnlProkkaIIICJCIH_31 (original name was: gnl|Prokka|IIICJCIH_31); gnlProkkaIIICJCIH_32 (original name was: gnl|Prokka|IIICJCIH_32); gnlProkkaIIICJCIH_33 (original name was: gnl|Prokka|IIICJCIH_33); gnlProkkaIIICJCIH_34 (original name was: gnl|Prokka|IIICJCIH_34); gnlProkkaIIICJCIH_36 (original name was: gnl|Prokka|IIICJCIH_36); gnlProkkaIIICJCIH_37 (original name was: gnl|Prokka|IIICJCIH_37); gnlProkkaIIICJCIH_38 (original name was: gnl|Prokka|IIICJCIH_38); gnlProkkaIIICJCIH_39 (original name was: gnl|Prokka|IIICJCIH_39); gnlProkkaIIICJCIH_40 (original name was: gnl|Prokka|IIICJCIH_40); gnlProkkaIIICJCIH_41 (original name was: gnl|Prokka|IIICJCIH_41); gnlProkkaIIICJCIH_42 (original name was: gnl|Prokka|IIICJCIH_42); gnlProkkaIIICJCIH_43 (original name was: gnl|Prokka|IIICJCIH_43); gnlProkkaIIICJCIH_44 (original name was: gnl|Prokka|IIICJCIH_44); gnlProkkaIIICJCIH_45 (original name was: gnl|Prokka|IIICJCIH_45); gnlProkkaIIICJCIH_47 (original name was: gnl|Prokka|IIICJCIH_47); gnlProkkaIIICJCIH_48 (original name was: gnl|Prokka|IIICJCIH_48); gnlProkkaIIICJCIH_49 (original name was: gnl|Prokka|IIICJCIH_49); gnlProkkaIIICJCIH_50 (original name was: gnl|Prokka|IIICJCIH_50); gnlProkkaIIICJCIH_51 (original name was: gnl|Prokka|IIICJCIH_51); gnlProkkaIIICJCIH_52 (original name was: gnl|Prokka|IIICJCIH_52); gnlProkkaIIICJCIH_53 (original name was: gnl|Prokka|IIICJCIH_53); gnlProkkaIIICJCIH_54 (original name was: gnl|Prokka|IIICJCIH_54); gnlProkkaIIICJCIH_55 (original name was: gnl|Prokka|IIICJCIH_55); gnlProkkaIIICJCIH_58 (original name was: gnl|Prokka|IIICJCIH_58); gnlProkkaIIICJCIH_66 (original name was: gnl|Prokka|IIICJCIH_66); gnlProkkaIIICJCIH_78 (original name was: gnl|Prokka|IIICJCIH_78); gnlProkkaIIICJCIH_90 (original name was: gnl|Prokka|IIICJCIH_90); gnlProkkaIIICJCIH_97 (original name was: gnl|Prokka|IIICJCIH_97); gnlProkkaIIICJCIH_98 (original name was: gnl|Prokka|IIICJCIH_98); gnlProkkaIIICJCIH_99 (original name was: gnl|Prokka|IIICJCIH_99); gnlProkkaIIICJCIH_102 (original name was: gnl|Prokka|IIICJCIH_102); gnlProkkaIIICJCIH_103 (original name was: gnl|Prokka|IIICJCIH_103); gnlProkkaIIICJCIH_104 (original name was: gnl|Prokka|IIICJCIH_104); gnlProkkaIIICJCIH_105 (original name was: gnl|Prokka|IIICJCIH_105); gnlProkkaIIICJCIH_106 (original name was: gnl|Prokka|IIICJCIH_106); gnlProkkaIIICJCIH_107 (original name was: gnl|Prokka|IIICJCIH_107); gnlProkkaIIICJCIH_108 (original name was: gnl|Prokka|IIICJCIH_108); gnlProkkaIIICJCIH_109 (original name was: gnl|Prokka|IIICJCIH_109); gnlProkkaIIICJCIH_110 (original name was: gnl|Prokka|IIICJCIH_110); gnlProkkaIIICJCIH_111 (original name was: gnl|Prokka|IIICJCIH_111); gnlProkkaIIICJCIH_113 (original name was: gnl|Prokka|IIICJCIH_113); gnlProkkaIIICJCIH_114 (original name was: gnl|Prokka|IIICJCIH_114); gnlProkkaIIICJCIH_115 (original name was: gnl|Prokka|IIICJCIH_115); gnlProkkaIIICJCIH_117 (original name was: gnl|Prokka|IIICJCIH_117); gnlProkkaIIICJCIH_118 (original name was: gnl|Prokka|IIICJCIH_118); gnlProkkaIIICJCIH_119 (original name was: gnl|Prokka|IIICJCIH_119); gnlProkkaIIICJCIH_120 (original name was: gnl|Prokka|IIICJCIH_120); gnlProkkaIIICJCIH_121 (original name was: gnl|Prokka|IIICJCIH_121); gnlProkkaIIICJCIH_122 (original name was: gnl|Prokka|IIICJCIH_122); gnlProkkaIIICJCIH_124 (original name was: gnl|Prokka|IIICJCIH_124); gnlProkkaIIICJCIH_125 (original name was: gnl|Prokka|IIICJCIH_125); gnlProkkaIIICJCIH_126 (original name was: gnl|Prokka|IIICJCIH_126); gnlProkkaIIICJCIH_127 (original name was: gnl|Prokka|IIICJCIH_127); gnlProkkaIIICJCIH_128 (original name was: gnl|Prokka|IIICJCIH_128); gnlProkkaIIICJCIH_129 (original name was: gnl|Prokka|IIICJCIH_129); gnlProkkaIIICJCIH_130 (original name was: gnl|Prokka|IIICJCIH_130); gnlProkkaIIICJCIH_131 (original name was: gnl|Prokka|IIICJCIH_131); gnlProkkaIIICJCIH_132 (original name was: gnl|Prokka|IIICJCIH_132); gnlProkkaIIICJCIH_133 (original name was: gnl|Prokka|IIICJCIH_133); gnlProkkaIIICJCIH_135 (original name was: gnl|Prokka|IIICJCIH_135); gnlProkkaIIICJCIH_136 (original name was: gnl|Prokka|IIICJCIH_136); gnlProkkaIIICJCIH_137 (original name was: gnl|Prokka|IIICJCIH_137); gnlProkkaIIICJCIH_138 (original name was: gnl|Prokka|IIICJCIH_138); gnlProkkaIIICJCIH_139 (original name was: gnl|Prokka|IIICJCIH_139); gnlProkkaIIICJCIH_140 (original name was: gnl|Prokka|IIICJCIH_140); gnlProkkaIIICJCIH_141 (original name was: gnl|Prokka|IIICJCIH_141); gnlProkkaIIICJCIH_142 (original name was: gnl|Prokka|IIICJCIH_142); gnlProkkaIIICJCIH_144 (original name was: gnl|Prokka|IIICJCIH_144)

Compact view

gnlProkkaIIICJCIH_17 - Region 1 - RiPP-like

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Location: 1 - 4,387 nt. (total: 4,387 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaIIICJCIH_100 - Region 1 - RiPP-like

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Location: 1 - 7,397 nt. (total: 7,397 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIIICJCIH_116 - Region 1 - T3PKS

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Location: 65,793 - 106,950 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIIICJCIH_143 - Region 1 - RiPP-like

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Location: 1 - 6,819 nt. (total: 6,819 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.